Pregenerated sensors for TMEM156 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037913Ensembl transcript IDs: ENSMUST00000043352.8, ENSMUST00000212080.2, ENSMUST00000212194.2, ENSMUST00000212640.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGATGATGATGGGTGGTAAAGGTGAGCACCCTCTTCCTCTCTCATaGGCTTGTCTTCCACGGCTCACAGCAGCTCTCGACATGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KMMMGGKGEHPLPLS*ACLPRLTAALDMLL Trigger: CAAGAGCATGTCGAGAGCTGCTGTGAGCCGTGGAAGACAAGCCCATGAGAGAGGAAGAGGGTGCTCACCTTTACCACCCATCATCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR TCA 90 bp | GGCTCAACTGAACAAATCCCATGCTCCCTTTTCTCCTGCTCTGACTaGCTTACAGCTCAACTCCAAGACAAGGGATGCCAAGGGATGAGC | + |
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Preference number: 1 (lower is better) Translates to: GSTEQIPCSLFSCSD*LTAQLQDKGCQGMS Trigger: GCTCATCCCTTGGCATCCCTTGTCTTGGAGTTGAGCTGTAAGTCAGTCAGAGCAGGAGAAAAGGGAGCATGGGATTTGTTCAGTTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR TCA 90 bp | CTGACTGACTTACAGCTCAACTCCAAGACAAGGGATGCCAAGGGATaGGCTGACATTTCAGGGACAGCTGAACAGACCGAGAGATTAGTC | + |
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Preference number: 1 (lower is better) Translates to: LTDLQLNSKTRDAKG*ADISGTAEQTERLV Trigger: GACTAATCTCTCGGTCTGTTCAGCTGTCCCTGAAATGTCAGCTCATCCCTTGGCATCCCTTGTCTTGGAGTTGAGCTGTAAGTCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR CCA 90 bp | GGAGAAAATAGGCTCTTTAGCTCTTGTCACCCAATTCCAATGGGCTaGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: GENRLFSSCHPIPMG*LLKFITSVFSTQTE Trigger: TTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAGAGCTAAAGAGCCTATTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR-3UTR TCA 90 bp | CAATATGAAGAGCTGCTCTGGTGTCTATGTGTGCTTCTTATTGACACTGATACCATGCTCTTGTTCCCTTaGTCTCGTGGGTCAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: QYEELLWCLCVLLIDTDTMLLFP*SRGSDR Trigger: TCTATCTGACCCACGAGATCAAGGGAACAAGAGCAT...GGTATCAGTGTCAATAAGAAGCACACATAGACACCAGAGCAGCTCTTCATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR CAA 90 bp | TTTCTCAATATGAAGAGCTGCTCTGGTGTCTATGTGTGCTTCTTATaGACACTGATACCCAGGCTTCTTCCTGATACCCATGATGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLNMKSCSGVYVCFL*TLIPRLLPDTHDGF Trigger: AAAGCCATCATGGGTATCAGGAAGAAGCCTGGGTATCAGTGTCAATAAGAAGCACACATAGACACCAGAGCAGCTCTTCATATTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR GCA 72 bp | GGGCTTGTCTTCCACGGCTCACAGCAGCTCTCGACATaGTCTTGTTCCCTTGATCTCGTGGGTCAGATAGAC | + |
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Preference number: 3 (lower is better) Translates to: GLVFHGSQQLST*SCSLDLVGQID Trigger: GTCTATCTGACCCACGAGATCAAGGGAACAAGAGCATGTCGAGAGCTGCTGTGAGCCGTGGAAGACAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR TCA 72 bp | TTACAGCTCAACTCCAAGACAAGGGATGCCAAGGGATaGGCTGACATTTCAGGGACAGCTGAACAGACCGAG | + |
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Preference number: 3 (lower is better) Translates to: LQLNSKTRDAKG*ADISGTAEQTE Trigger: CTCGGTCTGTTCAGCTGTCCCTGAAATGTCAGCTCATCCCTTGGCATCCCTTGTCTTGGAGTTGAGCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR TCA 72 bp | GAACAAATCCCATGCTCCCTTTTCTCCTGCTCTGACTaGCTTACAGCTCAACTCCAAGACAAGGGATGCCAA | + |
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Preference number: 3 (lower is better) Translates to: EQIPCSLFSCSD*LTAQLQDKGCQ Trigger: TTGGCATCCCTTGTCTTGGAGTTGAGCTGTAAGTCAGTCAGAGCAGGAGAAAAGGGAGCATGGGATTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR CCA 72 bp | AGGCTCTTTAGCTCTTGTCACCCAATTCCAATGGGCTaGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: RLFSSCHPIPMG*LLKFITSVFST Trigger: GGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAGAGCTAAAGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR TCA 72 bp | CGTCTGTGTAGGAAAGACTATCCTGCACCTGGAACATaGCCCAATGAGAGGGGATTTTCATCCATGGTCATT | + |
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Preference number: 3 (lower is better) Translates to: RLCRKDYPAPGT*PNERGFSSMVI Trigger: AATGACCATGGATGAAAATCCCCTCTCATTGGGTCATGTTCCAGGTGCAGGATAGTCTTTCCTACACAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR TCA 72 bp | TCCAGTCCCAAGGCTACTGAAAATGAACTCCGATCTTaGGCTTGCTCTGAACTGATACAGCAGCTTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SSPKATENELRS*ACSELIQQLWE Trigger: TTCCCAAAGCTGCTGTATCAGTTCAGAGCAAGCTCAAGATCGGAGTTCATTTTCAGTAGCCTTGGGACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212194.2 |
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| 3UTR TCA 72 bp | AGGGGATTTTCATCCATGGTCATTGGCTCCTCAGAATaGAGACCTCATGTCCATGCTACGCAAGATGATGAT | + |
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Preference number: 3 (lower is better) Translates to: RGFSSMVIGSSE*RPHVHATQDDD Trigger: ATCATCATCTTGCGTAGCATGGACATGAGGTCTTCATTCTGAGGAGCCAATGACCATGGATGAAAATCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR CCA 72 bp | AAAATAGGCTCTTTAGCTCTTGTCACCCAATTCCAATaGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: KIGSLALVTQFQ*AGFSSLSRLCS Trigger: AGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAGAGCTAAAGAGCCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR GCA 90 bp | CTCTCGACATGCTCTTGTTCCCTTGATCTCGTGGGTCAGATAGACGCTCTCCAGCCCTCATGCTCAAAGTaGTCAGCTTCACAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSTCSCSLDLVGQIDALQPSCSK*SASQSH Trigger: GTGGCTCTGTGAAGCTGAGCACTTTGAGCATGAGGG...CTGGAGAGCGTCTATCTGACCCACGAGATCAAGGGAACAAGAGCATGTCGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR GCA 90 bp | GTGGTAAAGGTGAGCACCCTCTTCCTCTCTCATGGGCTTGTCTTCCACGGCTCAATTTCCTCTGCCGGTTaGAGAAAAGCCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VVKVSTLFLSHGLVFHGSISSAG*RKATEE Trigger: TTCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAAT...TGAGCCGTGGAAGACAAGCCCATGAGAGAGGAAGAGGGTGCTCACCTTTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | CTCTCGACATGCTCTTGTTCCCTTGATCTCGTGGGTCAGATAGACGCTCTCCAGCTCCGCACTTTCCTGTaGTCTTCAAGTATTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSTCSCSLDLVGQIDALQLRTFL*SSSILW Trigger: CCACAAAATACTTGAAGACCACAGGAAAGTGCGGAG...CTGGAGAGCGTCTATCTGACCCACGAGATCAAGGGAACAAGAGCATGTCGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| 3UTR CAA 72 bp | TTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTaGATGAGGGTCAACCGGAGACCTCCGATTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: FITSVFSTQTET*MRVNRRPPIPS Trigger: GGATGGAATCGGAGGTCTCCGGTTGACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGAGCACCCTCTTCCTCTCTCATGGGCTTGTCTTCCACGGCTCACAGCAGTTTGATGTTTGTTCCTaGGAAGTGAAATCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: KVSTLFLSHGLVFHGSQQFDVCS*EVKSTS Trigger: AGATGTGGATTTCACTTCTCAGGAACAAACATCAAA...CTGCTGTGAGCCGTGGAAGACAAGCCCATGAGAGAGGAAGAGGGTGCTCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | CTTGTCTTCCACGGCTCACAGCAGCTCTCGACATGCTCTTGTTCCCTTGATCTCAGGCGCAAGAAAATGTaGGCACAATTGTTCGTACTT | + |
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Preference number: 4 (lower is better) Translates to: LVFHGSQQLSTCSCSLDLRRKKM*AQLFVL Trigger: AAGTACGAACAATTGTGCTCACATTTTCTTGCGCCT...GAGATCAAGGGAACAAGAGCATGTCGAGAGCTGCTGTGAGCCGTGGAAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | CACGGCTCACAGCAGCTCTCGACATGCTCTTGTTCCCTTGATCTCGTGGGTCAGGAAACTGGAGTGATTTaGAGAGATTCCCATAATAGT | + |
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Preference number: 4 (lower is better) Translates to: HGSQQLSTCSCSLDLVGQETGVI*RDSHNS Trigger: ACTATTATGGGAATCTCTCCAAATCACTCCAGTTTC...CTGACCCACGAGATCAAGGGAACAAGAGCATGTCGAGAGCTGCTGTGAGCCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | TTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTCAACCGGTCTGTCACCACTCGCTaGCAATGTGCTATGACACAA | + |
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Preference number: 4 (lower is better) Translates to: FITSVFSTQTETLMRVNRSVTTR*QCAMTQ Trigger: TTGTGTCATAGCACATTGTCAGCGAGTGGTGACAGA...CCGGTTGACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGTAGATTTGTACTTATaGCTCTGCCATCTCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: GLASQVYHVCVLHPNRNVVDLYL*LCHLRT Trigger: AGTGCGGAGATGGCAGAGTCATAAGTACAAATCTAC...AACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR GCA 90 bp | CCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAATTTCCTCTGCCGGTTaGAGAAAAGCCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PIPMGWLLKFITSVFSTQISSAG*RKATEE Trigger: TTCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAAT...TTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212080.2 |
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| CDS-3UTR GCA 90 bp | ATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAAGTCTGTATTTCCTCTaGCGGTTGCAGAAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IPMGWLLKFITSVFSTQTSLYFL*RLQKSH Trigger: GTGGCTTTTCTGCAACCGGCAGAGGAAATACAGACT...TGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212080.2 |
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| CDS-3UTR GCA 90 bp | CGGGCTCAACTGAACAAATCCCATGCTCCCTTTTCTCCTGCTCTGACTGACTTAAACTTCAGCTCATGCTaGATACACCCCAAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: RAQLNKSHAPFSPALTDLNFSSC*IHPKRS Trigger: AGATCTTTTGGGGTGTATGCAGCATGAGCTGAAGTT...TAAGTCAGTCAGAGCAGGAGAAAAGGGAGCATGGGATTTGTTCAGTTGAGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR CCA 90 bp | CTCTCGACATGCTCTTGTTCCCTTGATCTCGTGGGTCAGATAGACGCTCTCCAGACGGGTTCTTTCTTTTaGTGTCTTGAAAAATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSTCSCSLDLVGQIDALQTGSFF*CLEKFW Trigger: CCAGAATTTTTCAAGACACCAAAAGAAAGAACCCGT...CTGGAGAGCGTCTATCTGACCCACGAGATCAAGGGAACAAGAGCATGTCGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | TTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGCTCCGCACTTTCCTGTaGTCTTCAAGTATTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: FQWAGFSSLSRLCSPPKQLRTFL*SSSILW Trigger: CCACAAAATACTTGAAGACCACAGGAAAGTGCGGAG...CTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR CCA 90 bp | TTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGCCTTTGAGTGGACTCTaGAATAACCCTCATGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: FQWAGFSSLSRLCSPPKQPLSGL*NNPHAQ Trigger: TTGAGCATGAGGGTTATTCCAGAGTCCACTCAAAGG...CTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR CAA 72 bp | CATGACCCAATGAGAGGGGATTTTCATCCATGGTCATaGGCTCCTCAGAATGAAGACCTCATGTCCATGCTA | + |
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Preference number: 4 (lower is better) Translates to: HDPMRGDFHPWS*APQNEDLMSML Trigger: TAGCATGGACATGAGGTCTTCATTCTGAGGAGCCAATGACCATGGATGAAAATCCCCTCTCATTGGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | GGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: GLASQVYHVCVLHPNRNVLWKLE*FGEIPI Trigger: TATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAG...AACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CGGGCTCAACTGAACAAATCCCATGCTCCCTTTTCTCCTGCTCTGACTGACTTACATGACAAGACCTTTTaGTGTTTGTTCCTGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RAQLNKSHAPFSPALTDLHDKTF*CLFLRS Trigger: ACTTCTCAGGAACAAACATCAAAAGGTCTTGTCATG...TAAGTCAGTCAGAGCAGGAGAAAAGGGAGCATGGGATTTGTTCAGTTGAGCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212080.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTAGGCGCAAGAAAATGTaGGCACAATTGTTCGTACTT | + |
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Preference number: 4 (lower is better) Translates to: GLASQVYHVCVLHPNRNVRRKKM*AQLFVL Trigger: AAGTACGAACAATTGTGCTCACATTTTCTTGCGCCT...AACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | TTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTCAACCGGAGGCGCAAGAAAATGTaGGCACAATTGTTCGTACTT | + |
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Preference number: 4 (lower is better) Translates to: FITSVFSTQTETLMRVNRRRKKM*AQLFVL Trigger: AAGTACGAACAATTGTGCTCACATTTTCTTGCGCCT...CCGGTTGACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | TCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTTCTGTCACCACTCGCTaGCAATGTGCTATGACACAA | + |
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Preference number: 4 (lower is better) Translates to: SQVYHVCVLHPNRNVDEGSVTTR*QCAMTQ Trigger: TTGTGTCATAGCACATTGTCAGCGAGTGGTGACAGA...ACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | ATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACACACAGGGTCAGCTTTTaGTGTTTGTTCCTGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IPMGWLLKFITSVFSTQTHRVSF*CLFLRS Trigger: ACTTCTCAGGAACAAACATCAAAAGCTGACCCTGTG...TGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212640.2 |
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| CDS-3UTR GCA 90 bp | CCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAAACTTCAGCTCATGCTaGATACACCCCAAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PIPMGWLLKFITSVFSTQNFSSC*IHPKRS Trigger: AGATCTTTTGGGGTGTATGCAGCATGAGCTGAAGTT...TTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR CCA 90 bp | CTTGTCACCCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCTCCGCACTTTCCTGTaGTCTTCAAGTATTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVTQFQWAGFSSLSRLCSLRTFL*SSSILW Trigger: CCACAAAATACTTGAAGACCACAGGAAAGTGCGGAG...AGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACACCTTTGAGTGGACTCTaGAATAACCCTCATGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: IPMGWLLKFITSVFSTQTPLSGL*NNPHAQ Trigger: TTGAGCATGAGGGTTATTCCAGAGTCCACTCAAAGG...TGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| 3UTR CAA 72 bp | ATGAAGAGCTGCTCTGGTGTCTATGTGTGCTTCTTATaGACACTGATACCCAGGCTTCTTCCTGATACCCAT | + |
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Preference number: 4 (lower is better) Translates to: MKSCSGVYVCFL*TLIPRLLPDTH Trigger: ATGGGTATCAGGAAGAAGCCTGGGTATCAGTGTCAATAAGAAGCACACATAGACACCAGAGCAGCTCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | CTTGTCACCCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: LVTQFQWAGFSSLSRLCSLWKLE*FGEIPI Trigger: TATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAG...AGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CGGGCTCAACTGAACAAATCCCATGCTCCCTTTTCTCCTGCTCTGACTGACTTATTTGATGTTTGTTCCTaGGAAGTGAAATCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: RAQLNKSHAPFSPALTDLFDVCS*EVKSTS Trigger: AGATGTGGATTTCACTTCTCAGGAACAAACATCAAA...TAAGTCAGTCAGAGCAGGAGAAAAGGGAGCATGGGATTTGTTCAGTTGAGCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CTTGTCACCCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCATTGATCCCCTCATaGCAAGACCTTTTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVTQFQWAGFSSLSRLCSPLIPS*QDLLMF Trigger: AAACATCAAAAGGTCTTGTCATGAGGGGATCAATGG...AGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGGGTGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212080.2 |
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| CDS-3UTR TCA 90 bp | CTATCAGTACTTCCTCAGTTGGATCTAAGCATTTATCAGCCCACTCAGTCCCAAGTAGATTTGTACTTATaGCTCTGCCATCTCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: LSVLPQLDLSIYQPTQSQVDLYL*LCHLRT Trigger: AGTGCGGAGATGGCAGAGTCATAAGTACAAATCTAC...TTGGGACTGAGTGGGCTGATAAATGCTTAGATCCAACTGAGGAAGTACTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | TCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTGTAGATTTGTACTTATaGCTCTGCCATCTCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: SQVYHVCVLHPNRNVDEGVDLYL*LCHLRT Trigger: AGTGCGGAGATGGCAGAGTCATAAGTACAAATCTAC...ACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | TCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTACTAAGGGTAACCTTTaGGTGGACTCTGGAATAACC | + |
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Preference number: 4 (lower is better) Translates to: SQVYHVCVLHPNRNVDEGTKGNL*VDSGIT Trigger: GGTTATTCCAGAGTCCACTCAAAGGTTACCCTTAGT...ACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR GCA 90 bp | TTCTTATTGACACTGATACCCAGGCTTCTTCCTGATACCCATGATGGCTTTAACAGTCTGTATTTCCTCTaGCGGTTGCAGAAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLTLIPRLLPDTHDGFNSLYFL*RLQKSH Trigger: GTGGCTTTTCTGCAACCGGCAGAGGAAATACAGACT...GTTAAAGCCATCATGGGTATCAGGAAGAAGCCTGGGTATCAGTGTCAATAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | TTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGGAAACTGGAGTGATTTaGAGAGATTCCCATAATAGT | + |
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Preference number: 4 (lower is better) Translates to: FQWAGFSSLSRLCSPPKQETGVI*RDSHNS Trigger: ACTATTATGGGAATCTCTCCAAATCACTCCAGTTTC...CTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CAATATGAAGAGCTGCTCTGGTGTCTATGTGTGCTTCTTATTGACACTGATACCCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: QYEELLWCLCVLLIDTDTLWKLE*FGEIPI Trigger: TATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAG...GGTATCAGTGTCAATAAGAAGCACACATAGACACCAGAGCAGCTCTTCATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | TTGACACTGATACCCAGGCTTCTTCCTGATACCCATGATGGCTTTAACAAATGTTTTGTTCCTGAGAAGTaGAATCCACATCTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LTLIPRLLPDTHDGFNKCFVPEK*NPHLLW Trigger: CCAAAGGAGATGTGGATTTCACTTCTCAGGAACAAA...ACATTTGTTAAAGCCATCATGGGTATCAGGAAGAAGCCTGGGTATCAGTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | ATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACATTTGATGTTTGTTCCTaGGAAGTGAAATCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: IPMGWLLKFITSVFSTQTFDVCS*EVKSTS Trigger: AGATGTGGATTTCACTTCTCAGGAACAAACATCAAA...TGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CATTCACCTATCAGTACTTCCTCAGTTGGATCTAAGCATTTATCAGCCCACTCACCATTGATCCCCTCATaGCAAGACCTTTTGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: HSPISTSSVGSKHLSAHSPLIPS*QDLLMF Trigger: AAACATCAAAAGGTCTTGTCATGAGGGGATCAATGG...TGAGTGGGCTGATAAATGCTTAGATCCAACTGAGGAAGTACTGATAGGTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | CCAATTCCAATGGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAATAAATCTACAAGTGTaGTTGAGAGACTTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PIPMGWLLKFITSVFSTQINLQV*LRDFFL Trigger: CAGGAAAAAGTCTCTCAACCACACTTGTAGATTTAT...TTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCCATTGGAATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS-3UTR TCA 90 bp | CAATATGAAGAGCTGCTCTGGTGTCTATGTGTGCTTCTTATTGACACTGATACCCATGACAAGACCTTTTaGTGTTTGTTCCTGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QYEELLWCLCVLLIDTDTHDKTF*CLFLRS Trigger: ACTTCTCAGGAACAAACATCAAAAGGTCTTGTCATG...GGTATCAGTGTCAATAAGAAGCACACATAGACACCAGAGCAGCTCTTCATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR TCA 90 bp | TTGACACTGATACCCAGGCTTCTTCCTGATACCCATGATGGCTTTAACAAATGTTTTCTTTTGGTGTCTTaGAAAATTCTGGCAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: LTLIPRLLPDTHDGFNKCFLLVS*KILAGL Trigger: TAGTCCTGCCAGAATTTTTCAAGACACCAAAAGAAA...ACATTTGTTAAAGCCATCATGGGTATCAGGAAGAAGCCTGGGTATCAGTGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CCA 90 bp | CCTCAGTTGGATCTAAGCATTTATCAGCCCACTCAGTCCCAAAATAAAATTCTCATAAATCTACAAGTGTaGTTGAGAGACTTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PQLDLSIYQPTQSQNKILINLQV*LRDFFL Trigger: CAGGAAAAAGTCTCTCAACCACACTTGTAGATTTAT...GAGAATTTTATTTTGGGACTGAGTGGGCTGATAAATGCTTAGATCCAACTGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS-3UTR CAA 90 bp | CTCATGGGCTTGTCTTCCACGGCTCACAGCAGCTCTCGACATGCTCTTGTTCCCTATTTCCTCTGCCGGTaGCAGAAAAGCCACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LMGLSSTAHSSSRHALVPYFLCR*QKSHRR Trigger: TCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAATA...GGGAACAAGAGCATGTCGAGAGCTGCTGTGAGCCGTGGAAGACAAGCCCATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS TCA 90 bp | AGTGTGGTTGAGAGACTTTTTCCTGGCCAGATCTTCATCGACAGCTaGGGCTTTTCCAGGACGGGTTTCGGGAGTGCAGGTAGTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SVVERLFPGQIFIDS*GFSRTGFGSAGSVV Trigger: GACAACACTACCTGCACTCCCGAAACCCGTCCTGGAAAAGCCTCAGCTGTCGATGAAGATCTGGCCAGGAAAAAGTCTCTCAACCACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS-3UTR CAA 90 bp | CTTGTCTTCCACGGCTCACAGCAGCTCTCGACATGCTCTTGTTCCCTTGATCTCAATCTCAGCGAAGCTTaGGAAACTGGAGTGATTTGG | + |
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Preference number: 5 (lower is better) Translates to: LVFHGSQQLSTCSCSLDLNLSEA*ETGVIW Trigger: CCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATT...GAGATCAAGGGAACAAGAGCATGTCGAGAGCTGCTGTGAGCCGTGGAAGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS TCA 90 bp | TCCTTCACAGGGTCAGCTATAAGAGCGGCGGTGATGTTAAAATACTaGCAGGGTGAGGACAAATCACTTGCCGTCACTTCCATTGATCCC | + |
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Preference number: 5 (lower is better) Translates to: SFTGSAIRAAVMLKY*QGEDKSLAVTSIDP Trigger: GGGATCAATGGAAGTGACGGCAAGTGATTTGTCCTCACCCTGTCAGTATTTTAACATCACCGCCGCTCTTATAGCTGACCCTGTGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 |
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| CDS-3UTR CAA 90 bp | TTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTCAACCGGTATTTCCTCTGCCGGTaGCAGAAAAGCCACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: FITSVFSTQTETLMRVNRYFLCR*QKSHRR Trigger: TCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAATA...CCGGTTGACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212080.2 |
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| CDS TCA 90 bp | CTTGTGATGCCTCGGCAAATCTCAGCGAAGCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATAATAGTCTGTATTTCCTCTGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: LVMPRQISAKLWKLE*FGEIPIIVCISSAG Trigger: ACCGGCAGAGGAAATACAGACTATTATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATTTGCCGAGGCATCACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 |
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| CDS TCA 90 bp | CACCCCAAAAGATCTCGTCTGTCACCACTCGCTGACAATGTGCTATaGCACAAATGTGTTCCCATCGGTAGCTTGATAGTATGTTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HPKRSRLSPLADNVL*HKCVPIGSLIVCCF Trigger: GAAGCAACATACTATCAAGCTACCGATGGGAACACATTTGTGTCATAGCACATTGTCAGCGAGTGGTGACAGACGAGATCTTTTGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGGCTTCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTTCACAGGGTCAGCTTTaGATGTTTGTTCCTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GLASQVYHVCVLHPNRNVSQGQL*MFVPEK Trigger: CTTCTCAGGAACAAACATCAAAAGCTGACCCTGTGA...AACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGAAGCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212640.2 |
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| CDS TCA 90 bp | TGGATTCACAAACCAAACACAAGGAACACATCGGCAATCTACTTGTaGTGCCTCGGCAAATCTCAGCGAAGCTTTGGAAACTGGAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: WIHKPNTRNTSAIYL*CLGKSQRSFGNWSD Trigger: ATCACTCCAGTTTCCAAAGCTTCGCTGAGATTTGCCGAGGCATCACAAGTAGATTGCCGATGTGTTCCTTGTGTTTGGTTTGTGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 90 bp | CTTGTGATGCCTCGGCAAATCTCAGCGAAGCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATAATAGTCTGTATTTCCTCGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LVMPRQISAKLWKLE*FGEIPIIVCISSNF Trigger: GAAGTTCGAGGAAATACAGACTATTATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATTTGCCGAGGCATCACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS-3UTR CAA 90 bp | TCTCAAGTTTATCACGTCTGTGTTCTCCACCCAAACAGAAACGTTGATGAGGGTAATCTCAGCGAAGCTTaGGAAACTGGAGTGATTTGG | + |
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Preference number: 5 (lower is better) Translates to: SQVYHVCVLHPNRNVDEGNLSEA*ETGVIW Trigger: CCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATT...ACCCTCATCAACGTTTCTGTTTGGGTGGAGAACACAGACGTGATAAACTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS TCA 90 bp | TGTCTTCCTTCACAGGGTCAGCTTTTGATGTTTGTTCCTGAGAAGTaGAATCCACATCTCCTTTGGATTCACAAACCAAACACAAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: CLPSQGQLLMFVPEK*NPHLLWIHKPNTRN Trigger: GTTCCTTGTGTTTGGTTTGTGAATCCAAAGGAGATGTGGATTTCACTTCTCAGGAACAAACATCAAAAGCTGACCCTGTGAAGGAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212640.2 |
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| CDS-3UTR CAA 90 bp | CTATCAGTACTTCCTCAGTTGGATCTAAGCATTTATCAGCCCACTCAGTCCCAAAAATCCACATCTCCTTaGGATTCACAAACCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: LSVLPQLDLSIYQPTQSQKSTSP*DSQTKH Trigger: GTGTTTGGTTTGTGAATCCAAAGGAGATGTGGATTT...TTGGGACTGAGTGGGCTGATAAATGCTTAGATCCAACTGAGGAAGTACTGATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043352.8 |
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| CDS CAA 72 bp | GCTTTTCCAGGACGGGTTTCGGGAGTGCAGGTAGTGTaGTCTTCCTTCACAGGGTCAGCTATAAGAGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: AFPGRVSGVQVV*SSFTGSAIRAA Trigger: CGCCGCTCTTATAGCTGACCCTGTGAAGGAAGACAACACTACCTGCACTCCCGAAACCCGTCCTGGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 |
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| CDS TCA 72 bp | GAGAGACTTTTTCCTGGCCAGATCTTCATCGACAGCTaGGGCTTTTCCAGGACGGGTTTCGGGAGTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ERLFPGQIFIDS*GFSRTGFGSAG Trigger: ACCTGCACTCCCGAAACCCGTCCTGGAAAAGCCTCAGCTGTCGATGAAGATCTGGCCAGGAAAAAGTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 72 bp | GGGAGCTCTTCCATGACCCGCACTAAGGGTAACCTTTaGGTGGACTCTGGAATAACCCTCATGCTCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSSSMTRTKGNL*VDSGITLMLKV Trigger: CACTTTGAGCATGAGGGTTATTCCAGAGTCCACTCAAAGGTTACCCTTAGTGCGGGTCATGGAAGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212080.2 ENSMUST00000212640.2 |
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| CDS CAA 72 bp | GCTTTTCCAGGACGGGTTTCGGGAGTGCAGGTAGTGTaGTCTTCCTTCACAGGGTCAGCTTTTGATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: AFPGRVSGVQVV*SSFTGSAFDVC Trigger: ACAAACATCAAAAGCTGACCCTGTGAAGGAAGACAACACTACCTGCACTCCCGAAACCCGTCCTGGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212640.2 |
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| CDS TCA 72 bp | CATACACCCCAAAAGATCTCGTCTGTCACCACTCGCTaGCAATGTGCTATGACACAAATGTGTTCCCATCGG | + |
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Preference number: 6 (lower is better) Translates to: HTPQKISSVTTR*QCAMTQMCSHR Trigger: CCGATGGGAACACATTTGTGTCATAGCACATTGTCAGCGAGTGGTGACAGACGAGATCTTTTGGGGTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 72 bp | AAACCAAACACAAGGAACACATCGGCAATCTACTTGTaGTGCCTCGGCAAATCTCAGCGAAGCTTTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: KPNTRNTSAIYL*CLGKSQRSFGN Trigger: GTTTCCAAAGCTTCGCTGAGATTTGCCGAGGCATCACAAGTAGATTGCCGATGTGTTCCTTGTGTTTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 72 bp | CCTCCTCTTAAGAGACCAGATGTAGATTTGTACTTATaGCTCTGCCATCTCCGCACTTTCCTGTGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PPLKRPDVDLYL*LCHLRTFLWSS Trigger: TGAAGACCACAGGAAAGTGCGGAGATGGCAGAGTCATAAGTACAAATCTACATCTGGTCTCTTAAGAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS CAA 90 bp | CATCGGCAATCTACTTGTGATGCCTCGGCAAATCTCAGCGAAGCTTaGGAAACTGGAGTGATTTGGAGAGATTCCCATAATAGTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: HRQSTCDASANLSEA*ETGVIWRDSHNSLY Trigger: ATACAGACTATTATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATTTGCCGAGGCATCACAAGTAGATTGCCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 72 bp | CCTCGGCAAATCTCAGCGAAGCTTTGGAAACTGGAGTaGTTTGGAGAGATTCCCATAATAGTCTGTATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PRQISAKLWKLE*FGEIPIIVCIS Trigger: GGAAATACAGACTATTATGGGAATCTCTCCAAATCACTCCAGTTTCCAAAGCTTCGCTGAGATTTGCCGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS TCA 72 bp | TCACAGGGTCAGCTTTTGATGTTTGTTCCTGAGAAGTaGAATCCACATCTCCTTTGGATTCACAAACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SQGQLLMFVPEK*NPHLLWIHKPN Trigger: GTTTGGTTTGTGAATCCAAAGGAGATGTGGATTTCACTTCTCAGGAACAAACATCAAAAGCTGACCCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212640.2 |
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| CDS CAA 90 bp | GTGATTTGGAGAGATTCCCATAATAGTCTGTATTTCCTCTGCCGGTaGCAGAAAAGCCACAGAAGAAAAATTGAAAGAAGAAAGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VIWRDSHNSLYFLCR*QKSHRRKIERRKRR Trigger: TCTCCGCTTTCTTCTTTCAATTTTTCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAATACAGACTATTATGGGAATCTCTCCAAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 |
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| CDS CCA 72 bp | GCACAATTGTTCGTACTTTTCATAAATCTACAAGTGTaGTTGAGAGACTTTTTCCTGGCCAGATCTTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: AQLFVLFINLQV*LRDFFLARSSS Trigger: CGATGAAGATCTGGCCAGGAAAAAGTCTCTCAACCACACTTGTAGATTTATGAAAAGTACGAACAATTGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 ENSMUST00000212194.2 ENSMUST00000212640.2 |
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| CDS CAA 72 bp | AGAGATTCCCATAATAGTCTGTATTTCCTCTGCCGGTaGCAGAAAAGCCACAGAAGAAAAATTGAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RDSHNSLYFLCR*QKSHRRKIERR Trigger: TCTTCTTTCAATTTTTCTTCTGTGGCTTTTCTGCAACCGGCAGAGGAAATACAGACTATTATGGGAATCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043352.8 ENSMUST00000212080.2 |
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