Pregenerated sensors for TMEM167 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012422Ensembl transcript IDs: ENSMUST00000012566.9, ENSMUST00000161457.8, ENSMUST00000161568.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAGAGCACCCGTTGGGTGGAGAAGCCTCTGGAGACTGTGGGACTaGCCACCCAGTTCAGGCCCAGGTAGCCAGGAACTGGGGCTGACC | + |
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Preference number: 1 (lower is better) Translates to: ARAPVGWRSLWRLWD*PPSSGPGSQELGLT Trigger: GGTCAGCCCCAGTTCCTGGCTACCTGGGCCTGAACTGGGTGGGCAGTCCCACAGTCTCCAGAGGCTTCTCCACCCAACGGGTGCTCTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR GCA 90 bp | CCTCGCCCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTaGCCGAAGTGCTTTACTGCTCCTCCACACCCCACTCACAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PRPLSFVFTVCVDAS*PKCFTAPPHPTHKD Trigger: GTCTTTGTGAGTGGGGTGTGGAGGAGCAGTAAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGGGCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | GAGGAATGGGTGACACATGACCCAGGTAACAGATTCTGCAGCTGCTaGTGGCACATGCCAGCACCAGGATCTTCCAGTGACCACTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: EEWVTHDPGNRFCSC*WHMPAPGSSSDHLV Trigger: GACTAAGTGGTCACTGGAAGATCCTGGTGCTGGCATGTGCCATCAGCAGCTGCAGAATCTGTTACCTGGGTCATGTGTCACCCATTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CCA 90 bp | CAATCTTTCCCTATCAGTGCGGGCCTGCAGATCAGTTTCAATGTTTaGATAGAACACAGAAATGTTCCTACAGTGCCAGCCTTCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: QSFPISAGLQISFNV*IEHRNVPTVPAFPN Trigger: GTTGGGGAAGGCTGGCACTGTAGGAACATTTCTGTGTTCTATCCAAACATTGAAACTGATCTGCAGGCCCGCACTGATAGGGAAAGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | AGTGTTTCAGAAGAACACTGTGAAAGAAAGTTACTGAGGAATGGGTaGCACATGACCCAGGTAACAGATTCTGCAGCTGCTGATGGCACA | + |
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Preference number: 1 (lower is better) Translates to: SVSEEHCERKLLRNG*HMTQVTDSAAADGT Trigger: TGTGCCATCAGCAGCTGCAGAATCTGTTACCTGGGTCATGTGTCACCCATTCCTCAGTAACTTTCTTTCACAGTGTTCTTCTGAAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR GCA 90 bp | TCTGTTATAATTAAGCCTTCACATTGTTCCAAGGTCCCAGAAGCCTaGAAGCTTGAAGAGCTTGAAATCCCGCAGGACTGCAGAAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SVIIKPSHCSKVPEA*KLEELEIPQDCRKE Trigger: TTCCTTTCTGCAGTCCTGCGGGATTTCAAGCTCTTCAAGCTTGCAGGCTTCTGGGACCTTGGAACAATGTGAAGGCTTAATTATAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | CACCCCAGTGTACGGCTTGAAATCACTGGATTCTATTATATGGCTTaGAATGAGCTTCACACACGTCCTTTTGACCATTGCAGTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: HPSVRLEITGFYYMA*NELHTRPFDHCSDP Trigger: AGGATCACTGCAATGGTCAAAAGGACGTGTGTGAAGCTCATTTCAAGCCATATAATAGAATCCAGTGATTTCAAGCCGTACACTGGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR TCA 90 bp | AATAGGCCAGTCGCTAGAAGGTACCATTCTGTGAAGACATTATTTTaGAGCCCTAGTCAAAGGAGCCTTGGAATTTGCCACTGGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: NRPVARRYHSVKTLF*SPSQRSLGICHWVS Trigger: AGAAACCCAGTGGCAAATTCCAAGGCTCCTTTGACTAGGGCTTCAAAATAATGTCTTCACAGAATGGTACCTTCTAGCGACTGGCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | TTAGTGATGATGAACAGATGGCCACCCAGAAATCAAAGTGATAGGTaGCTACTTACTGTGCACAAATATGGTGACGAGGGAGTCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: LVMMNRWPPRNQSDR*LLTVHKYGDEGVLL Trigger: AAGTAGGACTCCCTCGTCACCATATTTGTGCACAGTAAGTAGTCACCTATCACTTTGATTTCTGGGTGGCCATCTGTTCATCATCACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CCA 90 bp | ATGATGTACTGTATTCATGTGAGTGATCATGCCACAGTGCACATGTaGAGGTTAGAGGACAACTTCAGAGTGGGTTCTTTCTTTCTGACT | + |
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Preference number: 1 (lower is better) Translates to: MMYCIHVSDHATVHM*RLEDNFRVGSFFLT Trigger: AGTCAGAAAGAAAGAACCCACTCTGAAGTTGTCCTCTAACCTCCACATGTGCACTGTGGCATGATCACTCACATGAATACAGTACATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
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| 3UTR CCA 90 bp | TACCATGTGCAACATGACTCAACCTCATCATCTATAATAATTTTCTaGAGTGAAGCAGGCATACAGAACCCTCTCTCAAACACCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: YHVQHDSTSSSIIIF*SEAGIQNPLSNTSS Trigger: AGAACTGGTGTTTGAGAGAGGGTTCTGTATGCCTGCTTCACTCCAGAAAATTATTATAGATGATGAGGTTGAGTCATGTTGCACATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR TCA 90 bp | ATTCTGTTATCCTACTCTCCTTATACTCTGAATGTAAAGCCTAGCTaGAGCCAAAATCACGCTTCTCACTGCTTAGGTGAGACATCTATT | + |
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Preference number: 1 (lower is better) Translates to: ILLSYSPYTLNVKPS*SQNHASHCLGETSI Trigger: AATAGATGTCTCACCTAAGCAGTGAGAAGCGTGATTTTGGCTTCAGCTAGGCTTTACATTCAGAGTATAAGGAGAGTAGGATAACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR GCA 90 bp | ATATTCAAGACCATTTATCACTCTGTTAGACTTTTTCATAGCCCCTaGTTCCTGGCTGGGTTATTTATGCAACATTTCTCCTCATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: IFKTIYHSVRLFHSP*FLAGLFMQHFSSWE Trigger: TTCCCATGAGGAGAAATGTTGCATAAATAACCCAGCCAGGAAGCAGGGGCTATGAAAAAGTCTAACAGAGTGATAAATGGTCTTGAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | CAGGAGGTCTTAGCCTATCCATTAAATTCTTCGACTAGACTTCTGTaGATACCCCATGTAAATTCATTCAGGTTCTCTTTGGTCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: QEVLAYPLNSSTRLL*IPHVNSFRFSLVFI Trigger: AATGAAGACCAAAGAGAACCTGAATGAATTTACATGGGGTATTCACAGAAGTCTAGTCGAAGAATTTAATGGATAGGCTAAGACCTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR TCA 90 bp | GGACGACTACCTCTTTTAAACAGGAATTCTTTCTACAAAAGGTACTaGAATGGCCTGTCAGATTATTTAGGAATTAGTTCAGGGCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: GRLPLLNRNSFYKRY*NGLSDYLGISSGQS Trigger: ACTTTGCCCTGAACTAATTCCTAAATAATCTGACAGGCCATTTCAGTACCTTTTGTAGAAAGAATTCCTGTTTAAAAGAGGTAGTCGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CCA 90 bp | GTGTTCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTaGCATATCTGTTGTATGCAAGTTATCAAATGTAGTTTACCAATG | + |
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Preference number: 1 (lower is better) Translates to: VFVLFYIDYFDLSGA*HICCMQVIKCSLPM Trigger: CATTGGTAAACTACATTTGATAACTTGCATACAACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGAACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGCTTCAGACCCATCGGGTGCCCGGGACAAGCTTCATGGGAAGTTTCTCAGCCTCTGGAGACTGTaGGACTGCCCACCCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: DCASDPSGARDKLHGKFLSLWRL*DCPPSS Trigger: TGAACTGGGTGGGCAGTCCCACAGTCTCCAGAGGCT...GAGAAACTTCCCATGAAGCTTGTCCCGGGCACCCGATGGGTCTGAAGCACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACCTTTCAGGGTTTTCCCTCCAATGCAGAGTCCCTGGGGTCAATGACTGTGTTCAGACCCATCGGGTaGCCGGGACAAGCTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: VTFQGFPSNAESLGSMTVFRPIG*PGQASW Trigger: CCATGAAGCTTGTCCCGGGCACCCGATGGGTCTGAA...CACAGTCATTGACCCCAGGGACTCTGCATTGGAGGGAAAACCCTGAAAGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR-3UTR CCA 90 bp | GTGACCTTTCAGGGTTTTCCCTCCAATGCAGAGTCCCTGGGGTCAATGACTGTGAGAGCACCCGTTGGGTaGAGAAGCCTCTGGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: VTFQGFPSNAESLGSMTVRAPVG*RSLWRL Trigger: CAGTCTCCAGAGGCTTCTCCACCCAACGGGTGCTCT...CACAGTCATTGACCCCAGGGACTCTGCATTGGAGGGAAAACCCTGAAAGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR CAA 90 bp | GAAGATTCTAGGGCCAACAAGGCAGCCAGGGAGAACATGTGGACATaGTCAGACCTGAGTCTTAGTGCTCCTCGCCCGCTAAGCTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: EDSRANKAARENMWT*SDLSLSAPRPLSFV Trigger: CACAAAGCTTAGCGGGCGAGGAGCACTAAGACTCAGGTCTGACAATGTCCACATGTTCTCCCTGGCTGCCTTGTTGGCCCTAGAATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAGTGAAGCAGGCATACAGAACCCTCTCTCAAACACCAGTTCTCAAGAGCAGTCCCTGGGGTCAATaGCTGTGCTTCAGACCCATC | + |
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Preference number: 2 (lower is better) Translates to: SGVKQAYRTLSQTPVLKSSPWGQ*LCFRPI Trigger: GATGGGTCTGAAGCACAGTCATTGACCCCAGGGACT...GCTCTTGAGAACTGGTGTTTGAGAGAGGGTTCTGTATGCCTGCTTCACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR CAA 90 bp | TACAGAGAACGAAGACTGCACGGTGCTTACTTGCTCACCGCTCACTaGCTGCTTTTCTTTCTAAGGTGCTCTTCGTCACAGTGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YRERRLHGAYLLTAH*LLFFLRCSSSQCGS Trigger: GCTGCCACACTGTGACGAAGAGCACCTTAGAAAGAAAAGCAGCAAGTGAGCGGTGAGCAAGTAAGCACCGTGCAGTCTTCGTTCTCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGAGATTCTGCAGCTGCTaGTGGCACATGCCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQRFCSC*WHMPAP Trigger: TGGTGCTGGCATGTGCCATCAGCAGCTGCAGAATCT...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCACCTAGAGACCCATTCCATGCAGACAAAAGGGCCCAGAGGGTCTGCGAACATAAAACAAATGTaGGGACATGGACTGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: HLHLETHSMQTKGPRGSANIKQM*GHGLKI Trigger: AATCTTCAGTCCATGTCCCCACATTTGTTTTATGTT...CGCAGACCCTCTGGGCCCTTTTGTCTGCATGGAATGGGTCTCTAGGTGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCACCTAGAGACCCATTCCATGCAGACAAAAGGGCCCAGAGGGTCTGCGCTCATCTATTTTCAATaGTCACATGCCATACCAATT | + |
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Preference number: 2 (lower is better) Translates to: HLHLETHSMQTKGPRGSALIYFQ*SHAIPI Trigger: AATTGGTATGGCATGTGACCATTGAAAATAGATGAG...CGCAGACCCTCTGGGCCCTTTTGTCTGCATGGAATGGGTCTCTAGGTGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CAA 90 bp | CCAATCTTTCCCTATCAGTGCGGGCCTGCAGATCAGTTTCAATGTTaGGATAGAACACAGAAATGTTCCTACAGTGCCAGCCTTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PIFPYQCGPADQFQC*DRTQKCSYSASLPQ Trigger: TTGGGGAAGGCTGGCACTGTAGGAACATTTCTGTGTTCTATCCAAACATTGAAACTGATCTGCAGGCCCGCACTGATAGGGAAAGATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CAA 90 bp | ACTCTCAGGACCCTGTCAACTTGGTTACGAAGTATGTTTGTACAATaGCCTTCCTTCTACAGCCCTGGCAAGCATGGACCACAGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: TLRTLSTWLRSMFVQ*PSFYSPGKHGPQQN Trigger: ATTCTGCTGTGGTCCATGCTTGCCAGGGCTGTAGAAGGAAGGCAATTGTACAAACATACTTCGTAACCAAGTTGACAGGGTCCTGAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAGCTCAAATGGCAGCTGCTCTGTATTGTAATTTAAACGTCTCATTCCATTGGAGACTGTGGGACTaGCCACCCAGTTCAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SRAQMAAALYCNLNVSFHWRLWD*PPSSGP Trigger: TGGGCCTGAACTGGGTGGGCAGTCCCACAGTCTCCA...ATGGAATGAGACGTTTAAATTACAATACAGAGCAGCTGCCATTTGAGCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR-3UTR GCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGAGGAGCCTTGGAATTTaGCACTGGGTTTCTACTTCG | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQRSLGI*HWVSTS Trigger: CGAAGTAGAAACCCAGTGGCAAATTCCAAGGCTCCT...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CAA 90 bp | AAGCACGATGTCAAAGCTGATGGTCTAGCTAGCTCTGGTGGCCATTaGGGCTACACAGTGAAGACTGCAAGTTCAGGGCTTTGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KHDVKADGLASSGGH*GYTVKTASSGLCFY Trigger: ATAAAAACAAAGCCCTGAACTTGCAGTCTTCACTGTGTAGCCCAAATGGCCACCAGAGCTAGCTAGACCATCAGCTTTGACATCGTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CAA 90 bp | CTTCACATTGTTCCAAGGTCCCAGAAGCCTGCAAGCTTGAAGAGCTaGAAATCCCGCAGGACTGCAGAAAGGAAGTTACCTATTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LHIVPRSQKPASLKS*KSRRTAERKLPIQL Trigger: TAACTGAATAGGTAACTTCCTTTCTGCAGTCCTGCGGGATTTCAAGCTCTTCAAGCTTGCAGGCTTCTGGGACCTTGGAACAATGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTGCCCGAAGTGCTTTCTACACAGTGAAGACTaGAAGTTCAGGGCTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PLSFVFTVCVDASCPKCFLHSED*KFRALF Trigger: AAACAAAGCCCTGAACTTGCAGTCTTCACTGTGTAG...AAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGCTATCAGTGCGGGCCTaGAGATCAGTTTCAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQLSVRA*RSVSMF Trigger: AAACATTGAAACTGATCTGCAGGCCCGCACTGATAG...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGAGGCAAGTCCTTGTTTACAGTCTGATAGCAAGCACATGCTGGTAGTTCTTGGAATTTGCCACTaGGTTTCTACTTCGTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: FLEASPCLQSDSKHMLVVLGICH*VSTSCP Trigger: CGGGCACGAAGTAGAAACCCAGTGGCAAATTCCAAG...AACTACCAGCATGTGCTTGCTATCAGACTGTAAACAAGGACTTGCCTCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTGCCCGAAGTGCTTTGTGATGATGAACAGATaGCCACCCAGAAATCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PLSFVFTVCVDASCPKCFVMMNR*PPRNQS Trigger: ACTTTGATTTCTGGGTGGCCATCTGTTCATCATCAC...AAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGCTCAAATGGCAGCTGCTCTGTATTGTAATTTAAACGTCTCATTCCATGTTTGTGGGGGTGGCTaGACTTGTGACCTTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRAQMAAALYCNLNVSFHVCGGG*TCDLSG Trigger: CCCTGAAAGGTCACAAGTTCAGCCACCCCCACAAAC...ATGGAATGAGACGTTTAAATTACAATACAGAGCAGCTGCCATTTGAGCTCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGCCTCCAAATTTATCTTaGCAAGTCACAGATGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQPPNLS*QVTDGD Trigger: ATCTCCATCTGTGACTTGTCAAGATAAATTTGGAGG...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTGCCCGAAGTGCTTTCCAGTTTTAACTAGCTaGAGACATCCCAAAAATCTT | + |
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Preference number: 2 (lower is better) Translates to: PLSFVFTVCVDASCPKCFPVLTS*RHPKNL Trigger: AAGATTTTTGGGATGTCTGCAGCTAGTTAAAACTGG...AAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | TACTCTAGTCATAATGGCCACCCTCTAAGCTCCATGTACTGCTCTCTTTCAATGAGGAAATGTAAACTGTaGACTTTTGGGATGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: YSSHNGHPLSSMYCSLSMRKCKL*TFGMGA Trigger: GGCACCCATCCCAAAAGTGCACAGTTTACATTTCCT...CATTGAAAGAGAGCAGTACATGGAGCTTAGAGGGTGGCCATTATGACTAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCTACTGGTGGGGAAGAGATTTTAAAGGTGGGACCTTCTCAGAAGTAGGTCAAACCTCCCCTCTTTaGTACTGTCTTGTATCATGG | + |
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Preference number: 2 (lower is better) Translates to: ISYWWGRDFKGGTFSEVGQTSPL*YCLVSW Trigger: CCATGATACAAGACAGTAGCAAAGAGGGGAGGTTTG...ACCTACTTCTGAGAAGGTCCCACCTTTAAAATCTCTTCCCCACCAGTAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGTCCTTTTTAGTTCCCTaGTCCATCATGACTTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQSFLVP*SIMTLS Trigger: ACTCAAAGTCATGATGGACCAGGGAACTAAAAAGGA...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR CAA 90 bp | AGGGCAGAATGTTCATTTCTTCGTTCTGGAGTTCCAGAAGGCGGCTaGTATTACAATAGATATGAATTCAGCATGGAGGGCTGTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: RAECSFLRSGVPEGG*YYNRYEFSMEGCLT Trigger: AGTTAGACAGCCCTCCATGCTGAATTCATATCTATTGTAATACAAGCCGCCTTCTGGAACTCCAGAACGAAGAAATGAACATTCTGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGCTTATTTCCTACTGGTaGGGAAGAGATTTTAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQLISYW*GRDFKG Trigger: ACCTTTAAAATCTCTTCCCCACCAGTAGGAAATAAG...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAATCTGGATGGAGCAGAAAAGGTCCCCATGGGATAGATGGAGTGTTTCAGACAGTAGGTCAGAGCTaGTCTACAAAATATTTACCA | + |
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Preference number: 2 (lower is better) Translates to: DKSGWSRKGPHGIDGVFQTVGQS*STKYLP Trigger: TGGTAAATATTTTGTAGACCAGCTCTGACCTACTGT...CTGAAACACTCCATCTATCCCATGGGGACCTTTTCTGCTCCATCCAGATTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTACTGGTGGGGAAGAGATTTTAAAGGTGGGACCTTCTCAGAAGTAGGTTTAACTCATGATCTCTaGGAAGTTCTACCCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: ISYWWGRDFKGGTFSEVGLTHDL*EVLPSM Trigger: CATTGAGGGTAGAACTTCTCAGAGATCATGAGTTAA...ACCTACTTCTGAGAAGGTCCCACCTTTAAAATCTCTTCCCCACCAGTAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
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| 3UTR-3UTR GCA 90 bp | TACTCTAGTCATAATGGCCACCCTCTAAGCTCCATGTACTGCTCTCTTTCAATGTTCCTTAGTCAACTTTaGTCACTCATAAACCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YSSHNGHPLSSMYCSLSMFLSQL*SLINQG Trigger: CCCTTGGTTTATGAGTGAGCAAAGTTGACTAAGGAA...CATTGAAAGAGAGCAGTACATGGAGCTTAGAGGGTGGCCATTATGACTAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCCTACTGGTGGGGAAGAGATTTTAAAGGTGGGACCTTCTCAGAAGTAGGTCAGCAGGAAACACCTTaGATTGAAACATATATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ISYWWGRDFKGGTFSEVGQQETP*IETYMV Trigger: TACCATATATGTTTCAATTCAAGGTGTTTCCTGCTG...ACCTACTTCTGAGAAGGTCCCACCTTTAAAATCTCTTCCCCACCAGTAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTGGCATATCTGTTAAGCAAGACATATCCTaGCCTGTCAATGGCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SFYSTLTILTLVVPGISVKQDIS*PVNGPD Trigger: ATCTGGGCCATTGACAGGGCAGGATATGTCTTGCTT...AACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTCTAGTCATAATGGCCACCCTCTAAGCTCCATGTACTGCTCTCTTTCAATGATGTTCAGAGACAAATaGCTTAACCATTCTTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YSSHNGHPLSSMYCSLSMMFRDK*LNHSSH Trigger: ATGGGAAGAATGGTTAAGCCATTTGTCTCTGAACAT...CATTGAAAGAGAGCAGTACATGGAGCTTAGAGGGTGGCCATTATGACTAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTGGCATATCTGTTAAACACAGCCTTGACTaGCCAGTTGCCTCTACAATG | + |
|
Preference number: 2 (lower is better) Translates to: SFYSTLTILTLVVPGISVKHSLD*PVASTM Trigger: CATTGTAGAGGCAACTGGCCAGTCAAGGCTGTGTTT...AACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 90 bp | GCAGTAAACGCTCAATCTCTACACATTTGCTTCAGGCCACTTTCCTaGTCAAATAAAACTGTAACAGTAGTATCTGGCTATTATCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AVNAQSLHICFRPLS*SNKTVTVVSGYYPV Trigger: GACAGGATAATAGCCAGATACTACTGTTACAGTTTTATTTGACAAGGAAAGTGGCCTGAAGCAAATGTGTAGAGATTGAGCGTTTACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTTATGATGTACTGTATTCATGTGAGTGATCATGCCACAGTGCACATGTGGGAAAGCATTCCTATGTaGAATCAAGCTAAACAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ILMMYCIHVSDHATVHMWESIPM*NQAKQP Trigger: TGGCTGTTTAGCTTGATTTCACATAGGAATGCTTTC...CCACATGTGCACTGTGGCATGATCACTCACATGAATACAGTACATCATAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGGACTCTTGCGTTCCCCTGTTGAAGAAAAGAAGACATTCCTCTTGGTTGAACCTCTACTTTGTAGTTTaGAAGTGTGTACTATGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: KDSCVPLLKKRRHSSWLNLYFVV*KCVLCR Trigger: TCTACATAGTACACACTTGCAAACTACAAAGTAGAG...GTTCAACCAAGAGGAATGTCTTCTTTTCTTCAACAGGGGAACGCAAGAGTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTTATGATGTACTGTATTCATGTGAGTGATCATGCCACAGTGCACATGTGGCCTGCTGAACTTTGCTaGCACATCATGAGATATTAT | + |
|
Preference number: 2 (lower is better) Translates to: ILMMYCIHVSDHATVHMWPAELC*HIMRYY Trigger: ATAATATCTCATGATGTGGCAGCAAAGTTCAGCAGG...CCACATGTGCACTGTGGCATGATCACTCACATGAATACAGTACATCATAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGAGCTCAAATGGCAGCTGCTCTGTATTGTAATTTAAACGTCTCATTCCATCGTCCTTTTGACCATTaGAGTGATCCTAAGATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SRAQMAAALYCNLNVSFHRPFDH*SDPKIL Trigger: CAAGATCTTAGGATCACTGCAATGGTCAAAAGGACG...ATGGAATGAGACGTTTAAATTACAATACAGAGCAGCTGCCATTTGAGCTCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTGGAGGCAAGTCCTTGTTTACAGTCTGATAGCAAGCACATGCTGGTAGTTCTAGACTTAAAGCACTaGATTAAGAACACCACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLEASPCLQSDSKHMLVVLDLKH*IKNTTN Trigger: ATTTGTGGTGTTCTTAATGCAGTGCTTTAAGTCTAG...AACTACCAGCATGTGCTTGCTATCAGACTGTAAACAAGGACTTGCCTCCAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCATCTTCCATAGGGAAGTATTTTTGATAGTTAAATTGCGGCTAACCATTATGCCCCAGTGTACGGCTTaGAATCACTGGATTCTATTA | + |
|
Preference number: 2 (lower is better) Translates to: TIFHREVFLIVKLRLTIMPQCTA*NHWILL Trigger: TAATAGAATCCAGTGATTTCAAGCCGTACACTGGGG...CATAATGGTTAGCCGCAATTTAACTATCAAAAATACTTCCCTATGGAAGATGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTGAAGGTACCATTCTGTaGAGACATTATTTTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPEGTIL*RHYFEA Trigger: GGCTTCAAAATAATGTCTTCACAGAATGGTACCTTC...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTGATCAGTTTAACTCATaGTCTCTGAGAAGTTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPDQFNS*SLRSST Trigger: GGTAGAACTTCTCAGAGATCATGAGTTAAACTGATC...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTGGCATATCTGTTACTTTATTATCTTCCTaGAGGATTTGTGAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SFYSTLTILTLVVPGISVTLLSS*RICEAG Trigger: TCCTGCCTCACAAATCCTTCAGGAAGATAATAAAGT...AACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTGGCATATCTGTTTTGTGTGTTGATTTATaGAAAGGCAAGAACAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SFYSTLTILTLVVPGISVLCVDL*KGKNNG Trigger: GCCATTGTTCTTGCCTTTTCATAAATCAACACACAA...AACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGAGCTCAAATGGCAGCTGCTCTGTATTGTAATTTAAACGTCTCATTCCATCTGGATTCTATTATATaGCTTGAAATGAGCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: SRAQMAAALYCNLNVSFHLDSII*LEMSFT Trigger: TGTGAAGCTCATTTCAAGCCATATAATAGAATCCAG...ATGGAATGAGACGTTTAAATTACAATACAGAGCAGCTGCCATTTGAGCTCTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR GCA 72 bp | CCCGTTGGGTGGAGAAGCCTCTGGAGACTGTGGGACTaGCCACCCAGTTCAGGCCCAGGTAGCCAGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: PVGWRSLWRLWD*PPSSGPGSQEL Trigger: CAGTTCCTGGCTACCTGGGCCTGAACTGGGTGGGCAGTCCCACAGTCTCCAGAGGCTTCTCCACCCAACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR CCA 72 bp | AGAGCACCCGTTGGGTGGAGAAGCCTCTGGAGACTGTaGGACTGCCCACCCAGTTCAGGCCCAGGTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPVGWRSLWRL*DCPPSSGPGSQ Trigger: CTGGCTACCTGGGCCTGAACTGGGTGGGCAGTCCCACAGTCTCCAGAGGCTTCTCCACCCAACGGGTGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR TCA 72 bp | GTGACACATGACCCAGGTAACAGATTCTGCAGCTGCTaGTGGCACATGCCAGCACCAGGATCTTCCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VTHDPGNRFCSC*WHMPAPGSSSD Trigger: GTCACTGGAAGATCCTGGTGCTGGCATGTGCCATCAGCAGCTGCAGAATCTGTTACCTGGGTCATGTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | AGTTTGCACCTGGCTCCCTTCTTTCATCCAACGCTTTaGCCACCTGCACCTAGAGACCCATTCCATGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLHLAPFFHPTL*PPAPRDPFHAD Trigger: GTCTGCATGGAATGGGTCTCTAGGTGCAGGTGGGCAAAGCGTTGGATGAAAGAAGGGAGCCAGGTGCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | GATTCTAGGGCCAACAAGGCAGCCAGGGAGAACATGTaGACATTGTCAGACCTGAGTCTTAGTGCTCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: DSRANKAARENM*TLSDLSLSAPR Trigger: GCGAGGAGCACTAAGACTCAGGTCTGACAATGTCCACATGTTCTCCCTGGCTGCCTTGTTGGCCCTAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | CCCCTGGTGGTGGGTTTTACAAGACTAGTTTGCACCTaGCTCCCTTCTTTCATCCAACGCTTTGCCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLVVGFTRLVCT*LPSFIQRFAHL Trigger: CAGGTGGGCAAAGCGTTGGATGAAAGAAGGGAGCCAGGTGCAAACTAGTCTTGTAAAACCCACCACCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGCACCTAGAGACCCATTCCATGCAGACAAAAGGGCCCAGAGGGTCTGCGGTAAACTGTGCACTTTaGGGATGGGTGCCTGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HLHLETHSMQTKGPRGSAVNCAL*GWVPVL Trigger: TAAAACAGGCACCCATCCCAAAAGTGCACAGTTTAC...CGCAGACCCTCTGGGCCCTTTTGTCTGCATGGAATGGGTCTCTAGGTGCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | GTGTTTACAGTCTGTGTAGATGCCAGCTGCCCGAAGTaGTTTACTGCTCCTCCACACCCCACTCACAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VFTVCVDASCPK*FTAPPHPTHKD Trigger: GTCTTTGTGAGTGGGGTGTGGAGGAGCAGTAAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | TCGCCCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATaGCAGCTGCCCGAAGTGCTTTACTGCTCCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SPAKLCVYSLCR*QLPEVLYCSST Trigger: TGTGGAGGAGCAGTAAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | GCAGAACCCCTGGTGGTGGGTTTTACAAGACTAGTTTaGACCTGGCTCCCTTCTTTCATCCAACGCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AEPLVVGFTRLV*TWLPSFIQRFA Trigger: GGCAAAGCGTTGGATGAAAGAAGGGAGCCAGGTGCAAACTAGTCTTGTAAAACCCACCACCAGGGGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGCACCTAGAGACCCATTCCATGCAGACAAAAGGGCCCAGAGGGTCTGCGCTCTTTGCTACTGTCTaGTATCATGGTCACAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: HLHLETHSMQTKGPRGSALFATV*YHGHSN Trigger: GTTACTGTGACCATGATACAAGACAGTAGCAAAGAG...CGCAGACCCTCTGGGCCCTTTTGTCTGCATGGAATGGGTCTCTAGGTGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | AGTCTGTGTAGATGCCAGCTGCCCGAAGTGCTTTACTaGTCCTCCACACCCCACTCACAAAGACAGCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLCRCQLPEVLY*SSTPHSQRQLN Trigger: ATTTAGCTGTCTTTGTGAGTGGGGTGTGGAGGAGCAGTAAAGCACTTCGGGCAGCTGGCATCTACACAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | CTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTaGCCGAAGTGCTTTACTGCTCCTCCACACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LSFVFTVCVDAS*PKCFTAPPHPT Trigger: AGTGGGGTGTGGAGGAGCAGTAAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | ATATTCTGTGGGCTTCACACCTCCCACACGACCCCGTaGCTCAGAAAACAGGAGTCAGTGTTTGTACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: IFCGLHTSHTTP*LRKQESVFVHQ Trigger: TTGGTGTACAAACACTGACTCCTGTTTTCTGAGCCACGGGGTCGTGTGGGAGGTGTGAAGCCCACAGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCGCTCACTTGCTGCTTTTCTTTCTAAGGTGCTCTTCGTCACAGTGTGGCAGCAAGGAGCCTTGGAATTaGCCACTGGGTTTCTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: TAHLLLFFLRCSSSQCGSKEPWN*PLGFYF Trigger: GAAGTAGAAACCCAGTGGCAAATTCCAAGGCTCCTT...GCTGCCACACTGTGACGAAGAGCACCTTAGAAAGAAAAGCAGCAAGTGAGCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTAAGCTTTGTGTTTACAGTCTGTGTAGATGCCAGCTGCCCGAAGTGCTTTTTGCTCACCGCTCACTaGCTGCTTTTCTTTCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSFVFTVCVDASCPKCFLLTAH*LLFFLR Trigger: CCTTAGAAAGAAAAGCAGCAAGTGAGCGGTGAGCAA...AAAGCACTTCGGGCAGCTGGCATCTACACAGACTGTAAACACAAAGCTTAGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | AGGAGCCTTGGAATTTGCCACTGGGTTTCTACTTCGTaGCCGAAGAACCTTATGAAAAGCAGTCCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: RSLGICHWVSTS*PKNLMKSSPDT Trigger: TGTGTCAGGACTGCTTTTCATAAGGTTCTTCGGGCACGAAGTAGAAACCCAGTGGCAAATTCCAAGGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | TTGCTCACCGCTCACTTGCTGCTTTTCTTTCTAAGGTaGTCTTCGTCACAGTGTGGCAGCTGTATCTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLTAHLLLFFLR*SSSQCGSCIFV Trigger: CACAAAGATACAGCTGCCACACTGTGACGAAGAGCACCTTAGAAAGAAAAGCAGCAAGTGAGCGGTGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | CCCTGTCAACTTGGTTACGAAGTATGTTTGTACAATTaGCTTCCTTCTACAGCCCTGGCAAGCATGGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PCQLGYEVCLYN*LPSTALASMDH Trigger: GTGGTCCATGCTTGCCAGGGCTGTAGAAGGAAGGCAATTGTACAAACATACTTCGTAACCAAGTTGACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | CCTATCAGTGCGGGCCTGCAGATCAGTTTCAATGTTTaGATAGAACACAGAAATGTTCCTACAGTGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PISAGLQISFNV*IEHRNVPTVPA Trigger: GGCTGGCACTGTAGGAACATTTCTGTGTTCTATCCAAACATTGAAACTGATCTGCAGGCCCGCACTGATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGTGAAGCAGGCATACAGAACCCTCTCTCAAACACCAGTTCTCAAGAGCACCCCAGTGTACGGCTaGAAATCACTGGATTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: SGVKQAYRTLSQTPVLKSTPVYG*KSLDSI Trigger: AATAGAATCCAGTGATTTCAAGCCGTACACTGGGGT...GCTCTTGAGAACTGGTGTTTGAGAGAGGGTTCTGTATGCCTGCTTCACTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR TCA 72 bp | TCTACAGCCCTGGCAAGCATGGACCACAGCAGAATATaGAATGTGTTCAGGAAGATGAAGCAGCTCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: STALASMDHSRI*NVFRKMKQLIH Trigger: GTGTATGAGCTGCTTCATCTTCCTGAACACATTTCATATTCTGCTGTGGTCCATGCTTGCCAGGGCTGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | CACTCACGAGGCAGAGTTTCAAGGAAGCTCACTTCCTaGAGTTTTGGCGTTCTCATACTCATACTCTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSRGRVSRKLTS*SFGVLILILYS Trigger: GGAATAGAGTATGAGTATGAGAACGCCAAAACTCCAGGAAGTGAGCTTCCTTGAAACTCTGCCTCGTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | GAAGAACACTGTGAAAGAAAGTTACTGAGGAATGGGTaGCACATGACCCAGGTAACAGATTCTGCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EEHCERKLLRNG*HMTQVTDSAAA Trigger: AGCAGCTGCAGAATCTGTTACCTGGGTCATGTGTCACCCATTCCTCAGTAACTTTCTTTCACAGTGTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | TGTATTCATGTGAGTGATCATGCCACAGTGCACATGTaGAGGTTAGAGGACAACTTCAGAGTGGGTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CIHVSDHATVHM*RLEDNFRVGSF Trigger: GAAAGAACCCACTCTGAAGTTGTCCTCTAACCTCCACATGTGCACTGTGGCATGATCACTCACATGAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR CCA 72 bp | TGTACAATTGCCTTCCTTCTACAGCCCTGGCAAGCATaGACCACAGCAGAATATGAAATGTGTTCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTIAFLLQPWQA*TTAEYEMCSGR Trigger: TCTTCCTGAACACATTTCATATTCTGCTGTGGTCCATGCTTGCCAGGGCTGTAGAAGGAAGGCAATTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTAGCTCTGGTGGCCATTaGGGCTACACAGTGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPSSGGH*GYTVKT Trigger: AGTCTTCACTGTGTAGCCCAAATGGCCACCAGAGCT...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTACTGGTGGGGAAGAGATTTTAAAGGTGGGACCTTCTCAGAAGTAGGTGAGAACATGTGGACATaGTCAGACCTGAGTCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ISYWWGRDFKGGTFSEVGENMWT*SDLSLS Trigger: ACTAAGACTCAGGTCTGACAATGTCCACATGTTCTC...ACCTACTTCTGAGAAGGTCCCACCTTTAAAATCTCTTCCCCACCAGTAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | ATGAACAGATGGCCACCCAGAAATCAAAGTGATAGGTaGCTACTTACTGTGCACAAATATGGTGACGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MNRWPPRNQSDR*LLTVHKYGDEG Trigger: TCCCTCGTCACCATATTTGTGCACAGTAAGTAGTCACCTATCACTTTGATTTCTGGGTGGCCATCTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | CTCACTCATAAACCAAGGGAGACTTTATTATCTTCCTaGAGGATTTGTGAGGCAGGAGGGGACAATCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTHKPRETLLSS*RICEAGGDNLN Trigger: GTTGAGATTGTCCCCTCCTGCCTCACAAATCCTTCAGGAAGATAATAAAGTCTCCCTTGGTTTATGAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | TCCTACTCTCCTTATACTCTGAATGTAAAGCCTAGCTaGAGCCAAAATCACGCTTCTCACTGCTTAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SYSPYTLNVKPS*SQNHASHCLGE Trigger: CTCACCTAAGCAGTGAGAAGCGTGATTTTGGCTTCAGCTAGGCTTTACATTCAGAGTATAAGGAGAGTAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | CTGTGCACAAATATGGTGACGAGGGAGTCCTACTTTTaGGACACAGTGAAAATCCTTGACCTAATACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCTNMVTRESYF*DTVKILDLIQS Trigger: GCTTTGTATTAGGTCAAGGATTTTCACTGTGTCCCAAAAGTAGGACTCCCTCGTCACCATATTTGTGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | GGACCCCCTGTAACAAGGGCGATTGCTAGCACCGTTTaGGAACATTTATTATTACTAGAAGGTAACAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GPPVTRAIASTV*EHLLLLEGNKG Trigger: TCCTTTGTTACCTTCTAGTAATAATAAATGTTCTCAAACGGTGCTAGCAATCGCCCTTGTTACAGGGGGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | ACCTGCAGTTACTGTGATTTGCGTGAGGAAAACACGTaGGCCTGCTATAATTCTATCTTCCCTTTGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TCSYCDLREENT*ACYNSIFPLVF Trigger: AAAGACCAAAGGGAAGATAGAATTATAGCAGGCTCACGTGTTTTCCTCACGCAAATCACAGTAACTGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | AAGTATGTTTGTACAATTGCCTTCCTTCTACAGCCCTaGCAAGCATGGACCACAGCAGAATATGAAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KYVCTIAFLLQP*QAWTTAEYEMC Trigger: ACACATTTCATATTCTGCTGTGGTCCATGCTTGCCAGGGCTGTAGAAGGAAGGCAATTGTACAAACATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTAGTCATAATGGCCACCCTCTAAGCTCCATGTACTGCTCTCTTTCAATGATGATTCTTTTATCTTaGCAGCTTTCCTACACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YSSHNGHPLSSMYCSLSMMILLS*QLSYTP Trigger: AGGGGTGTAGGAAAGCTGCAAAGATAAAAGAATCAT...CATTGAAAGAGAGCAGTACATGGAGCTTAGAGGGTGGCCATTATGACTAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | ATAAAAATAGGCCAGTCGCTAGAAGGTACCATTCTGTaGAGACATTATTTTGAAGCCCTAGTCAAAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IKIGQSLEGTIL*RHYFEALVKGA Trigger: GGCTCCTTTGACTAGGGCTTCAAAATAATGTCTTCACAGAATGGTACCTTCTAGCGACTGGCCTATTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | CACCCTCTAAGCTCCATGTACTGCTCTCTTTCAATGTaGTATATCAAAACTAGACGGCTTCTGACAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPLSSMYCSLSM*YIKTRRLLTVH Trigger: ATGAACTGTCAGAAGCCGTCTAGTTTTGATATATCACATTGAAAGAGAGCAGTACATGGAGCTTAGAGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | CTACAGCGAAGTATGGGAGTTACACAACATACTCAGTaGCCACAATTCTGTTATCCTACTCTCCTTATACTC | + |
|
Preference number: 3 (lower is better) Translates to: LQRSMGVTQHTQ*PQFCYPTLLIL Trigger: GAGTATAAGGAGAGTAGGATAACAGAATTGTGGTCACTGAGTATGTTGTGTAACTCCCATACTTCGCTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | ACCATTTATCACTCTGTTAGACTTTTTCATAGCCCCTaGTTCCTGGCTGGGTTATTTATGCAACATTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TIYHSVRLFHSP*FLAGLFMQHFS Trigger: GGAGAAATGTTGCATAAATAACCCAGCCAGGAAGCAGGGGCTATGAAAAAGTCTAACAGAGTGATAAATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTCCCTCCAAATTTATCTaGACAAGTCACAGATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPPSKFI*TSHRWR Trigger: TCTCCATCTGTGACTTGTCAAGATAAATTTGGAGGG...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTTTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTGGCATATCTGTTACAAACCTCCCCTCTTaGCTACTGTCTTGTATCATG | + |
|
Preference number: 3 (lower is better) Translates to: SFYSTLTILTLVVPGISVTNLPS*LLSCIM Trigger: CATGATACAAGACAGTAGCAAAGAGGGGAGGTTTGT...AACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAAAACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | GAGGGAGTCCTACTTTTGGGACACAGTGAAAATCCTTaGCCTAATACAAAGCTTAAGGTGAAATTCAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EGVLLLGHSENP*PNTKLKVKFRV Trigger: TACTCTGAATTTCACCTTAAGCTTTGTATTAGGTCAAGGATTTTCACTGTGTCCCAAAAGTAGGACTCCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | AACTGTAACAGTAGTATCTGGCTATTATCCTGTCCTTaGGTTTTCTCATGCGCCATAGTATACCTCACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NCNSSIWLLSCP*VFSCAIVYLTL Trigger: TAGAGTGAGGTATACTATGGCGCATGAGAAAACTCAAGGACAGGATAATAGCCAGATACTACTGTTACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | GGTAAAATACATGACTTTCCAGAATATAACATCCGTTaGCCTTTATGGCCACACCATACCTCACAAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GKIHDFPEYNIR*PLWPHHTSQTK Trigger: CTTAGTTTGTGAGGTATGGTGTGGCCATAAAGGTCAACGGATGTTATATTCTGGAAAGTCATGTATTTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTAACAGGAGTCAGTGTTaGTACACCAAAAATGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPNRSQC*YTKNAN Trigger: ATTAGCATTTTTGGTGTACAAACACTGACTCCTGTT...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | TACTTTAGATATTTAGGGTTTGTAAAGAAGCAGCAATaGGACAGAGTGGGTAGTCTTAAAGCACCAAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: YFRYLGFVKKQQ*DRVGSLKAPNN Trigger: ATTGTTTGGTGCTTTAAGACTACCCACTCTGTCTCATTGCTGCTTCTTTACAAACCCTAAATATCTAAAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR TCA 72 bp | TTAGCCTATCCATTAAATTCTTCGACTAGACTTCTGTaGATACCCCATGTAAATTCATTCAGGTTCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LAYPLNSSTRLL*IPHVNSFRFSL Trigger: CAAAGAGAACCTGAATGAATTTACATGGGGTATTCACAGAAGTCTAGTCGAAGAATTTAATGGATAGGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR GCA 72 bp | GATAAAGGGAATTTCTACCTATACATAGACATTTACTaGACAGCATTCATTCATCTTTACACTGTGGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DKGNFYLYIDIY*TAFIHLYTVVE Trigger: CTCTACCACAGTGTAAAGATGAATGAATGCTGTGCAGTAAATGTCTATGTATAGGTAGAAATTCCCTTTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR GCA 72 bp | ATTATTAGGCTAGTGCCTCTTCCTGCTGAACTTTGCTaGCACATCATGAGATATTATTATTATTCTAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: IIRLVPLPAELC*HIMRYYYYSNS Trigger: AGAGTTAGAATAATAATAATATCTCATGATGTGGCAGCAAAGTTCAGCAGGAAGAGGCACTAGCCTAATAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR GCA 72 bp | TCAGGAGAATCTACTAGTGTATTCCTTAGTCAACTTTaGTCACTCATAAACCAAGGGAGACTTTATTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGESTSVFLSQL*SLINQGRLYYL Trigger: AAGATAATAAAGTCTCCCTTGGTTTATGAGTGAGCAAAGTTGACTAAGGAATACACTAGTAGATTCTCCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CCA 72 bp | TTATTCTACATTGACTATTTTGACCTTAGTGGTGCCTaGCATATCTGTTGTATGCAAGTTATCAAATGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFYIDYFDLSGA*HICCMQVIKCS Trigger: ACTACATTTGATAACTTGCATACAACAGATATGCCAGGCACCACTAAGGTCAAAATAGTCAATGTAGAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGCACCTAGAGACCCATTCCATGCAGACAAAAGGGCCCAGAGGGTCTGCGGTCCAGGATGCTGGGTaGCAGGGATCGGATATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLHLETHSMQTKGPRGSAVQDAG*QGSDIS Trigger: GCTTATATCCGATCCCTGGCACCCAGCATCCTGGAC...CGCAGACCCTCTGGGCCCTTTTGTCTGCATGGAATGGGTCTCTAGGTGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | AGGGCCAACAAGGCAGCCAGGGAGAACATGTGGACATaGTCAGACCTGAGTCTTAGTGCTCCTCGCCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RANKAARENMWT*SDLSLSAPRPL Trigger: TAGCGGGCGAGGAGCACTAAGACTCAGGTCTGACAATGTCCACATGTTCTCCCTGGCTGCCTTGTTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | AGTGATCCTAAGATCTTGGATGTGCTAGAGCACCCGTaGGGTGGAGAAGCCTCTGGAGACTGTGGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDPKILDVLEHP*GGEASGDCGTA Trigger: GGCAGTCCCACAGTCTCCAGAGGCTTCTCCACCCAACGGGTGCTCTAGCACATCCAAGATCTTAGGATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR CAA 72 bp | ACACGTCCTTTTGACCATTGCAGTGATCCTAAGATCTaGGATGTGCTAGAGCACCCGTTGGGTGGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRPFDHCSDPKI*DVLEHPLGGEA Trigger: GGCTTCTCCACCCAACGGGTGCTCTAGCACATCCAAGATCTTAGGATCACTGCAATGGTCAAAAGGACGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR CAA 72 bp | GTCAAAGCTGATGGTCTAGCTAGCTCTGGTGGCCATTaGGGCTACACAGTGAAGACTGCAAGTTCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKADGLASSGGH*GYTVKTASSGL Trigger: AAGCCCTGAACTTGCAGTCTTCACTGTGTAGCCCAAATGGCCACCAGAGCTAGCTAGACCATCAGCTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | TGCAGAACCCCTGGTGGTGGGTTTTACAAGACTAGTTaGCACCTGGCTCCCTTCTTTCATCCAACGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRTPGGGFYKTS*HLAPFFHPTLC Trigger: GCAAAGCGTTGGATGAAAGAAGGGAGCCAGGTGCAAACTAGTCTTGTAAAACCCACCACCAGGGGTTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | CAAGACTACAGAGAACGAAGACTGCACGGTGCTTACTaGCTCACCGCTCACTTGCTGCTTTTCTTTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDYRERRLHGAY*LTAHLLLFFLR Trigger: CCTTAGAAAGAAAAGCAGCAAGTGAGCGGTGAGCAAGTAAGCACCGTGCAGTCTTCGTTCTCTGTAGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | CCCTATCAGTGCGGGCCTGCAGATCAGTTTCAATGTTaGGATAGAACACAGAAATGTTCCTACAGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYQCGPADQFQC*DRTQKCSYSAS Trigger: GCTGGCACTGTAGGAACATTTCTGTGTTCTATCCAAACATTGAAACTGATCTGCAGGCCCGCACTGATAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTATGATGTACTGTATTCATGTGAGTGATCATGCCACAGTGCACATGTGGGTCCAGGATGCTGGGTaGCAGGGATCGGATATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILMMYCIHVSDHATVHMWVQDAG*QGSDIS Trigger: GCTTATATCCGATCCCTGGCACCCAGCATCCTGGAC...CCACATGTGCACTGTGGCATGATCACTCACATGAATACAGTACATCATAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR CAA 72 bp | ACCCTGTCAACTTGGTTACGAAGTATGTTTGTACAATaGCCTTCCTTCTACAGCCCTGGCAAGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSTWLRSMFVQ*PSFYSPGKHGP Trigger: TGGTCCATGCTTGCCAGGGCTGTAGAAGGAAGGCAATTGTACAAACATACTTCGTAACCAAGTTGACAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGCTCAAATGGCAGCTGCTCTGTATTGTAATTTAAACGTCTCATTCCATGTCCAGGATGCTGGGTaGCAGGGATCGGATATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQMAAALYCNLNVSFHVQDAG*QGSDIS Trigger: GCTTATATCCGATCCCTGGCACCCAGCATCCTGGAC...ATGGAATGAGACGTTTAAATTACAATACAGAGCAGCTGCCATTTGAGCTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR CAA 72 bp | GCTGGCTCCTTTTTAGTTCCCTGGTCCATCATGACTTaGAGTCCCTGCCAAATGTTTTTAGGGAAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSFLVPWSIMT*SPCQMFLGKLQ Trigger: TTGGAGTTTCCCTAAAAACATTTGGCAGGGACTCAAAGTCATGATGGACCAGGGAACTAAAAAGGAGCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | GAGGCAGAGTTTCAAGGAAGCTCACTTCCTGGAGTTTaGGCGTTCTCATACTCATACTCTATTCCCGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EAEFQGSSLPGV*AFSYSYSIPAL Trigger: TAATGCGGGAATAGAGTATGAGTATGAGAACGCCAAAACTCCAGGAAGTGAGCTTCCTTGAAACTCTGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAGCAGACCAGCCAAGTCATTATTTTGGCTTTTGGGATACTTATTTCCTCGACATAAGGACTCTTaGGTTCCCCAATTCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQSRPAKSLFWLLGYLFPRHKDS*VPQFGH Trigger: GTGCCCGAATTGGGGAACGCAAGAGTCCTTATGTCG...AGGAAATAAGTATCCCAAAAGCCAAAATAATGACTTGGCTGGTCTGCTTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | TGTTCATTTCTTCGTTCTGGAGTTCCAGAAGGCGGCTaGTATTACAATAGATATGAATTCAGCATGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSFLRSGVPEGG*YYNRYEFSMEG Trigger: GCCCTCCATGCTGAATTCATATCTATTGTAATACAAGCCGCCTTCTGGAACTCCAGAACGAAGAAATGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGAGGCAAGTCCTTGTTTACAGTCTGATAGCAAGCACATGCTGGTAGTTCTTGTGAAAGTATCTTaGCAGTACACAGACCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FLEASPCLQSDSKHMLVVLVKVS*QYTDPI Trigger: AATTGGGTCTGTGTACTGGCAAGATACTTTCACAAG...AACTACCAGCATGTGCTTGCTATCAGACTGTAAACAAGGACTTGCCTCCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR CAA 72 bp | ATTATATGGCTTGAAATGAGCTTCACACACGTCCTTTaGACCATTGCAGTGATCCTAAGATCTTGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IIWLEMSFTHVL*TIAVILRSWMC Trigger: GCACATCCAAGATCTTAGGATCACTGCAATGGTCAAAAGGACGTGTGTGAAGCTCATTTCAAGCCATATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161457.8 |
||
| 3UTR CAA 72 bp | ATTAAGACCAATTTGACATGTGTCCTTTTGACTATCTaGCAAGACTACCTGGAAGCAAGACATATCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKTNLTCVLLTI*QDYLEARHILP Trigger: GGGCAGGATATGTCTTGCTTCCAGGTAGTCTTGCAAGATAGTCAAAAGGACACATGTCAAATTGGTCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | TTGCGTTCCCCTGTTGAAGAAAAGAAGACATTCCTCTaGGTTGAACGAATGACTACTATGGATATGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVEEKKTFL*VERMTTMDMIR Trigger: CCTTATCATATCCATAGTAGTCATTCGTTCAACCAAGAGGAATGTCTTCTTTTCTTCAACAGGGGAACGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012566.9 |
||
| 3UTR CAA 72 bp | TTACAAGTTTCTGAAAACACAGCCTTGACTGGCCAGTaGCCTCTACAATGTTTACAAAAGTCTCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVSENTALTGQ*PLQCLQKSQEN Trigger: ATTCTCCTGAGACTTTTGTAAACATTGTAGAGGCAACTGGCCAGTCAAGGCTGTGTTTTCAGAAACTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | GCTCAATCTCTACACATTTGCTTCAGGCCACTTTCCTaGTCAAATAAAACTGTAACAGTAGTATCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AQSLHICFRPLS*SNKTVTVVSGY Trigger: ATAGCCAGATACTACTGTTACAGTTTTATTTGACAAGGAAAGTGGCCTGAAGCAAATGTGTAGAGATTGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | ACAGGTGTAAAAAGGTTTGCAAGTGTAGATTTCAACTaGGGTAGACTACAGGAAAAGAGCATGCTTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGVKRFASVDFN*GRLQEKSMLSK Trigger: TTTAGAAAGCATGCTCTTTTCCTGTAGTCTACCCAAGTTGAAATCTACACTTGCAAACCTTTTTACACCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||
| 3UTR CAA 72 bp | CTGAAGAAATGTTGGATACAAACTTGTAAGTATCCTTaGATATTCGTCTATTCACATTCTGTGTCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKKCWIQTCKYP*IFVYSHSVSKL Trigger: CAGCTTTGACACAGAATGTGAATAGACGAATATCAAAGGATACTTACAAGTTTGTATCCAACATTTCTTCAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161568.8 |
||