Pregenerated sensors for TMEM159 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030917Ensembl transcript IDs: ENSMUST00000033210.13, ENSMUST00000118737.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTATTTCAAATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCTaGCCCCAGACTGCAACTAAACTTCAAATACAATCTATCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: LFQMTGENPSSSSLP*PQTATKLQIQSILA Trigger: GGCTAAGATAGATTGTATTTGAAGTTTAGTTGCAGTCTGGGGGCAGGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR CCA 90 bp | TCTGGTTTGCTTTGTAGTCTTTCTTCAGTATGTGTTCGGTTTTATTaGTTTGTTAAGAAATGGCTTGGCAGAAACAAGCTCTTTAAACAA | + |
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Preference number: 1 (lower is better) Translates to: SGLLCSLSSVCVRFY*FVKKWLGRNKLFKQ Trigger: TTGTTTAAAGAGCTTGTTTCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAGACTACAAAGCAAACCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCACTGCAGGAGTCTGGACACAGTGAGCAGAGAAGCAGGGCTCCCATCCAGCTTAGGAAGCCATCTTTaGTTCCATTTGGCCCGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GHCRSLDTVSREAGLPSSLGSHL*FHLARH Trigger: ATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAA...GCTGGATGGGAGCCCTGCTTCTCTGCTCACTGTGTCCAGACTCCTGCAGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR TCA 90 bp | TATCTTAGCCGCAGATGGGCTCTGGGACTCAACCTCAAGGCTCTAAAGGCCAAGTGCAGTCCTGAGAGGTaGGGGGACAAGCTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YLSRRWALGLNLKALKAKCSPER*GDKLSS Trigger: AGAGGAGAGCTTGTCCCCTCACCTCTCAGGACTGCA...CTTGGCCTTTAGAGCCTTGAGGTTGAGTCCCAGAGCCCATCTGCGGCTAAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR GCA 90 bp | TATCTTAGCCGCAGATGGGCTCTGGGACTCAACCTCAAGGCTCTAAAGGCCAAGATCCAGCCCTCTCTCTaGCCTGCAGTCCTGAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: YLSRRWALGLNLKALKAKIQPSL*PAVLRG Trigger: ACCTCTCAGGACTGCAGGGCAGAGAGAGGGCTGGAT...CTTGGCCTTTAGAGCCTTGAGGTTGAGTCCCAGAGCCCATCTGCGGCTAAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGTTAAGACAGATTTTCCGTCCTCTTCATCCCTaGCCTGCCCCCAGACTGCAA | + |
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Preference number: 2 (lower is better) Translates to: GLEMFPKGLLAAGLRQIFRPLHP*PAPRLQ Trigger: TTGCAGTCTGGGGGCAGGGCAGGGATGAAGAGGACG...GAAAATCTGTCTTAACCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CCA 90 bp | TTTAACCTCTTATTTCAAATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCGTGGGGAGGCCACGCTaGCCACTGCAGGAGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FNLLFQMTGENPSSSSLPVGRPR*PLQESG Trigger: TCCAGACTCCTGCAGTGGCCAGCGTGGCCTCCCCAC...GGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAAGAGGTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAGTGGGGAGGCCACGCTaGCCACTGCAGGAGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRVGRPR*PLQESG Trigger: TCCAGACTCCTGCAGTGGCCAGCGTGGCCTCCCCAC...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGTTAAGACAGATTTTCTTAGGAAGCCATCTTTaGTTCCATTTGGCCCGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GLEMFPKGLLAAGLRQIFLGSHL*FHLARH Trigger: ATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAA...GAAAATCTGTCTTAACCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAGGAGTCTGGACACAGTaGGCAGAGAAGCAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRGVWTQ*AEKQGS Trigger: GGAGCCCTGCTTCTCTGCTCACTGTGTCCAGACTCC...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAGCCGCAGATGGGCTCTaGGACTCAACCTCAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRAADGL*DSTSRL Trigger: GAGCCTTGAGGTTGAGTCCCAGAGCCCATCTGCGGC...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CCA 90 bp | GCATGCAATAGACTAGGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGCTTATTTCAAATGACTaGAGAAAACCCGTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ACNRLGLEMFPKGLLAAGLISND*RKPVLF Trigger: GAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAAG...CCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCCTAGTCTATTGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR CCA 72 bp | GCAGCCCACCACTCTGCTAAGGTCAAGGCTGCATACTaGGGAGCCGTGAGGGGTGGGGAGGCCACGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: AAHHSAKVKAAY*GAVRGGEATLA Trigger: GGCCAGCGTGGCCTCCCCACCCCTCACGGCTCCCCAGTATGCAGCCTTGACCTTAGCAGAGTGGTGGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR TCA 72 bp | GACAAGCTCTCCTCTGGGTGCTTAGGAAGCCATCTTTaGTTCCATTTGGCCCGTCATTCCCGGTCATGCCTC | + |
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Preference number: 3 (lower is better) Translates to: DKLSSGCLGSHL*FHLARHSRSCL Trigger: GAGGCATGACCGGGAATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAGCACCCAGAGGAGAGCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CAA 90 bp | GCATGCAATAGACTAGGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGCTTAGGAAGCCATCTTaGATTCCATTTGGCCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: ACNRLGLEMFPKGLLAAGLRKPS*IPFGPS Trigger: TGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAG...CCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCCTAGTCTATTGCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR GCA 72 bp | ATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCTaGCCCCAGACTGCAACTAAACTTCAAATACAATCT | + |
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Preference number: 3 (lower is better) Translates to: MTGENPSSSSLP*PQTATKLQIQS Trigger: AGATTGTATTTGAAGTTTAGTTGCAGTCTGGGGGCAGGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAACCTCTTATTTCAAATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCCTTAGGAAGCCATCTTaGATTCCATTTGGCCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: FNLLFQMTGENPSSSSLPLRKPS*IPFGPS Trigger: TGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAG...GGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAAGAGGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR GCA 72 bp | GTAAATGAAGTGGAAATCATCGCACAGGCTCTGGTTTaGTTTGTAGTCTTTCTTCAGTATGTGTTCGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VNEVEIIAQALV*FVVFLQYVFGF Trigger: AAAACCGAACACATACTGAAGAAAGACTACAAAGCAAACCAGAGCCTGTGCGATGATTTCCACTTCATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR CCA 72 bp | CTTTGTAGTCTTTCTTCAGTATGTGTTCGGTTTTATTaGTTTGTTAAGAAATGGCTTGGCAGAAACAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LCSLSSVCVRFY*FVKKWLGRNKL Trigger: GAGCTTGTTTCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAGACTACAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CCA 90 bp | GGCCACTGCAGGAGTCTGGACACAGTGAGCAGAGAAGCAGGGCTCCCATCCAGCGCTCCTGTAAGTCTCTaGAGACACTCGGGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GHCRSLDTVSREAGLPSSAPVSL*RHSGAL Trigger: AAGAGCCCCCGAGTGTCTCCAGAGACTTACAGGAGC...GCTGGATGGGAGCCCTGCTTCTCTGCTCACTGTGTCCAGACTCCTGCAGTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CCA 90 bp | GGCCACTGCAGGAGTCTGGACACAGTGAGCAGAGAAGCAGGGCTCCCATCCAGCGCTGACAGTCGACGTTaGCATTTTGCTGTGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GHCRSLDTVSREAGLPSSADSRR*HFAVSV Trigger: CACTGACACAGCAAAATGCCAACGTCGACTGTCAGC...GCTGGATGGGAGCCCTGCTTCTCTGCTCACTGTGTCCAGACTCCTGCAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR GCA 90 bp | GCTCTCCTCTGGGTGCTTAGGAAGCCATCTTTGATTCCATTTGGCCCGTCATTCGCTGTGTCAGTGGCCTaGTGGGAGAAAACCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ALLWVLRKPSLIPFGPSFAVSVA*WEKTSS Trigger: GCTACTGGTTTTCTCCCAGCAGGCCACTGACACAGC...GAATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAGCACCCAGAGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CCA 90 bp | TATCTTAGCCGCAGATGGGCTCTGGGACTCAACCTCAAGGCTCTAAAGGCCAAGGTGTCAGTGGCCTGCTaGGAGAAAACCAGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YLSRRWALGLNLKALKAKVSVAC*EKTSSS Trigger: TGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACAC...CTTGGCCTTTAGAGCCTTGAGGTTGAGTCCCAGAGCCCATCTGCGGCTAAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR TCA 90 bp | GCTCTCCTCTGGGTGCTTAGGAAGCCATCTTTGATTCCATTTGGCCCGTCATTCGCCAACAGGGATGGCTaGCATGGTAACAAACATCAG | + |
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Preference number: 4 (lower is better) Translates to: ALLWVLRKPSLIPFGPSFANRDG*HGNKHQ Trigger: CTGATGTTTGTTACCATGTCAGCCATCCCTGTTGGC...GAATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAGCACCCAGAGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR TCA 90 bp | GGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGTTAAGACAGATTTTCGCCAACAGGGATGGCTaGCATGGTAACAAACATCAG | + |
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Preference number: 4 (lower is better) Translates to: GLEMFPKGLLAAGLRQIFANRDG*HGNKHQ Trigger: CTGATGTTTGTTACCATGTCAGCCATCCCTGTTGGC...GAAAATCTGTCTTAACCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR GCA 90 bp | TTTAACCTCTTATTTCAAATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCGCTGTGTCAGTGGCCTaGTGGGAGAAAACCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FNLLFQMTGENPSSSSLPAVSVA*WEKTSS Trigger: GCTACTGGTTTTCTCCCAGCAGGCCACTGACACAGC...GGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAAGAGGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR TCA 90 bp | GCTCTCCTCTGGGTGCTTAGGAAGCCATCTTTGATTCCATTTGGCCCGTCATTCAAAGGCAACCACCTTTaGGTTATTCAGGAAAGACTC | + |
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Preference number: 4 (lower is better) Translates to: ALLWVLRKPSLIPFGPSFKGNHL*VIQERL Trigger: GAGTCTTTCCTGAATAACTCAAAGGTGGTTGCCTTT...GAATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAGCACCCAGAGGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR TCA 90 bp | GGCCTTGAGATGTTTCCTAAAGGACTCCTGGCTGCAGGGTTAAGACAGATTTTCCAAACATCAGCACGGTaGGAGTCACAAAAGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: GLEMFPKGLLAAGLRQIFQTSAR*ESQKDV Trigger: GACATCCTTTTGTGACTCTCACCGTGCTGATGTTTG...GAAAATCTGTCTTAACCCTGCAGCCAGGAGTCCTTTAGGAAACATCTCAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR TCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGACCCCGACAAGGCAAGTaGCAGGAAGCCCAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRPRQGK*QEAQAT Trigger: TGTGGCCTGGGCTTCCTGTCACTTGCCTTGTCGGGG...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR GCA 90 bp | TTTAACCTCTTATTTCAAATGACTGGAGAAAACCCGTCCTCTTCATCCCTGCCCAAACCCAGCTTCCTTTaGAGCTCCTGTAAGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FNLLFQMTGENPSSSSLPKPSFL*SSCKSL Trigger: CAGAGACTTACAGGAGCTGCAAAGGAAGCTGGGTTT...GGGCAGGGATGAAGAGGACGGGTTTTCTCCAGTCATTTGAAATAAGAGGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAGCTCCTGTAAGTCTCTaGAGACACTCGGGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRAPVSL*RHSGAL Trigger: AAGAGCCCCCGAGTGTCTCCAGAGACTTACAGGAGC...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR GCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGATCGACGTTGGCATTTTaGTGTGTCAGTGGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRSTLAF*CVSGLL Trigger: CAGCAGGCCACTGACACAGCAAAATGCCAACGTCGA...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAGTGTCAGTGGCCTGCTaGGAGAAAACCAGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRVSVAC*EKTSSS Trigger: TGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACAC...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR GCA 90 bp | CTTTCTTCAGTATGTGTTCGGTTTTATTGGTTTGTTAAGAAATGGCTTGGCAGAAAACCCAGCTTCCTTTaGAGCTCCTGTAAGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSVCVRFYWFVKKWLGRKPSFL*SSCKSL Trigger: CAGAGACTTACAGGAGCTGCAAAGGAAGCTGGGTTT...TCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| 3UTR CAA 72 bp | GTAGTCTTTCTTCAGTATGTGTTCGGTTTTATTGGTTaGTTAAGAAATGGCTTGGCAGAAACAAGCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VVFLQYVFGFIG*LRNGLAETSSL Trigger: TAAAGAGCTTGTTTCTGCCAAGCCATTTCTTAACAAACCAATAAAACCGAACACATACTGAAGAAAGACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CAA 90 bp | GGCCACTGCAGGAGTCTGGACACAGTGAGCAGAGAAGCAGGGCTCCCATCCAGCGTCGACGTTGGCATTTaGCTGTGTCAGTGGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GHCRSLDTVSREAGLPSSVDVGI*LCQWPA Trigger: AGCAGGCCACTGACACAGCAAAATGCCAACGTCGAC...GCTGGATGGGAGCCCTGCTTCTCTGCTCACTGTGTCCAGACTCCTGCAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS CCA 90 bp | CTTCATAGCCAGCTGACAGTCGACGTTGGCATTTTGCTGTGTCAGTaGCCTGCTGGGAGAAAACCAGTAGCTCATGAGGCAGGAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: LHSQLTVDVGILLCQ*PAGRKPVAHEAGDH Trigger: GTGGTCTCCTGCCTCATGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACACAGCAAAATGCCAACGTCGACTGTCAGCTGGCTATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS-3UTR CAA 90 bp | GCTCTCCTCTGGGTGCTTAGGAAGCCATCTTTGATTCCATTTGGCCCGTCATTCGTCGACGTTGGCATTTaGCTGTGTCAGTGGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ALLWVLRKPSLIPFGPSFVDVGI*LCQWPA Trigger: AGCAGGCCACTGACACAGCAAAATGCCAACGTCGAC...GAATGACGGGCCAAATGGAATCAAAGATGGCTTCCTAAGCACCCAGAGGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS GCA 90 bp | TTTGAGTTATTCAGGAAAGACTCTAACAGCAAACCCAGCTTCCTTTaGAGCTCCTGTAAGTCTCTGGAGACACTCGGGGGCTCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: FELFRKDSNSKPSFL*SSCKSLETLGGSSL Trigger: CAAAGAAGAGCCCCCGAGTGTCTCCAGAGACTTACAGGAGCTGCAAAGGAAGCTGGGTTTGCTGTTAGAGTCTTTCCTGAATAACTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS TCA 72 bp | CACATAGGACATCATGGCTATCCCCGACAAGGCAAGTaGCAGGAAGCCCAGGCCACAGAGGACGCAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HIGHHGYPRQGK*QEAQATEDAEK Trigger: CTTCTCTGCGTCCTCTGTGGCCTGGGCTTCCTGTCACTTGCCTTGTCGGGGATAGCCATGATGTCCTATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS TCA 72 bp | GTGTCAGTGGCCTGCTGGGAGAAAACCAGTAGCTCATaGGGCAGGAGACCACCACATAGGACATCATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: VSVACWEKTSSS*GRRPPHRTSWL Trigger: TAGCCATGATGTCCTATGTGGTGGTCTCCTGCCTCATGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS CCA 72 bp | CAGCTGACAGTCGACGTTGGCATTTTGCTGTGTCAGTaGCCTGCTGGGAGAAAACCAGTAGCTCATGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QLTVDVGILLCQ*PAGRKPVAHEA Trigger: TGCCTCATGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACACAGCAAAATGCCAACGTCGACTGTCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS CAA 90 bp | AGACTCCGTGAACTTCATAGCCAGCTGACAGTCGACGTTGGCATTTaGCTGTGTCAGTGGCCTGCTGGGAGAAAACCAGTAGCTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: RLRELHSQLTVDVGI*LCQWPAGRKPVAHE Trigger: CTCATGAGCTACTGGTTTTCTCCCAGCAGGCCACTGACACAGCAAAATGCCAACGTCGACTGTCAGCTGGCTATGAAGTTCACGGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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| CDS CAA 72 bp | GAACTTCATAGCCAGCTGACAGTCGACGTTGGCATTTaGCTGTGTCAGTGGCCTGCTGGGAGAAAACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: ELHSQLTVDVGI*LCQWPAGRKPV Trigger: TACTGGTTTTCTCCCAGCAGGCCACTGACACAGCAAAATGCCAACGTCGACTGTCAGCTGGCTATGAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033210.13 ENSMUST00000118737.3 |
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