Pregenerated sensors for TMEM165 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029234Ensembl transcript IDs: ENSMUST00000031144.14, ENSMUST00000130842.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTATTGCCTATCTTAAGCTaGATACTGAAGAACAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLLPILS*ILKNSL Trigger: CAAGCTGTTCTTCAGTATTCAGCTTAAGATAGGCAA...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTTATATCAAGCAGAAGTaGAGGCTGAGGTGTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: IADYWLRNMVLKVEVIHSYIKQK*RLRCQH Trigger: ATGTTGACACCTCAGCCTCCACTTCTGCTTGATATA...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| 3UTR-3UTR CCA 90 bp | ACAATCCTAATTCCCAAAGACAAGATAAAATTGCTGATTACTGGCTCAGGAATATACAAGAAAACTCAATaGTCAGCCTCACTTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TILIPKDKIKLLITGSGIYKKTQ*SASLQW Trigger: CCACTGAAGTGAGGCTGACCATTGAGTTTTCTTGTA...TATTCCTGAGCCAGTAATCAGCAATTTTATCTTGTCTTTGGGAATTAGGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| 3UTR CCA 72 bp | GTGTTTATAAGGGGGTCATGCTACAAGAAAACTCAATaGTCAGCCTCACTTCAGTGGACGCGTATATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: VFIRGSCYKKTQ*SASLQWTRISS Trigger: GCTTGATATACGCGTCCACTGAAGTGAGGCTGACCATTGAGTTTTCTTGTAGCATGACCCCCTTATAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTAGGCGCCGGCGGCTCCTaGTTCCGATGGCTCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLGAGGS*FRWLRS Trigger: AGACCTGAGCCATCGGAACCAGGAGCCGCCGGCGCC...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | ACAATCCTAATTCCCAAAGACAAGATAAAATTGCTGATTACTGGCTCAGGAATAAGGCCAAGGCCAGCATaGCCCCGGCCAGCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TILIPKDKIKLLITGSGIRPRPA*PRPAQS Trigger: TGACTGTGCTGGCCGGGGCCATGCTGGCCTTGGCCT...TATTCCTGAGCCAGTAATCAGCAATTTTATCTTGTCTTTGGGAATTAGGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTATCTTCTAGCTCCTCCTaGCCCTCATCTGGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLSSSSS*PSSGLI Trigger: GATGAGCCCAGATGAGGGTCAGGAGGAGCTAGAAGA...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTATATACACCCTGGGGATaGCTGTTGTGGCATAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLYTPWG*LLWHSQ Trigger: TTGGCTATGCCACAACAGTCATCCCCAGGGTGTATA...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTACTGCATCTTCTTTGTTaGTATGAACTGGGGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLLHLLC*YELGRL Trigger: CAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAG...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | CACTATGTACAGAAAAGAGTTGCCTATCTTAAGCTGAATACTGAAGAACAGCTTCTCCTGACCCTCATCTaGGCTCATCTTCAAACCTTC | + |
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Preference number: 4 (lower is better) Translates to: HYVQKRVAYLKLNTEEQLLLTLI*AHLQTF Trigger: GAAGGTTTGAAGATGAGCCCAGATGAGGGTCAGGAG...AAGCTGTTCTTCAGTATTCAGCTTAAGATAGGCAACTCTTTTCTGTACATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR GCA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTCGGACAGAGATCTTTTaGGCTATCATCCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IADYWLRNMVLKVEVIHSRTEIF*AIILPP Trigger: TGGAGGAAGGATGATAGCGCAAAAGATCTCTGTCCG...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | ACAATCCTAATTCCCAAAGACAAGATAAAATTGCTGATTACTGGCTCAGGAATATTTGTTGGTATGAACTaGGGCGACTGGTGTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: TILIPKDKIKLLITGSGIFVGMN*GDWCQS Trigger: GGATTGACACCAGTCGCCCCAGTTCATACCAACAAA...TATTCCTGAGCCAGTAATCAGCAATTTTATCTTGTCTTTGGGAATTAGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CCA 90 bp | ACAATCCTAATTCCCAAAGACAAGATAAAATTGCTGATTACTGGCTCAGGAATAGCAGCCACAAACGCATaGATAAATCCCAGATTCGTC | + |
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Preference number: 4 (lower is better) Translates to: TILIPKDKIKLLITGSGIAATNA*INPRFV Trigger: GACGAATCTGGGATTTATCCATGCGTTTGTGGCTGC...TATTCCTGAGCCAGTAATCAGCAATTTTATCTTGTCTTTGGGAATTAGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | CACTATGTACAGAAAAGAGTTGCCTATCTTAAGCTGAATACTGAAGAACAGCTTGGCGAAGAGTGCAGTTaGAACATAGTATGTATACAC | + |
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Preference number: 4 (lower is better) Translates to: HYVQKRVAYLKLNTEEQLGEECS*NIVCIH Trigger: GTGTATACATACTATGTTTCAACTGCACTCTTCGCC...AAGCTGTTCTTCAGTATTCAGCTTAAGATAGGCAACTCTTTTCTGTACATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTAGTTAATGTGAGCGCTTaGACAAAAATGGGTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLVNVSA*TKMGEI Trigger: TATTTCACCCATTTTTGTTCAAGCGCTCACATTAAC...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTCCAAGAACGTTAATGTaGGCGCTTGAACAAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: IADYWLRNMVLKVEVIHSPRTLM*ALEQKW Trigger: CCATTTTTGTTCAAGCGCTCACATTAACGTTCTTGG...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR TCA 90 bp | ACAATCCTAATTCCCAAAGACAAGATAAAATTGCTGATTACTGGCTCAGGAATATGTAACCACTTTTTCTaGGGTATTGCTGTGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TILIPKDKIKLLITGSGICNHFF*GIAVLV Trigger: TACAAGCACAGCAATACCTCAGAAAAAGTGGTTACA...TATTCCTGAGCCAGTAATCAGCAATTTTATCTTGTCTTTGGGAATTAGGATTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR GCA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTAAACAGGGCAGAAAATaGAAACGCCAAAAATACGAT | + |
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Preference number: 4 (lower is better) Translates to: IADYWLRNMVLKVEVIHSKQGRK*KRQKYD Trigger: ATCGTATTTTTGGCGTTTGCATTTTCTGCCCTGTTT...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 90 bp | TCTTCCTCCGGGCCGGCGCGGACCCCGGCCGGGGCCCAGAGCAACTaGAGCAGCAAGAGCACGAGCAGCCTTCGCGTCGGCGCCCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SSSGPARTPAGAQSN*SSKSTSSLRVGARP Trigger: CGGCCGGGCGCCGACGCGAAGGCTGCTCGTGCTCTTGCTGCTTCAGTTGCTCTGGGCCCCGGCCGGGGTCCGCGCCGGCCCGGAGGAAGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 90 bp | CGTCTGGGCAGCTGCATCTTCTTTGTTGGTATGAACTGGGGCGACTaGTGTCAATCCTTTCTCGGCCCGGGCCGGCTCGAGGCCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RLGSCIFFVGMNWGD*CQSFLGPGRLEALH Trigger: GTGCAGGGCCTCGAGCCGGCCCGGGCCGAGAAAGGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 90 bp | TCCCAGATTCGTCTGGGCAGCTGCATCTTCTTTGTTGGTATGAACTaGGGCGACTGGTGTCAATCCTTTCTCGGCCCGGGCCGGCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: SQIRLGSCIFFVGMN*GDWCQSFLGPGRLE Trigger: CTCGAGCCGGCCCGGGCCGAGAAAGGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS GCA 90 bp | GGCAGCCACAAACGCATGGATAAATCCCAGATTCGTCTGGGCAGCTaGATCTTCTTTGTTGGTATGAACTGGGGCGACTGGTGTCAATCC | + |
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Preference number: 5 (lower is better) Translates to: GSHKRMDKSQIRLGS*IFFVGMNWGDWCQS Trigger: GGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGATTTATCCATGCGTTTGTGGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 90 bp | CCGAGTTCGGACACTATGATGACTGATATGGCAGCCACAAACGCATaGATAAATCCCAGATTCGTCTGGGCAGCTGCATCTTCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PSSDTMMTDMAATNA*INPRFVWAAASSLL Trigger: CAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGATTTATCCATGCGTTTGTGGCTGCCATATCAGTCATCATAGTGTCCGAACTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 90 bp | AGCTATGAAAAACGTCTTGTCGCCGAGTTCGGACACTATGATGACTaGTATGGCAGCCACAAACGCATGGATAAATCCCAGATTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SYEKRLVAEFGHYDD*YGSHKRMDKSQIRL Trigger: CAGACGAATCTGGGATTTATCCATGCGTTTGTGGCTGCCATATCAGTCATCATAGTGTCCGAACTCGGCGACAAGACGTTTTTCATAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS GCA 90 bp | AATACGATGCCTCCGATGATTGTCACAGTTCGGACAGAGATCTTTTaGGCTATCATCCTTCCTCCAATTACTGCCAATCCAGTACATAAG | + |
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Preference number: 5 (lower is better) Translates to: NTMPPMIVTVRTEIF*AIILPPITANPVHK Trigger: CTTATGTACTGGATTGGCAGTAATTGGAGGAAGGATGATAGCGCAAAAGATCTCTGTCCGAACTGTGACAATCATCGGAGGCATCGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CAA 90 bp | GAAATGCTTAAGGTATACATTAAACCCCCAGTGACCAAGGAGAAAACGTGTTTAGACAATGGTAGTGAGTaGAGAGCGATCGCCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: EMLKVYIKPPVTKEKTCLDNGSE*RAIAPF Trigger: GAATGGGGCGATCGCTCTCAACTCACTACCATTGTC...TAAACACGTTTTCTCCTTGGTCACTGGGGGTTTAATGTATACCTTAAGCATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CAA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTGAGGTATTGCTGTGCTaGTACCAGTTTCAACATCTG | + |
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Preference number: 5 (lower is better) Translates to: IADYWLRNMVLKVEVIHSEVLLC*YQFQHL Trigger: CAGATGTTGAAACTGGTACAAGCACAGCAATACCTC...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CAA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTTGGCGAAGAGTGCAGTaGAAACATAGTATGTATACA | + |
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Preference number: 5 (lower is better) Translates to: IADYWLRNMVLKVEVIHSWRRVQ*KHSMYT Trigger: TGTATACATACTATGTTTCAACTGCACTCTTCGCCA...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS-3UTR CAA 90 bp | ATTGCTGATTACTGGCTCAGGAATATGGTTTTAAAAGTGGAAGTCATTCATTCTACTTTTTCTGAGGTATaGCTGTGCTTGTACCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: IADYWLRNMVLKVEVIHSTFSEV*LCLYQF Trigger: AAACTGGTACAAGCACAGCAATACCTCAGAAAAAGT...AGAATGAATGACTTCCACTTTTAAAACCATATTCCTGAGCCAGTAATCAGCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 72 bp | GGGCCGGCGCGGACCCCGGCCGGGGCCCAGAGCAACTaGAGCAGCAAGAGCACGAGCAGCCTTCGCGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GPARTPAGAQSN*SSKSTSSLRVG Trigger: GCCGACGCGAAGGCTGCTCGTGCTCTTGCTGCTTCAGTTGCTCTGGGCCCCGGCCGGGGTCCGCGCCGGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 72 bp | AGCTGCATCTTCTTTGTTGGTATGAACTGGGGCGACTaGTGTCAATCCTTTCTCGGCCCGGGCCGGCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SCIFFVGMNWGD*CQSFLGPGRLE Trigger: CTCGAGCCGGCCCGGGCCGAGAAAGGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 72 bp | CGTCTGGGCAGCTGCATCTTCTTTGTTGGTATGAACTaGGGCGACTGGTGTCAATCCTTTCTCGGCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RLGSCIFFVGMN*GDWCQSFLGPG Trigger: GCCCGGGCCGAGAAAGGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS GCA 72 bp | AAACGCATGGATAAATCCCAGATTCGTCTGGGCAGCTaGATCTTCTTTGTTGGTATGAACTGGGGCGACTGG | + |
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Preference number: 6 (lower is better) Translates to: KRMDKSQIRLGS*IFFVGMNWGDW Trigger: CCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGATTTATCCATGCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 72 bp | ATCCCAGATTCGTCTGGGCAGCTGCATCTTCTTTGTTaGTATGAACTGGGGCGACTGGTGTCAATCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: IPDSSGQLHLLC*YELGRLVSILS Trigger: AGAAAGGATTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 72 bp | AAACGTCTTGTCGCCGAGTTCGGACACTATGATGACTaGTATGGCAGCCACAAACGCATGGATAAATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: KRLVAEFGHYDD*YGSHKRMDKSQ Trigger: CTGGGATTTATCCATGCGTTTGTGGCTGCCATATCAGTCATCATAGTGTCCGAACTCGGCGACAAGACGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 72 bp | TTCTTTAACTCTGCTTGGACTTCTTCTAGCTCCTCCTaGCCCTCATCTGGGCTCATCTTCAAACCTTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: FFNSAWTSSSSS*PSSGLIFKPSR Trigger: TCGGGAAGGTTTGAAGATGAGCCCAGATGAGGGTCAGGAGGAGCTAGAAGAAGTCCAAGCAGAGTTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031144.14 ENSMUST00000130842.2 |
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| CDS CCA 72 bp | GACACTATGATGACTGATATGGCAGCCACAAACGCATaGATAAATCCCAGATTCGTCTGGGCAGCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: DTMMTDMAATNA*INPRFVWAAAS Trigger: AGATGCAGCTGCCCAGACGAATCTGGGATTTATCCATGCGTTTGTGGCTGCCATATCAGTCATCATAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CAA 72 bp | GCCTCCGATGATTGTCACAGTTCGGACAGAGATCTTTaGCGCTATCATCCTTCCTCCAATTACTGCCAATCC | + |
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Preference number: 6 (lower is better) Translates to: ASDDCHSSDRDL*RYHPSSNYCQS Trigger: GGATTGGCAGTAATTGGAGGAAGGATGATAGCGCAAAAGATCTCTGTCCGAACTGTGACAATCATCGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS GCA 72 bp | CCTCCGATGATTGTCACAGTTCGGACAGAGATCTTTTaGGCTATCATCCTTCCTCCAATTACTGCCAATCCA | + |
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Preference number: 6 (lower is better) Translates to: PPMIVTVRTEIF*AIILPPITANP Trigger: TGGATTGGCAGTAATTGGAGGAAGGATGATAGCGCAAAAGATCTCTGTCCGAACTGTGACAATCATCGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS TCA 72 bp | GTGCAGTTGAAACATAGTATGTATACACCCTGGGGATaGCTGTTGTGGCATAGCCAAACAAAACCGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: VQLKHSMYTPWG*LLWHSQTKPTS Trigger: GCTTGTCGGTTTTGTTTGGCTATGCCACAACAGTCATCCCCAGGGTGTATACATACTATGTTTCAACTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031144.14 ENSMUST00000130842.2 |
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| CDS CAA 72 bp | CTTGTACCAGTTTCAACATCTGGCCCATTTAAGAGTTaGGTTCGTTGGAATTCTTCATCCTTCTTCTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: LVPVSTSGPFKS*VRWNSSSFFFN Trigger: GTTAAAGAAGAAGGATGAAGAATTCCAACGAACCAAACTCTTAAATGGGCCAGATGTTGAAACTGGTACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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| CDS CCA 72 bp | TTGTACCAGTTTCAACATCTGGCCCATTTAAGAGTTTaGTTCGTTGGAATTCTTCATCCTTCTTCTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: LYQFQHLAHLRV*FVGILHPSSLT Trigger: AGTTAAAGAAGAAGGATGAAGAATTCCAACGAACCAAACTCTTAAATGGGCCAGATGTTGAAACTGGTACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031144.14 |
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