Pregenerated sensors for TMEM163 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026347Ensembl transcript IDs: ENSMUST00000027585.14, ENSMUST00000160616.8, ENSMUST00000185560.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTaGACCACAGGCTTCCTGTCAAGCAGAGACCCTAGCCTGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: VEVTQSVTIWFWLTV*TTGFLSSRDPSLPP Trigger: TGGAGGCAGGCTAGGGTCTCTGCTTGACAGGAAGCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR GCA 90 bp | CCAGCAGCCTGGAGCTGGAAATGGGCTCCTCTCATTCGAGTTGCCTaGTGGAGATGGGGGAATGACTCATTGAGCAGAACACTTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: PAAWSWKWAPLIRVA*WRWGNDSLSRTLAV Trigger: TACAGCAAGTGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAATGAGAGGAGCCCATTTCCAGCTCCAGGCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CCA 90 bp | AGAGAGAGAGAGCGAGCCTGCCCACAACGTGTACTCCCTACATGTTaGCACACACACTACCAGCTCTCAAATACAACCTCCCCACATCGT | + |
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Preference number: 1 (lower is better) Translates to: RERERACPQRVLPTC*HTHYQLSNTTSPHR Trigger: ACGATGTGGGGAGGTTGTATTTGAGAGCTGGTAGTGTGTGTGCCAACATGTAGGGAGTACACGTTGTGGGCAGGCTCGCTCTCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CCA 90 bp | CACAGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTaGGAAAACAAGATAAACAGATTCCCAAGACTCACAGGCTCGCTG | + |
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Preference number: 1 (lower is better) Translates to: HSTHRKPPLMVKPQY*ENKINRFPRLTGSL Trigger: CAGCGAGCCTGTGAGTCTTGGGAATCTGTTTATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR TCA 90 bp | GGCTTCCTGTCAAGCAGAGACCCTAGCCTGCCTCCAAGAACTGTTTaGCTCCAGGAAATAGAAAAATGTCACTTCCGGCTCAAGGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GFLSSRDPSLPPRTV*LQEIEKCHFRLKVG Trigger: CCCAACCTTGAGCCGGAAGTGACATTTTTCTATTTCCTGGAGTCAAACAGTTCTTGGAGGCAGGCTAGGGTCTCTGCTTGACAGGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR CCA 90 bp | AGGTTCACATCTCTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTaGGTTCTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: RFTSLKNGSWVFTDV*VLDVKERAVCLRSL Trigger: CAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAGAGATGTGAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR GCA 90 bp | GTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAAAGGGCTGTGTaGTTACGTAGCTTGTCCATGCAAAGCTCAAGATCACTAAACACT | + |
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Preference number: 1 (lower is better) Translates to: VFTDVWVLDVKERAV*LRSLSMQSSRSLNT Trigger: AGTGTTTAGTGATCTTGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAGAACCCACACATCTGTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTGATGGGCAGGTCCAGCCTCTaGCAGACCCCAGCCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: LGSMAAPPTGNVILTCLMGRSSL*QTPAHD Trigger: ATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCC...CATCAAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCTGGTGGGCGACTGGGTaGGGATGTAGGGCAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: QVEVTQSVTIWFWLTVCTWWATG*GCRAGP Trigger: TGGACCTGCCCTACATCCTCACCCAGTCGCCCACCA...GGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGGCAGGTCCAGCCTCTaGCAGACCCCAGCCCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: QHPQEAASDGETPILGKQGRSSL*QTPAHD Trigger: ATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCC...TTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATATGGTGGGCGACTGGGTaGGGATGTAGGGCAGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: THRKPPLMVKPQYWENKIWWATG*GCRAGP Trigger: TGGACCTGCCCTACATCCTCACCCAGTCGCCCACCA...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGACCTGATGTCAGCTCCACAGCACCCACAGGAAGCCGCCTCTGATGGTCCACGTCTCACAGACTaGGGTACTGTGACCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: KEDLMSAPQHPQEAASDGPRLTD*GTVTSI Trigger: TATGCTGGTCACAGTACCTCAGTCTGTGAGACGTGG...ACCATCAGAGGCGGCTTCCTGTGGGTGCTGTGGAGCTGACATCAGGTCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAGGCAGGTCCAGCCTCTaGCAGACCCCAGCCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: THRKPPLMVKPQYWENKIGRSSL*QTPAHD Trigger: ATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCC...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CAA 90 bp | GAGAGAGAGAGAGCGAGCCTGCCCACAACGTGTACTCCCTACATGTaGGCACACACACTACCAGCTCTCAAATACAACCTCCCCACATCG | + |
|
Preference number: 2 (lower is better) Translates to: ERERASLPTTCTPYM*AHTLPALKYNLPTS Trigger: CGATGTGGGGAGGTTGTATTTGAGAGCTGGTAGTGTGTGTGCCAACATGTAGGGAGTACACGTTGTGGGCAGGCTCGCTCTCTCTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGACCTGATGTCAGCTCCACAGCACCCACAGGAAGCCGCCTCTGATGGTGAAGTGCTGTACCGATaGCATCTGCTAGGAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: KEDLMSAPQHPQEAASDGEVLYR*HLLGEC Trigger: ACACTCTCCTAGCAGATGCCATCGGTACAGCACTTC...ACCATCAGAGGCGGCTTCCTGTGGGTGCTGTGGAGCTGACATCAGGTCTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAAATGTTGGCACCATCTaGCTGCGTGGAAACCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QHPQEAASDGETPILGKQNVGTI*LRGNLL Trigger: CAAGAGGTTTCCACGCAGGCAGATGGTGCCAACATT...TTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGGTAGGAGTTAGGAAGTaGTGTACCGATGGCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: STHRKPPLMVKPQYWENKVGVRK*CTDGIC Trigger: GCAGATGCCATCGGTACAGCACTTCCTAACTCCTAC...CTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCGAGTTGCCTGCTGGAGATGGGGGAATGACTCATTGAGCAGAACACTTGCTCCACGTCTCACAGACTaGGGTACTGTGACCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: IRVACWRWGNDSLSRTLAPRLTD*GTVTSI Trigger: TATGCTGGTCACAGTACCTCAGTCTGTGAGACGTGG...AGCAAGTGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTGTGCAGTTGAATGTTaGCACCATCTGCCTGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: VLDVKERAVCLRSLSMQSCAVEC*HHLPAW Trigger: CCACGCAGGCAGATGGTGCCAACATTCAACTGCACA...GCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTCATGTGCAGTTGAATGTTaGCACCATCTGCCTGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LDVKERAVCLRSLSMQSSCAVEC*HHLPAW Trigger: CCACGCAGGCAGATGGTGCCAACATTCAACTGCACA...TGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCAATGTTGGCACCATCTaGCTGCGTGGAAACCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VLDVKERAVCLRSLSMQSNVGTI*LRGNLL Trigger: CAAGAGGTTTCCACGCAGGCAGATGGTGCCAACATT...GCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGGAGCGGCCCACGTCTCACAGACTGAGGTACTGTGACCAGCATATAGAGCTCAAAAATGGCTCCTaGGTTTTTACAGATGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LKERPTSHRLRYCDQHIELKNGS*VFTDVW Trigger: CCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG...CTCTATATGCTGGTCACAGTACCTCAGTCTGTGAGACGTGGGCCGCTCCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGATAAACAGATTCCCAAGACTCACAGGCTCGCTGAACCAGCGAGCTCTAACTGGATGTGCAGTTaGATGTTGGCACCATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: KQDKQIPKTHRLAEPASSNWMCS*MLAPSA Trigger: GGCAGATGGTGCCAACATTCAACTGCACATCCAGTT...AGAGCTCGCTGGTTCAGCGAGCCTGTGAGTCTTGGGAATCTGTTTATCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAAACAACTGGATGTGCAGTTaGATGTTGGCACCATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: HRKPPLMVKPQYWENKINNWMCS*MLAPSA Trigger: GGCAGATGGTGCCAACATTCAACTGCACATCCAGTT...GTTTATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAGATAAACAGATTCCCAAGACTCACAGGCTCGCTGAACCAGCGAGCTCTAATGTTGGCACCATCTaGCTGCGTGGAAACCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: KQDKQIPKTHRLAEPASSNVGTI*LRGNLL Trigger: CAAGAGGTTTCCACGCAGGCAGATGGTGCCAACATT...AGAGCTCGCTGGTTCAGCGAGCCTGTGAGTCTTGGGAATCTGTTTATCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTTCACATCTCTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCGCAGAGACCCTAGCCTaGCTCCAAGAACTGTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: RGSHLSKMAPGFLQMCGFAETLA*LQELFD Trigger: GTCAAACAGTTCTTGGAGGCAGGCTAGGGTCTCTGC...GAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAGAGATGTGAACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAAAACTGGATGTGCAGTTaGATGTTGGCACCATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LKNGSWVFTDVWVLDVKENWMCS*MLAPSA Trigger: GGCAGATGGTGCCAACATTCAACTGCACATCCAGTT...TTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAGTTTTTACAGATGTGTaGGTTCTAGACGTGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: THRKPPLMVKPQYWENKIVFTDV*VLDVKE Trigger: TTCCTTCACGTCTAGAACCCACACATCTGTAAAAAC...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CAA 90 bp | AGACTCTATGAACGAAAACTTCCCAAAATGAAACTGGATGTGCAGTaGAATGTTGGCACCATCTGCCTGCGTGGAAACCTCTTGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RLYERKLPKMKLDVQ*NVGTICLRGNLLSS Trigger: ACTTGACAAGAGGTTTCCACGCAGGCAGATGGTGCCAACATTCAACTGCACATCCAGTTTCATTTTGGGAAGTTTTCGTTCATAGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAAACCAGCATATAGAGATATaGAGATTCGGGGTGATGATT | + |
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Preference number: 2 (lower is better) Translates to: HRKPPLMVKPQYWENKINQHIEI*RFGVMI Trigger: AATCATCACCCCGAATCTGCATATCTCTATATGCTG...GTTTATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGACTTCCGGCTCAAGGTaGGGAAGCATGGCGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: STHRKPPLMVKPQYWENKTSGSR*GSMAAP Trigger: AGGGGCCGCCATGCTTCCCAACCTTGAGCCGGAAGT...CTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CCA 72 bp | CCAGGAAATAGAAAAATGTCACTTCCGGCTCAAGGTTaGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCA | + |
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Preference number: 3 (lower is better) Translates to: PGNRKMSLPAQG*EAWRPLPRATS Trigger: TGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTTGAGCCGGAAGTGACATTTTTCTATTTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTCAACTTCCGGCTCAAGGTaGGGAAGCATGGCGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LDVKERAVCLRSLSMQSSTSGSR*GSMAAP Trigger: AGGGGCCGCCATGCTTCCCAACCTTGAGCCGGAAGT...TGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR CCA 72 bp | CAGGTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTaGCTGACAGTGTGCACCACAGGCTTCCTGTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QVEVTQSVTIWF*LTVCTTGFLSS Trigger: GCTTGACAGGAAGCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR CCA 72 bp | GAGCGAGCCTGCCCACAACGTGTACTCCCTACATGTTaGCACACACACTACCAGCTCTCAAATACAACCTCC | + |
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Preference number: 3 (lower is better) Translates to: ERACPQRVLPTC*HTHYQLSNTTS Trigger: GGAGGTTGTATTTGAGAGCTGGTAGTGTGTGTGCCAACATGTAGGGAGTACACGTTGTGGGCAGGCTCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTAAACTGGATGTGCAGTaGAATGTTGGCACCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: KVGKHGGPSHGQRHPNMFKLDVQ*NVGTIC Trigger: GCAGATGGTGCCAACATTCAACTGCACATCCAGTTT...AAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR GCA 72 bp | ACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTaGACCACAGGCTTCCTGTCAAGCAGAGACCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: TQSVTIWFWLTV*TTGFLSSRDPS Trigger: GCTAGGGTCTCTGCTTGACAGGAAGCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR GCA 72 bp | ACAAAGGAAACAGAGGAGAGAGAGAGAGAGCGAGCCTaGCCACAACGTGTACTCCCTACATGTTGGCACACA | + |
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Preference number: 3 (lower is better) Translates to: TKETEERERERA*PQRVLPTCWHT Trigger: TGTGTGCCAACATGTAGGGAGTACACGTTGTGGGCAGGCTCGCTCTCTCTCTCTCTCCTCTGTTTCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR GCA 72 bp | TGGAGCTGGAAATGGGCTCCTCTCATTCGAGTTGCCTaGTGGAGATGGGGGAATGACTCATTGAGCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: WSWKWAPLIRVA*WRWGNDSLSRT Trigger: TGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAATGAGAGGAGCCCATTTCCAGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR CCA 72 bp | ACATGTCAGGTGGAGGTGACCCAGTCAGTTACTATCTaGTTTTGGCTGACAGTGTGCACCACAGGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TCQVEVTQSVTI*FWLTVCTTGFL Trigger: CAGGAAGCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTGACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCTAACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGAAACTGGATGTGCAGTaGAATGTTGGCACCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: HPNMFDGGRLGEDVGQVQKLDVQ*NVGTIC Trigger: GCAGATGGTGCCAACATTCAACTGCACATCCAGTTT...CTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTTAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
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| 3UTR TCA 72 bp | ATTGAGCAGAACACTTGCTGTACAAAAAGGAAGACCTaGTGTCAGCTCCACAGCACCCACAGGAAGCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: IEQNTCCTKRKT*CQLHSTHRKPP Trigger: AGGCGGCTTCCTGTGGGTGCTGTGGAGCTGACATCAGGTCTTCCTTTTTGTACAGCAAGTGTTCTGCTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAAACGTCATCCTAACATGTTaGATGGTGGGCGACTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: HRKPPLMVKPQYWENKINVILTC*MVGDWV Trigger: CACCCAGTCGCCCACCATCAAACATGTTAGGATGAC...GTTTATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAGTGTGCTTACGTAGCTaGTCCATGCAAAGCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: THRKPPLMVKPQYWENKIVCLRS*SMQSSR Trigger: TCTTGAGCTTTGCATGGACAAGCTACGTAAGCACAC...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| 3UTR TCA 72 bp | TCAAGCAGAGACCCTAGCCTGCCTCCAAGAACTGTTTaGCTCCAGGAAATAGAAAAATGTCACTTCCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRDPSLPPRTV*LQEIEKCHFRL Trigger: GAGCCGGAAGTGACATTTTTCTATTTCCTGGAGTCAAACAGTTCTTGGAGGCAGGCTAGGGTCTCTGCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR TCA 72 bp | TTCGAGTTGCCTGCTGGAGATGGGGGAATGACTCATTaGGCAGAACACTTGCTGTACAAAAAGGAAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: FELPAGDGGMTH*AEHLLYKKEDL Trigger: CAGGTCTTCCTTTTTGTACAGCAAGTGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| 3UTR TCA 72 bp | TCCTCTCATTCGAGTTGCCTGCTGGAGATGGGGGAATaGCTCATTGAGCAGAACACTTGCTGTACAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSHSSCLLEMGE*LIEQNTCCTKR Trigger: CCTTTTTGTACAGCAAGTGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAATGAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTCAGCCTCCAAGAACTGTTaGACTCCAGGAAATAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDVKERAVCLRSLSMQSSASKNC*TPGNRK Trigger: TTTTCTATTTCCTGGAGTCAAACAGTTCTTGGAGGC...TGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR CCA 72 bp | ACTTCCCAAAATGAAACTGGATGTGCAGTTGAATGTTaGCACCATCTGCCTGCGTGGAAACCTCTTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSQNETGCAVEC*HHLPAWKPLVK Trigger: CTTGACAAGAGGTTTCCACGCAGGCAGATGGTGCCAACATTCAACTGCACATCCAGTTTCATTTTGGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR CCA 72 bp | TCTCTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTaGGTTCTAGACGTGAAGGAAAGGGCTGTGTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLKNGSWVFTDV*VLDVKERAVCL Trigger: TAAGCACACAGCCCTTTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR CCA 72 bp | ACAAATAAATGTTTAGAGGTTCACATCTCTCAAAAATaGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: TNKCLEVHISQK*LLGFYRCVGSR Trigger: TCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAGAGATGTGAACCTCTAAACATTTATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTACTGGCCGCTCTCGCTaGTCCGTGGCTGCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVGKHGGPSHGQRHPNMFTGRSR*SVAAFP Trigger: AGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGT...AAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGAACCCGTCGCTGAACTaGCCGCTCTCGCTGATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMNPSLN*PLSLIR Trigger: ACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTT...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTGATGGTGGGCGACTGGCTGCACTTAGAAGGATaGAGAAGCCCATCACGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAPPTGNVILTCLMVGDWLHLEG*RSPSRP Trigger: GGGGCGTGATGGGCTTCTCCATCCTTCTAAGTGCAG...CCAGTCGCCCACCATCAAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACTGGCCGCTCTCGCTaGTCCGTGGCTGCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVEVTQSVTIWFWLTVCTTGRSR*SVAAFP Trigger: AGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGT...GGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | CATCCTAACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGAGTGAAGGCGGCCACTaGCAGGGCCAGGGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPNMFDGGRLGEDVGQVQSEGGH*QGQGDN Trigger: ATTGTCACCCTGGCCCTGGCAGTGGCCGCCTTCACT...CTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTTAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGCTGCACTTAGAAGGATaGAGAAGCCCATCACGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMLHLEG*RSPSRP Trigger: GGGGCGTGATGGGCTTCTCCATCCTTCTAAGTGCAG...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGAGTGAAGGCGGCCACTaGCAGGGCCAGGGTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: STHRKPPLMVKPQYWENKSEGGH*QGQGDN Trigger: ATTGTCACCCTGGCCCTGGCAGTGGCCGCCTTCACT...CTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGCAGGATGGCATCAAATaGAAACCCGAAGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMQDGIK*KPEGRG Trigger: GCCTCTGCCTTCGGGTTTGCATTTGATGCCATCCTG...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTTCAGGACACCAATGCTaGCGTCCAGGTACCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KVGKHGGPSHGQRHPNMFSGHQC*RPGTRL Trigger: CAGTCTGGTACCTGGACGGCAGCATTGGTGTCCTGA...AAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGACCTGATGTCAGCTCCACAGCACCCACAGGAAGCCGCCTCTGATGGTTCAGGACACCAATGCTaGCGTCCAGGTACCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEDLMSAPQHPQEAASDGSGHQC*RPGTRL Trigger: CAGTCTGGTACCTGGACGGCAGCATTGGTGTCCTGA...ACCATCAGAGGCGGCTTCCTGTGGGTGCTGTGGAGCTGACATCAGGTCTTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR GCA 90 bp | AACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGCCTCTGTCAGGACACCAATGCTaGCGTCCAGGTACCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NMFDGGRLGEDVGQVQPLSGHQC*RPGTRL Trigger: CAGTCTGGTACCTGGACGGCAGCATTGGTGTCCTGA...CAGAGGCTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGCAATCAGGACACCAATaGTGCCGTCCAGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMQSGHQ*CRPGTR Trigger: TCTGGTACCTGGACGGCAGCATTGGTGTCCTGATTG...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | AACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGCCTCTGGCTCTCGCTGATCCGTaGCTGCCTTTCCTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMFDGGRLGEDVGQVQPLALADP*LPFLIR Trigger: TCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGC...CAGAGGCTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | AACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGCCTCTGAACGCCAGAGGACAATaGCCGAGGACAGCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NMFDGGRLGEDVGQVQPLNARGQ*PRTAHP Trigger: TGGATGTGCTGTCCTCGGCCATTGTCCTCTGGCGTT...CAGAGGCTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTGATGAACGCCAGAGGACAATaGCCGAGGACAGCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSMAAPPTGNVILTCLMNARGQ*PRTAHP Trigger: TGGATGTGCTGTCCTCGGCCATTGTCCTCTGGCGTT...CATCAAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGGAGGTTTCAGCCGGGTaGTGCTTTCTAGTAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMEVSAG*CFLVNL Trigger: GAGGTTTACTAGAAAGCAGCACCCGGCTGAAACCTC...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGATAAACAGATTCCCAAGACTCACAGGCTCGCTGAACCAGCGAGCTCTACTGGCCGCTCTCGCTaGTCCGTGGCTGCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQDKQIPKTHRLAEPASSTGRSR*SVAAFP Trigger: AGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGT...AGAGCTCGCTGGTTCAGCGAGCCTGTGAGTCTTGGGAATCTGTTTATCTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR TCA 90 bp | AACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGCCTCTGAGATCACCCCCAAGATaGCACAGGCTATATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NMFDGGRLGEDVGQVQPLRSPPR*HRLYTP Trigger: GGGAGTATATAGCCTGTGTCATCTTGGGGGTGATCT...CAGAGGCTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTGATGGTGGGCGACTGGCACTATGCATATAGATaGCAGAAGAAAGATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAPPTGNVILTCLMVGDWHYAYR*QKKDHP Trigger: GGGGTGATCTTTCTTCTGTCATCTATATGCATAGTG...CCAGTCGCCCACCATCAAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTCGTAGGCAAAGATGGTaGGACCAATCAGGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVGKHGGPSHGQRHPNMFRRQRW*DQSGHQ Trigger: TTGGTGTCCTGATTGGTCTCACCATCTTTGCCTACG...AAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | CTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTCAAACCCGTCGCTGAACTaGCCGCTCTCGCTGATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LDVKERAVCLRSLSMQSSNPSLN*PLSLIR Trigger: ACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTT...TGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCCTGCACTTAGAAGGATaGAGAAGCCCATCACGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVEVTQSVTIWFWLTVCTLHLEG*RSPSRP Trigger: GGGGCGTGATGGGCTTCTCCATCCTTCTAAGTGCAG...GGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGAGGGAGCAGCCTAGTTaGGAGGTCATGGATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STHRKPPLMVKPQYWENKREQPS*EVMDGF Trigger: AAAGCCATCCATGACCTCTCAACTAGGCTGCTCCCT...CTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAAGGGAGCAGCCTAGTTaGGAGGTCATGGATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHPQEAASDGETPILGKQREQPS*EVMDGF Trigger: AAAGCCATCCATGACCTCTCAACTAGGCTGCTCCCT...TTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCCAGGATGGCATCAAATaGAAACCCGAAGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGQDGIK*KPEGRG Trigger: GCCTCTGCCTTCGGGTTTGCATTTGATGCCATCCTG...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR CAA 72 bp | AGAGCGAGCCTGCCCACAACGTGTACTCCCTACATGTaGGCACACACACTACCAGCTCTCAAATACAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RASLPTTCTPYM*AHTLPALKYNL Trigger: GAGGTTGTATTTGAGAGCTGGTAGTGTGTGTGCCAACATGTAGGGAGTACACGTTGTGGGCAGGCTCGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGCACTATGCATATAGATaGCAGAAGAAAGATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMHYAYR*QKKDHP Trigger: GGGGTGATCTTTCTTCTGTCATCTATATGCATAGTG...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGTTAGAATGGAGACGCTaGACAGGAAATCATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CRAGPASGRPQPMMTDSMLEWRR*TGNHPL Trigger: AAGTGGATGATTTCCTGTTCAGCGTCTCCATTCTAA...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTGATGCTGCTGCGTTGTGTTTaGACACTTCTGCACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSMAAPPTGNVILTCLMLLRCV*TLLHLE Trigger: TTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAG...CATCAAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCCGTAGGCAAAGATGGTaGGACCAATCAGGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVEVTQSVTIWFWLTVCTRRQRW*DQSGHQ Trigger: TTGGTGTCCTGATTGGTCTCACCATCTTTGCCTACG...GGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCGAGGTTTCAGCCGGGTaGTGCTTTCTAGTAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGEVSAG*CFLVNL Trigger: GAGGTTTACTAGAAAGCAGCACCCGGCTGAAACCTC...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | CTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCTCAGCTCTCGCTGATCCGTaGCTGCCTTTCCTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDVKERAVCLRSLSMQSSALADP*LPFLIR Trigger: TCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGC...TGAGCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGACCTGATGTCAGCTCCACAGCACCCACAGGAAGCCGCCTCTGATGGTCTAGTTGAGAGGTCATaGATGGCTTTGACCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: KEDLMSAPQHPQEAASDGLVERS*MALTTM Trigger: CATAGTGGTCAAAGCCATCCATGACCTCTCAACTAG...ACCATCAGAGGCGGCTTCCTGTGGGTGCTGTGGAGCTGACATCAGGTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGACGTGAAGGAAAGGGCTGTGTGCTTACGTAGCTTGTCCATGCAAAGCCAGGATGGCATCAAATaGAAACCCGAAGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLDVKERAVCLRSLSMQSQDGIK*KPEGRG Trigger: GCCTCTGCCTTCGGGTTTGCATTTGATGCCATCCTG...GCTTTGCATGGACAAGCTACGTAAGCACACAGCCCTTTCCTTCACGTCTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATACAATCAGGACACCAATaGTGCCGTCCAGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRKPPLMVKPQYWENKIQSGHQ*CRPGTR Trigger: TCTGGTACCTGGACGGCAGCATTGGTGTCCTGATTG...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAAAATGAAACTGGATGTGCAGTTGAATGTTGGCACCATCTGCCTGCGTGGCAATCAGGACACCAATaGTGCCGTCCAGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQNETGCAVECWHHLPAWQSGHQ*CRPGTR Trigger: TCTGGTACCTGGACGGCAGCATTGGTGTCCTGATTG...CCACGCAGGCAGATGGTGCCAACATTCAACTGCACATCCAGTTTCATTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTAACATGTTTGATGGTGGGCGACTGGGTGAGGATGTAGGGCAGGTCCAGCTAGTTGAGAGGTCATaGATGGCTTTGACCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: HPNMFDGGRLGEDVGQVQLVERS*MALTTM Trigger: CATAGTGGTCAAAGCCATCCATGACCTCTCAACTAG...CTGGACCTGCCCTACATCCTCACCCAGTCGCCCACCATCAAACATGTTAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCCTGCTGCGTTGTGTTTaGACACTTCTGCACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGLLRCV*TLLHLE Trigger: TTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAG...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATAGAGGTTTCAGCCGGGTaGTGCTTTCTAGTAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: THRKPPLMVKPQYWENKIEVSAG*CFLVNL Trigger: GAGGTTTACTAGAAAGCAGCACCCGGCTGAAACCTC...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAACACTATGCATATAGATaGCAGAAGAAAGATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHPQEAASDGETPILGKQHYAYR*QKKDHP Trigger: GGGGTGATCTTTCTTCTGTCATCTATATGCATAGTG...TTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAAAACGCCAGAGGACAATaGCCGAGGACAGCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGSWVFTDVWVLDVKENARGQ*PRTAHP Trigger: TGGATGTGCTGTCCTCGGCCATTGTCCTCTGGCGTT...TTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACAGGAAGCCGCCTCTGATGGTGAAACCCCAATACTGGGAAAACAAGATACTAGTTGAGAGGTCATaGATGGCTTTGACCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: THRKPPLMVKPQYWENKILVERS*MALTTM Trigger: CATAGTGGTCAAAGCCATCCATGACCTCTCAACTAG...TATCTTGTTTTCCCAGTATTGGGGTTTCACCATCAGAGGCGGCTTCCTGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAAAGATCACCCCCAAGATaGCACAGGCTATATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKNGSWVFTDVWVLDVKERSPPR*HRLYTP Trigger: GGGAGTATATAGCCTGTGTCATCTTGGGGGTGATCT...TTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCATGATGACAGACTCTATGAACGAAAACTTCCCAAAATGAAACTGGATAGGGAGCAGCCTAGTTaGGAGGTCATGGATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAHDDRLYERKLPKMKLDREQPS*EVMDGF Trigger: AAAGCCATCCATGACCTCTCAACTAGGCTGCTCCCT...ATCCAGTTTCATTTTGGGAAGTTTTCGTTCATAGAGTCTGTCATCATGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAACGTAGGCAAAGATGGTaGGACCAATCAGGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGSWVFTDVWVLDVKERRQRW*DQSGHQ Trigger: TTGGTGTCCTGATTGGTCTCACCATCTTTGCCTACG...TTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| 3UTR CAA 72 bp | ATTCGAGTTGCCTGCTGGAGATGGGGGAATGACTCATaGAGCAGAACACTTGCTGTACAAAAAGGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: IRVACWRWGNDS*SRTLAVQKGRP Trigger: AGGTCTTCCTTTTTGTACAGCAAGTGTTCTGCTCAATGAGTCATTCCCCCATCTCCAGCAGGCAACTCGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 |
||
| CDS-3UTR CCA 90 bp | GACAGACTCTATGAACGAAAACTTCCCAAAATGAAACTGGATGTGCAGTTGAATGCTCTCGCTGATCCGTaGCTGCCTTTCCTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRLYERKLPKMKLDVQLNALADP*LPFLIR Trigger: TCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGC...ATTCAACTGCACATCCAGTTTCATTTTGGGAAGTTTTCGTTCATAGAGTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCATGATGACAGACTCTATGAACGAAAACTTCCCAAAATGAAACTGGATCTGCTGCGTTGTGTTTaGACACTTCTGCACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAHDDRLYERKLPKMKLDLLRCV*TLLHLE Trigger: TTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAG...ATCCAGTTTCATTTTGGGAAGTTTTCGTTCATAGAGTCTGTCATCATGGGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR TCA 90 bp | GACAGACTCTATGAACGAAAACTTCCCAAAATGAAACTGGATGTGCAGTTGAATTTAGAATGGAGACGCTaGACAGGAAATCATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DRLYERKLPKMKLDVQLNLEWRR*TGNHPL Trigger: AAGTGGATGATTTCCTGTTCAGCGTCTCCATTCTAA...ATTCAACTGCACATCCAGTTTCATTTTGGGAAGTTTTCGTTCATAGAGTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 90 bp | TCTTCCAACCCGTCGCTGAACTGGCCGCTCTCGCTGATCCGTGGCTaGCTTTCCTCATCAGACTGCACAGAGGAGCTCATCGGAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSNPSLNWPLSLIRG*LSSSDCTEELIGAG Trigger: CCCGGCTCCGATGAGCTCCTCTGTGCAGTCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTTGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CCA 90 bp | TCGGTCTTCCAACCCGTCGCTGAACTGGCCGCTCTCGCTGATCCGTaGCTGCCTTTCCTCATCAGACTGCACAGAGGAGCTCATCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFQPVAELAALADP*LPFLIRLHRGAHRS Trigger: GCTCCGATGAGCTCCTCTGTGCAGTCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTTGGAAGACCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CCA 90 bp | GTGCTGCTTTCTAGTAAACCTCGGTCTTCCAACCCGTCGCTGAACTaGCCGCTCTCGCTGATCCGTGGCTGCCTTTCCTCATCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSSKPRSSNPSLN*PLSLIRGCLSSSDC Trigger: GCAGTCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTTGGAAGACCGAGGTTTACTAGAAAGCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGCTATATACTCCCTGTTaGCAGAGTGCACAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGPASGRPQPMMTDSMLYTPC*QSAQQP Trigger: CGGCTGCTGTGCACTCTGCAAACAGGGAGTATATAG...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS TCA 90 bp | GGACACCAATGCTGCCGTCCAGGTACCAGACTGCTGCGTTGTGTTTaGACACTTCTGCACTTAGAAGGATGGAGAAGCCCATCACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHQCCRPGTRLLRCV*TLLHLEGWRSPSRP Trigger: GGGGCGTGATGGGCTTCTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCATTGGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 90 bp | CACAGGCTATATACTCCCTGTTTGCAGAGTGCACAGCAGCCGCATTaGTGTAACGCCAGAGGACAATGGCCGAGGACAGCACATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HRLYTPCLQSAQQPH*CNARGQWPRTAHPG Trigger: TCCTGGATGTGCTGTCCTCGGCCATTGTCCTCTGGCGTTACAGCAATGCGGCTGCTGTGCACTCTGCAAACAGGGAGTATATAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGGGCAGGTCCAGCCTCTGGCAGACCCCAGCCCATGATGACAGACTCTATGTACCAGACTGCTGCGTaGTGTTTGAACACTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRAGPASGRPQPMMTDSMYQTAA*CLNTSA Trigger: TGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTA...CATAGAGTCTGTCATCATGGGCTGGGGTCTGCCAGAGGCTGGACCTGCCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCCTATATACTCCCTGTTaGCAGAGTGCACAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGLYTPC*QSAQQP Trigger: CGGCTGCTGTGCACTCTGCAAACAGGGAGTATATAG...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAATGAAACTGGATGTGCAGTTGAATGTTGGCACCATCTGCCTGCGTGGCTATATACTCCCTGTTaGCAGAGTGCACAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SQNETGCAVECWHHLPAWLYTPC*QSAQQP Trigger: CGGCTGCTGTGCACTCTGCAAACAGGGAGTATATAG...CCACGCAGGCAGATGGTGCCAACATTCAACTGCACATCCAGTTTCATTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTTGGGAAGCATGGCGGCCCCTCCCACGGGCAACGTCATCCTAACATGTTTAGGTCATGGATGGCTTaGACCACTATGCATATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVGKHGGPSHGQRHPNMFRSWMA*TTMHID Trigger: ATCTATATGCATAGTGGTCAAAGCCATCCATGACCT...AAACATGTTAGGATGACGTTGCCCGTGGGAGGGGCCGCCATGCTTCCCAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCTACCAGACTGCTGCGTaGTGTTTGAACACTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGYQTAA*CLNTSA Trigger: TGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTA...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGACCCAGTCAGTTACTATCTGGTTTTGGCTGACAGTGTGCACCACAGGCAGGTCATGGATGGCTTaGACCACTATGCATATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EVTQSVTIWFWLTVCTTGRSWMA*TTMHID Trigger: ATCTATATGCATAGTGGTCAAAGCCATCCATGACCT...GCCTGTGGTGCACACTGTCAGCCAAAACCAGATAGTAACTGACTGGGTCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAATGGCTCCTGGGTTTTTACAGATGTGTGGGTTCTAGACGTGAAGGAATACCAGACTGCTGCGTaGTGTTTGAACACTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKNGSWVFTDVWVLDVKEYQTAA*CLNTSA Trigger: TGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTA...TTCCTTCACGTCTAGAACCCACACATCTGTAAAAACCCAGGAGCCATTTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 72 bp | CCGTCGCTGAACTGGCCGCTCTCGCTGATCCGTGGCTaGCTTTCCTCATCAGACTGCACAGAGGAGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PSLNWPLSLIRG*LSSSDCTEELI Trigger: GATGAGCTCCTCTGTGCAGTCTGATGAGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGTTCAGCGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 72 bp | GCTGTACCTCATGACGGAGACAGTGAAGGCGGCCACTaGCAGGGCCAGGGTGACAATAATGGACAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVPHDGDSEGGH*QGQGDNNGQPG Trigger: TCCTGGCTGTCCATTATTGTCACCCTGGCCCTGGCAGTGGCCGCCTTCACTGTCTCCGTCATGAGGTACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 90 bp | GCACTTAGAAGGATGGAGAAGCCCATCACGCCCCCAACAAGGGAGTaGAACCCGTCTGTGATGAGAGCCCTGCTTGTCAGGACCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRRMEKPITPPTRE*NPSVMRALLVRTFP Trigger: GGGGAAGGTCCTGACAAGCAGGGCTCTCATCACAGACGGGTTCAACTCCCTTGTTGGGGGCGTGATGGGCTTCTCCATCCTTCTAAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CCA 72 bp | TCTAGTAAACCTCGGTCTTCCAACCCGTCGCTGAACTaGCCGCTCTCGCTGATCCGTGGCTGCCTTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSKPRSSNPSLN*PLSLIRGCLSS Trigger: TGAGGAAAGGCAGCCACGGATCAGCGAGAGCGGCCAGTTCAGCGACGGGTTGGAAGACCGAGGTTTACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CCA 72 bp | GCCAGAGGACAATGGCCGAGGACAGCACATCCAGGATaGCATCAAATGCAAACCCGAAGGCAGAGGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARGQWPRTAHPG*HQMQTRRQRRC Trigger: ACAGCGCCTCTGCCTTCGGGTTTGCATTTGATGCCATCCTGGATGTGCTGTCCTCGGCCATTGTCCTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 72 bp | AGGATGGAGAAGCCCATCACGCCCCCAACAAGGGAGTaGAACCCGTCTGTGATGAGAGCCCTGCTTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMEKPITPPTRE*NPSVMRALLVR Trigger: CCTGACAAGCAGGGCTCTCATCACAGACGGGTTCAACTCCCTTGTTGGGGGCGTGATGGGCTTCTCCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CCA 72 bp | GCACAGCAGCCGCATTGCTGTAACGCCAGAGGACAATaGCCGAGGACAGCACATCCAGGATGGCATCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: AQQPHCCNARGQ*PRTAHPGWHQM Trigger: CATTTGATGCCATCCTGGATGTGCTGTCCTCGGCCATTGTCCTCTGGCGTTACAGCAATGCGGCTGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 72 bp | TATACTCCCTGTTTGCAGAGTGCACAGCAGCCGCATTaGTGTAACGCCAGAGGACAATGGCCGAGGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YTPCLQSAQQPH*CNARGQWPRTA Trigger: TGCTGTCCTCGGCCATTGTCCTCTGGCGTTACAGCAATGCGGCTGCTGTGCACTCTGCAAACAGGGAGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 90 bp | AGGACACCAATGCTGCCGTCCAGGTACCAGACTGCTGCGTTGTGTTaGAACACTTCTGCACTTAGAAGGATGGAGAAGCCCATCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTPMLPSRYQTAALC*NTSALRRMEKPITP Trigger: GGGCGTGATGGGCTTCTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCATTGGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS GCA 72 bp | CACCCCCAAGATGACACAGGCTATATACTCCCTGTTTaGAGAGTGCACAGCAGCCGCATTGCTGTAACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HPQDDTGYILPV*RVHSSRIAVTP Trigger: TGGCGTTACAGCAATGCGGCTGCTGTGCACTCTGCAAACAGGGAGTATATAGCCTGTGTCATCTTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS TCA 72 bp | TGCTGCCGTCCAGGTACCAGACTGCTGCGTTGTGTTTaGACACTTCTGCACTTAGAAGGATGGAGAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CCRPGTRLLRCV*TLLHLEGWRSP Trigger: TGGGCTTCTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 72 bp | ATGCTGCCGTCCAGGTACCAGACTGCTGCGTTGTGTTaGAACACTTCTGCACTTAGAAGGATGGAGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLPSRYQTAALC*NTSALRRMEKP Trigger: GGGCTTCTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 90 bp | CCAATCAGGACACCAATGCTGCCGTCCAGGTACCAGACTGCTGCGTaGTGTTTGAACACTTCTGCACTTAGAAGGATGGAGAAGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PIRTPMLPSRYQTAA*CLNTSALRRMEKPI Trigger: GATGGGCTTCTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCATTGGTGTCCTGATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS CAA 72 bp | ACACCAATGCTGCCGTCCAGGTACCAGACTGCTGCGTaGTGTTTGAACACTTCTGCACTTAGAAGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPMLPSRYQTAA*CLNTSALRRME Trigger: CTCCATCCTTCTAAGTGCAGAAGTGTTCAAACACAACGCAGCAGTCTGGTACCTGGACGGCAGCATTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS TCA 72 bp | GAGGTCATGGATGGCTTTGACCACTATGCATATAGATaGCAGAAGAAAGATCACCCCCAAGATGACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVMDGFDHYAYR*QKKDHPQDDTG Trigger: GCCTGTGTCATCTTGGGGGTGATCTTTCTTCTGTCATCTATATGCATAGTGGTCAAAGCCATCCATGACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||
| CDS TCA 72 bp | GAACAGGAAATCATCCACTTCAGGGAGCAGCCTAGTTaGGAGGTCATGGATGGCTTTGACCACTATGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: EQEIIHFREQPS*EVMDGFDHYAY Trigger: ATATGCATAGTGGTCAAAGCCATCCATGACCTCTCAACTAGGCTGCTCCCTGAAGTGGATGATTTCCTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027585.14 ENSMUST00000160616.8 ENSMUST00000185560.2 |
||