RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049904

Ensembl transcript IDs: ENSMUST00000059319.8

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TTGGCATTGCCTCCATGGGGATTTCAGAGCTGGAGGACACACCCCAGCACGTATCACTCTCTCACTTCCTaGTCCTCTTGTATCATCTTT +
Preference number: 2 (lower is better)
Translates to: LALPPWGFQSWRTHPSTYHSLTS*SSCIIF
Trigger: AAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTG...ATACGTGCTGGGGTGTGTCCTCCAGCTCTGAAATCCCCATGGAGGCAATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
3UTR-3UTR TCA 90 bp CTTGGTGAGATTCCACTGAACAAAGCAATTTCGTCTGAAGTGCCATACATTTCTATAGAAACGGTGGTATaGAACTGCCAACAGACTCAT +
Preference number: 2 (lower is better)
Translates to: LGEIPLNKAISSEVPYISIETVV*NCQQTH
Trigger: ATGAGTCTGTTGGCAGTTTCATACCACCGTTTCTAT...AGAAATGTATGGCACTTCAGACGAAATTGCTTTGTTCAGTGGAATCTCACCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
3UTR CCA 72 bp GGCCCGACTCAGATGTCCTGTCACTCTCTCACTTCCTaGTCCTCTTGTATCATCTTTCTGTCGTTCACCACT +
Preference number: 3 (lower is better)
Translates to: GPTQMSCHSLTS*SSCIIFLSFTT
Trigger: AGTGGTGAACGACAGAAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGAGTCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
3UTR TCA 72 bp TCCTGGAGGGTGTTGTCACACTTGGTGAGATTCCACTaGACAAAGCAATTTCGTCTGAAGTGCCATACATTT +
Preference number: 3 (lower is better)
Translates to: SWRVLSHLVRFH*TKQFRLKCHTF
Trigger: AAATGTATGGCACTTCAGACGAAATTGCTTTGTTCAGTGGAATCTCACCAAGTGTGACAACACCCTCCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
3UTR TCA 72 bp CAGATTATAATCAGAAATATTATAGAAACGGTGGTATaGAACTGCCAACAGACTCATCCAACATCAGGAATA +
Preference number: 3 (lower is better)
Translates to: QIIIRNIIETVV*NCQQTHPTSGI
Trigger: TATTCCTGATGTTGGATGAGTCTGTTGGCAGTTTCATACCACCGTTTCTATAATATTTCTGATTATAATCTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CCA 90 bp GGGCCCGACTCAGATGTCCTGTCACTCTCTCACTTCCTGGTCCTCTTGTATCATTCAAAGTCCTGGAGGTaGAAACGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPDSDVLSLSHFLVLLYHSKSWR*KRAASW
Trigger: CCAGCTGGCAGCCCGTTTCCACCTCCAGGACTTTGA...ATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGAGTCGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR GCA 90 bp CTCTCACTTCCTGGTCCTCTTGTATCATCTTTCTGTCGTTCACCACTCAGCATATGGACTCTGGCCCGGTaGGGCTGGAGTCGCCGAACA +
Preference number: 4 (lower is better)
Translates to: LSLPGPLVSSFCRSPLSIWTLAR*GWSRRT
Trigger: TGTTCGGCGACTCCAGCCGCACCGGGCCAGAGTCCA...TATGCTGAGTGGTGAACGACAGAAAGATGATACAAGAGGACCAGGAAGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CCA 90 bp CTGACTCCCCCTGAGCTAGGACATGTCCTGGAGGGTGTTGTCACACTTGGTGAGTCTGCAAGGCCAGGCTaGAGACCATTTCATTATCGG +
Preference number: 4 (lower is better)
Translates to: LTPPELGHVLEGVVTLGESARPG*RPFHYR
Trigger: CCGATAATGAAATGGTCTCCAGCCTGGCCTTGCAGA...CTCACCAAGTGTGACAACACCCTCCAGGACATGTCCTAGCTCAGGGGGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR TCA 90 bp CATTGCCTCCATGGGGATTTCAGAGCTGGAGGACACACCCCAGCACGTATGTCCTACAGCTGCACTGCTTaGAGACAGCTGATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HCLHGDFRAGGHTPARMSYSCTA*RQLIKV
Trigger: GACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTA...GGACATACGTGCTGGGGTGTGTCCTCCAGCTCTGAAATCCCCATGGAGGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CCA 90 bp CATTGCCTCCATGGGGATTTCAGAGCTGGAGGACACACCCCAGCACGTATGTCCAGTAGTCAGGCAAGATaGAATACTTCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HCLHGDFRAGGHTPARMSSSQAR*NTSGAA
Trigger: TGCTGCACCTGAAGTATTCCATCTTGCCTGACTACT...GGACATACGTGCTGGGGTGTGTCCTCCAGCTCTGAAATCCCCATGGAGGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CCA 90 bp CTTGGTGAGATTCCACTGAACAAAGCAATTTCGTCTGAAGTGCCATACATTTCTCGCATCACTGGACTCTaGCCCGGTGCGGCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGEIPLNKAISSEVPYISRITGL*PGAAGV
Trigger: GACTCCAGCCGCACCGGGCCAGAGTCCAGTGATGCG...AGAAATGTATGGCACTTCAGACGAAATTGCTTTGTTCAGTGGAATCTCACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR GCA 90 bp GACTCAGATGTCCTGTCACTCTCTCACTTCCTGGTCCTCTTGTATCATCTTTCTGGTGCAGCATCACAATaGAGCTCACCCACCACAGTG +
Preference number: 4 (lower is better)
Translates to: DSDVLSLSHFLVLLYHLSGAASQ*SSPTTV
Trigger: CACTGTGGTGGGTGAGCTGCATTGTGATGCTGCACC...AGAAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR TCA 90 bp CTCTCACTTCCTGGTCCTCTTGTATCATCTTTCTGTCGTTCACCACTCAGCATAGGGCTGCCAGCTGGTTaGCCATTTTCTTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLPGPLVSSFCRSPLSIGLPAG*PFSLGS
Trigger: TGACCCTAAAGAAAATGGTCAACCAGCTGGCAGCCC...TATGCTGAGTGGTGAACGACAGAAAGATGATACAAGAGGACCAGGAAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR GCA 90 bp GACTCAGATGTCCTGTCACTCTCTCACTTCCTGGTCCTCTTGTATCATCTTTCTAGGATTAAAGGCAACTaGAGTAGAAGGCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DSDVLSLSHFLVLLYHLSRIKGN*SRRLRS
Trigger: GCTTCTGAGCCTTCTACTGCAGTTGCCTTTAATCCT...AGAAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
3UTR CAA 72 bp TCAGATGTCCTGTCACTCTCTCACTTCCTGGTCCTCTaGTATCATCTTTCTGTCGTTCACCACTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: SDVLSLSHFLVL*YHLSVVHHSAY
Trigger: ATATGCTGAGTGGTGAACGACAGAAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR GCA 90 bp GTCACACTTGGTGAGATTCCACTGAACAAAGCAATTTCGTCTGAAGTGCCATACATGGAATACTTCAGGTaGAGCATCACAATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VTLGEIPLNKAISSEVPYMEYFR*SITMQL
Trigger: GAGCTGCATTGTGATGCTGCACCTGAAGTATTCCAT...GTATGGCACTTCAGACGAAATTGCTTTGTTCAGTGGAATCTCACCAAGTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR GCA 90 bp TCTCACTTCCTGGTCCTCTTGTATCATCTTTCTGTCGTTCACCACTCAGCATATGAAGATGATATGTATTaGTTTCTCCAGGGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SHFLVLLYHLSVVHHSAYEDDMY*FLQGQI
Trigger: AATCTGCCCCTGGAGAAAGCAATACATATCATCTTC...ATATGCTGAGTGGTGAACGACAGAAAGATGATACAAGAGGACCAGGAAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CCA 90 bp GACTCAGATGTCCTGTCACTCTCTCACTTCCTGGTCCTCTTGTATCATCTTTCTAATGCTGAGATGACTTaGAAAGTAAGAAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: DSDVLSLSHFLVLLYHLSNAEMT*KVRKMV
Trigger: CACCATCTTTCTTACTTTCCAAGTCATCTCAGCATT...AGAAAGATGATACAAGAGGACCAGGAAGTGAGAGAGTGACAGGACATCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 90 bp GTGCATTGTCTTACCCTCCTTACAGCTGCACTGCTTGAAGACAGCTaGTCAAAGTCCTGGAGGTGGAAACGGGCTGCCAGCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: VHCLTLLTAALLEDS*SKSWRWKRAASWLT
Trigger: GGTCAACCAGCTGGCAGCCCGTTTCCACCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAAGGAGGGTAAGACAATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 90 bp GAGCTCTTCCGTGCATTGTCTTACCCTCCTTACAGCTGCACTGCTTaGAGACAGCTGATCAAAGTCCTGGAGGTGGAAACGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ELFRALSYPPYSCTA*RQLIKVLEVETGCQ
Trigger: CTGGCAGCCCGTTTCCACCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAAGGAGGGTAAGACAATGCACGGAAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 90 bp AGAAGGCTCAGAAGCCAAAAGCCAGCTAGCTCAGGAACCTTCTCCTaGAGGTTACCCATGCAGCCCAGGTATAACCGGATCGCTTCAATC +
Preference number: 5 (lower is better)
Translates to: RRLRSQKPASSGTFS*RLPMQPRYNRIASI
Trigger: GATTGAAGCGATCCGGTTATACCTGGGCTGCATGGGTAACCTTCAGGAGAAGGTTCCTGAGCTAGCTGGCTTTTGGCTTCTGAGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS GCA 90 bp TTCCTTAGGCCATCATTAAGGAGCAAGAAAAGGATTAAAGGCAACTaGAGTAGAAGGCTCAGAAGCCAAAAGCCAGCTAGCTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: FLRPSLRSKKRIKGN*SRRLRSQKPASSGT
Trigger: GGTTCCTGAGCTAGCTGGCTTTTGGCTTCTGAGCCTTCTACTGCAGTTGCCTTTAATCCTTTTCTTGCTCCTTAATGATGGCCTAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS CCA 90 bp GGAATACTTCAGGTGCAGCATCACAATGCAGCTCACCCACCACAGTaGGAAAAAGTAAGAGTTAAAATAAAGGGACATCTGCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GILQVQHHNAAHPPQ*EKVRVKIKGHLQGQ
Trigger: CTGGCCTTGCAGATGTCCCTTTATTTTAACTCTTACTTTTTCCCACTGTGGTGGGTGAGCTGCATTGTGATGCTGCACCTGAAGTATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS-3UTR CAA 90 bp CTGGAGGGTGTTGTCACACTTGGTGAGATTCCACTGAACAAAGCAATTTCGTCTTTACAGCTGCACTGCTaGAAGACAGCTGATCAAAGT +
Preference number: 5 (lower is better)
Translates to: LEGVVTLGEIPLNKAISSLQLHC*KTADQS
Trigger: ACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAA...AGACGAAATTGCTTTGTTCAGTGGAATCTCACCAAGTGTGACAACACCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS CAA 72 bp GTGCGGCTGGAGTCGCCGAACACGGTGAGGCTGAGGTaGCTCAGGCGCTGGCGAACAGGGTCCGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VRLESPNTVRLR*LRRWRTGSGSS
Trigger: GGAGCTGCCGGACCCTGTTCGCCAGCGCCTGAGCAACCTCAGCCTCACCGTGTTCGGCGACTCCAGCCGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS CCA 72 bp GGAGACCATTTCATTATCGGCCGCATCACTGGACTCTaGCCCGGTGCGGCTGGAGTCGCCGAACACGGTGAG +
Preference number: 6 (lower is better)
Translates to: GDHFIIGRITGL*PGAAGVAEHGE
Trigger: CTCACCGTGTTCGGCGACTCCAGCCGCACCGGGCCAGAGTCCAGTGATGCGGCCGATAATGAAATGGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 72 bp CTTACCCTCCTTACAGCTGCACTGCTTGAAGACAGCTaGTCAAAGTCCTGGAGGTGGAAACGGGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: LTLLTAALLEDS*SKSWRWKRAAS
Trigger: GCTGGCAGCCCGTTTCCACCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAAGGAGGGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 72 bp AGAAGCCAAAAGCCAGCTAGCTCAGGAACCTTCTCCTaGAGGTTACCCATGCAGCCCAGGTATAACCGGATC +
Preference number: 6 (lower is better)
Translates to: RSQKPASSGTFS*RLPMQPRYNRI
Trigger: GATCCGGTTATACCTGGGCTGCATGGGTAACCTTCAGGAGAAGGTTCCTGAGCTAGCTGGCTTTTGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS GCA 72 bp CAGCTAGCTCAGGAACCTTCTCCTGAAGGTTACCCATaGAGCCCAGGTATAACCGGATCGCTTCAATCAAGG +
Preference number: 6 (lower is better)
Translates to: QLAQEPSPEGYP*SPGITGSLQSR
Trigger: CCTTGATTGAAGCGATCCGGTTATACCTGGGCTGCATGGGTAACCTTCAGGAGAAGGTTCCTGAGCTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS TCA 72 bp CGTGCATTGTCTTACCCTCCTTACAGCTGCACTGCTTaGAGACAGCTGATCAAAGTCCTGGAGGTGGAAACG +
Preference number: 6 (lower is better)
Translates to: RALSYPPYSCTA*RQLIKVLEVET
Trigger: CGTTTCCACCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAAGGAGGGTAAGACAATGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8
CDS GCA 72 bp CCATCATTAAGGAGCAAGAAAAGGATTAAAGGCAACTaGAGTAGAAGGCTCAGAAGCCAAAAGCCAGCTAGC +
Preference number: 6 (lower is better)
Translates to: PSLRSKKRIKGN*SRRLRSQKPAS
Trigger: GCTAGCTGGCTTTTGGCTTCTGAGCCTTCTACTGCAGTTGCCTTTAATCCTTTTCTTGCTCCTTAATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059319.8