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Pregenerated sensors for TMEM14C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021361

Ensembl transcript IDs: ENSMUST00000021790.7

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCAACAGCACATGGTTGCCTCAGTGTGCTCAGGGTGGGTCTTTaGAAAAACGTCCCACTATGTAAATATGCTGCACTTATCTCTTCA +
Preference number: 1 (lower is better)
Translates to: TATAHGCLSVLRVGL*KNVPLCKYAALISS
Trigger: TGAAGAGATAAGTGCAGCATATTTACATAGTGGGACGTTTTTTCAAAGACCCACCCTGAGCACACTGAGGCAACCATGTGCTGTTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR TCA 90 bp TCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGTTGACAGTGACGCTTGCCACCTCTaGATGAATGGTCACCACAGC +
Preference number: 2 (lower is better)
Translates to: SHTSGQDAQLCPHPRVDSDACHL*MNGHHS
Trigger: GCTGTGGTGACCATTCATTCAGAGGTGGCAAGCGTC...ACTGTCAACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR GCA 90 bp CTCCAAGAGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCGCAACAGCACATGGTTaGCTCAGTGTGCTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LQEISHTSGQDAQLCPHPATAHG*LSVLRV
Trigger: CACCCTGAGCACACTGAGGCAACCATGTGCTGTTGC...GGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR GCA 90 bp GAGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGTTATGGTTGCCTCAGTGTaGTCAGGGTGGGTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: EISHTSGQDAQLCPHPRVMVASV*SGWVFE
Trigger: TTCAAAGACCCACCCTGAGCACACTGAGGCAACCAT...AACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR CCA 90 bp GAGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGTTTGTAATGTGGAGGTCTaGAGAGCTTCAAGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: EISHTSGQDAQLCPHPRVCNVEV*RASSLH
Trigger: GTGAAGACTTGAAGCTCTCCAGACCTCCACATTACA...AACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR CCA 90 bp CACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGTTGACAGTCTTCAACATTGTAATGTaGAGGTCTGGAGAGCTTCAA +
Preference number: 2 (lower is better)
Translates to: HTLLGRTHSSAPTPVLTVFNIVM*RSGELQ
Trigger: TTGAAGCTCTCCAGACCTCCACATTACAATGTTGAA...GACTGTCAACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR-3UTR TCA 90 bp TCCCACATCACCAATGTCTCCAAGAGATTTCACACACTTCTGGGCAGGACGCACCTTGCCACCTCTGAATaGATGGTCACCACAGCAACA +
Preference number: 2 (lower is better)
Translates to: SHITNVSKRFHTLLGRTHLATSE*MVTTAT
Trigger: TGTTGCTGTGGTGACCATTCATTCAGAGGTGGCAAG...GTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTGGAGACATTGGTGATGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR CCA 72 bp ACATCACCAATGTCTCCAAGAGATTTCACACACTTCTaGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGT +
Preference number: 3 (lower is better)
Translates to: TSPMSPRDFTHF*AGRTALPPPPC
Trigger: ACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTGGAGACATTGGTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR TCA 72 bp AGGCAGCGTGAGCTGAAGTCGGACGCTTGCCACCTCTaGATGAATGGTCACCACAGCAACAGCACATGGTTG +
Preference number: 3 (lower is better)
Translates to: RQRELKSDACHL*MNGHHSNSTWL
Trigger: CAACCATGTGCTGTTGCTGTGGTGACCATTCATTCAGAGGTGGCAAGCGTCCGACTTCAGCTCACGCTGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR CCA 72 bp CTGCACTTATCTCTTCAACATTGTAATGTGGAGGTCTaGAGAGCTTCAAGTCTTCACGAGCCCACTCGGGGT +
Preference number: 3 (lower is better)
Translates to: LHLSLQHCNVEV*RASSLHEPTRG
Trigger: ACCCCGAGTGGGCTCGTGAAGACTTGAAGCTCTCCAGACCTCCACATTACAATGTTGAAGAGATAAGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
3UTR TCA 72 bp GCACATGGTTGCCTCAGTGTGCTCAGGGTGGGTCTTTaGAAAAACGTCCCACTATGTAAATATGCTGCACTT +
Preference number: 3 (lower is better)
Translates to: AHGCLSVLRVGL*KNVPLCKYAAL
Trigger: AAGTGCAGCATATTTACATAGTGGGACGTTTTTTCAAAGACCCACCCTGAGCACACTGAGGCAACCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
CDS-3UTR GCA 90 bp TGTCTCCAAGAGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACGTAGGCCCCCAGGCCTaGCAGGCCCCCGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLQEISHTSGQDAQLCPHVGPQA*QAPEEE
Trigger: CTCTTCTTCGGGGGCCTGGCAGGCCTGGGGGCCTAC...GTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTGGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
CDS-3UTR CCA 90 bp AGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGTTGAAACCCACACATTCCTaGGATCCTGAGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RFHTLLGRTHSSAPTPVLKPTHS*DPETAG
Trigger: ACCAGCTGTCTCAGGATCCCAGGAATGTGTGGGTTT...CAACACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7
CDS-3UTR GCA 90 bp CAAGAGATTTCACACACTTCTGGGCAGGACGCACAGCTCTGCCCCCACCCCCGTGGTAGCAACCAGGGCTaGATAGCCGAAACCAAAATA +
Preference number: 4 (lower is better)
Translates to: QEISHTSGQDAQLCPHPRGSNQG*IAETKI
Trigger: TATTTTGGTTTCGGCTATGCAGCCCTGGTTGCTACC...ACGGGGGTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000021790.7