Pregenerated sensors for TMEM161B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035762Ensembl transcript IDs: ENSMUST00000057495.10, ENSMUST00000223827.2, ENSMUST00000223862.2, ENSMUST00000225069.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTaGAGAGAGCCCTCTCACATTAGTTCTCTCAATGAGTTACAATTC | + |
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Preference number: 1 (lower is better) Translates to: WRFATVNQDNQKDYP*REPSHISSLNELQF Trigger: GAATTGTAACTCATTGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGAGGTGCCACATACTaGAGGGCAATGACACACAGG | + |
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Preference number: 2 (lower is better) Translates to: TVNQDNQKDYPCREPSHIRGATY*RAMTHR Trigger: CCTGTGTGTCATTGCCCTGCAGTATGTGGCACCTCT...AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCAGAAAGGGAGTGGATCTGGGTGTGAGAGGAGGTGAGCAGAAAGAGGAGAGTCTAACAGACTGTTaGAGGTTTGCAACTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: RVRKGVDLGVRGGEQKEESLTDC*RFATVN Trigger: GTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACT...CTCCTCTTTCTGCTCACCTCCTCTCACACCCAGATCCACTCCCTTTCTGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057495.10 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTACAGAAGGATTACCCCTaGAGAGAGCCCTCTCACATT | + |
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Preference number: 2 (lower is better) Translates to: ARPKTNSETADVHMANHLQKDYP*REPSHI Trigger: AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTG...TAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTGGGAAAGGCGGCTTCTaGATAAATTCCCCAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: NQDNQKDYPCREPSHISSGKGGF*INSPGM Trigger: CATTCCTGGGGAATTTATCCAGAAGCCGCCTTTCCC...AGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATAGTACCACAACACCATaGAAAGCAGTCAGTAACTGG | + |
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Preference number: 2 (lower is better) Translates to: TARPKTNSETADVHMANHSTTTP*KAVSNW Trigger: CCAGTTACTGACTGCTTTTCATGGTGTTGTGGTACT...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATCATACTGCAGGGCAATaGCACACAGGTAGTAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TARPKTNSETADVHMANHHTAGQ*HTGSKR Trigger: TCTTTTACTACCTGTGTGTCATTGCCCTGCAGTATG...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAAATACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGAGAGGTGCCACATACTaGAGGGCAATGACACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: NKIQQGPKLTVRPLMFIWRGATY*RAMTHR Trigger: CCTGTGTGTCATTGCCCTGCAGTATGTGGCACCTCT...CCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTACCACAACACCATaGAAAGCAGTCAGTAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: TVNQDNQKDYPCREPSHISTTTP*KAVSNW Trigger: CCAGTTACTGACTGCTTTTCATGGTGTTGTGGTACT...AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAAATACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCAGAAGGATTACCCCTaGAGAGAGCCCTCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: NKIQQGPKLTVRPLMFIWQKDYP*REPSHI Trigger: AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTG...CCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGTATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTTGTAGGCAGCAACTATaGGTAGTAACAGTACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: TVNQDNQKDYPCREPSHICRQQL*VVTVPQ Trigger: TTGTGGTACTGTTACTACTCATAGTTGCTGCCTACA...AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTCCACCATGTCAAAAATaGCAGAAGTCCTCGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TVNQDNQKDYPCREPSHIPPCQK*QKSSKK Trigger: CTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGG...AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTCAGAAGGATTACCCCTaGAGAGAGCCCTCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: LGGIHFKRIFLLLSSNSTQKDYP*REPSHI Trigger: AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTG...AGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTCTCAAGTCTAACAGACTGTTaGAGGTTTGCAACTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KIIRRITPAESPLTLVLSSLTDC*RFATVN Trigger: GTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACT...TGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTAAGTCTAACAGACTGTTaGAGGTTTGCAACTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ARPKTNSETADVHMANHLSLTDC*RFATVN Trigger: GTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACT...TAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTAAAAGCAGTCAGTAACTaGAGTCCTAGAAGAAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ARPKTNSETADVHMANHLKAVSN*SPRRSL Trigger: TAGACTTCTTCTAGGACTCCAGTTACTGACTGCTTT...TAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTAGAAGCAGAGTCATATaGAGCAGCATTACCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGGIHFKRIFLLLSSNSTRSRVI*SSITRG Trigger: ACCTCTGGTAATGCTGCTTCATATGACTCTGCTTCT...AGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATCGTAGTCAGCAGGATTaGAAAGTAATTCTCAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: TARPKTNSETADVHMANHRSQQD*KVILKF Trigger: AAATTTGAGAATTACTTTGCAATCCTGCTGACTACG...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAACTTTCAAGCTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCGAGATTATTATCCACTaGCAAGGGAAAGGCGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KRTFKLGGIHFKRIFLLLEIIIH*QGKGGF Trigger: GAAGCCGCCTTTCCCTTGCCAGTGGATAATAATCTC...GAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAGCTTGAAAGTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAACTTTCAAGCTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCAGTACCACAACACCATaGAAAGCAGTCAGTAACTGG | + |
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Preference number: 2 (lower is better) Translates to: KRTFKLGGIHFKRIFLLLSTTTP*KAVSNW Trigger: CCAGTTACTGACTGCTTTTCATGGTGTTGTGGTACT...GAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAGCTTGAAAGTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTTTGGATATCCGTTTTTaGCTGAAATTCATGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LGGIHFKRIFLLLSSNSTLDIRF*LKFMPL Trigger: CAGTGGCATGAATTTCAGTCAAAAACGGATATCCAA...AGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| 3UTR-3UTR TCA 90 bp | CGTTCTATTTGCATTCTTCTTTTGTCAATCCTTCAAGGGCACAGATATTTGAATTGTAGGCAGCAACTATaGGTAGTAACAGTACCACAA | + |
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Preference number: 2 (lower is better) Translates to: RSICILLLSILQGHRYLNCRQQL*VVTVPQ Trigger: TTGTGGTACTGTTACTACTCATAGTTGCTGCCTACA...ATTCAAATATCTGTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAATAGAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAACTTTCAAGCTGGGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCAAAGCAGTCAGTAACTaGAGTCCTAGAAGAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KRTFKLGGIHFKRIFLLLKAVSN*SPRRSL Trigger: TAGACTTCTTCTAGGACTCCAGTTACTGACTGCTTT...GAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAGCTTGAAAGTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTCTATTTGCATTCTTCTTTTGTCAATCCTTCAAGGGCACAGATATTTGAATCGTAGTCAGCAGGATTaGAAAGTAATTCTCAAATTT | + |
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Preference number: 2 (lower is better) Translates to: RSICILLLSILQGHRYLNRSQQD*KVILKF Trigger: AAATTTGAGAATTACTTTGCAATCCTGCTGACTACG...ATTCAAATATCTGTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAATAGAACG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR GCA 72 bp | GCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTaGAGAGAGCCCTCTCACATTAGTTCTCTCAATGAG | + |
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Preference number: 3 (lower is better) Translates to: ATVNQDNQKDYP*REPSHISSLNE Trigger: CTCATTGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATCAAGGGCACAGATATTaGAATTTAAAGTGTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: TARPKTNSETADVHMANHQGHRY*NLKCDL Trigger: CAAGTCACACTTTAAATTCAAATATCTGTGCCCTTG...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTAATTTGCATTCTTCTTTaGTCAATCCTTCAAGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ARPKTNSETADVHMANHLICILL*SILQGH Trigger: GTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAAT...TAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTATTTGCATTCTTCTTTaGTCAATCCTTCAAGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TVNQDNQKDYPCREPSHIICILL*SILQGH Trigger: GTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAAT...AATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | AACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTAAGTCTAACAGACTGTaGGAGGTTTGCAACTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: NQDNQKDYPCREPSHISSKSNRL*EVCNCK Trigger: TTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTT...AGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGACAAGGGCACAGATATTaGAATTTAAAGTGTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: CWRFATVNQDNQKDYPCRQGHRY*NLKCDL Trigger: CAAGTCACACTTTAAATTCAAATATCTGTGCCCTTG...TCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGCAAGGGCACAGATATTaGAATTTAAAGTGTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: RRSLTDCWRFATVNQDNQQGHRY*NLKCDL Trigger: CAAGTCACACTTTAAATTCAAATATCTGTGCCCTTG...CTGATTATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | AGAGTCAGAAAGGGAGTGGATCTGGGTGTGAGAGGAGGTGAGCAGAAAGAGGAGCCACCATGTCAAAAATaGCAGAAGTCCTCGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RVRKGVDLGVRGGEQKEEPPCQK*QKSSKK Trigger: CTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGG...CTCCTCTTTCTGCTCACCTCCTCTCACACCCAGATCCACTCCCTTTCTGACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057495.10 |
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| CDS-3UTR GCA 90 bp | AAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTCTCAAGAGGTGCCACATACTaGAGGGCAATGACACACAGG | + |
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Preference number: 4 (lower is better) Translates to: KIIRRITPAESPLTLVLSRGATY*RAMTHR Trigger: CCTGTGTGTCATTGCCCTGCAGTATGTGGCACCTCT...TGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATGGGAAAGGCGGCTTCTaGATAAATTCCCCAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: TARPKTNSETADVHMANHGKGGF*INSPGM Trigger: CATTCCTGGGGAATTTATCCAGAAGCCGCCTTTCCC...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | ACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTCAGAAGCAGAGTCATATaGAGCAGCATTACCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: TKIIRRITPAESPLTLVLRSRVI*SSITRG Trigger: ACCTCTGGTAATGCTGCTTCATATGACTCTGCTTCT...GAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | AACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTTTTGAAACAGGGCCCTaGGATTCTAAACCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: NQDNQKDYPCREPSHISSFETGP*DSKPCF Trigger: AAAGCAGGGTTTAGAATCTCAGGGCCCTGTTTCAAA...AGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | AAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTCTCATTTGAAACAGGGCCCTaGGATTCTAAACCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KIIRRITPAESPLTLVLSFETGP*DSKPCF Trigger: AAAGCAGGGTTTAGAATCTCAGGGCCCTGTTTCAAA...TGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | AAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTCACATTAGTTCTCTCACATACTGCAGGGCAATaGCACACAGGTAGTAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KIIRRITPAESPLTLVLSHTAGQ*HTGSKR Trigger: TCTTTTACTACCTGTGTGTCATTGCCCTGCAGTATG...TGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR CCA 90 bp | AGTCCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATGGGAAAGGCGGCTTCTaGATAAATTCCCCAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: SPRRSLTDCWRFATVNQDGKGGF*INSPGM Trigger: CATTCCTGGGGAATTTATCCAGAAGCCGCCTTTCCC...ATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTTGAAAGTAAGTTTTaGAACAGGGCCCTGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: TARPKTNSETADVHMANHFESKF*NRALRF Trigger: GAATCTCAGGGCCCTGTTTCAAAACTTACTTTCAAA...ATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGACATACTGCAGGGCAATaGCACACAGGTAGTAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: CWRFATVNQDNQKDYPCRHTAGQ*HTGSKR Trigger: TCTTTTACTACCTGTGTGTCATTGCCCTGCAGTATG...TCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCCTGTTCTTTTCTAATGAGAGTCAGAAAGGGAGTGGATCTGGGTGTGAGTTACTTTTTCCTTTCTaGTGCTTCCCTGCAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: RSLFFSNESQKGSGSGCELLFPF*CFPARI Trigger: AATCCTTGCAGGGAAGCAGCAGAAAGGAAAAAGTAA...CTCACACCCAGATCCACTCCCTTTCTGACTCTCATTAGAAAAGAACAGGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057495.10 |
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| CDS-3UTR CCA 90 bp | AGTCCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATGAGATTATTATCCACTaGCAAGGGAAAGGCGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SPRRSLTDCWRFATVNQDEIIIH*QGKGGF Trigger: GAAGCCGCCTTTCCCTTGCCAGTGGATAATAATCTC...ATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | AGTCCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATAGAAGCAGAGTCATATaGAGCAGCATTACCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SPRRSLTDCWRFATVNQDRSRVI*SSITRG Trigger: ACCTCTGGTAATGCTGCTTCATATGACTCTGCTTCT...ATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGACCACCATGTCAAAAATaGCAGAAGTCCTCGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: CWRFATVNQDNQKDYPCRPPCQK*QKSSKK Trigger: CTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGG...TCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR GCA 90 bp | TTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTTTACTTTTTCCTTTCTaGTGCTTCCCTGCAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: FATVNQDNQKDYPCREPSLLFPF*CFPARI Trigger: AATCCTTGCAGGGAAGCAGCAGAAAGGAAAAAGTAA...AGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCCCAAAACTAACAGTGAGACCGCTGATGTTCATATGGCCAATCATTTATTACTTTTTCCTTTCTaGTGCTTCCCTGCAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: ARPKTNSETADVHMANHLLLFPF*CFPARI Trigger: AATCCTTGCAGGGAAGCAGCAGAAAGGAAAAAGTAA...TAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGACTTGGTTTCTAGATaGAGGTCAATGTCTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: CWRFATVNQDNQKDYPCRDLVSR*RSMSFG Trigger: TCCAAAAGACATTGACCTTCATCTAGAAACCAAGTC...TCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGATTTGAAAGTAAGTTTTaGAACAGGGCCCTGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: CWRFATVNQDNQKDYPCRFESKF*NRALRF Trigger: GAATCTCAGGGCCCTGTTTCAAAACTTACTTTCAAA...TCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | GGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTTGTTTTGAAACAGGGCCCTaGGATTCTAAACCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GGIHFKRIFLLLSSNSTCFETGP*DSKPCF Trigger: AAAGCAGGGTTTAGAATCTCAGGGCCCTGTTTCAAA...ACAAGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | CCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATAATTTTGAAAGTAAGTTTTaGAACAGGGCCCCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PRRSLTDCWRFATVNQDNFESKF*NRAPVS Trigger: TGAAACAGGGGCCCTGTTTCAAAACTTACTTTCAAA...ATTATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223862.2 |
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| CDS-3UTR TCA 90 bp | GGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTTGTTTTGAAAGTAAGTTTTaGAACAGGGCCCTGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: GGIHFKRIFLLLSSNSTCFESKF*NRALRF Trigger: GAATCTCAGGGCCCTGTTTCAAAACTTACTTTCAAA...ACAAGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000225069.2 |
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| CDS-3UTR TCA 90 bp | CGTTCTATTTGCATTCTTCTTTTGTCAATCCTTCAAGGGCACAGATATTTGAATGACTTGGTTTCTAGATaGAGGTCAATGTCTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSICILLLSILQGHRYLNDLVSR*RSMSFG Trigger: TCCAAAAGACATTGACCTTCATCTAGAAACCAAGTC...ATTCAAATATCTGTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAATAGAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR CAA 90 bp | GTGGCTTCTGTCATTAGAGGGACACTCTCTCTACCCAACGGTGGGTTCATGATATTCTTCGGAAGGATGTaGATACCATCTCAAACTGCC | + |
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Preference number: 5 (lower is better) Translates to: VASVIRGTLSLPNGGFMIFFGRM*IPSQTA Trigger: GGCAGTTTGAGATGGTATCAACATCCTTCCGAAGAA...TATCATGAACCCACCGTTGGGTAGAGAGAGTGTCCCTCTAATGACAGAAGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR CAA 90 bp | GACTGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCTTCTTCGGAAGGATGTaGATACCATCTCAAACTGCC | + |
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Preference number: 5 (lower is better) Translates to: DCWRFATVNQDNQKDYPCFFGRM*IPSQTA Trigger: GGCAGTTTGAGATGGTATCAACATCCTTCCGAAGAA...GCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATTTCTTCGGAAGGATGTaGATACCATCTCAAACTGCC | + |
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Preference number: 5 (lower is better) Translates to: SPRRSLTDCWRFATVNQDFFGRM*IPSQTA Trigger: GGCAGTTTGAGATGGTATCAACATCCTTCCGAAGAA...ATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR CAA 90 bp | TTTGCAACTGTAAACCAAGATAATCAGAAGGATTACCCCTGCAGAGAGCCCTCTGAAGGTCAATGTCTTTaGGAATGGTTAGTGGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: FATVNQDNQKDYPCREPSEGQCL*EWLVAY Trigger: ATAAGCCACTAACCATTCCAAAAGACATTGACCTTC...AGAGGGCTCTCTGCAGGGGTAATCCTTCTGATTATCTTGGTTTACAGTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTAGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATCAGGGCCACTGTGATTaGTGTAACAGTTACCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SPRRSLTDCWRFATVNQDQGHCD*CNSYLH Trigger: ATGAAGGTAACTGTTACACAAATCACAGTGGCCCTG...ATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAAGTCTAACAGACTGTTGGAGGTTTGCAACTGTAAACCAAGATAATCAGCAGGGCCACTGTGATTaGTGTAACAGTTACCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: RRSLTDCWRFATVNQDNQQGHCD*CNSYLH Trigger: ATGAAGGTAACTGTTACACAAATCACAGTGGCCCTG...CTGATTATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057495.10 ENSMUST00000225069.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCATTCACTTTAAAAGAATATTCCTGCTACTCTCAAGTAACAGTACTTGTGAAGGTCAATGTCTTTaGGAATGGTTAGTGGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: GGIHFKRIFLLLSSNSTCEGQCL*EWLVAY Trigger: ATAAGCCACTAACCATTCCAAAAGACATTGACCTTC...ACAAGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057495.10 ENSMUST00000223827.2 ENSMUST00000223862.2 |
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