Pregenerated sensors for TMEM151B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096847Ensembl transcript IDs: ENSMUST00000180252.3
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCATCTGGCCCCACCCTCAGACCCGGGAACACAGTTGCTGGCTaGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATCTCC | + |
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Preference number: 1 (lower is better) Translates to: LPSGPTLRPGNTVAG*KPTLLLFTKPPPIS Trigger: GGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTCTGAGGGTGGGGCCAGATGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR TCA 90 bp | CCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTaGGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGTGTGTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: PRGPALQGLFARSRR*VEHQRGLGSDCVCA Trigger: GGCACACACACAGTCACTCCCAAGCCCCCTCTGGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 90 bp | TTCCCTCATACCCTGCCTGGCCTTAGCCACCATCCTGCCTTCCCCTaGTACACACAGGGAGCACAACACAAGGAGAGGCAGGAAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FPHTLPGLSHHPAFP*YTQGAQHKERQEGE Trigger: TTCTCCTTCCTGCCTCTCCTTGTGTTGTGCTCCCTGTGTGTAGCAGGGGAAGGCAGGATGGTGGCTAAGGCCAGGCAGGGTATGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 90 bp | AGGACACTGTTGCCCAGGAAACCCAGTGGTGTGCTTGCTCCCTTCTaGCCAAACCTATCCTTCTCTGACACCCCTCCCTCCTCACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: RTLLPRKPSGVLAPF*PNLSFSDTPPSSPK Trigger: CTTGGGTGAGGAGGGAGGGGTGTCAGAGAAGGATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CCA 90 bp | ATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTaGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATC | + |
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Preference number: 1 (lower is better) Translates to: ILRTYSLPGTLSLSP*HAVTAHHGATPIGI Trigger: GATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 90 bp | GTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTaGACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VYLKDGRLQLQSKRA*TPGTLCKKQALSRA Trigger: TGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTGAGGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 90 bp | CAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTaGCCACCATGGGGCCACACCCATAGGAATCACAGACTATGGATT | + |
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Preference number: 1 (lower is better) Translates to: QSSRYPLLESLARCD*PPWGHTHRNHRLWI Trigger: AATCCATAGTCTGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CCA 90 bp | AGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCATaGGGCCACACCCATAGGAATCACAGACTATGGATTCATGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RYPLLESLARCDCPP*GHTHRNHRLWIHER Trigger: CCTCTCATGAATCCATAGTCTGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CCA 90 bp | CAAGAAGCAGAGGGAGCAAGATTGGATGGATGTGAGCCCAATCCCTaGGTACTAAGTCTGCTGGGAAAACGTCAGCCAGGGCAGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QEAEGARLDGCEPNP*VLSLLGKRQPGQLG Trigger: TCCCAGCTGCCCTGGCTGACGTTTTCCCAGCAGACTTAGTACCCAGGGATTGGGCTCACATCCATCCAATCTTGCTCCCTCTGCTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR TCA 90 bp | GAGGCCAGAAACGGGTCCCACAACATACTAACAGTCAAGACTCGATaGAAGCCTGGAAGGGAAATCTCGAGTGTGCATGGGAAAGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: EARNGSHNILTVKTR*KPGREISSVHGKGG Trigger: ACCCCCTTTCCCATGCACACTCGAGATTTCCCTTCCAGGCTTTCATCGAGTCTTGACTGTTAGTATGTTGTGGGACCCGTTTCTGGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR TCA 90 bp | GTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTaGTGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VQSLRLEFHDRKATV*CTQFDRGLSSPEPG Trigger: GCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR TCA 90 bp | CCCCTAAATGAGAACAAGACATTCAGGTACCAGTTGGCCAAGAACTaGGGCCTGAGGCCACAGCTCACTCAGTACCTGTGCTCCAATAGT | + |
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Preference number: 1 (lower is better) Translates to: PLNENKTFRYQLAKN*GLRPQLTQYLCSNS Trigger: ACTATTGGAGCACAGGTACTGAGTGAGCTGTGGCCTCAGGCCTCAGTTCTTGGCCAACTGGTACCTGAATGTCTTGTTCTCATTTAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 90 bp | GTCATCCACACTTTTATTATCCATCAGTGTGATTTGTACAATCTTTaGGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCC | + |
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Preference number: 1 (lower is better) Translates to: VIHTFIIHQCDLYNL*AWNSMTERPQCDAP Trigger: GGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACACTGATGGATAATAAAAGTGTGGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CCA 90 bp | CACACTTTTATTATCCATCAGTGTGATTTGTACAATCTTTGCGCTTaGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTG | + |
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Preference number: 1 (lower is better) Translates to: HTFIIHQCDLYNLCA*NSMTERPQCDAPNL Trigger: CAAATTGGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACACTGATGGATAATAAAAGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACGCCAGCCCATCGCCATCCCTCCAGGGCTAGTCTCAGTCTACCAGCCACCTGCTGGAACTCGGTaGGGACTGGGAGAGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: TARQPIAIPPGLVSVYQPPAGTR*GLGEKH Trigger: GTGTTTCTCTCCCAGTCCTCACCGAGTTCCAGCAGG...TGGCTGGTAGACTGAGACTAGCCCTGGAGGGATGGCGATGGGCTGGCGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 90 bp | CAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTaGAGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCC | + |
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Preference number: 2 (lower is better) Translates to: QALILRTYSLPGTLS*SPWHAVTAHHGATP Trigger: GGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTTTCCAGAAAAGGCCTaGGGAGCCCTCCCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRFPEKA*GALPAS Trigger: GGAGGCTGGGAGGGCTCCGCAGGCCTTTTCTGGAAA...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACCACAGACATGCACACTaGGGTGGAGGGGTAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPHLSPRPWHPHNRASHHRHAH*GGGVRG Trigger: CCCTCTTACCCCTCCACCCCAGTGTGCATGTCTGTG...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACTCCCTTCCCTTGCCCTaGACCCTGACAACAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LSPHLSPRPWHPHNRASHSLPLP*TLTTAL Trigger: AAGAGCTGTTGTCAGGGTGCAGGGCAAGGGAAGGGA...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCCATCCTGCCTTCCCCTaGTACACACAGGGAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGHPAFP*YTQGAQ Trigger: TTGTGCTCCCTGTGTGTAGCAGGGGAAGGCAGGATG...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 90 bp | AGCCTCTGTCTGTGTACAGGGAAGCAGTCTCAGATCACTGAGGTCTaGTCTGAGAGTGCCCCTCACCTCCTGCCTTCCCTCATACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLCLCTGKQSQITEV*SESAPHLLPSLIPC Trigger: GCAGGGTATGAGGGAAGGCAGGAGGTGAGGGGCACTCTCAGACAAGACCTCAGTGATCTGAGACTGCTTCCCTGTACACAGACAGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTCAGGCTCTGTCCACTTaGTCACTCACTCACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LCLTPSDSSRVQTCRCEGQALST*SLTHPW Trigger: CCAGGGGTGAGTGAGTGAGCAAGTGGACAGAGCCTG...ACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACGACTCGATGAAAGCCTaGAAGGGAAATCTCGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSPHLSPRPWHPHNRASHDSMKA*KGNLEC Trigger: ACACTCGAGATTTCCCTTCCAGGCTTTCATCGAGTC...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTAGAGCTTCAACTCGCTaGACAGGAAGAAGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RKLSPHLSPRPWHPHNRARASTR*TGRSGG Trigger: CCCTCCACTTCTTCCTGTCCAGCGAGTTGAAGCTCT...AGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAGCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 90 bp | CTCGGCTCTATGGAGGCATGTGTGAGGGACATCCTTCTTAAGTGTTaGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGCCAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LGSMEACVRDILLKC*LHCLLRKSYSTPAH Trigger: ATGGGCTGGCGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTCCCTCACACATGCCTCCATAGAGCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTTCAAGGTATGGAGATaGATACTGGGCTGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRFKVWR*ILGCHL Trigger: CAGATGGCAGCCCAGTATTCATCTCCATACCTTGAA...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGTGCCCCTCACCTCCTaGCTTCCCTCATACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSVPLTS*LPSYPA Trigger: GGCAGGGTATGAGGGAAGGCAGGAGGTGAGGGGCAC...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGTTGCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATACACCTCTGCCCAGGTaGATGGGATTCTTAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSCWLEANSAALHQTTAHTPLPR*MGFLRE Trigger: CTCTCTTAAGAATCCCATCCACCTGGGCAGAGGTGT...ATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGAACTCGGTGAGGACTaGGAGAGAAACACCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LCLTPSDSSRVQTCRCEGELGED*ERNTSA Trigger: GGCAGAGGTGTTTCTCTCCCAGTCCTCACCGAGTTC...ACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTGCCCAGGAAACCCAGTGGTGTGCTTGCTCCCTTCTGCCCAAACCTATCAGGGGAGAGCAAAGTTaGTGTCAGAGCTTTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TVAQETQWCACSLLPKPIRGEQS*CQSFEG Trigger: CCCTTCAAAGCTCTGACACCAACTTTGCTCTCCCCT...GATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATGGAGAGAAACACCTCTaGCCAGGTGGATGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: GGEAVCARRPRQKWSGKNGEKHL*PGGWDS Trigger: AGAATCCCATCCACCTGGGCAGAGGTGTTTCTCTCC...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTCTGTGCGTGTGTGTGTaGGAGGTGAGGCTGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSLCVCV*EVRLSV Trigger: CACAGACAGCCTCACCTCCCACACACACACGCACAG...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGGAAGCCAACTCTGCTaGTCTTCACCAAACCACCGC | + |
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Preference number: 2 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSGSQLC*SSPNHR Trigger: GCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCC...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTCTCACTCAGTACCTGTaGTCCAATAGTCAACACCAC | + |
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Preference number: 2 (lower is better) Translates to: LCLTPSDSSRVQTCRCEGLTQYL*SNSQHH Trigger: GTGGTGTTGACTATTGGAGCACAGGTACTGAGTGAG...ACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | GACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGAACACAGTTGCTGGCTaGAAGCCAACTCTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: DILLKCLLHCLLRKSYSTNTVAG*KPTLLL Trigger: GAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTT...CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | GACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGTATGGAGATGAATACTaGGCTGCCATCTGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DILLKCLLHCLLRKSYSTYGDEY*AAIWPH Trigger: GTGGGGCCAGATGGCAGCCCAGTATTCATCTCCATA...CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAAGTCCTTCCCTCCTTaGAGCTGTAAGATGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GGEAVCARRPRQKWSGKNKSFPP*SCKMAK Trigger: CTTGGCCATCTTACAGCTCCAAGGAGGGAAGGACTT...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTAACAAACAACAGTGCTaGGTGTGGCTTTCCCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSNKQQC*VWLSQR Trigger: CCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTT...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATCTATGGAGGCATGTGTaGGGGACATCCTTCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: GGEAVCARRPRQKWSGKNLWRHV*GTSFLS Trigger: ACTTAAGAAGGATGTCCCTCACACATGCCTCCATAG...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGAGACCTAGGCAGAAATaGTCAGGCAAAAATAATAAC | + |
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Preference number: 2 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRRPRQK*SGKNNN Trigger: GTTATTATTTTTGCCTGACCATTTCTGCCTAGGTCT...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAATAACGTCATGGAGCCCCTCTaGAGACCTAGAGCTTCAACT | + |
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Preference number: 2 (lower is better) Translates to: EAVCARRPRQKWSGKNNNVMEPL*RPRAST Trigger: AGTTGAAGCTCTAGGTCTTCAGAGGGGCTCCATGAC...GTTATTATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR GCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCAAGCCCCAAGTGCTTTaGCTTTCTTGGTACCCACCA | + |
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Preference number: 2 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLKPQVL*LSWYPP Trigger: TGGTGGGTACCAAGAAAGGCAAAGCACTTGGGGCTT...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR-3UTR TCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCAAGCTGCCCCTAAATaGGAACAAGACATTCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLQAAPK*EQDIQV Trigger: TACCTGAATGTCTTGTTCTCATTTAGGGGCAGCTTG...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CCA 72 bp | GGCCCCACCCTCAGACCCGGGAACACAGTTGCTGGCTaGAAGCCAACTCTGCTGCTCTTCACCAAACCACCG | + |
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Preference number: 3 (lower is better) Translates to: GPTLRPGNTVAG*KPTLLLFTKPP Trigger: CGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTCTGAGGGTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 72 bp | ACCCTGCCTGGCCTTAGCCACCATCCTGCCTTCCCCTaGTACACACAGGGAGCACAACACAAGGAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TLPGLSHHPAFP*YTQGAQHKERQ Trigger: CTGCCTCTCCTTGTGTTGTGCTCCCTGTGTGTAGCAGGGGAAGGCAGGATGGTGGCTAAGGCCAGGCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 72 bp | CCGGGAACACAGTTGCTGGCTGGAAGCCAACTCTGCTaGTCTTCACCAAACCACCGCCCATCTCCACGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGTQLLAGSQLC*SSPNHRPSPRG Trigger: TCCCCGTGGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR GCA 72 bp | GCCATCTGGCCCCACCCTCAGACCCGGGAACACAGTTaGTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: AIWPHPQTREHS*WLEANSAALHQ Trigger: TTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTCTGAGGGTGGGGCCAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | CCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTaGGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: PALQGLFARSRR*VEHQRGLGSDC Trigger: ACAGTCACTCCCAAGCCCCCTCTGGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR GCA 72 bp | CTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTaGAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQSKRACTPGTL*KKQALSRAPEG Trigger: CCCCTCTGGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | ATCTGGCCCCACCCTCAGACCCGGGAACACAGTTGCTaGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: IWPHPQTREHSC*LEANSAALHQT Trigger: GGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTCTGAGGGTGGGGCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | TCTCAGGCTCTGTCCACTTGCTCACTCACTCACCCCTaGCGGGCTTTAATGAGGACCTCCAGGATGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQALSTCSLTHP*RALMRTSRMAS Trigger: GGAGGCCATCCTGGAGGTCCTCATTAAAGCCCGCCAGGGGTGAGTGAGTGAGCAAGTGGACAGAGCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGAAGCTCAGCCCCCATTaGAGCCCTAGACCATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRKLSPH*SPRPWH Trigger: ATGCCATGGTCTAGGGCTCAAATGGGGGCTGAGCTT...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR GCA 72 bp | TTGCCCAGGAAACCCAGTGGTGTGCTTGCTCCCTTCTaGCCAAACCTATCCTTCTCTGACACCCCTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPRKPSGVLAPF*PNLSFSDTPPS Trigger: GGAGGGAGGGGTGTCAGAGAAGGATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR GCA 72 bp | AAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTaGACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KDGRLQLQSKRA*TPGTLCKKQAL Trigger: CAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR GCA 72 bp | CAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTaGAATCCAAGAGGGCCTGCACTCCAGGGACTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QCPSTSKMGDCS*NPRGPALQGLF Trigger: AAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTGAGGTAGACGGGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | AAGCCCCAAGTGCTTTGCCTTTCTTGGTACCCACCATaGTGGCTCCCTTGGTTGGGAGGCCAGAAACGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KPQVLCLSWYPP*WLPWLGGQKRV Trigger: GACCCGTTTCTGGCCTCCCAACCAAGGGAGCCATCATGGTGGGTACCAAGAAAGGCAAAGCACTTGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | GAGGCCAGAACTCTTTCAAGGTATGGAGATGAATACTaGGCTGCCATCTGGCCCCACCCTCAGACCCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EARTLSRYGDEY*AAIWPHPQTRE Trigger: TTCCCGGGTCTGAGGGTGGGGCCAGATGGCAGCCCAGTATTCATCTCCATACCTTGAAAGAGTTCTGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | CCTCAAATTCAGGGTCCTGGAGGGTTCTGTGCTAAGTaGCCAGAGGACACTGTTGCCCAGGAAACCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQIQGPGGFCAK*PEDTVAQETQW Trigger: CCACTGGGTTTCCTGGGCAACAGTGTCCTCTGGCCACTTAGCACAGAACCCTCCAGGACCCTGAATTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | CTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCATaGGGCCACACCCATAGGAATCACAGACTATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LLESLARCDCPP*GHTHRNHRLWI Trigger: AATCCATAGTCTGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATGACCCGGGAACACAGTaGCTGGCTGGAAGCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GGEAVCARRPRQKWSGKNDPGTQ*LAGSQL Trigger: GAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTC...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | GGGACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTaGGGAAAAGCTACAGCACGCCAGCCCATCGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GTSFLSVCSTAC*GKATARQPIAI Trigger: GATGGCGATGGGCTGGCGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | TCGGTGAGGACTGGGAGAGAAACACCTCTGCCCAGGTaGATGGGATTCTTAAGAGAGCTGCCAATCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVRTGRETPLPR*MGFLRELPISQ Trigger: CTGGGAGATTGGCAGCTCTCTTAAGAATCCCATCCACCTGGGCAGAGGTGTTTCTCTCCCAGTCCTCACCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | GAGGGAGCAAGATTGGATGGATGTGAGCCCAATCCCTaGGTACTAAGTCTGCTGGGAAAACGTCAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGARLDGCEPNP*VLSLLGKRQPG Trigger: CCCTGGCTGACGTTTTCCCAGCAGACTTAGTACCCAGGGATTGGGCTCACATCCATCCAATCTTGCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | AAGTGGCCAGAGGACACTGTTGCCCAGGAAACCCAGTaGTGTGCTTGCTCCCTTCTGCCCAAACCTATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KWPEDTVAQETQ*CACSLLPKPIL Trigger: AAGGATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGTGTCCTCTGGCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | GGGTTTGGGATGGACTCGGCTCTATGGAGGCATGTGTaGGGGACATCCTTCTTAAGTGTTTGCTCCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GFGMDSALWRHV*GTSFLSVCSTA Trigger: GGCAGTGGAGCAAACACTTAAGAAGGATGTCCCTCACACATGCCTCCATAGAGCCGAGTCCATCCCAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | GAGAACAAGACATTCAGGTACCAGTTGGCCAAGAACTaGGGCCTGAGGCCACAGCTCACTCAGTACCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ENKTFRYQLAKN*GLRPQLTQYLC Trigger: GCACAGGTACTGAGTGAGCTGTGGCCTCAGGCCTCAGTTCTTGGCCAACTGGTACCTGAATGTCTTGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | CTCTCCCAAGGCCAAGCTCAGTTTCTGGACCCAGAATaGAAGAGGATGAGCCAAGTCCTTCCCTCCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSQGQAQFLDPE*KRMSQVLPSLE Trigger: CTCCAAGGAGGGAAGGACTTGGCTCATCCTCTTTCATTCTGGGTCCAGAAACTGAGCTTGGCCTTGGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | GGTGGAGGGGTAAGAGGGTATAGGGGAGAGCAAAGTTaGTGTCAGAGCTTTGAAGGGACAGGACAAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGGVRGYRGEQS*CQSFEGTGQRA Trigger: AGCCCTTTGTCCTGTCCCTTCAAAGCTCTGACACCAACTTTGCTCTCCCCTATACCCTCTTACCCCTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGACCATGATGGCTCCCTaGGTTGGGAGGCCAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: DILLKCLLHCLLRKSYSTTMMAP*VGRPET Trigger: CGTTTCTGGCCTCCCAACCAAGGGAGCCATCATGGT...CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | TTCAACTCGCTGGACAGGAAGAAGTGGAGGGTCTGGTaGGAACGGATCTCCTGCCACTGGAAATGGGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: FNSLDRKKWRVW*ERISCHWKWVS Trigger: AGATACCCATTTCCAGTGGCAGGAGATCCGTTCTCACCAGACCCTCCACTTCTTCCTGTCCAGCGAGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | CTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTaGGTGACCCAGTGCCCGTCTACCTCAAAGATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIQTLISQLSSG*VTQCPSTSKMG Trigger: GCCCATCTTTGAGGTAGACGGGCACTGGGTCACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR GCA 72 bp | TGTGTGAGGGACATCCTTCTTAAGTGTTTGCTCCACTaGCTGCTGAGGAAAAGCTACAGCACGCCAGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVRDILLKCLLH*LLRKSYSTPAH Trigger: ATGGGCTGGCGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTCCCTCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | TTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTaGTGCACCCAATTTGACAGAGGCCTGTCTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRLEFHDRKATV*CTQFDRGLSSP Trigger: GGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | TGGCACAGCCAGGAGGAAGAGGGAAAGCCAAAAAGATaGAGTTCTGCTGGTGAAGGCAAAGCAAGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WHSQEEEGKPKR*SSAGEGKARSR Trigger: TCTGCTTCTTGCTTTGCCTTCACCAGCAGAACTCCATCTTTTTGGCTTTCCCTCTTCCTCCTGGCTGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTAAAGCCCCAAGTGCTTaGCCTTTCTTGGTACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSKAPSA*PFLVPT Trigger: GGTGGGTACCAAGAAAGGCAAAGCACTTGGGGCTTT...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR TCA 72 bp | AACGGGTCCCACAACATACTAACAGTCAAGACTCGATaGAAGCCTGGAAGGGAAATCTCGAGTGTGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: NGSHNILTVKTR*KPGREISSVHG Trigger: CCCATGCACACTCGAGATTTCCCTTCCAGGCTTTCATCGAGTCTTGACTGTTAGTATGTTGTGGGACCCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | CCACAACATACTAACAGTCAAGACTCGATGAAAGCCTaGAAGGGAAATCTCGAGTGTGCATGGGAAAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQHTNSQDSMKA*KGNLECAWERG Trigger: CCCCCTTTCCCATGCACACTCGAGATTTCCCTTCCAGGCTTTCATCGAGTCTTGACTGTTAGTATGTTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAATAACATCCTTCTTAAGTGTTaGCTCCACTGCCTGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EAVCARRPRQKWSGKNNNILLKC*LHCLLR Trigger: CCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGAT...GTTATTATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| 3UTR CCA 72 bp | ATAGGAATCACAGACTATGGATTCATGAGAGGATCTTaGCTGACTAATTCAAACTCTTATCTCCCAACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IGITDYGFMRGS*LTNSNSYLPTL Trigger: GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCCATAGTCTGTGATTCCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCACGCCAGCCCATCGCCATCCCTCCAGGGCTAGTCTCAGTCTACCAGCCACGCCGCCCACGCTACTaGCCGAGCCCGGTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TARQPIAIPPGLVSVYQPRRPRY*PSPVPP Trigger: TGGAGGGACCGGGCTCGGCCAGTAGCGTGGGCGGCG...TGGCTGGTAGACTGAGACTAGCCCTGGAGGGATGGCGATGGGCTGGCGTGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATCTCCACGGCCATGGCGGTGCAGTaGCCGGTGGCTGTGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGWKPTLLLFTKPPPISTAMAVQ*PVAVAQ Trigger: CTGGGCCACAGCCACCGGTCACTGCACCGCCATGGC...CGTGGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACTGCGCCACAGGCAGCTaGGCCGGGAGCCGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPHLSPRPWHPHNRASHCATGS*AGSRRG Trigger: GCCTCTACGGCTCCCGGCGCAGCTGCCTGTGGCGCA...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR TCA 90 bp | CCCGGGAACACAGTTGCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCAGCGGCCAGGACAGCGTaGGCAGGGCTGCCGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGNTVAGWKPTLLLFTKPAARTA*AGLPPR Trigger: TCTGGGCGGCAGCCCTGCTCACGCTGTCCTGGCCGC...TGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTGCCATGGGCTCCTCTaGGACCCCGGAGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRCHGLL*DPGAAT Trigger: GGTGGCGGCTCCGGGGTCCCAGAGGAGCCCATGGCA...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTGGGCAGCCCGCGGGCTaGCGCAGATACTCAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPHLSPRPWHPHNRAGQPAG*RRYSAR Trigger: GCGCGCTGAGTATCTGCGCCAGCCCGCGGGCTGCCC...AGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAGCTTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCCTGCTGACCGCTCGCTaGCAGTGCTCGCAGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGLLTAR*QCSQLR Trigger: GCGGAGCTGCGAGCACTGTCAGCGAGCGGTCAGCAG...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATCTCCACGGGGACAGGAGCCATGGCGGTaGAGTGACCGGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSQLCCSSPNHRPSPRGQEPWR*SDRWLW Trigger: CCACAGCCACCGGTCACTGCACCGCCATGGCTCCTG...TCCCCGTGGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGCCCAGGTGGATGGGATTCTTAAGAGAGCTGCCAATCTCCCAGCCTCTCTGGTAGGGCGGCGGTaGCCCGGCCTCCTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSAQVDGILKRAANLPASLVGRR*PGLLLV Trigger: GACGAGGAGGAGGCCGGGCCACCGCCGCCCTACCAG...AGAGGCTGGGAGATTGGCAGCTCTCTTAAGAATCCCATCCACCTGGGCAGAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGCTCTGTCCACTTGCTCACTCACTCACCCCTGGCGGGCTTTAATGAGGACGCGGCAGACGATGTGTaGGCGGGGGCAGCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSVHLLTHSPLAGFNEDAADDV*AGAAAR Trigger: ACGAGCTGCTGCCCCCGCTCACACATCGTCTGCCGC...GTCCTCATTAAAGCCCGCCAGGGGTGAGTGAGTGAGCAAGTGGACAGAGCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAGCAAAGTTGGTGTCAGAGCTTTGAAGGGACAGGACAAAGGGCTGGTGGCAGCAGCTCGTCGCTaGGACTCAGGCCGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GESKVGVRALKGQDKGLVAAARR*DSGRRP Trigger: TGGGCGGCGGCCTGAGTCCCAGCGACGAGCTGCTGC...CACCAGCCCTTTGTCCTGTCCCTTCAAAGCTCTGACACCAACTTTGCTCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTCTGTCCACTTGCTCACTCACTCACCCCTGGCGGGCTTTAATGAGGACCGGTGCAGTGACCGGTaGCTGTGGCCCAGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSVHLLTHSPLAGFNEDRCSDR*LWPRHP Trigger: GGGGTGTCTGGGCCACAGCCACCGGTCACTGCACCG...GTCCTCATTAAAGCCCGCCAGGGGTGAGTGAGTGAGCAAGTGGACAGAGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCTCCACGCAGGAGCCATaGCGGTGCAGTGACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGSTQEP*RCSDRW Trigger: CCACCGGTCACTGCACCGCCATGGCTCCTGCGTGGA...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATCTCCACGAGATGGACGAGCTGCTaGCCGCTCGCTGACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGWKPTLLLFTKPPPISTRWTSC*PLADSA Trigger: AGCACTGTCAGCGAGCGGTCAGCAGCTCGTCCATCT...CGTGGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGAAGACCTAGAGCTTCAACTCGCTGGACAGGAAGAAGTGGAGGGTCTGATGCAAGGGGTGGCCTaGTGCATGCGGCCCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSEDLELQLAGQEEVEGLMQGVA*CMRPTR Trigger: GCGCGTGGGCCGCATGCAGCAGGCCACCCCTTGCAT...CAGACCCTCCACTTCTTCCTGTCCAGCGAGTTGAAGCTCTAGGTCTTCAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATCACTCCCGCTCCGGCTaGGCCACAGGCAGCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEAVCARRPRQKWSGKNHSRSG*ATGSCA Trigger: GGCGCAGCTGCCTGTGGCGCAGCCGGAGCGGGAGTG...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTGTCACTGTGGTGACGTaGCACCAGGCCACTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPHLSPRPWHPHNRAVTVVT*HQATAP Trigger: GGGGGCAGTGGCCTGGTGCCACGTCACCACAGTGAC...AGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAGCTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCAGCTCGTGGCGGGCTTaGCAGTGCCAACACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGSSWRA*QCQHST Trigger: GGTGGAGTGTTGGCACTGCCAAGCCCGCCACGAGCT...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CCCGGGAACACAGTTGCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCATCCCGCATGCTGGCCTaGCTCGACAGACGCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGNTVAGWKPTLLLFTKPSRMLA*LDRRVC Trigger: GCAGACGCGTCTGTCGAGCCAGGCCAGCATGCGGGA...TGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 72 bp | TGCCATCTGGCCCCACCCTCAGACCCGGGAACACAGTaGCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CHLAPPSDPGTQ*LAGSQLCCSSP Trigger: TGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGCAACTGTGTTCCCGGGTCTGAGGGTGGGGCCAGATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | TGTACAGGGAAGCAGTCTCAGATCACTGAGGTCTTGTCTGAGAGTGCCCCTCACCTCGACAGACGCGTCTaGTCCGTGGGGCAGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGKQSQITEVLSESAPHLDRRV*SVGQLA Trigger: GGCGAGCTGCCCCACGGAGCAGACGCGTCTGTCGAG...GTGAGGGGCACTCTCAGACAAGACCTCAGTGATCTGAGACTGCTTCCCTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCCACCCCTCCTGCCGATaGACGATGAGGACAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGHPSCR*TMRTGK Trigger: CTTCCCTGTCCTCATCGTCCATCGGCAGGAGGGGTG...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGGGCTGTCGTGGTACATaGGGCTATTGCCCTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRGCRGT*GYCPGR Trigger: CCTACCAGGGCAATAGCCTCATGTACCACGACAGCC...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGAGCCGTAGAGGCGGCTaGGCGAGAAGCGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DILLKCLLHCLLRKSYSTSRRGG*ARSGCP Trigger: GGGGCAGCCGCTTCTCGCTCAGCCGCCTCTACGGCT...CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | AGAAAGCTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTGGCCTTCCACCAGATaGAAGGGGTGGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKLSPHLSPRPWHPHNRAWPSTR*KGWPAA Trigger: TGCAGCAGGCCACCCCTTGCATCTGGTGGAAGGCCA...AGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAGCTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | TGTACAGGGAAGCAGTCTCAGATCACTGAGGTCTTGTCTGAGAGTGCCCCTCACAGTGCGCATACGCCGTaGGGTACTCGGCCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: CTGKQSQITEVLSESAPHSAHTP*GTRPAR Trigger: GCGTGCTGGCCGAGTACCGCACGGCGTATGCGCACT...GTGAGGGGCACTCTCAGACAAGACCTCAGTGATCTGAGACTGCTTCCCTGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTTGGTGAAAGAGGGCTaGATGGGCCGCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRLVKEG*MGRCSS Trigger: AGAGGAGCAGCGGCCCATCCAGCCCTCTTTCACCAA...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CAAGTGAAACAAACAACAGTGCTGAGTGTGGCTTTCCCAGCGGCGGCGGGAGGCGAGCAGGGGCTGTCGTaGTACATGAGGCTATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVKQTTVLSVAFPAAAGGEQGLS*YMRLLP Trigger: GGGCAATAGCCTCATGTACCACGACAGCCCCTGCTC...GCCTCCCGCCGCCGCTGGGAAAGCCACACTCAGCACTGTTGTTTGTTTCACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTGTAGACGTAGCCGTTaGAGCAGGGGCTGTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLAHPTSPYPQDIQSSRCRRSR*SRGCRG Trigger: ACCACGACAGCCCCTGCTCCAACGGCTACGTCTACA...CCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTAGGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | CTGTGCCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTAGTGACCGGTGGCTGTaGCCCAGACACCCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLTPSDSSRVQTCRCEGSDRWL*PRHPSC Trigger: GCAGGAGGGGTGTCTGGGCCACAGCCACCGGTCACT...ACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | ACTGTTGCCCAGGAAACCCAGTGGTGTGCTTGCTCCCTTCTGCCCAAACCTATCCCCAGACACCCCTCCTaGCGATGGACGATGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TVAQETQWCACSLLPKPIPRHPS*RWTMRT Trigger: TGTCCTCATCGTCCATCGGCAGGAGGGGTGTCTGGG...GATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | CCCTCTGAAGACCTAGAGCTTCAACTCGCTGGACAGGAAGAAGTGGAGGGTCTGGGCAGAGAGATTTGGTaGAAGAGGGCTGGATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSEDLELQLAGQEEVEGLGREIW*KRAGWA Trigger: GGCCCATCCAGCCCTCTTTCACCAAATCTCTCTGCC...CAGACCCTCCACTTCTTCCTGTCCAGCGAGTTGAAGCTCTAGGTCTTCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GACATCCTTCTTAAGTGTTTGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACGCCAGGCAGCCGTACATaGGCAGGGAGAGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DILLKCLLHCLLRKSYSTPGSRT*AGRAGG Trigger: GCCTCCTGCTCTCCCTGCTCATGTACGGCTGCCTGG...CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | ACTGTTGCCCAGGAAACCCAGTGGTGTGCTTGCTCCCTTCTGCCCAAACCTATCTCCACGTTCTTGAGATaGATGCCCTCTCGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVAQETQWCACSLLPKPISTFLR*MPSRAS Trigger: GGAGGCGCGAGAGGGCATGCATCTCAAGAACGTGGA...GATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 72 bp | CTGTGTACAGGGAAGCAGTCTCAGATCACTGAGGTCTaGTCTGAGAGTGCCCCTCACCTCCTGCCTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCTGKQSQITEV*SESAPHLLPSL Trigger: GAGGGAAGGCAGGAGGTGAGGGGCACTCTCAGACAAGACCTCAGTGATCTGAGACTGCTTCCCTGTACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | GAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAATAACCAGCGTGAGCAGGGCTaGCGCCCAGAAGGCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: EAVCARRPRQKWSGKNNNQREQG*RPEGRR Trigger: TCGTCGGCCTTCTGGGCGGCAGCCCTGCTCACGCTG...GTTATTATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | GGAGGTGAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAAGAAGCGCGCGCGCTaGCACAGGTACGCGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGEAVCARRPRQKWSGKNKKRAR*HRYAFS Trigger: TGAGAACGCGTACCTGTGCCAGCGCGCGCGCTTCTT...ATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTCACCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 72 bp | GCTTTGCCTTTCTTGGTACCCACCATGATGGCTCCCTaGGTTGGGAGGCCAGAAACGGGTCCCACAACATAC | + |
|
Preference number: 4 (lower is better) Translates to: ALPFLVPTMMAP*VGRPETGPTTY Trigger: GTATGTTGTGGGACCCGTTTCTGGCCTCCCAACCAAGGGAGCCATCATGGTGGGTACCAAGAAAGGCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 72 bp | AGAGGACACTGTTGCCCAGGAAACCCAGTGGTGTGCTaGCTCCCTTCTGCCCAAACCTATCCTTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RGHCCPGNPVVC*LPSAQTYPSLT Trigger: TGTCAGAGAAGGATAGGTTTGGGCAGAAGGGAGCAAGCACACCACTGGGTTTCCTGGGCAACAGTGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCGGCGCGTCACTGTGGTaGCGTGGCACCAGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLGASLW*RGTRPL Trigger: CAGTGGCCTGGTGCCACGTCACCACAGTGACGCGCC...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CCA 90 bp | GAGGCTGTCTGTGCAAGGAGACCTAGGCAGAAATGGTCAGGCAAAAATAATAACACCAGATGCAAGGGGTaGCCTGCTGCATGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAVCARRPRQKWSGKNNNTRCKG*PAACGP Trigger: TGGGCCGCATGCAGCAGGCCACCCCTTGCATCTGGT...GTTATTATTTTTGCCTGACCATTTCTGCCTAGGTCTCCTTGCACAGACAGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCCGCCACGTGTGTGTTaGCCCGCTCGTGGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLPPRVC*PARGRP Trigger: AGGTCTACCACGAGCGGGTCAACACACACGTGGCGG...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTCTGGGTACCAGCTGCTaGTTAGAACGGATGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSWLTNSNSYLPTLLGLSLGTSC*LERMCH Trigger: GTGGCACATCCGTTCTAATCAGCAGCTGGTACCCAG...ACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR TCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCCTGCCGATGGACGATaGGGACAGGGAAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLPADGR*GQGSRG Trigger: CCCTCTGCTTCCCTGTCCTCATCGTCCATCGGCAGG...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR GCA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCACATCCACACGGTGCTaGAGCTCGTGGCGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLTSTRC*SSWRAW Trigger: CCAAGCCCGCCACGAGCTGCAGCACCGTGTGGATGT...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| 3UTR CAA 72 bp | ATGGAGGCATGTGTGAGGGACATCCTTCTTAAGTGTTaGCTCCACTGCCTGCTGAGGAAAAGCTACAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: MEACVRDILLKC*LHCLLRKSYST Trigger: CGTGCTGTAGCTTTTCCTCAGCAGGCAGTGGAGCAAACACTTAAGAAGGATGTCCCTCACACATGCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 90 bp | TCACGCCCGCCGCGCCCGGGCCACCAACCCCTCCGTAGCGACACCTaGGCACGTAGCTACCCCCTGGCCCGCCGCAGCGTGAGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRPPRPGHQPLRSDT*ARSYPLARRSVSPA Trigger: AGCTGGGCTCACGCTGCGGCGGGCCAGGGGGTAGCTACGTGCCCAGGTGTCGCTACGGAGGGGTTGGTGGCCCGGGCGCGGCGGGCGTGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 90 bp | ACGCCGTGCGGTACTCGGCCAGCACGCGCAGCGGCCAGGACAGCGTaGGCAGGGCTGCCGCCCAGAAGGCCGACGAGCAGGCGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPCGTRPARAAARTA*AGLPPRRPTSRRTR Trigger: CCTGGTACGCCTGCTCGTCGGCCTTCTGGGCGGCAGCCCTGCTCACGCTGTCCTGGCCGCTGCGCGTGCTGGCCGAGTACCGCACGGCGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 90 bp | CCTGGCTCGACAGACGCGTCTGCTCCGTGGGGCAGCTCGCCTCGTTaGCACTCCCGCTCCGGCTGCGCCACAGGCAGCTGCGCCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSTDASAPWGSSPR*HSRSGCATGSCAGS Trigger: GCTCCCGGCGCAGCTGCCTGTGGCGCAGCCGGAGCGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGTCGAGCCAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS GCA 90 bp | TCCTCCTCGTTGTCCCGCATGCTGGCCTGGCTCGACAGACGCGTCTaGTCCGTGGGGCAGCTCGCCTCGTTGACACTCCCGCTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSRMLAWLDRRV*SVGQLASLTLPLRL Trigger: CAGCCGGAGCGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGTCGAGCCAGGCCAGCATGCGGGACAACGAGGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 90 bp | GGGGCAGCAGCTCGTCGCTGGGACTCAGGCCGCCGCCCACGCTACTaGCCGAGCCCGGTCCCTCCAGACCAAAGAGCTTTTCCACGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GAAARRWDSGRRPRY*PSPVPPDQRAFPRD Trigger: ATCACGTGGAAAAGCTCTTTGGTCTGGAGGGACCGGGCTCGGCCAGTAGCGTGGGCGGCGGCCTGAGTCCCAGCGACGAGCTGCTGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 90 bp | TGGCGCAGATACTCAGCGCGCTGCGCGAGAAGATGGACGAGCTGCTaGCCGCTCGCTGACAGTGCTCGCAGCTCCGCCAGTGCGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WRRYSARCARRWTSC*PLADSARSSASAGS Trigger: TGACCCCGCACTGGCGGAGCTGCGAGCACTGTCAGCGAGCGGTCAGCAGCTCGTCCATCTTCTCGCGCAGCGCGCTGAGTATCTGCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 90 bp | GAGGTCTCCACGCAGGAGCCATGGCGGTGCAGTGACCGGTGGCTGTaGCCCAGACACCCCTCCTGCCGATGGACGATGAGGACAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EVSTQEPWRCSDRWL*PRHPSCRWTMRTGK Trigger: CTTCCCTGTCCTCATCGTCCATCGGCAGGAGGGGTGTCTGGGCCACAGCCACCGGTCACTGCACCGCCATGGCTCCTGCGTGGAGACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 90 bp | GTAGCGACACCTGGGCACGTAGCTACCCCCTGGCCCGCCGCAGCGTaGGCCCAGCTCGACCAGGTCCATAAGCAACACCTCCGAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VATPGHVATPWPAAA*AQLDQVHKQHLRVA Trigger: AGCTACTCGGAGGTGTTGCTTATGGACCTGGTCGAGCTGGGCTCACGCTGCGGCGGGCCAGGGGGTAGCTACGTGCCCAGGTGTCGCTAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACCAGCTCGTGGCGGGCTaGGCAGTGCCAACACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPHLSPRPWHPHNRASHQLVAG*AVPTLH Trigger: GTGGAGTGTTGGCACTGCCAAGCCCGCCACGAGCTG...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CAA 90 bp | GCTGGCTGGAAGCCAACTCTGCTGCTCTTCACCAAACCACCGCCCATCTCCACGTCCTCGTCCTCCTCGTaGTCCCGCATGCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGWKPTLLLFTKPPPISTSSSSS*SRMLAW Trigger: CCAGGCCAGCATGCGGGACAACGAGGAGGACGAGGA...CGTGGAGATGGGCGGTGGTTTGGTGAAGAGCAGCAGAGTTGGCTTCCAGCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCCCATTTGAGCCCTAGACCATGGCATCCCCACAACAGGGCTTCCCACCGAAAGTCCACGTTCTaGAGATGCATGCCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPHLSPRPWHPHNRASHRKSTF*RCMPSR Trigger: GCGAGAGGGCATGCATCTCAAGAACGTGGACTTTCG...GTGGGAAGCCCTGTTGTGGGGATGCCATGGTCTAGGGCTCAAATGGGGGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS-3UTR CAA 90 bp | GGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCGTGCTGTCCACCGTGTaGACCCGCGGCAGACGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GFMRGSWLTNSNSYLPTLVLSTV*TRGRRC Trigger: ACATCGTCTGCCGCGGGTCAACACGGTGGACAGCAC...GAGAGTTGGGAGATAAGAGTTTGAATTAGTCAGCCAAGATCCTCTCATGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS GCA 72 bp | CCGCTGCTCCTCTCGGGCGGGGCCCTCGTCCGCCGATaGCATGGGCTCCTCTGGGACCCCGGAGCCGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PLLLSGGALVRR*HGLLWDPGAAT Trigger: GGTGGCGGCTCCGGGGTCCCAGAGGAGCCCATGGCATCGGCGGACGAGGGCCCCGCCCGAGAGGAGCAGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 72 bp | GCCACAGGCAGCTGCGCCGGGAGCCGTAGAGGCGGCTaGGCGAGAAGCGGCTGCCCCCACACCCCGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ATGSCAGSRRGG*ARSGCPHTPRS Trigger: CGAGCGCGGGGTGTGGGGGCAGCCGCTTCTCGCTCAGCCGCCTCTACGGCTCCCGGCGCAGCTGCCTGTGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | CCGCGCCCGGGCCACCAACCCCTCCGTAGCGACACCTaGGCACGTAGCTACCCCCTGGCCCGCCGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRPGHQPLRSDT*ARSYPLARRSV Trigger: CACGCTGCGGCGGGCCAGGGGGTAGCTACGTGCCCAGGTGTCGCTACGGAGGGGTTGGTGGCCCGGGCGCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
||
| CDS TCA 72 bp | GGTACTCGGCCAGCACGCGCAGCGGCCAGGACAGCGTaGGCAGGGCTGCCGCCCAGAAGGCCGACGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTRPARAAARTA*AGLPPRRPTSR Trigger: CCTGCTCGTCGGCCTTCTGGGCGGCAGCCCTGCTCACGCTGTCCTGGCCGCTGCGCGTGCTGGCCGAGTACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CAA 90 bp | GCCTGGCTCGACAGACGCGTCTGCTCCGTGGGGCAGCTCGCCTCGTaGACACTCCCGCTCCGGCTGCGCCACAGGCAGCTGCGCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWLDRRVCSVGQLAS*TLPLRLRHRQLRRE Trigger: CTCCCGGCGCAGCTGCCTGTGGCGCAGCCGGAGCGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGTCGAGCCAGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 72 bp | ACAGACGCGTCTGCTCCGTGGGGCAGCTCGCCTCGTTaGCACTCCCGCTCCGGCTGCGCCACAGGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TDASAPWGSSPR*HSRSGCATGSC Trigger: GCAGCTGCCTGTGGCGCAGCCGGAGCGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CAA 72 bp | GACAGACGCGTCTGCTCCGTGGGGCAGCTCGCCTCGTaGACACTCCCGCTCCGGCTGCGCCACAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: DRRVCSVGQLAS*TLPLRLRHRQL Trigger: CAGCTGCCTGTGGCGCAGCCGGAGCGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | CCTCCTCGTCCTCGTCCTCCTCGTTGTCCCGCATGCTaGCCTGGCTCGACAGACGCGTCTGCTCCGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PPRPRPPRCPAC*PGSTDASAPWG Trigger: GCCCCACGGAGCAGACGCGTCTGTCGAGCCAGGCCAGCATGCGGGACAACGAGGAGGACGAGGACGAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 72 bp | CCTGGGCACGTAGCTACCCCCTGGCCCGCCGCAGCGTaGGCCCAGCTCGACCAGGTCCATAAGCAACACCTC | + |
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Preference number: 6 (lower is better) Translates to: PGHVATPWPAAA*AQLDQVHKQHL Trigger: GAGGTGTTGCTTATGGACCTGGTCGAGCTGGGCTCACGCTGCGGCGGGCCAGGGGGTAGCTACGTGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS GCA 72 bp | TTGTCCCGCATGCTGGCCTGGCTCGACAGACGCGTCTaGTCCGTGGGGCAGCTCGCCTCGTTGACACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSRMLAWLDRRV*SVGQLASLTLP Trigger: CGGGAGTGTCAACGAGGCGAGCTGCCCCACGGAGCAGACGCGTCTGTCGAGCCAGGCCAGCATGCGGGACAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | GCGCTGCTGAAGGTGAGGCGCGTCACTGTGGTGACGTaGCACCAGGCCACTGCCCCCAGGCAGCCGTACATG | + |
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Preference number: 6 (lower is better) Translates to: ALLKVRRVTVVT*HQATAPRQPYM Trigger: CATGTACGGCTGCCTGGGGGCAGTGGCCTGGTGCCACGTCACCACAGTGACGCGCCTCACCTTCAGCAGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | GCTCGTCGCTGGGACTCAGGCCGCCGCCCACGCTACTaGCCGAGCCCGGTCCCTCCAGACCAAAGAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ARRWDSGRRPRY*PSPVPPDQRAF Trigger: AAAAGCTCTTTGGTCTGGAGGGACCGGGCTCGGCCAGTAGCGTGGGCGGCGGCCTGAGTCCCAGCGACGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | TCGTCCTCGTCCTCCTCGTTGTCCCGCATGCTGGCCTaGCTCGACAGACGCGTCTGCTCCGTGGGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSLSRMLA*LDRRVCSVGQL Trigger: GAGCTGCCCCACGGAGCAGACGCGTCTGTCGAGCCAGGCCAGCATGCGGGACAACGAGGAGGACGAGGACGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CCA 72 bp | ACGCAGGAGCCATGGCGGTGCAGTGACCGGTGGCTGTaGCCCAGACACCCCTCCTGCCGATGGACGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TQEPWRCSDRWL*PRHPSCRWTMR Trigger: CCTCATCGTCCATCGGCAGGAGGGGTGTCTGGGCCACAGCCACCGGTCACTGCACCGCCATGGCTCCTGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 72 bp | CAAGGGGTGGCCTGCTGCATGCGGCCCACGCGCTCCTaGACGCTACTCACATCCACACGGTGCTGCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: QGVACCMRPTRS*TLLTSTRCCSS Trigger: CGAGCTGCAGCACCGTGTGGATGTGAGTAGCGTTCAGGAGCGCGTGGGCCGCATGCAGCAGGCCACCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS GCA 72 bp | TGCAGTGACCGGTGGCTGTGGCCCAGACACCCCTCCTaGCGATGGACGATGAGGACAGGGAAGCAGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CSDRWLWPRHPS*RWTMRTGKQRA Trigger: CGCCCTCTGCTTCCCTGTCCTCATCGTCCATCGGCAGGAGGGGTGTCTGGGCCACAGCCACCGGTCACTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS TCA 72 bp | TACTCAGCGCGCTGCGCGAGAAGATGGACGAGCTGCTaGCCGCTCGCTGACAGTGCTCGCAGCTCCGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: YSARCARRWTSC*PLADSARSSAS Trigger: ACTGGCGGAGCTGCGAGCACTGTCAGCGAGCGGTCAGCAGCTCGTCCATCTTCTCGCGCAGCGCGCTGAGTA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS GCA 72 bp | CAAAGAGCTTTTCCACGTGATAGTGCGCATACGCCGTaGGGTACTCGGCCAGCACGCGCAGCGGCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: QRAFPRDSAHTP*GTRPARAAART Trigger: TGTCCTGGCCGCTGCGCGTGCTGGCCGAGTACCGCACGGCGTATGCGCACTATCACGTGGAAAAGCTCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CAA 72 bp | ACTCACATCCACACGGTGCTGCAGCTCGTGGCGGGCTaGGCAGTGCCAACACTCCACCAGGTAGACCGCGTA | + |
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Preference number: 6 (lower is better) Translates to: THIHTVLQLVAG*AVPTLHQVDRV Trigger: TACGCGGTCTACCTGGTGGAGTGTTGGCACTGCCAAGCCCGCCACGAGCTGCAGCACCGTGTGGATGTGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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| CDS CAA 90 bp | CTGAACGCTACTCACATCCACACGGTGCTGCAGCTCGTGGCGGGCTaGGCAGTGCCAACACTCCACCAGGTAGACCGCGTAGAGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: LNATHIHTVLQLVAG*AVPTLHQVDRVEHQ Trigger: CTGATGCTCTACGCGGTCTACCTGGTGGAGTGTTGGCACTGCCAAGCCCGCCACGAGCTGCAGCACCGTGTGGATGTGAGTAGCGTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180252.3 |
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