Pregenerated sensors for TMEM168 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029569Ensembl transcript IDs: ENSMUST00000031554.9, ENSMUST00000149123.3
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAATTGTCCATTaGCCACTCCAGAGCACAGACAACTGTGTTTCTTTTCATTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FSNGCLENKALGIVH*PLQSTDNCVSFHWR Trigger: TCTCCAATGAAAAGAAACACAGTTGTCTGTGCTCTGGAGTGGCCAATGGACAATTCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CCA 90 bp | CAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTaGGGCCAAACCTATATGAATCACACACATGAAAGAATCTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: QVSSCSKYLYFCKQS*GQTYMNHTHERISY Trigger: GTAGGAGATTCTTTCATGTGTGTGATTCATATAGGTTTGGCCCCAGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR TCA 90 bp | ATCCGTTACCTTCCCTCTCTGGGCATGGAAAAATGGCTTCAACGGTaGGAAGTCACCATGGTAACAAAGTCTAATCTCCACTTTAATTAT | + |
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Preference number: 1 (lower is better) Translates to: IRYLPSLGMEKWLQR*EVTMVTKSNLHFNY Trigger: ATAATTAAAGTGGAGATTAGACTTTGTTACCATGGTGACTTCTCACCGTTGAAGCCATTTTTCCATGCCCAGAGAGGGAAGGTAACGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR TCA 90 bp | AATTGGAAGGGGACAGGAAGTGACTTACCTCTTAAGGAGATATCCTaGTCAGCGCCTACTTTACTCCAACAAAACACTGAATTAAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NWKGTGSDLPLKEIS*SAPTLLQQNTELKF Trigger: AAACTTTAATTCAGTGTTTTGTTGGAGTAAAGTAGGCGCTGATCAGGATATCTCCTTAAGAGGTAAGTCACTTCCTGTCCCCTTCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR TCA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTGGGGCCAAACCTATATaGATCACACACATGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSGAKPI*ITHMKE Trigger: TTCTTTCATGTGTGTGATTCATATAGGTTTGGCCCC...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR CCA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTTTAGGAATTGTCCATTaGCCACTCCAGAGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: IMSRSLPAPSIYTSANSPLGIVH*PLQSTD Trigger: GTCTGTGCTCTGGAGTGGCCAATGGACAATTCCTAA...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CAA 90 bp | CCCTCACTAACCATGAAGGAACACTTTGTAGCATGTAAGCTCTTATaGTTACCTACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSLTMKEHFVACKLL*LPTLTMLSSQRQLG Trigger: CCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTAGGTAACAATAAGAGCTTACATGCTACAAAGTGTTCCTTCATGGTTAGTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CAA 90 bp | CTCTTATTGTTACCTACATTAACAATGCTTTCATCTCAAAGGCAGTaGGGGCTTTTCTGCTGTACTGTAAAGGTCATAGCCAAGACATCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLPTLTMLSSQRQ*GLFCCTVKVIAKTS Trigger: AGATGTCTTGGCTATGACCTTTACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTAGGTAACAATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CAA 90 bp | TGTCCATTGGCCACTCCAGAGCACAGACAACTGTGTTTCTTTTCATaGGAGACAAATGGAAAGTTATTTGAAAGTGCACTGTTACTTTTA | + |
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Preference number: 2 (lower is better) Translates to: CPLATPEHRQLCFFS*ETNGKLFESALLLL Trigger: TAAAAGTAACAGTGCACTTTCAAATAACTTTCCATTTGTCTCCAATGAAAAGAAACACAGTTGTCTGTGCTCTGGAGTGGCCAATGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGACAGTTGGGGCTTTTCTaGTGTACTGTAAAGGTCATA | + |
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Preference number: 2 (lower is better) Translates to: AVYRVVSYGKEERNCRIRQLGLF*CTVKVI Trigger: TATGACCTTTACAGTACAGCAGAAAAGCCCCAACTG...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGTAGAAAATGGTAGATaGATCCGTTACCTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AVYRVVSYGKEERNCRIRVENGR*IRYLPS Trigger: AGAGGGAAGGTAACGGATGCATCTACCATTTTCTAC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CCA 72 bp | ATGGTAGATGCATCCGTTACCTTCCCTCTCTGGGCATaGAAAAATGGCTTCAACGGTGAGAAGTCACCATGG | + |
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Preference number: 3 (lower is better) Translates to: MVDASVTFPLWA*KNGFNGEKSPW Trigger: CCATGGTGACTTCTCACCGTTGAAGCCATTTTTCCATGCCCAGAGAGGGAAGGTAACGGATGCATCTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR TCA 72 bp | CTTCCCTCTCTGGGCATGGAAAAATGGCTTCAACGGTaGGAAGTCACCATGGTAACAAAGTCTAATCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPSLGMEKWLQR*EVTMVTKSNLH Trigger: GTGGAGATTAGACTTTGTTACCATGGTGACTTCTCACCGTTGAAGCCATTTTTCCATGCCCAGAGAGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR GCA 72 bp | ACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTaGTGTACTGTAAAGGTCATAGCCAAGACATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TMLSSQRQLGLF*CTVKVIAKTSG Trigger: CCCAGATGTCTTGGCTATGACCTTTACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR TCA 72 bp | GGGACAGGAAGTGACTTACCTCTTAAGGAGATATCCTaGTCAGCGCCTACTTTACTCCAACAAAACACTGAA | + |
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Preference number: 3 (lower is better) Translates to: GTGSDLPLKEIS*SAPTLLQQNTE Trigger: TTCAGTGTTTTGTTGGAGTAAAGTAGGCGCTGATCAGGATATCTCCTTAAGAGGTAAGTCACTTCCTGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CCA 72 bp | GGGTGCCTAGAAAATAAGGCATTAGGAATTGTCCATTaGCCACTCCAGAGCACAGACAACTGTGTTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: GCLENKALGIVH*PLQSTDNCVSF Trigger: AAAAGAAACACAGTTGTCTGTGCTCTGGAGTGGCCAATGGACAATTCCTAATGCCTTATTTTCTAGGCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR CAA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTTCTCTTAAAACACACTaGTCTGGTCTACATTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSSLKTH*SGLHSL Trigger: TAGAGAATGTAGACCAGACAAGTGTGTTTTAAGAGA...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR GCA 72 bp | ATGTCAGTTTTCAAGTCATTGGTAGAAAATGGTAGATaGATCCGTTACCTTCCCTCTCTGGGCATGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: MSVFKSLVENGR*IRYLPSLGMEK Trigger: TTTTTCCATGCCCAGAGAGGGAAGGTAACGGATGCATCTACCATTTTCTACCAATGACTTGAAAACTGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CCA 72 bp | TCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTaGGGCCAAACCTATATGAATCACACACATGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SCSKYLYFCKQS*GQTYMNHTHER Trigger: TCTTTCATGTGTGTGATTCATATAGGTTTGGCCCCAGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGATCATCTCAAAGGCAGTaGGGGCTTTTCTGCTGTACT | + |
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Preference number: 3 (lower is better) Translates to: AVYRVVSYGKEERNCRIRSSQRQ*GLFCCT Trigger: AGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGA...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTTGGCGGAAGCAGTGTTaGCTGGCCATCAGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSWRKQC*LAIRAA Trigger: TGCAGCCCTGATGGCCAGCCAACACTGCTTCCGCCA...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR TCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTGAGGGCCCACTCTCCTaGGCCATGGGTGTGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCEGPLS*AMGVST Trigger: AGTGGACACACCCATGGCTCAGGAGAGTGGGCCCTC...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR GCA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTACACGGCCCTCACTGTaGGCCCCTTCTCAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IMSRSLPAPSIYTSANSPTRPSL*APSQSS Trigger: GCTGGACTGAGAAGGGGCGCACAGTGAGGGCCGTGT...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTGGCGGAAGCAGTGTTaGCTGGCCATCAGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQWRKQC*LAIRAA Trigger: TGCAGCCCTGATGGCCAGCCAACACTGCTTCCGCCA...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR TCA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAGCCAGCTCAGCTCCCTaGACTGCAACATACTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLVWSTFSNGCLENKALGASSAP*TATYWS Trigger: TGACCAGTATGTTGCAGTTCAGGGAGCTGAGCTGGC...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGGGAAGCAGTGTTGGCTaGCCATCAGGGCTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQGSSVG*PSGLQK Trigger: CTTCTGCAGCCCTGATGGCCAGCCAACACTGCTTCC...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR TCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGAGGGCCCACTCTCCTaGGCCATGGGTGTGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIREGPLS*AMGVST Trigger: AGTGGACACACCCATGGCTCAGGAGAGTGGGCCCTC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR TCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTGCCAGCTCAGCTCCCTaGACTGCAACATACTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCASSAP*TATYWS Trigger: TGACCAGTATGTTGCAGTTCAGGGAGCTGAGCTGGC...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR GCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAACACGGCCCTCACTGTaGGCCCCTTCTCAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRTRPSL*APSQSS Trigger: GCTGGACTGAGAAGGGGCGCACAGTGAGGGCCGTGT...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTAGAGCCCATGAGCCATaGACTCCAGCGGCAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCRAHEP*TPAARQ Trigger: TTGTCTTGCCGCTGGAGTCCATGGCTCATGGGCTCT...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAGTAACATCCAGTGCTTaGCCACATCGCTTCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TLVWSTFSNGCLENKALGVTSSA*PHRFLS Trigger: CGACAGGAAGCGATGTGGCCAAGCACTGGATGTTAC...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTAAGACAGCCCACTTGTaGAATAGTCACATCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSKTAHL*NSHIHR Trigger: CCTATGGATGTGACTATTCCACAAGTGGGCTGTCTT...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTGTAACATCCAGTGCTTaGCCACATCGCTTCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCVTSSA*PHRFLS Trigger: CGACAGGAAGCGATGTGGCCAAGCACTGGATGTTAC...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR GCA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAAAGTGTAACATCCAGTaGTTGGCCACATCGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLVWSTFSNGCLENKALGKCNIQ*LATSLP Trigger: AGGAAGCGATGTGGCCAAGCACTGGATGTTACACTT...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGAAAGTCACCCAGCTGTaGCGGGTCAGCTTCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQKVTQL*RVSFFN Trigger: ATTGAAGAAGCTGACCCGCCACAGCTGGGTGACTTT...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTAAAGTCACCCAGCTGTaGCGGGTCAGCTTCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: IMSRSLPAPSIYTSANSPKVTQL*RVSFFN Trigger: ATTGAAGAAGCTGACCCGCCACAGCTGGGTGACTTT...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR GCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGGCACAGAAAGTCTCCTaGAAATTCTCCCACGATGCA | + |
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Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQAQKVS*KFSHDA Trigger: TGCATCGTGGGAGAATTTGCAGGAGACTTTCTGTGC...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS-3UTR GCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTAAGTGTAACATCCAGTaGTTGGCCACATCGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCKCNIQ*LATSLP Trigger: AGGAAGCGATGTGGCCAAGCACTGGATGTTACACTT...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAAGAGCCCATGAGCCATaGACTCCAGCGGCAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRRAHEP*TPAARQ Trigger: TTGTCTTGCCGCTGGAGTCCATGGCTCATGGGCTCT...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR TCA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTCCACCTCTCAGTTACTaGAAGTCCACTAAAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSPPLSY*KSTKIN Trigger: ATTTATTTTAGTGGACTTTCAGTAACTGAGAGGTGG...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS-3UTR TCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTTCCCTTTGGATGCCATaGTTCTGTCAAGGCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCSLWMP*FCQGYC Trigger: ACAATAGCCTTGACAGAATCATGGCATCCAAAGGGA...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS-3UTR TCA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAGAAATTAAGCAAAAATaGCGCATCCCTTTGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: TLVWSTFSNGCLENKALGEIKQK*RIPLDA Trigger: GGCATCCAAAGGGATGCGTCATTTTTGCTTAATTTC...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS-3UTR GCA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGATACCGCACGGAGGAATaGATGTTCACTTCTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: TLVWSTFSNGCLENKALGYRTEE*MFTSLF Trigger: AAATAGAGAAGTGAACATGCATTCCTCCGTGCGGTA...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS-3UTR CCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTAAGACAGCCCACTTGTaGAATAGTCACATCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCKTAHL*NSHIHR Trigger: CCTATGGATGTGACTATTCCACAAGTGGGCTGTCTT...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| 3UTR CAA 72 bp | TTACCTACATTAACAATGCTTTCATCTCAAAGGCAGTaGGGGCTTTTCTGCTGTACTGTAAAGGTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLTMLSSQRQ*GLFCCTVKVIA Trigger: GGCTATGACCTTTACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR TCA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTTATCTGCCCTGTGGTTaGTATACACTTTATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YINNAFISKAVGAFLLYCYLPCG*YTLYGS Trigger: ACTGCCATAAAGTGTATATCAACCACAGGGCAGATA...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTAGCAGATGTTGTTTGTaGAGTTACAGTTGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSSRCCL*SYSCIL Trigger: TAGAATACAACTGTAACTCCACAAACAACATCTGCT...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGACCAGCGGCAAGACAATaGGAAACATGCTCAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRPAARQ*ETCSRR Trigger: TCTTCTTGAGCATGTTTCTCATTGTCTTGCCGCTGG...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAACGCATCCCTTTGGATaGCATGATTCTGTCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRTHPFG*HDSVKA Trigger: AGCCTTGACAGAATCATGGCATCCAAAGGGATGCGT...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGAATAGTAGAGTATGCTaGCGATCCCAAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQNSRVC*RSQEQR Trigger: TCTTTGTTCTTGGGATCGCCAGCATACTCTACTATT...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR TCA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTACTGGCTGCTTCCATTaGAAAGTAATAGTAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IMSRSLPAPSIYTSANSPTGCFH*KVIVEY Trigger: ATACTCTACTATTACTTTTCAATGGAAGCAGCCAGT...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR GCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTGTAAGCTCAATCATTaGAGTGAAAAGCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQCKLNH*SEKHRK Trigger: CTTTCTGTGCTTTTCACTGCAATGATTGAGCTTACA...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CCA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGGGAAAGCTTTCAGTTTaGAATGCAGAGTATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQGKLSV*NAEYQK Trigger: CTTTTGATACTCTGCATTCCAAACTGAAAGCTTTCC...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGACTGCTCCCAAAATTaGCGTTGCAAGAAGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRDCSQN*RCKKTK Trigger: TTTAGTCTTCTTGCAACGGCAATTTTGGGAGCAGTC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAATCCAAACCAGAGATTaGAGAGACTTAAACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRIQTRD*RDLNWL Trigger: CAGCCAGTTTAAGTCTCTCCAATCTCTGGTTTGGAT...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGGAAAGCTTTCAGTTTaGAATGCAGAGTATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRGKLSV*NAEYQK Trigger: CTTTTGATACTCTGCATTCCAAACTGAAAGCTTTCC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| 3UTR CAA 72 bp | TTAGATCATAGACAATACCCATGGCTGTGTATAGAGTaGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDHRQYPWLCIE*FHMERKKGIVG Trigger: TCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGCCATGGGTATTGTCTATGATCTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAAGCAGATGTTGTTTGTaGAGTTACAGTTGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVYRVVSYGKEERNCRIRSRCCL*SYSCIL Trigger: TAGAATACAACTGTAACTCCACAAACAACATCTGCT...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS GCA 90 bp | TGTAGTCGCTCCAGCGCTTTGACACGCCATACACGGCCCTCACTGTaGGCCCCTTCTCAGTCCAGCAGATGTTGTTTGTGGAGTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRSSALTRHTRPSL*APSQSSRCCLWSYS Trigger: ACTGTAACTCCACAAACAACATCTGCTGGACTGAGAAGGGGCGCACAGTGAGGGCCGTGTATGGCGTGTCAAAGCGCTGGAGCGACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS TCA 90 bp | ACAGAGGTTCCCCCTAAGCAGTTGCCAAGTTCATGGAAGAGCCCATaGGCCATGGACTCCAGCGGCAAGACAATGAGAAACATGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEVPPKQLPSSWKSP*AMDSSGKTMRNMLK Trigger: CTTGAGCATGTTTCTCATTGTCTTGCCGCTGGAGTCCATGGCTCATGGGCTCTTCCATGAACTTGGCAACTGCTTAGGGGGAACCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS GCA 90 bp | TTGCAGACCCAAAAGAGGTTCAGGCCACATAACCAGTTGGCCAAGTaGACTAACGGATACGTAACCCGAGGGAAGTGTAACATCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQTQKRFRPHNQLAK*TNGYVTRGKCNIQC Trigger: GCACTGGATGTTACACTTCCCTCGGGTTACGTATCCGTTAGTGCACTTGGCCAACTGGTTATGTGGCCTGAACCTCTTTTGGGTCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGCTGGCGGAAGCAGTGTaGGCTGGCCATCAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQLAEAV*AGHQGC Trigger: GCAGCCCTGATGGCCAGCCAACACTGCTTCCGCCAG...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS CCA 90 bp | GTTACAGTTGTATTCTACCCAGTCTCTAGTAAAGTCACCCAGCTGTaGCGGGTCAGCTTCTTCAATATCTACTGTCTTCGCCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVVFYPVSSKVTQL*RVSFFNIYCLRQLS Trigger: GCTGAGCTGGCGAAGACAGTAGATATTGAAGAAGCTGACCCGCCACAGCTGGGTGACTTTACTAGAGACTGGGTAGAATACAACTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGACTGGCGGAAGCAGTGTaGGCTGGCCATCAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVSYGKEERNCRIRLAEAV*AGHQGC Trigger: GCAGCCCTGATGGCCAGCCAACACTGCTTCCGCCAG...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS TCA 90 bp | TTTCCCATCTTACATAAAGGCCTAAACATATGGCCACAAGTAAGTTaGTCCTGGCTAGATAGCCGAGGTACCGCACGGAGGAATGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: FPILHKGLNIWPQVS*SWLDSRGTARRNAC Trigger: ACATGCATTCCTCCGTGCGGTACCTCGGCTATCTAGCCAGGATCAACTTACTTGTGGCCATATGTTTAGGCCTTTATGTAAGATGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTAATCTTTGGATGGCATaGAGCATGCCAGTAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSNLWMA*SMPVDL Trigger: GAGGTCTACTGGCATGCTCAATGCCATCCAAAGATT...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS TCA 90 bp | GGGTCAGCTTCTTCAATATCTACTGTCTTCGCCAGCTCAGCTCCCTaGACTGCAACATACTGGTCATTAATCTTTCTCACTTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSASSISTVFASSAP*TATYWSLIFLTSFT Trigger: GGTGAAAGAAGTGAGAAAGATTAATGACCAGTATGTTGCAGTTCAGGGAGCTGAGCTGGCGAAGACAGTAGATATTGAAGAAGCTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS CCA 90 bp | CCAACAAGTTCCAGAAACTCCACTGTGGTTAGTAAAGTAGGCCGATaGCGGACATATCCAGAAATTCTCTCCACCAAAGCACACAATATC | + |
|
Preference number: 5 (lower is better) Translates to: PTSSRNSTVVSKVGR*RTYPEILSTKAHNI Trigger: GATATTGTGTGCTTTGGTGGAGAGAATTTCTGGATATGTCCGCCATCGGCCTACTTTACTAACCACAGTGGAGTTTCTGGAACTTGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTGTTCCCCCTAAGCAGTaGCCAAGTTCATGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IMSRSLPAPSIYTSANSPVPPKQ*PSSWKS Trigger: GCTCTTCCATGAACTTGGCAACTGCTTAGGGGGAAC...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTTCAGGGCTGCAGAAGTaGGTAGGGATCACAATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCSGLQK*VGITIA Trigger: CGCTATTGTGATCCCTACCAACTTCTGCAGCCCTGA...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTTCAGGGCTGCAGAAGTaGGTAGGGATCACAATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IMSRSLPAPSIYTSANSPSGLQK*VGITIA Trigger: CGCTATTGTGATCCCTACCAACTTCTGCAGCCCTGA...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTTGTAACATCCAGTGCTaGGCCACATCGCTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCCNIQC*ATSLPV Trigger: GACAGGAAGCGATGTGGCCAAGCACTGGATGTTACA...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS GCA 90 bp | AGCTTCTTCAATATCTACTGTCTTCGCCAGCTCAGCTCCCTGAACTaGAACATACTGGTCATTAATCTTTCTCACTTCTTTCACCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SFFNIYCLRQLSSLN*NILVINLSHFFHPW Trigger: CCATGGGTGAAAGAAGTGAGAAAGATTAATGACCAGTATGTTGCAGTTCAGGGAGCTGAGCTGGCGAAGACAGTAGATATTGAAGAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS CCA 90 bp | GAAGGCCAAGCAGAAATCCAAACCAGAGATTGGAGAGACTTAAACTaGCTGCTTCCATTGAAAAGTAATAGTAGAGTATGCTGGCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: EGQAEIQTRDWRDLN*LLPLKSNSRVCWRS Trigger: GGATCGCCAGCATACTCTACTATTACTTTTCAATGGAAGCAGCCAGTTTAAGTCTCTCCAATCTCTGGTTTGGATTTCTGCTTGGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTTTATCTGCCCTGTGGTaGATATACACTTTATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSLSALW*IYTLWQ Trigger: CTGCCATAAAGTGTATATCAACCACAGGGCAGATAA...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTAATCTTTGGATGGCATaGAGCATGCCAGTAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCNLWMA*SMPVDL Trigger: GAGGTCTACTGGCATGCTCAATGCCATCCAAAGATT...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTCTTTCACCCATGGGGTaGAATTCTCGCTGTCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IMSRSLPAPSIYTSANSPLSPMG*NSRCLR Trigger: TCTTAGACAGCGAGAATTCAACCCCATGGGTGAAAG...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGGTGTGGTGGTAAAAGGGCATTTTGCAGTCATTATGAGCAGGTCTCTTCCAGCAGATGTTGTTaGTGGAGTTACAGTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TSGCGGKRAFCSHYEQVSSSRCC*WSYSCI Trigger: AATACAACTGTAACTCCACAAACAACATCTGCTGGA...AGAGACCTGCTCATAATGACTGCAAAATGCCCTTTTACCACCACACCCAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | ATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTCCTGACAAGTTTAAAGCCTaGTCCTGTGTCCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IMSRSLPAPSIYTSANSPDKFKA*SCVQHC Trigger: ACAGTGCTGGACACAGGACAAGGCTTTAAACTTGTC...AGGACTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS GCA 90 bp | ACGCATCCCTTTGGATGCCATGATTCTGTCAAGGCTATTGTTATCTaGCCTGTGGTTGATATACACTTTATGGCAGTCATTCAACTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: THPFGCHDSVKAIVI*PVVDIHFMAVIQLS Trigger: ACTAAGTTGAATGACTGCCATAAAGTGTATATCAACCACAGGGCAGATAACAATAGCCTTGACAGAATCATGGCATCCAAAGGGATGCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGAAATCCAAACCAGAGATaGGAGAGACTTAAACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLVWSTFSNGCLENKALGNPNQR*ERLKLA Trigger: AGCCAGTTTAAGTCTCTCCAATCTCTGGTTTGGATT...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTATTCTGTCAAGGCTATaGTTATCTGCCCTGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCILSRL*LSALWL Trigger: CAACCACAGGGCAGATAACAATAGCCTTGACAGAAT...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGTTCCCCCTAAGCAGTaGCCAAGTTCATGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVSYGKEERNCRIRVPPKQ*PSSWKS Trigger: GCTCTTCCATGAACTTGGCAACTGCTTAGGGGGAAC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTTCAGTCCAGCAGATGTaGTTTGTGGAGTTACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCSVQQM*FVELQL Trigger: CAACTGTAACTCCACAAACAACATCTGCTGGACTGA...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGATGTAACATCCAGTGCTaGGCCACATCGCTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVSYGKEERNCRIRCNIQC*ATSLPV Trigger: GACAGGAAGCGATGTGGCCAAGCACTGGATGTTACA...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | TACATTAACAATGCTTTCATCTCAAAGGCAGTTGGGGCTTTTCTGCTGTACTGTCACCTAAAACAAGCTTaGCAGACCCAAAAGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YINNAFISKAVGAFLLYCHLKQA*QTQKRF Trigger: GAACCTCTTTTGGGTCTGCAAAGCTTGTTTTAGGTG...ACAGTACAGCAGAAAAGCCCCAACTGCCTTTGAGATGAAAGCATTGTTAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGCACCTAAAACAAGCTTaGCAGACCCAAAAGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQHLKQA*QTQKRF Trigger: GAACCTCTTTTGGGTCTGCAAAGCTTGTTTTAGGTG...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
||
| CDS-3UTR CAA 90 bp | ACACTTGTCTGGTCTACATTCTCTAACGGGTGCCTAGAAAATAAGGCATTAGGATCCAGCAGATGTTGTTaGTGGAGTTACAGTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TLVWSTFSNGCLENKALGSSRCC*WSYSCI Trigger: AATACAACTGTAACTCCACAAACAACATCTGCTGGA...TCCTAATGCCTTATTTTCTAGGCACCCGTTAGAGAATGTAGACCAGACAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CAA 90 bp | AGTCATTATGAGCAGGTCTCTTCCTGCTCCAAGTATTTATACTTCTGCAAACAGTTTGTGGAGTTACAGTaGTATTCTACCCAGTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: SHYEQVSSCSKYLYFCKQFVELQ*YSTQSL Trigger: TAGAGACTGGGTAGAATACAACTGTAACTCCACAAA...CTGTTTGCAGAAGTATAAATACTTGGAGCAGGAAGAGACCTGCTCATAATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS-3UTR CAA 90 bp | GCTGTGTATAGAGTTGTTTCATATGGAAAGGAAGAAAGGAATTGTAGGATTAGAGACAAGTTTAAAGCCTaGTCCTGTGTCCAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: AVYRVVSYGKEERNCRIRDKFKA*SCVQHC Trigger: ACAGTGCTGGACACAGGACAAGGCTTTAAACTTGTC...TCTAATCCTACAATTCCTTTCTTCCTTTCCATATGAAACAACTCTATACACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CCA 90 bp | AAGCTTTCAGTTTGGAATGCAGAGTATCAAAAGACAGCCCACTTGTaGAATAGTCACATCCATAGGTCTCAATCATATGATATGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: KLSVWNAEYQKTAHL*NSHIHRSQSYDMQK Trigger: TTTTTGCATATCATATGATTGAGACCTATGGATGTGACTATTCCACAAGTGGGCTGTCTTTTGATACTCTGCATTCCAAACTGAAAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS TCA 90 bp | TGGTATCACAAAATACCAGAGATGAGTGTCTCTAAGTTTAAATGCTaGAAGGATGAAGAATGTAAGCTCAATCATTGCAGTGAAAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: WYHKIPEMSVSKFKC*KDEECKLNHCSEKH Trigger: GTGCTTTTCACTGCAATGATTGAGCTTACATTCTTCATCCTTTCAGCATTTAAACTTAGAGACACTCATCTCTGGTATTTTGTGATACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS GCA 72 bp | TCCAGCGCTTTGACACGCCATACACGGCCCTCACTGTaGGCCCCTTCTCAGTCCAGCAGATGTTGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSALTRHTRPSL*APSQSSRCCLW Trigger: CCACAAACAACATCTGCTGGACTGAGAAGGGGCGCACAGTGAGGGCCGTGTATGGCGTGTCAAAGCGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CAA 72 bp | GGATACGTAACCCGAGGGAAGTGTAACATCCAGTGCTaGGCCACATCGCTTCCTGTCGGCAGGTGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GYVTRGKCNIQC*ATSLPVGRCSV Trigger: CACGCTGCACCTGCCGACAGGAAGCGATGTGGCCAAGCACTGGATGTTACACTTCCCTCGGGTTACGTATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS GCA 72 bp | AACGGATACGTAACCCGAGGGAAGTGTAACATCCAGTaGTTGGCCACATCGCTTCCTGTCGGCAGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NGYVTRGKCNIQ*LATSLPVGRCS Trigger: GCTGCACCTGCCGACAGGAAGCGATGTGGCCAAGCACTGGATGTTACACTTCCCTCGGGTTACGTATCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CCA 72 bp | AACTCCTGTACATGTTCTGGCGGAAGCAGTGTTGGCTaGCCATCAGGGCTGCAGAAGTTGGTAGGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: NSCTCSGGSSVG*PSGLQKLVGIT Trigger: TGTGATCCCTACCAACTTCTGCAGCCCTGATGGCCAGCCAACACTGCTTCCGCCAGAACATGTACAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CCA 72 bp | GTATTCTACCCAGTCTCTAGTAAAGTCACCCAGCTGTaGCGGGTCAGCTTCTTCAATATCTACTGTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: VFYPVSSKVTQL*RVSFFNIYCLR Trigger: GCGAAGACAGTAGATATTGAAGAAGCTGACCCGCCACAGCTGGGTGACTTTACTAGAGACTGGGTAGAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CCA 72 bp | TCCAGAAACTCCACTGTGGTTAGTAAAGTAGGCCGATaGCGGACATATCCAGAAATTCTCTCCACCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRNSTVVSKVGR*RTYPEILSTKA Trigger: TGCTTTGGTGGAGAGAATTTCTGGATATGTCCGCCATCGGCCTACTTTACTAACCACAGTGGAGTTTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS CCA 72 bp | CATCCACTGTCCGAAGTTCAAGGAAAGCTTTCAGTTTaGAATGCAGAGTATCAAAAGACAGCCCACTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: HPLSEVQGKLSV*NAEYQKTAHLW Trigger: CCACAAGTGGGCTGTCTTTTGATACTCTGCATTCCAAACTGAAAGCTTTCCTTGAACTTCGGACAGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS CAA 72 bp | CGCATCCCTTTGGATGCCATGATTCTGTCAAGGCTATaGTTATCTGCCCTGTGGTTGATATACACTTTATGG | + |
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Preference number: 6 (lower is better) Translates to: RIPLDAMILSRL*LSALWLIYTLW Trigger: CCATAAAGTGTATATCAACCACAGGGCAGATAACAATAGCCTTGACAGAATCATGGCATCCAAAGGGATGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS TCA 72 bp | TCTTCAATATCTACTGTCTTCGCCAGCTCAGCTCCCTaGACTGCAACATACTGGTCATTAATCTTTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: SSISTVFASSAP*TATYWSLIFLT Trigger: AGTGAGAAAGATTAATGACCAGTATGTTGCAGTTCAGGGAGCTGAGCTGGCGAAGACAGTAGATATTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS GCA 72 bp | AAAAGCACAGAAAGTCTCCTGCAAATTCTCCCACGATaGAGAAAAGGTTTCCACCTCTCAGTTACTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KSTESLLQILPR*RKGFHLSVTES Trigger: ACTTTCAGTAACTGAGAGGTGGAAACCTTTTCTGCATCGTGGGAGAATTTGCAGGAGACTTTCTGTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS TCA 72 bp | AAATTAAGCAAAAATGACGCATCCCTTTGGATGCCATaGTTCTGTCAAGGCTATTGTTATCTGCCCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: KLSKNDASLWMP*FCQGYCYLPCG Trigger: ACCACAGGGCAGATAACAATAGCCTTGACAGAATCATGGCATCCAAAGGGATGCGTCATTTTTGCTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS CAA 90 bp | GAAATCCAAACCAGAGATTGGAGAGACTTAAACTGGCTGCTTCCATaGAAAAGTAATAGTAGAGTATGCTGGCGATCCCAAGAACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: EIQTRDWRDLNWLLP*KSNSRVCWRSQEQR Trigger: TCTTTGTTCTTGGGATCGCCAGCATACTCTACTATTACTTTTCAATGGAAGCAGCCAGTTTAAGTCTCTCCAATCTCTGGTTTGGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS CAA 90 bp | GGAAAGCTTTCAGTTTGGAATGCAGAGTATCAAAAGACAGCCCACTaGTGGAATAGTCACATCCATAGGTCTCAATCATATGATATGCAA | + |
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Preference number: 6 (lower is better) Translates to: GKLSVWNAEYQKTAH*WNSHIHRSQSYDMQ Trigger: TTGCATATCATATGATTGAGACCTATGGATGTGACTATTCCACAAGTGGGCTGTCTTTTGATACTCTGCATTCCAAACTGAAAGCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031554.9 ENSMUST00000149123.3 |
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| CDS GCA 72 bp | TTTGGATGCCATGATTCTGTCAAGGCTATTGTTATCTaGCCTGTGGTTGATATACACTTTATGGCAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: FGCHDSVKAIVI*PVVDIHFMAVI Trigger: AATGACTGCCATAAAGTGTATATCAACCACAGGGCAGATAACAATAGCCTTGACAGAATCATGGCATCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS CCA 72 bp | GCAGAAATCCAAACCAGAGATTGGAGAGACTTAAACTaGCTGCTTCCATTGAAAAGTAATAGTAGAGTATGC | + |
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Preference number: 6 (lower is better) Translates to: AEIQTRDWRDLN*LLPLKSNSRVC Trigger: GCATACTCTACTATTACTTTTCAATGGAAGCAGCCAGTTTAAGTCTCTCCAATCTCTGGTTTGGATTTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS CCA 72 bp | GCCATGATTCTGTCAAGGCTATTGTTATCTGCCCTGTaGTTGATATACACTTTATGGCAGTCATTCAACTTA | + |
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Preference number: 6 (lower is better) Translates to: AMILSRLLLSAL*LIYTLWQSFNL Trigger: TAAGTTGAATGACTGCCATAAAGTGTATATCAACCACAGGGCAGATAACAATAGCCTTGACAGAATCATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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| CDS TCA 72 bp | AAAATACCAGAGATGAGTGTCTCTAAGTTTAAATGCTaGAAGGATGAAGAATGTAAGCTCAATCATTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: KIPEMSVSKFKC*KDEECKLNHCS Trigger: ACTGCAATGATTGAGCTTACATTCTTCATCCTTTCAGCATTTAAACTTAGAGACACTCATCTCTGGTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031554.9 |
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