Pregenerated sensors for TMEM158 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054871Ensembl transcript IDs: ENSMUST00000068140.6
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCAGGGGAAAGAGCCGGTTTCCCTTGTGTCCTCGAGCCACGCGTaGATCCCACCCTTCAGCCCGAGAGCTTGCCCCTGCTCTTCCGAA | + |
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Preference number: 1 (lower is better) Translates to: PQGKEPVSLVSSSHA*IPPFSPRACPCSSE Trigger: TTCGGAAGAGCAGGGGCAAGCTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACACAAGGGAAACCGGCTCTTTCCCCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR GCA 90 bp | CCTCCCGGGAAAAGGATGAACAATAAGGACAGCACGAAGCGCACCTaGCCCGTCTCCGGTGAGGAAGGCGCGTGCGAGCGCTTACACAGC | + |
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Preference number: 1 (lower is better) Translates to: PPGKRMNNKDSTKRT*PVSGEEGACERLHS Trigger: GCTGTGTAAGCGCTCGCACGCGCCTTCCTCACCGGAGACGGGGCAGGTGCGCTTCGTGCTGTCCTTATTGTTCATCCTTTTCCCGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR GCA 90 bp | GTGTCCTCGAGCCACGCGTGGATCCCACCCTTCAGCCCGAGAGCTTaGCCCTGCTCTTCCGAACCAGAACCTCAGCACAAACCCCACTTT | + |
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Preference number: 1 (lower is better) Translates to: VSSSHAWIPPFSPRA*PCSSEPEPQHKPHF Trigger: AAAGTGGGGTTTGTGCTGAGGTTCTGGTTCGGAAGAGCAGGGGCAAGCTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR GCA 90 bp | TCACTTTCTGCCATAAATAAAGGGCATGTGGGCGCAGGGAGGGGGTaGCGCAGGGGAAAGAGCCGGTTTCCCTTGTGTCCTCGAGCCACG | + |
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Preference number: 1 (lower is better) Translates to: SLSAINKGHVGAGRG*RRGKSRFPLCPRAT Trigger: CGTGGCTCGAGGACACAAGGGAAACCGGCTCTTTCCCCTGCGGCACCCCCTCCCTGCGCCCACATGCCCTTTATTTATGGCAGAAAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR CAA 90 bp | TGTGTCCTCGAGCCACGCGTGGATCCCACCCTTCAGCCCGAGAGCTaGCCCCTGCTCTTCCGAACCAGAACCTCAGCACAAACCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: CVLEPRVDPTLQPES*PLLFRTRTSAQTPL Trigger: AAGTGGGGTTTGTGCTGAGGTTCTGGTTCGGAAGAGCAGGGGCAAGCTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR-3UTR GCA 90 bp | AAATACAACTACATTCAGATACAAAGAGCTCCTGTTACCACAGCTTTAGCAGTTGGCGCAGGGAGGGGGTaGCGCAGGGGAAAGAGCCGG | + |
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Preference number: 2 (lower is better) Translates to: KYNYIQIQRAPVTTALAVGAGRG*RRGKSR Trigger: CCGGCTCTTTCCCCTGCGGCACCCCCTCCCTGCGCC...AACTGCTAAAGCTGTGGTAACAGGAGCTCTTTGTATCTGAATGTAGTTGTATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR-3UTR GCA 90 bp | GCCATGTCACTGAATAGATCGACTTGGAAAAGATTCATAAAGTTCTTTTGTAAGTTCAGCCCGAGAGCTTaGCCCTGCTCTTCCGAACCA | + |
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Preference number: 2 (lower is better) Translates to: AMSLNRSTWKRFIKFFCKFSPRA*PCSSEP Trigger: TGGTTCGGAAGAGCAGGGGCAAGCTCTCGGGCTGAA...CTTACAAAAGAACTTTATGAATCTTTTCCAAGTCGATCTATTCAGTGACATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR CCA 72 bp | AAAGAGCCGGTTTCCCTTGTGTCCTCGAGCCACGCGTaGATCCCACCCTTCAGCCCGAGAGCTTGCCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KEPVSLVSSSHA*IPPFSPRACPC Trigger: GCAGGGGCAAGCTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACACAAGGGAAACCGGCTCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR GCA 72 bp | AAAAGGATGAACAATAAGGACAGCACGAAGCGCACCTaGCCCGTCTCCGGTGAGGAAGGCGCGTGCGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: KRMNNKDSTKRT*PVSGEEGACER Trigger: GCGCTCGCACGCGCCTTCCTCACCGGAGACGGGGCAGGTGCGCTTCGTGCTGTCCTTATTGTTCATCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| 3UTR GCA 72 bp | AGCCACGCGTGGATCCCACCCTTCAGCCCGAGAGCTTaGCCCTGCTCTTCCGAACCAGAACCTCAGCACAAA | + |
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Preference number: 3 (lower is better) Translates to: SHAWIPPFSPRA*PCSSEPEPQHK Trigger: TTTGTGCTGAGGTTCTGGTTCGGAAGAGCAGGGGCAAGCTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR GCA 90 bp | CGGTTTCCCTTGTGTCCTCGAGCCACGCGTGGATCCCACCCTTCAGCCCGAGAGAGCAGCAGGTCGCACTaGAAGCCCCGCGGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RFPLCPRATRGSHPSARESSRSH*KPRGRP Trigger: GGGCCGCCCGCGGGGCTTGCAGTGCGACCTGCTGCT...CTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACACAAGGGAAACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR TCA 90 bp | CGGTTTCCCTTGTGTCCTCGAGCCACGCGTGGATCCCACCCTTCAGCCCGAGAGTGGGCACCGGCCAGATaGGGGCGGCCACGCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: RFPLCPRATRGSHPSAREWAPAR*GRPRST Trigger: TGTGGAGCGTGGCCGCCCTCATCTGGCCGGTGCCCA...CTCTCGGGCTGAAGGGTGGGATCCACGCGTGGCTCGAGGACACAAGGGAAACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR GCA 90 bp | TCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCCGCGGTGGTCCGGCGCTaGTCCATGCCGTTGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAQTPLSHLICASLRSPPAVVRR*SMPLGR Trigger: CCTGCCCAACGGCATGGAGCAGCGCCGGACCACCGC...GGGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCCTCGATGAGCAGTGGTaGCCCGACGCGGTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSTNPTFPPHLCLSAVPSLDEQW*PDAVEG Trigger: GCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAG...GGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTGCTCTTCCGAACCAGAACCTCAGCACAAACCCCACTTTCCCACCTCATGCCGCCAGCCCCAGATaGTCGATGAGCAGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: APALPNQNLSTNPTFPPHAASPR*SMSSGG Trigger: GCCACCACTGCTCATCGAGCATCTGGGGCTGGCGGC...ATGAGGTGGGAAAGTGGGGTTTGTGCTGAGGTTCTGGTTCGGAAGAGCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR GCA 90 bp | GCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCCGGGCTCAGCATCTGTCGTTaGACGCTGATGTTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AQTPLSHLICASLRSPPGLSICR*TLMLQG Trigger: GCCCTGCAACATCAGCGTGCAACGACAGATGCTGAG...CCCGGGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR GCA 90 bp | CTTCCGAACCAGAACCTCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCCGGCGCTGCTCCATaGCGTTGGGCAGGAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LPNQNLSTNPTFPPHLCLSGAAP*RWAGSR Trigger: CCGGCTTCCTGCCCAACGGCATGGAGCAGCGCCGGA...GAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGAGGTTCTGGTTCGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR TCA 90 bp | AAATACAACTACATTCAGATACAAAGAGCTCCTGTTACCACAGCTTTAGCAGTTTCCAGGCAGCAGAAGTaGCGAGGCTCGCCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KYNYIQIQRAPVTTALAVSRQQK*RGSPCS Trigger: GCTGCAGGGCGAGCCTCGTCACTTCTGCTGCCTGGA...AACTGCTAAAGCTGTGGTAACAGGAGCTCTTTGTATCTGAATGTAGTTGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CCA 90 bp | AAATACAACTACATTCAGATACAAAGAGCTCCTGTTACCACAGCTTTAGCAGTTATGCTCGATGAGCAGTaGTGGCCCGACGCGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KYNYIQIQRAPVTTALAVMLDEQ*WPDAVE Trigger: TTCCACCGCGTCGGGCCACCACTGCTCATCGAGCAT...AACTGCTAAAGCTGTGGTAACAGGAGCTCTTTGTATCTGAATGTAGTTGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | TTTGGGGGCGTCCCTGCAAGGCCGGGCGCATCCGTGGCCCCGCCGTaGGCCGGCGGCAGCTGGCAGGCGGCGGCCAGTAGCGCGGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: FGGVPARPGASVAPP*AGGSWQAAASSAAR Trigger: TCTCGCCGCGCTACTGGCCGCCGCCTGCCAGCTGCCGCCGGCGCACGGCGGGGCCACGGATGCGCCCGGCCTTGCAGGGACGCCCCCAAA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CCA 90 bp | GATGTTGCAGGGCGCCGCCGGAGCCTCCTCTGGGCCCGCGCGCTCTaGGGGCGCCGATGCCGCCGATGCCAGCAGACGCGGGGTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: DVAGRRRSLLWARAL*GRRCRRCQQTRGGV Trigger: CACTCCACCCCGCGTCTGCTGGCATCGGCGGCATCGGCGCCCCCAGAGCGCGCGGGCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | CGGCCGCGCACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTTGCTaGGCGCCGCCCGCCGCCAGCCCCAGATGCTCGATGAGCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RPRTQPQPTHRRRSC*APPAASPRCSMSSG Trigger: ACCACTGCTCATCGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGTGCGCGGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | AGGCGGCCGCGCACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTTaGTGCGCGCCGCCCGCCGCCAGCCCCAGATGCTCGATGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RRPRTQPQPTHRRRS*CAPPAASPRCSMSS Trigger: ACTGCTCATCGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGTGCGCGGCCGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | CGCCGCCGGAGCCTCCTCTGGGCCCGCGCGCTCTGGGGGCGCCGATaGCGCCGATGCCAGCAGACGCGGGGTGGAGTGTTCGTTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: RRRSLLWARALWGRR*RRCQQTRGGVFVGE Trigger: TTCACCAACGAACACTCCACCCCGCGTCTGCTGGCATCGGCGGCATCGGCGCCCCCAGAGCGCGCGGGCCCAGAGGAGGCTCCGGCGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | TTCGTTGGTGAAGGACGCATTGGCCGAGGCGTTTGGGGGCGTCCCTaGAAGGCCGGGCGCATCCGTGGCCCCGCCGTGCGCCGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FVGEGRIGRGVWGRP*KAGRIRGPAVRRRQ Trigger: CTGCCGCCGGCGCACGGCGGGGCCACGGATGCGCCCGGCCTTGCAGGGACGCCCCCAAACGCCTCGGCCAATGCGTCCTTCACCAACGAA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | CGCGGGCGGCCCCAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTTaGACGCTGATGTTGCAGGGCGCCGCCGGAGCCTCCTCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RGRPQRTSSELSICR*TLMLQGAAGASSGP Trigger: GGGCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTGGGGCCGCCCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS TCA 90 bp | GGCCCCAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTTGCACGCTaGTGTTGCAGGGCGCCGCCGGAGCCTCCTCTGGGCCCGCGCGCT | + |
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Preference number: 5 (lower is better) Translates to: GPSARAASSASVVAR*CCRAPPEPPLGPRA Trigger: AGCGCGCGGGCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTGGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 90 bp | AAGGCGCGGCCGTGCGCGTTGGTAGAGAAGAGCAGCAGGTCGCACTaGAAGCCCCGCGGGCGGCCCCAGCGCACGAGCAGCGAGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KARPCALVEKSSRSH*KPRGRPQRTSSELS Trigger: GCTGAGCTCGCTGCTCGTGCGCTGGGGCCGCCCGCGGGGCTTGCAGTGCGACCTGCTGCTCTTCTCTACCAACGCGCACGGCCGCGCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CCA 90 bp | GCCGCCAGCCCCAGATGCTCGATGAGCAGTGGTGGCCCGACGCGGTaGAAGGCGGCGGCGAAGAAGGCGCGGCCGTGCGCGTTGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: AASPRCSMSSGGPTR*KAAAKKARPCALVE Trigger: CTCTACCAACGCGCACGGCCGCGCCTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAGCATCTGGGGCTGGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | TCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCCCGTTGCACGCTGATGTaGCAGGGCGCCGCCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SAQTPLSHLICASLRSPPRCTLM*QGAAGA Trigger: GGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACG...GGGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | CTCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCGTAGACTCGATGGGCTaGCGGTTCAGCCGCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSTNPTFPPHLCLSAVPSVDSMG*RFSRQP Trigger: GGGCTGGCGGCTGAACCGCAAGCCCATCGAGTCTAC...GGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCTCTTCCGAACCAGAACCTCAGCACAAACCCCACTTTCCCACCTCATCGCTGCTCCATGCCGTaGGGCAGGAAGCCGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: APALPNQNLSTNPTFPPHRCSMP*GRKPAM Trigger: CATTGCCGGCTTCCTGCCCAACGGCATGGAGCAGCG...ATGAGGTGGGAAAGTGGGGTTTGTGCTGAGGTTCTGGTTCGGAAGAGCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | CTCAGCACAAACCCCACTTTCCCACCTCATTTGTGCCTCTCTGCGGTCCCCTCCGGGGTGGAGTGTTCGTaGGTGAAGGACGCATTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSTNPTFPPHLCLSAVPSGVECS*VKDALA Trigger: GGCCAATGCGTCCTTCACCAACGAACACTCCACCCC...GGAGGGGACCGCAGAGAGGCACAAATGAGGTGGGAAAGTGGGGTTTGTGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | GCCATGTCACTGAATAGATCGACTTGGAAAAGATTCATAAAGTTCTTTTGTAAGGCGCGGCCGTGCGCGTaGGTAGAGAAGAGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AMSLNRSTWKRFIKFFCKARPCA*VEKSSR Trigger: CCTGCTGCTCTTCTCTACCAACGCGCACGGCCGCGC...CTTACAAAAGAACTTTATGAATCTTTTCCAAGTCGATCTATTCAGTGACATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS-3UTR CAA 90 bp | GCCATGTCACTGAATAGATCGACTTGGAAAAGATTCATAAAGTTCTTTTGTAAGGCTCAGCATCTGTCGTaGCACGCTGATGTTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AMSLNRSTWKRFIKFFCKAQHLS*HADVAG Trigger: CCCTGCAACATCAGCGTGCAACGACAGATGCTGAGC...CTTACAAAAGAACTTTATGAATCTTTTCCAAGTCGATCTATTCAGTGACATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS TCA 72 bp | GCTGCGCGCCGCCCGCCGCCAGCCCCAGATGCTCGATaGGCAGTGGTGGCCCGACGCGGTGGAAGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AARRPPPAPDAR*AVVARRGGRRR Trigger: CCGCCGCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | CGCACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTTaGTGCGCGCCGCCCGCCGCCAGCCCCAGATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RTQPQPTHRRRS*CAPPAASPRCS Trigger: CGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 72 bp | GCGCACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTaGCTGCGCGCCGCCCGCCGCCAGCCCCAGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: AHPAAAHAQAQV*LRAARRQPQML Trigger: GAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGTGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 90 bp | CAGGCGGCCGCGCACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTaGCTGCGCGCCGCCCGCCGCCAGCCCCAGATGCTCGATGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QAAAHPAAAHAQAQV*LRAARRQPQMLDEQ Trigger: CTGCTCATCGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGTGCGCGGCCGCCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 90 bp | GCGGCCGCGGGGGCGCCGGCGGTGGTCCGGCGCTGCTCCATGCCGTaGGGCAGGAAGCCGGCAATGATGGGCACCGGCCAGATGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: AAAGAPAVVRRCSMP*GRKPAMMGTGQMRA Trigger: CGCCCTCATCTGGCCGGTGCCCATCATTGCCGGCTTCCTGCCCAACGGCATGGAGCAGCGCCGGACCACCGCCGGCGCCCCCGCGGCCGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | AGCCTCCTCTGGGCCCGCGCGCTCTGGGGGCGCCGATaGCGCCGATGCCAGCAGACGCGGGGTGGAGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLWARALWGRR*RRCQQTRGGVF Trigger: GAACACTCCACCCCGCGTCTGCTGGCATCGGCGGCATCGGCGCCCCCAGAGCGCGCGGGCCCAGAGGAGGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | ACCCAGCCGCAGCCCACGCACAGGCGCAGGTCTTGCTaGGCGCCGCCCGCCGCCAGCCCCAGATGCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: TQPQPTHRRRSC*APPAASPRCSM Trigger: CATCGAGCATCTGGGGCTGGCGGCGGGCGGCGCGCAGCAAGACCTGCGCCTGTGCGTGGGCTGCGGCTGGGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 72 bp | GGGGCGCCGGCGGTGGTCCGGCGCTGCTCCATGCCGTaGGGCAGGAAGCCGGCAATGATGGGCACCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GAPAVVRRCSMP*GRKPAMMGTGQ Trigger: CTGGCCGGTGCCCATCATTGCCGGCTTCCTGCCCAACGGCATGGAGCAGCGCCGGACCACCGCCGGCGCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CCA 72 bp | CCCAGATGCTCGATGAGCAGTGGTGGCCCGACGCGGTaGAAGGCGGCGGCGAAGAAGGCGCGGCCGTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: PRCSMSSGGPTR*KAAAKKARPCA Trigger: CGCGCACGGCCGCGCCTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAGCATCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CCA 72 bp | GCCCGCCGCCAGCCCCAGATGCTCGATGAGCAGTGGTaGCCCGACGCGGTGGAAGGCGGCGGCGAAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARRQPQMLDEQW*PDAVEGGGEEG Trigger: GCCTTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAGCATCTGGGGCTGGCGGCGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CCA 72 bp | GCCGCCCGCCGCCAGCCCCAGATGCTCGATGAGCAGTaGTGGCCCGACGCGGTGGAAGGCGGCGGCGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: AARRQPQMLDEQ*WPDAVEGGGEE Trigger: TTCTTCGCCGCCGCCTTCCACCGCGTCGGGCCACCACTGCTCATCGAGCATCTGGGGCTGGCGGCGGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 90 bp | CCGCGGGCGGCCCCAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTaGCACGCTGATGTTGCAGGGCGCCGCCGGAGCCTCCTCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRAAPAHEQRAQHLS*HADVAGRRRSLLWA Trigger: GGCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTGGGGCCGCCCGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | TGGGCCCGCGCGCTCTGGGGGCGCCGATGCCGCCGATaGCAGCAGACGCGGGGTGGAGTGTTCGTTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: WARALWGRRCRR*QQTRGGVFVGE Trigger: TTCACCAACGAACACTCCACCCCGCGTCTGCTGGCATCGGCGGCATCGGCGCCCCCAGAGCGCGCGGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | CCGTGCGCGTTGGTAGAGAAGAGCAGCAGGTCGCACTaGAAGCCCCGCGGGCGGCCCCAGCGCACGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PCALVEKSSRSH*KPRGRPQRTSS Trigger: GCTGCTCGTGCGCTGGGGCCGCCCGCGGGGCTTGCAGTGCGACCTGCTGCTCTTCTCTACCAACGCGCACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 90 bp | CAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTTGCACGCTGATGTaGCAGGGCGCCGCCGGAGCCTCCTCTGGGCCCGCGCGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QRTSSELSICRCTLM*QGAAGASSGPARSG Trigger: CCCAGAGCGCGCGGGCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS GCA 72 bp | CCCCAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTTaGACGCTGATGTTGCAGGGCGCCGCCGGAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PQRTSSELSICR*TLMLQGAAGAS Trigger: GGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 72 bp | GCCCCAGCGCACGAGCAGCGAGCTCAGCATCTGTCGTaGCACGCTGATGTTGCAGGGCGCCGCCGGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: APAHEQRAQHLS*HADVAGRRRSL Trigger: GAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGCGCTGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 90 bp | GATGCCAGCAGACGCGGGGTGGAGTGTTCGTTGGTGAAGGACGCATaGGCCGAGGCGTTTGGGGGCGTCCCTGCAAGGCCGGGCGCATCC | + |
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Preference number: 6 (lower is better) Translates to: DASRRGVECSLVKDA*AEAFGGVPARPGAS Trigger: GGATGCGCCCGGCCTTGCAGGGACGCCCCCAAACGCCTCGGCCAATGCGTCCTTCACCAACGAACACTCCACCCCGCGTCTGCTGGCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS TCA 72 bp | GCACGAGCAGCGAGCTCAGCATCTGTCGTTGCACGCTaGTGTTGCAGGGCGCCGCCGGAGCCTCCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARAASSASVVAR*CCRAPPEPPLG Trigger: GCCCAGAGGAGGCTCCGGCGGCGCCCTGCAACATCAGCGTGCAACGACAGATGCTGAGCTCGCTGCTCGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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| CDS CAA 72 bp | GTCATGAAGCAGGCCACCAGCGTAGACTCGATGGGCTaGCGGTTCAGCCGCCAGCCCGGCTCGCCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VMKQATSVDSMG*RFSRQPGSPCS Trigger: GCTGCAGGGCGAGCCGGGCTGGCGGCTGAACCGCAAGCCCATCGAGTCTACGCTGGTGGCCTGCTTCATGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068140.6 |
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