Pregenerated sensors for TMEM150A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055912Ensembl transcript IDs: ENSMUST00000069695.9, ENSMUST00000132243.3, ENSMUST00000206064.2, ENSMUST00000206531.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACTACTCTGGTATGAGGGGACAGGACAAGCAGCAGAGGCAGCTGTaGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTGGATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: YYSGMRGQDKQQRQL*RPCPSMAQVGVGWP Trigger: TGGCCATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCACAGCTGCCTCTGCTGCTTGTCCTGTCCCCTCATACCAGAGTAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR CCA 90 bp | GAGGCAGCTGTGGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTaGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAA | + |
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Preference number: 1 (lower is better) Translates to: EAAVEALSLYGTGGC*MATSPEVRKPRSQQ Trigger: TTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCACAGCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR CCA 90 bp | CAAAATAAATGCAAAGAAGGTAGAGGGTGCGGGTGTTTTGGAGGCTaGGCCAGCCACCCTCCAGACCTCAGATCATGGCAATACTCTCGG | + |
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Preference number: 1 (lower is better) Translates to: QNKCKEGRGCGCFGG*ASHPPDLRSWQYSR Trigger: CCGAGAGTATTGCCATGATCTGAGGTCTGGAGGGTGGCTGGCCCAGCCTCCAAAACACCCGCACCCTCTACCTTCTTTGCATTTATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGGCAGCTGTGGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTGGATGCATCATCCAGACTCGTaGGCCCCTGCCACCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AEAAVEALSLYGTGGCWMHHPDS*APATPA Trigger: GGCTGGGGTGGCAGGGGCTCACGAGTCTGGATGATG...CATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCACAGCTGCCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCACCCTCCAGACCTCAGATCATGGCAATACTCTCGGGAGCACAGTTGAGGGGTGTTTTGGAGGCTaGGCCAGCCACCCTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PATLQTSDHGNTLGSTVEGCFGG*ASHPPD Trigger: GTCTGGAGGGTGGCTGGCCCAGCCTCCAAAACACCC...CTCAACTGTGCTCCCGAGAGTATTGCCATGATCTGAGGTCTGGAGGGTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| 3UTR CAA 90 bp | CCACCCTCCAGACCTCAGATCATGGCAATACTCTCGGGAGCACAGTaGAGGTGGGTAGAGGTGCTGCTGCTCCCAGAGGACTTACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PPSRPQIMAILSGAQ*RWVEVLLLPEDLQA Trigger: GGCCTGTAAGTCCTCTGGGAGCAGCAGCACCTCTACCCACCTCAACTGTGCTCCCGAGAGTATTGCCATGATCTGAGGTCTGGAGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCAAGTGCAGCTGGGTGGGCCTTCCCTTAGGCTAAGGCATGCTCCTCCCAAAGAAGGTAGAGGGTaGGGGTGTTTTGGAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RTQVQLGGPSLRLRHAPPKEGRG*GCFGGW Trigger: CCAGCCTCCAAAACACCCGCACCCTCTACCTTCTTT...GGGAGGAGCATGCCTTAGCCTAAGGGAAGGCCCACCCAGCTGCACTTGGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAAATACTCGTGTGGTTCTGCTGTGTTATTTGCCCTAAAGGAAGTGAGGGGCCATCATCCAGACTCGTaGGCCCCTGCCACCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKYSCGSAVLFALKEVRGHHPDS*APATPA Trigger: GGCTGGGGTGGCAGGGGCTCACGAGTCTGGATGATG...GCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR CCA 90 bp | AACACAGAATACTACTCTGGTATGAGGGGACAGGACAAGCAGCAGAGGCAGCTGGGCCCTGTCCCTCTATaGCACAGGTGGGTGTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NTEYYSGMRGQDKQQRQLGPVPL*HRWVLD Trigger: ATCCAACACCCACCTGTGCCATAGAGGGACAGGGCC...CAGCTGCCTCTGCTGCTTGTCCTGTCCCCTCATACCAGAGTAGTATTCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTTGGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACCAGCAGAGGCAGCTGTaGAGGCCCTGTCCCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: GCWMATSPEVRKPRSQQYQQRQL*RPCPSM Trigger: CATAGAGGGACAGGGCCTCCACAGCTGCCTCTGCTG...GTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR CCA 90 bp | AAAATACTCGTGTGGTTCTGCTGTGTTATTTGCCCTAAAGGAAGTGAGGGGCAGGGGTGTTTTGGAGGCTaGGCCAGCCACCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KILVWFCCVICPKGSEGQGCFGG*ASHPPD Trigger: GTCTGGAGGGTGGCTGGCCCAGCCTCCAAAACACCC...CTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACTCTCTAAAACTTGTTGGAGTAGAAGGCACCTaGAGGGCTGGCTGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TSPEVRKPRSQQYSLKLVGVEGT*RAGWAR Trigger: CCTTGCCCAGCCAGCCCTTCAGGTGCCTTCTACTCC...AACAAGTTTTAGAGAGTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTACTAAAATACTCGTGTGGTTCTGCTGTGTTATTTGCCCTAAAGGAAGTGGAGTAGAAGGCACCTaGAGGGCTGGCTGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: KSTKILVWFCCVICPKGSGVEGT*RAGWAR Trigger: CCTTGCCCAGCCAGCCCTTCAGGTGCCTTCTACTCC...ACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTTAGTACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGAAGCCTAGATCCCAACAATACTCTCTAAAACTTGTTTTTGGTACAAAAAAAGAAGGTAGAGGGTaGGGGTGTTTTGGAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VRKPRSQQYSLKLVFGTKKEGRG*GCFGGW Trigger: CCAGCCTCCAAAACACCCGCACCCTCTACCTTCTTT...TTTTGTACCAAAAACAAGTTTTAGAGAGTATTGTTGGGATCTAGGCTTCCTTAC 42% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR CCA 72 bp | TGCAAAGAAGGTAGAGGGTGCGGGTGTTTTGGAGGCTaGGCCAGCCACCCTCCAGACCTCAGATCATGGCAA | + |
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Preference number: 3 (lower is better) Translates to: CKEGRGCGCFGG*ASHPPDLRSWQ Trigger: TTGCCATGATCTGAGGTCTGGAGGGTGGCTGGCCCAGCCTCCAAAACACCCGCACCCTCTACCTTCTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| 3UTR CCA 72 bp | GTGGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTaGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: VEALSLYGTGGC*MATSPEVRKPR Trigger: TCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| 3UTR GCA 72 bp | AGTACTAAAATACTCGTGTGGTTCTGCTGTGTTATTTaGCCTAAAGGAAGTGAGGGGCAGAGTGAAGAACCC | + |
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Preference number: 3 (lower is better) Translates to: STKILVWFCCVI*PKGSEGQSEEP Trigger: GGGTTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTTAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | GAGGCAGCTGTGGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTGGATGGCCACCGAAGGAGGCAGATaGGGGCCACTGATGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EAAVEALSLYGTGGCWMATEGGR*GPLMRG Trigger: TCCTCTCATCAGTGGCCCTCATCTGCCTCCTTCGGT...GGCCATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCACAGCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| CDS-3UTR GCA 90 bp | GCAGAGGCAGCTGTGGAGGCCCTGTCCCTCTATGGCACAGGTGGGTGTTGGATGGACCACCACGAGGCCTaGAGCGTTGGTGCAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: AEAAVEALSLYGTGGCWMDHHEA*SVGATS Trigger: ACTGGTTGCACCAACGCTGCAGGCCTCGTGGTGGTC...CATCCAACACCCACCTGTGCCATAGAGGGACAGGGCCTCCACAGCTGCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | AGAACCCAAGTGCAGCTGGGTGGGCCTTCCCTTAGGCTAAGGCATGCTCCTCCCGGCCACCAGTGTGTCTaGGGAGATTGTCCCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: RTQVQLGGPSLRLRHAPPGHQCV*GDCPEL Trigger: GAGTTCGGGACAATCTCCTCAGACACACTGGTGGCC...GGGAGGAGCATGCCTTAGCCTAAGGGAAGGCCCACCCAGCTGCACTTGGGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069695.9 |
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| 3UTR CAA 72 bp | AGACCTCAGATCATGGCAATACTCTCGGGAGCACAGTaGAGGTGGGTAGAGGTGCTGCTGCTCCCAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RPQIMAILSGAQ*RWVEVLLLPED Trigger: GTCCTCTGGGAGCAGCAGCACCTCTACCCACCTCAACTGTGCTCCCGAGAGTATTGCCATGATCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | CAAAATAAATGCAAAGAAGGTAGAGGGTGCGGGTGTTTTGGAGGCTGGGCCAGCCAGTCCATATGCCGGTaGTGGAGAAGGCTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QNKCKEGRGCGCFGGWASQSICR*WRRLTG Trigger: GCCTGTCAGCCTTCTCCATCACCGGCATATGGACTG...GCTGGCCCAGCCTCCAAAACACCCGCACCCTCTACCTTCTTTGCATTTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | GGGTGTTGGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACGGTGATGGAGAAGGCTaGCAGGCTGACAGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GCWMATSPEVRKPRSQQYGDGEG*QADRKE Trigger: CTCCTTCCTGTCAGCCTGTCAGCCTTCTCCATCACC...GTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | GGGTGTTGGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACCAGTCCATATGCCGGTaGTGGAGAAGGCTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GCWMATSPEVRKPRSQQYQSICR*WRRLTG Trigger: GCCTGTCAGCCTTCTCCATCACCGGCATATGGACTG...GTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR CCA 90 bp | GAAAATGAGGATATCGAGGACAAACACCCATTCACACAGAGCAGCTCCATGCTGGGACCAGTTCTCCACTaGGCACACGTGGCGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ENEDIEDKHPFTQSSSMLGPVLH*AHVAVH Trigger: ATGAACCGCCACGTGTGCCCAGTGGAGAACTGGTCC...CAGCATGGAGCTGCTCTGTGTGAATGGGTGTTTGTCCTCGATATCCTCATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | AAAATACTCGTGTGGTTCTGCTGTGTTATTTGCCCTAAAGGAAGTGAGGGGCAGGGTGATGGAGAAGGCTaGCAGGCTGACAGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KILVWFCCVICPKGSEGQGDGEG*QADRKE Trigger: CTCCTTCCTGTCAGCCTGTCAGCCTTCTCCATCACC...CTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR TCA 90 bp | GGGTGTTGGATGGCCACTTCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACAGGTGCCATAGAAAATaGGGATATCGAGGACAAACA | + |
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Preference number: 4 (lower is better) Translates to: GCWMATSPEVRKPRSQQYRCHRK*GYRGQT Trigger: TGTTTGTCCTCGATATCCTCATTTTCTATGGCACCT...GTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGAAGTGGCCATCCAACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069695.9 |
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| CDS-3UTR TCA 90 bp | GTAAGGAAGCCTAGATCCCAACAATACTCTCTAAAACTTGTTTTTGGTACAAAAAGAGCAGCCCAGCAGTaGAGGCCACACCAGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VRKPRSQQYSLKLVFGTKRAAQQ*RPHQFR Trigger: TCGGAACTGGTGTGGCCTTCACTGCTGGGCTGCTCT...TTTTGTACCAAAAACAAGTTTTAGAGAGTATTGTTGGGATCTAGGCTTCCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS-3UTR CCA 90 bp | AAAAGTACTAAAATACTCGTGTGGTTCTGCTGTGTTATTTGCCCTAAAGGAAGTGGACCAGTTCTCCACTaGGCACACGTGGCGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSTKILVWFCCVICPKGSGPVLH*AHVAVH Trigger: ATGAACCGCCACGTGTGCCCAGTGGAGAACTGGTCC...ACTTCCTTTAGGGCAAATAACACAGCAGAACCACACGAGTATTTTAGTACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS GCA 90 bp | GCCGACCACCACGAGGCCTGCAGCGTTGGTGCAACCAGTGATGAGTaGAGTGGTATTGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ADHHEACSVGATSDE*SGIDPGVPALFQEL Trigger: CAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGCTGCAGGCCTCGTGGTGGTCGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS GCA 90 bp | AGTGCAGTGGTATTGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTaGCCGTACCGAAGGAGGCAGATGAGGGCCACCATAACAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: SAVVLIQECRLCSRS*PYRRRQMRATITAP Trigger: GGGTGCTGTTATGGTGGCCCTCATCTGCCTCCTTCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000206064.2 ENSMUST00000206531.2 |
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| CDS GCA 90 bp | GCGTTGGTGCAACCAGTGATGAGTGCAGTGGTATTGATCCAGGAGTaGCGGCTCTGTTCCAGGAGCTGCCCGTACCGAAGGAGGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: ALVQPVMSAVVLIQE*RLCSRSCPYRRRQM Trigger: CATCTGCCTCCTTCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS-3UTR CAA 90 bp | AGAACCCAAGTGCAGCTGGGTGGGCCTTCCCTTAGGCTAAGGCATGCTCCTCCCATAACAGCACCCATGTaGCCAATGAGGCTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RTQVQLGGPSLRLRHAPPITAPM*PMRLKR Trigger: CCTCTTCAGCCTCATTGGCAACATGGGTGCTGTTAT...GGGAGGAGCATGCCTTAGCCTAAGGGAAGGCCCACCCAGCTGCACTTGGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069695.9 |
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| CDS-3UTR CAA 90 bp | AACACAGAATACTACTCTGGTATGAGGGGACAGGACAAGCAGCAGAGGCAGCTGGCTCTTAGGGCCCCCTaGTTCAGCAGGGTCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: NTEYYSGMRGQDKQQRQLALRAP*FSRVRR Trigger: TCTCCTGACCCTGCTGAACAAGGGGGCCCTAAGAGC...CAGCTGCCTCTGCTGCTTGTCCTGTCCCCTCATACCAGAGTAGTATTCTGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS TCA 90 bp | TCGAGGACAAACACCCATTCACACAGAGCAGCTCCATGCTGGAGCTaGGAACTCTCGTGGAGGAAGAAGACTCCACTAAGGACCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SRTNTHSHRAAPCWS*ELSWRKKTPLRTRV Trigger: CACCCTGGTCCTTAGTGGAGTCTTCTTCCTCCACGAGAGTTCTCAGCTCCAGCATGGAGCTGCTCTGTGTGAATGGGTGTTTGTCCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069695.9 |
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| CDS GCA 90 bp | AGACTTGGCATGGTCCACCTGAAAATTGCCGACCACCACGAGGCCTaGAGCGTTGGTGCAACCAGTGATGAGTGCAGTGGTATTGATCCA | + |
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Preference number: 5 (lower is better) Translates to: RLGMVHLKIADHHEA*SVGATSDECSGIDP Trigger: TGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGCTGCAGGCCTCGTGGTGGTCGGCAATTTTCAGGTGGACCATGCCAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS-3UTR CAA 90 bp | TCTCCAGAAGTAAGGAAGCCTAGATCCCAACAATACTCTCTAAAACTTGTTTTTGCTCTTAGGGCCCCCTaGTTCAGCAGGGTCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SPEVRKPRSQQYSLKLVFALRAP*FSRVRR Trigger: TCTCCTGACCCTGCTGAACAAGGGGGCCCTAAGAGC...AAAAACAAGTTTTAGAGAGTATTGTTGGGATCTAGGCTTCCTTACTTCTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 |
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| CDS CAA 90 bp | ACGAGGCCTGCAGCGTTGGTGCAACCAGTGATGAGTGCAGTGGTATaGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTGCCCGTACCGA | + |
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Preference number: 6 (lower is better) Translates to: TRPAALVQPVMSAVV*IQECRLCSRSCPYR Trigger: TCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGCTGCAGGCCTCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS GCA 72 bp | GTATTGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTaGCCGTACCGAAGGAGGCAGATGAGGGCCACCATA | + |
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Preference number: 6 (lower is better) Translates to: VLIQECRLCSRS*PYRRRQMRATI Trigger: TATGGTGGCCCTCATCTGCCTCCTTCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000206064.2 ENSMUST00000206531.2 |
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| CDS GCA 72 bp | GTATTGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTaGCCGTACCGAAGGAGGCAGATGAGGGCCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VLIQECRLCSRS*PYRRRQMRATD Trigger: ATCAGTGGCCCTCATCTGCCTCCTTCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| CDS TCA 72 bp | TCTGTTCCAGGAGCTGCCCGTACCGAAGGAGGCAGATaGGGGCCACTGATGAGAGGAACATCATCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVPGAARTEGGR*GPLMRGTSSRV Trigger: CACCCTGGATGATGTTCCTCTCATCAGTGGCCCTCATCTGCCTCCTTCGGTACGGGCAGCTCCTGGAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132243.3 |
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| CDS GCA 72 bp | CAACCAGTGATGAGTGCAGTGGTATTGATCCAGGAGTaGCGGCTCTGTTCCAGGAGCTGCCCGTACCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QPVMSAVVLIQE*RLCSRSCPYRR Trigger: CCTTCGGTACGGGCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206064.2 ENSMUST00000206531.2 |
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| CDS GCA 72 bp | CACGAGGCCTGCAGCGTTGGTGCAACCAGTGATGAGTaGAGTGGTATTGATCCAGGAGTGCCGGCTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: HEACSVGATSDE*SGIDPGVPALF Trigger: GAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGCTGCAGGCCTCGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS CAA 72 bp | GCAGCGTTGGTGCAACCAGTGATGAGTGCAGTGGTATaGATCCAGGAGTGCCGGCTCTGTTCCAGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AALVQPVMSAVV*IQECRLCSRSC Trigger: GCAGCTCCTGGAACAGAGCCGGCACTCCTGGATCAATACCACTGCACTCATCACTGGTTGCACCAACGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS TCA 72 bp | GGCATACACAGTCCATATGCCGGTGATGGAGAAGGCTaGCAGGCTGACAGGAAGGAGGATCCAGGCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: GIHSPYAGDGEG*QADRKEDPGGH Trigger: ATGACCGCCTGGATCCTCCTTCCTGTCAGCCTGTCAGCCTTCTCCATCACCGGCATATGGACTGTGTATGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206064.2 |
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| CDS TCA 72 bp | GTAGGACACAGTCCATATGCCGGTGATGGAGAAGGCTaGCAGGCTGACAGGAAGGAGGATCCAGGCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: VGHSPYAGDGEG*QADRKEDPGGH Trigger: ATGACCGCCTGGATCCTCCTTCCTGTCAGCCTGTCAGCCTTCTCCATCACCGGCATATGGACTGTGTCCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206531.2 |
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| CDS GCA 72 bp | ATGGTCCACCTGAAAATTGCCGACCACCACGAGGCCTaGAGCGTTGGTGCAACCAGTGATGAGTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: MVHLKIADHHEA*SVGATSDECSG Trigger: ACCACTGCACTCATCACTGGTTGCACCAACGCTGCAGGCCTCGTGGTGGTCGGCAATTTTCAGGTGGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS GCA 72 bp | TGTAGTGTAGAGACTTGGCATGGTCCACCTGAAAATTaGCGACCACCACGAGGCCTGCAGCGTTGGTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: CSVETWHGPPEN*RPPRGLQRWCN Trigger: GTTGCACCAACGCTGCAGGCCTCGTGGTGGTCGGCAATTTTCAGGTGGACCATGCCAAGTCTCTACACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206531.2 |
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| CDS CCA 72 bp | AGGAGAGCAGGATTCATTGTAGGACCAGTTCTCCACTaGGCACACGTGGCGGTTCATCACGGCCATGGCATA | + |
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Preference number: 6 (lower is better) Translates to: RRAGFIVGPVLH*AHVAVHHGHGI Trigger: TATGCCATGGCCGTGATGAACCGCCACGTGTGCCCAGTGGAGAACTGGTCCTACAATGAATCCTGCTCTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206064.2 |
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| CDS CAA 90 bp | GATGAGAGGAACATCATCCAGGGTGCAGCAGCTCTTAGGGCCCCCTaGTTCAGCAGGGTCAGGAGAGCAGGATTCATTGTAGGACCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DERNIIQGAAALRAP*FSRVRRAGFIVGPV Trigger: AACTGGTCCTACAATGAATCCTGCTCTCCTGACCCTGCTGAACAAGGGGGCCCTAAGAGCTGCTGCACCCTGGATGATGTTCCTCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206064.2 |
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| CDS CAA 72 bp | AACATCATCCAGGGTGCAGCAGCTCTTAGGGCCCCCTaGTTCAGCAGGGTCAGGAGAGCAGGATTCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: NIIQGAAALRAP*FSRVRRAGFIV Trigger: TACAATGAATCCTGCTCTCCTGACCCTGCTGAACAAGGGGGCCCTAAGAGCTGCTGCACCCTGGATGATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069695.9 ENSMUST00000132243.3 ENSMUST00000206064.2 ENSMUST00000206531.2 |
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