RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM160 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019158

Ensembl transcript IDs: ENSMUST00000019302.10, ENSMUST00000209536.2

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACTGGCCCATGTAGAGACCTACTGCACAAGCCCAGAGCAGACTaGCAGCCAACACTGCCCCCACACCAGCGGCAGCACCAGCAAGCG +
Preference number: 1 (lower is better)
Translates to: PTGPCRDLLHKPRAD*QPTLPPHQRQHQQA
Trigger: CGCTTGCTGGTGCTGCCGCTGGTGTGGGGGCAGTGTTGGCTGCCAGTCTGCTCTGGGCTTGTGCAGTAGGTCTCTACATGGGCCAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CCA 90 bp CCACAGCCCTGTTGTTTACTCAGGGGGTGGCCTGCCCGCTTCATCTaGGCCTTCTGTACTGGCTGCCCCATCATCCTCAGGCACCAGTTC +
Preference number: 1 (lower is better)
Translates to: PQPCCLLRGWPARFI*AFCTGCPIILRHQF
Trigger: GAACTGGTGCCTGAGGATGATGGGGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTGAGTAAACAACAGGGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR GCA 90 bp CACCAGTTCCACGTCCAGTTCCAACTGGCCCATGTAGAGACCTACTaGACAAGCCCAGAGCAGACTGGCAGCCAACACTGCCCCCACACC +
Preference number: 1 (lower is better)
Translates to: HQFHVQFQLAHVETY*TSPEQTGSQHCPHT
Trigger: GGTGTGGGGGCAGTGTTGGCTGCCAGTCTGCTCTGGGCTTGTGCAGTAGGTCTCTACATGGGCCAGTTGGAACTGGACGTGGAACTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CAA 90 bp AGCCAACACTGCCCCCACACCAGCGGCAGCACCAGCAAGCGACAGTaGCATGGGTCCCCGCAGCGCTGCCAGACCCACCGCATAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SQHCPHTSGSTSKRQ*HGSPQRCQTHRIGG
Trigger: GCCTCCTATGCGGTGGGTCTGGCAGCGCTGCGGGGACCCATGCAACTGTCGCTTGCTGGTGCTGCCGCTGGTGTGGGGGCAGTGTTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR-3UTR GCA 90 bp GTTTACTCAGGGGGTGGCCTGCCCGCTTCATCTGGGCCTTCTGTACTGGCTGCCACTGGCAGCCAACACTaGCCCCACACCAGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: VYSGGGLPASSGPSVLAATGSQH*PHTSGS
Trigger: GCTGCCGCTGGTGTGGGGGCAGTGTTGGCTGCCAGT...GGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTGAGTAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR-3UTR CCA 90 bp CAGGGGGTGGCCTGCCCGCTTCATCTGGGCCTTCTGTACTGGCTGCCCCATCATCAAGCGACAGTTGCATaGGTCCCCGCAGCGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QGVACPLHLGLLYWLPHHQATVA*VPAALP
Trigger: TGGCAGCGCTGCGGGGACCCATGCAACTGTCGCTTG...ATGATGGGGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR-3UTR TCA 90 bp CAGGGGGTGGCCTGCCCGCTTCATCTGGGCCTTCTGTACTGGCTGCCCCATCATGACCCCAATGCCGGATaGCAGAAGTCCATTTCGGAA +
Preference number: 2 (lower is better)
Translates to: QGVACPLHLGLLYWLPHHDPNAG*QKSISE
Trigger: TTCCGAAATGGACTTCTGTCATCCGGCATTGGGGTC...ATGATGGGGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR-3UTR CCA 90 bp GTTCCACGTCCAGTTCCAACTGGCCCATGTAGAGACCTACTGCACAAGCCCAGAAAAGCTGCGGGGAGTTaGGGGATGGAGCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: VPRPVPTGPCRDLLHKPRKAAGS*GMELCI
Trigger: GATGCAGAGCTCCATCCCCCAACTCCCCGCAGCTTT...TCTGGGCTTGTGCAGTAGGTCTCTACATGGGCCAGTTGGAACTGGACGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR GCA 72 bp GCCCCCACACCAGCGGCAGCACCAGCAAGCGACAGTTaGATGGGTCCCCGCAGCGCTGCCAGACCCACCGCA +
Preference number: 3 (lower is better)
Translates to: APTPAAAPASDS*MGPRSAARPTA
Trigger: TGCGGTGGGTCTGGCAGCGCTGCGGGGACCCATGCAACTGTCGCTTGCTGGTGCTGCCGCTGGTGTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR-3UTR CAA 90 bp CTACTGCACAAGCCCAGAGCAGACTGGCAGCCAACACTGCCCCCACACCAGCGGACCAGCAAGCGACAGTaGCATGGGTCCCCGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LLHKPRADWQPTLPPHQRTSKRQ*HGSPQR
Trigger: GCGCTGCGGGGACCCATGCAACTGTCGCTTGCTGGT...CCGCTGGTGTGGGGGCAGTGTTGGCTGCCAGTCTGCTCTGGGCTTGTGCAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR GCA 72 bp GTCCCCACAGCCCTGTTGTTTACTCAGGGGGTGGCCTaGCCGCTTCATCTGGGCCTTCTGTACTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: VPTALLFTQGVA*PLHLGLLYWLP
Trigger: GGGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTGAGTAAACAACAGGGCTGTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CCA 72 bp GGGGTGGCCTGCCCGCTTCATCTGGGCCTTCTGTACTaGCTGCCCCATCATCCTCAGGCACCAGTTCCACGT +
Preference number: 3 (lower is better)
Translates to: GVACPLHLGLLY*LPHHPQAPVPR
Trigger: ACGTGGAACTGGTGCCTGAGGATGATGGGGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CCA 72 bp AGCCAGTCCCCACAGCCCTGTTGTTTACTCAGGGGGTaGCCTGCCCGCTTCATCTGGGCCTTCTGTACTGGC +
Preference number: 3 (lower is better)
Translates to: SQSPQPCCLLRG*PARFIWAFCTG
Trigger: GCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTGAGTAAACAACAGGGCTGTGGGGACTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR GCA 72 bp CACGTCCAGTTCCAACTGGCCCATGTAGAGACCTACTaGACAAGCCCAGAGCAGACTGGCAGCCAACACTGC +
Preference number: 3 (lower is better)
Translates to: HVQFQLAHVETY*TSPEQTGSQHC
Trigger: GCAGTGTTGGCTGCCAGTCTGCTCTGGGCTTGTGCAGTAGGTCTCTACATGGGCCAGTTGGAACTGGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CAA 72 bp TGCCCCCACACCAGCGGCAGCACCAGCAAGCGACAGTaGCATGGGTCCCCGCAGCGCTGCCAGACCCACCGC +
Preference number: 4 (lower is better)
Translates to: CPHTSGSTSKRQ*HGSPQRCQTHR
Trigger: GCGGTGGGTCTGGCAGCGCTGCGGGGACCCATGCAACTGTCGCTTGCTGGTGCTGCCGCTGGTGTGGGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
3UTR CAA 72 bp CCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTaGTTTACTCAGGGGGTGGCCTGCCCGCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSRQAQPVPTAL*FTQGVACPLHL
Trigger: CAGATGAAGCGGGCAGGCCACCCCCTGAGTAAACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
CDS-3UTR GCA 90 bp GTTTACTCAGGGGGTGGCCTGCCCGCTTCATCTGGGCCTTCTGTACTGGCTGCCCTGTCTCATGTGCCTTaGGGAGGAGCCAAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: VYSGGGLPASSGPSVLAALSHVP*GGAKRP
Trigger: CGGACGCTTGGCTCCTCCGCAAGGCACATGAGACAG...GGCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGGCCACCCCCTGAGTAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
CDS-3UTR GCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTACTGGCAGCCAACACTaGCCCCACACCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCTGSQH*PHTSGS
Trigger: GCTGCCGCTGGTGTGGGGGCAGTGTTGGCTGCCAGT...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR CCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTCAAGCGACAGTTGCATaGGTCCCCGCAGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCQATVA*VPAALP
Trigger: TGGCAGCGCTGCGGGGACCCATGCAACTGTCGCTTG...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR GCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTCTGTCTCATGTGCCTTaGGGAGGAGCCAAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCLSHVP*GGAKRP
Trigger: CGGACGCTTGGCTCCTCCGCAAGGCACATGAGACAG...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000019302.10
ENSMUST00000209536.2
CDS-3UTR CCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTAAGCCCAGAGCAGACTaGCAGCCAACACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCKPRAD*QPTLPP
Trigger: TGGGGGCAGTGTTGGCTGCCAGTCTGCTCTGGGCTT...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR CCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTCCTGCCCGCTTCATCTaGGCCTTCTGTACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCPARFI*AFCTGC
Trigger: GCAGCCAGTACAGAAGGCCCAGATGAAGCGGGCAGG...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR TCA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTGACCCCAATGCCGGATaGCAGAAGTCCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCDPNAG*QKSISE
Trigger: TTCCGAAATGGACTTCTGTCATCCGGCATTGGGGTC...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR CAA 90 bp ACCTACTGCACAAGCCCAGAGCAGACTGGCAGCCAACACTGCCCCCACACCAGCCCTGTCTCATGTGCCTaGCGGAGGAGCCAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: TYCTSPEQTGSQHCPHTSPVSCA*RRSQAS
Trigger: GGACGCTTGGCTCCTCCGCAAGGCACATGAGACAGG...GCTGGTGTGGGGGCAGTGTTGGCTGCCAGTCTGCTCTGGGCTTGTGCAGTAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209536.2
CDS-3UTR CAA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTACCAGCAAGCGACAGTaGCATGGGTCCCCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCTSKRQ*HGSPQR
Trigger: GCGCTGCGGGGACCCATGCAACTGTCGCTTGCTGGT...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10
CDS-3UTR CAA 90 bp TCAGGTTTTAATGTCCCAGTCGTCAGGCCCAGCCAGTCCCCACAGCCCTGTTGTGCTGTCTCATGTGCCTaGCGGAGGAGCCAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: SGFNVPVVRPSQSPQPCCAVSCA*RRSQAS
Trigger: GGACGCTTGGCTCCTCCGCAAGGCACATGAGACAGC...ACAACAGGGCTGTGGGGACTGGCTGGGCCTGACGACTGGGACATTAAAACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019302.10