Pregenerated sensors for TMEM141 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026939Ensembl transcript IDs: ENSMUST00000028308.11, ENSMUST00000142087.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTCAAGTCTCTCTCAACACATGCAGGCTGCTGCTCCAGCAGCTaGGTGCAACAGGATTCAAGCCTCTCTGAGGCTCCTTGCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ALKSLSTHAGCCSSS*VQQDSSLSEAPCCS Trigger: AGAGCAGCAAGGAGCCTCAGAGAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 90 bp | TTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTCTCAACACATaGAGGCTGCTGCTCCAGCAGCTGGGTGCAACAGGATTCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: FGAEIRESTQVSLNT*RLLLQQLGATGFKP Trigger: AGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 90 bp | TGGTGCAGCAGTAGTCTTCACAGGTTTTTCAGGCAGGACCCCACATaGATGTGTAGGAGAGAGATGACACTAGAGGATGCATGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: WCSSSLHRFFRQDPT*MCRREMTLEDACVC Trigger: ACACACACATGCATCCTCTAGTGTCATCTCTCTCCTACACATGCATGTGGGGTCCTGCCTGAAAAACCTGTGAAGACTACTGCTGCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CCA 90 bp | ACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTaGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTCTCAACACATG | + |
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Preference number: 1 (lower is better) Translates to: TSHLLATTLQHSPWI*GRDQRKHSSLSQHM Trigger: CATGTGTTGAGAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CCA 90 bp | AAAAGGACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTaGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KRTSHLLATTLQHSP*IWGRDQRKHSSLSQ Trigger: TTGAGAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGCGGAAGATCTCCCCCTCCCAAGCCTTGTTCCGAGCTGGCAGGTCCTGTGTGTGTGTGTTTGCTaGGGTAGGAGGGACTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CSAEDLPLPSLVPSWQVLCVCVC*GRRDCP Trigger: AGGACAGTCCCTCCTACCTCAGCAAACACACACACA...CAGGACCTGCCAGCTCGGAACAAGGCTTGGGAGGGGGAGATCTTCCGCAGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCCCTCCCAAGCCTTGTTCCGAGCTGGCAGGTCCTGGATTTGGTGCAGCAGGCAGGACCCCACATaGATGTGTAGGAGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: ISPSQALFRAGRSWIWCSRQDPT*MCRREM Trigger: CATCTCTCTCCTACACATGCATGTGGGGTCCTGCCT...GCTGCACCAAATCCAGGACCTGCCAGCTCGGAACAAGGCTTGGGAGGGGGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATCTCCCCCTCCCAAGCCTTGTTCCGAGCTGGCAGGTCCTGGATTTGGTGCTGTGTGTGTGTTTGCTaGGGTAGGAGGGACTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KISPSQALFRAGRSWIWCCVCVC*GRRDCP Trigger: AGGACAGTCCCTCCTACCTCAGCAAACACACACACA...GCACCAAATCCAGGACCTGCCAGCTCGGAACAAGGCTTGGGAGGGGGAGATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGCTCCAGCAGCTGGGTGCAACAGGATTCAAGCCTCTCTGAGGCTCCTTAGGCAGGACCCCACATaGATGTGTAGGAGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: AAAPAAGCNRIQASLRLLRQDPT*MCRREM Trigger: CATCTCTCTCCTACACATGCATGTGGGGTCCTGCCT...AAGGAGCCTCAGAGAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGTGCAACAGGATTCAAGCCTCTCTGAGGCTCCTTGCTGCTCTGCGGAAAGGTCCTGGATTTGGTaGAGCAGTAGTCTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SWVQQDSSLSEAPCCSAERSWIW*SSSLHR Trigger: CCTGTGAAGACTACTGCTGCACCAAATCCAGGACCT...TTCCGCAGAGCAGCAAGGAGCCTCAGAGAGGCTTGAATCCTGTTGCACCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTCTCAACCCCTGCTTCGCATCCTaGACCTCAGCAGCCAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: ILLGFGAEIRESTQVSLNPCFAS*TSAARA Trigger: CGCTCTGGCTGCTGAGGTGCAGGATGCGAAGCAGGG...GTTGAGAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCAACACATGCAGGCTaGTGCTCCAGCAGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSNILLGFGAEIRESTQVSTHAG*CSSSWV Trigger: CACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGA...GACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGCCCTGCTTCGCATCCTaGACCTCAGCAGCCAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: HLLATTLQHSPWIWGRDQPCFAS*TSAARA Trigger: CGCTCTGGCTGCTGAGGTGCAGGATGCGAAGCAGGG...CTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGACACATGCAGGCTGCTaGTCCAGCAGCTGGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: NSPTFSLDLGQRSEKALKTHAGC*SSSWVQ Trigger: TTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGT...CTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGGCTCCAGCAGCTGGGTaGAACAGGATTCAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSPTFSLDLGQRSEKALKAPAAG*NRIQAS Trigger: AGAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGC...CTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGGATTCAAGCCTCTCTaGGGCTCCTTGCTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TSHLLATTLQHSPWIWGRGFKPL*GSLLLC Trigger: GCAGAGCAGCAAGGAGCCTCAGAGAGGCTTGAATCC...TCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGAGAAAGCACTCAAGTCTCTCTCAACACATGCAGGCTGCTGCTCCAGCAGATGACGTTAGATCTGTaGTCTAGGATCTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IRESTQVSLNTCRLLLQQMTLDL*SRIFPA Trigger: AGCAGGGAAGATCCTAGAGCACAGATCTAACGTCAT...CTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGCTTTCTCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCGATGACACTAGAGGATaGATGTGTGTGTGTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LSNILLGFGAEIRESTQVDDTRG*MCVCVF Trigger: AAACACACACACACACATGCATCCTCTAGTGTCATC...GACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAAGGTCCTGGATTTGGTaGAGCAGTAGTCTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSHLLATTLQHSPWIWGRRSWIW*SSSLHR Trigger: CCTGTGAAGACTACTGCTGCACCAAATCCAGGACCT...TCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CAA 90 bp | GACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTaGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTCTCAACACAT | + |
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Preference number: 2 (lower is better) Translates to: DKPFISYNSPTFSLD*GQRSEKALKSLSTH Trigger: ATGTGTTGAGAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAATGACGTTAGATCTGTaGTCTAGGATCTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TSHLLATTLQHSPWIWGRMTLDL*SRIFPA Trigger: AGCAGGGAAGATCCTAGAGCACAGATCTAACGTCAT...TCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR TCA 72 bp | CTCCAGCAGCTGGGTGCAACAGGATTCAAGCCTCTCTaGGGCTCCTTGCTGCTCTGCGGAAGATCTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LQQLGATGFKPL*GSLLLCGRSPP Trigger: AGGGGGAGATCTTCCGCAGAGCAGCAAGGAGCCTCAGAGAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 72 bp | GTGCAACAGGATTCAAGCCTCTCTGAGGCTCCTTGCTaGTCTGCGGAAGATCTCCCCCTCCCAAGCCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VQQDSSLSEAPC*SAEDLPLPSLV Trigger: AACAAGGCTTGGGAGGGGGAGATCTTCCGCAGAGCAGCAAGGAGCCTCAGAGAGGCTTGAATCCTGTTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CCA 72 bp | TCTCTCTCAACACATGCAGGCTGCTGCTCCAGCAGCTaGGTGCAACAGGATTCAAGCCTCTCTGAGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLSTHAGCCSSS*VQQDSSLSEAP Trigger: AGGAGCCTCAGAGAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 72 bp | AAAGCACTCAAGTCTCTCTCAACACATGCAGGCTGCTaGTCCAGCAGCTGGGTGCAACAGGATTCAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: KALKSLSTHAGC*SSSWVQQDSSL Trigger: GAGGCTTGAATCCTGTTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 72 bp | GAGATCAGAGAAAGCACTCAAGTCTCTCTCAACACATaGAGGCTGCTGCTCCAGCAGCTGGGTGCAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: EIRESTQVSLNT*RLLLQQLGATG Trigger: TCCTGTTGCACCCAGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGCTTTCTCTGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR GCA 72 bp | AGTAGTCTTCACAGGTTTTTCAGGCAGGACCCCACATaGATGTGTAGGAGAGAGATGACACTAGAGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLHRFFRQDPT*MCRREMTLEDA Trigger: TGCATCCTCTAGTGTCATCTCTCTCCTACACATGCATGTGGGGTCCTGCCTGAAAAACCTGTGAAGACTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CCA 72 bp | AGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTaGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: SHLLATTLQHSP*IWGRDQRKHSS Trigger: ACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTAGGATCTTCCCTGCTTCGCATCCTGCACCTCAGCAGCCAGAGCGCTCTGTGCTTATGTCTTTaGGGAGCTGCCCGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CALGSSLLRILHLSSQSALCLCL*GAARSP Trigger: TGGAGACCGGGCAGCTCCCCAAAGACATAAGCACAG...AGCGCTCTGGCTGCTGAGGTGCAGGATGCGAAGCAGGGAAGATCCTAGAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR GCA 90 bp | GATCTCCCCCTCCCAAGCCTTGTTCCGAGCTGGCAGGTCCTGGATTTGGTGCAGAGTCGTGAGGATCTGTaGTTATGTCTTTGGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: DLPLPSLVPSWQVLDLVQSREDL*LCLWGA Trigger: AGCTCCCCAAAGACATAAGCACAGATCCTCACGACT...CTGCACCAAATCCAGGACCTGCCAGCTCGGAACAAGGCTTGGGAGGGGGAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTTGCTGCTCTGCGGAAGATCTCCCCCTCCCAAGCCTTGTTCCGAGCTAGAGCCAGAGATTGCTaGATTTCTGACACTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: RLLAALRKISPSQALFRARARDC*ISDTPY Trigger: GTATGGAGTGTCAGAAATGCAGCAATCTCTGGCTCT...AGCTCGGAACAAGGCTTGGGAGGGGGAGATCTTCCGCAGAGCAGCAAGGAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR CCA 90 bp | CAGAGAAAGCACTCAAGTCTCTCTCAACACATGCAGGCTGCTGCTCCAGCAGCTCTGTGCTTATGTCTTTaGGGAGCTGCCCGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRKHSSLSQHMQAAAPAALCLCL*GAARSP Trigger: TGGAGACCGGGCAGCTCCCCAAAGACATAAGCACAG...AGCTGCTGGAGCAGCAGCCTGCATGTGTTGAGAGAGACTTGAGTGCTTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR TCA 90 bp | AGGCTCCTTGCTGCTCTGCGGAAGATCTCCCCCTCCCAAGCCTTGTTCCGAGCTAGATTGCTGCATTTCTaGCACTCCATACTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: RLLAALRKISPSQALFRARLLHF*HSILVT Trigger: AGTGACAAGTATGGAGTGTCAGAAATGCAGCAATCT...AGCTCGGAACAAGGCTTGGGAGGGGGAGATCTTCCGCAGAGCAGCAAGGAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAAAGCACTCAAGTCAGTCGTGAGGATCTGTaGTTATGTCTTTGGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSNILLGFGAEIRESTQVSREDL*LCLWGA Trigger: AGCTCCCCAAAGACATAAGCACAGATCCTCACGACT...GACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGCTGGCCACAGATCTaGCAGACACTAGGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLLATTLQHSPWIWGRDQSWPQI*QTLGSS Trigger: GGAGCTTCCTAGTGTCTGCCAGATCTGTGGCCAGCT...CTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028308.11 |
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| CDS-3UTR GCA 90 bp | CATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTTGGGGCAGAGATCAGAGAGCCAGAGATTGCTaGATTTCTGACACTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: HLLATTLQHSPWIWGRDQRARDC*ISDTPY Trigger: GTATGGAGTGTCAGAAATGCAGCAATCTCTGGCTCT...CTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| 3UTR CAA 72 bp | TTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTaGGGGCAGAGATCAGAGAAAGCACTCAAGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FISYNSPTFSLD*GQRSEKALKSL Trigger: GAGAGACTTGAGTGCTTTCTCTGATCTCTGCCCCAAATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS-3UTR TCA 90 bp | GGAAAAAGGACAAGCCATTTATTAGCTACAACTCTCCAACATTCTCCTTGGATTAGATTGCTGCATTTCTaGCACTCCATACTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GKRTSHLLATTLQHSPWIRLLHF*HSILVT Trigger: AGTGACAAGTATGGAGTGTCAGAAATGCAGCAATCT...AATCCAAGGAGAATGTTGGAGAGTTGTAGCTAATAAATGGCTTGTCCTTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS CCA 90 bp | GTGCCTGTGACAAAAGTGAAAACGCCCTTCATGAAGGCGTGCGACTaGCAGGCAGCAAATTCCTCGAGTCCCGGGTGCCTGGCGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: VPVTKVKTPFMKACD*QAANSSSPGCLAAT Trigger: CGTGGCCGCCAGGCACCCGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGTTTTCACTTTTGTCACAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS GCA 90 bp | GCACCAGTGCCTGTGACAAAAGTGAAAACGCCCTTCATGAAGGCGTaGGACTGGCAGGCAGCAAATTCCTCGAGTCCCGGGTGCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: APVPVTKVKTPFMKA*DWQAANSSSPGCLA Trigger: CGCCAGGCACCCGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGTTTTCACTTTTGTCACAGGCACTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS CCA 90 bp | AGAGATTGCTGCATTTCTGACACTCCATACTTGTCACTCTGTAGCTaGCCACAGATCTGGCAGACACTAGGAAGCTCCACTGCACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RDCCISDTPYLSLCS*PQIWQTLGSSTAQG Trigger: ACCCTGTGCAGTGGAGCTTCCTAGTGTCTGCCAGATCTGTGGCCAGCTACAGAGTGACAAGTATGGAGTGTCAGAAATGCAGCAATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028308.11 |
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| CDS GCA 72 bp | TGCGACTGGCAGGCAGCAAATTCCTCGAGTCCCGGGTaGCTGGCGGCCACGGCGTCATCCACACGGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: CDWQAANSSSPG*LAATASSTRDK Trigger: CTTGTCCCGTGTGGATGACGCCGTGGCCGCCAGGCACCCGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS GCA 72 bp | CCTGTGACAAAAGTGAAAACGCCCTTCATGAAGGCGTaGGACTGGCAGGCAGCAAATTCCTCGAGTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PVTKVKTPFMKA*DWQAANSSSPG Trigger: CCCGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGTTTTCACTTTTGTCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS CCA 72 bp | ACAAAAGTGAAAACGCCCTTCATGAAGGCGTGCGACTaGCAGGCAGCAAATTCCTCGAGTCCCGGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TKVKTPFMKACD*QAANSSSPGCL Trigger: CAGGCACCCGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGTTTTCACTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028308.11 ENSMUST00000142087.2 |
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| CDS CCA 72 bp | TGCATTTCTGACACTCCATACTTGTCACTCTGTAGCTaGCCACAGATCTGGCAGACACTAGGAAGCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: CISDTPYLSLCS*PQIWQTLGSST Trigger: AGTGGAGCTTCCTAGTGTCTGCCAGATCTGTGGCCAGCTACAGAGTGACAAGTATGGAGTGTCAGAAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028308.11 |
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| CDS CCA 72 bp | TGCATTTCTGACACTCCATACTTGTCACTCTGTAGCTaGCCACAGATCCTGCAATGGCAGACACTAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CISDTPYLSLCS*PQILQWQTLGS Trigger: GCTTCCTAGTGTCTGCCATTGCAGGATCTGTGGCCAGCTACAGAGTGACAAGTATGGAGTGTCAGAAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142087.2 |
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| CDS CAA 72 bp | AGAGCCAGAGATTGCTGCATTTCTGACACTCCATACTaGTCACTCTGTAGCTGGCCACAGATCTGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: RARDCCISDTPY*SLCSWPQIWQT Trigger: TGTCTGCCAGATCTGTGGCCAGCTACAGAGTGACAAGTATGGAGTGTCAGAAATGCAGCAATCTCTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028308.11 |
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| CDS CAA 72 bp | AGAGCCAGAGATTGCTGCATTTCTGACACTCCATACTaGTCACTCTGTAGCTGGCCACAGATCCTGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: RARDCCISDTPY*SLCSWPQILQW Trigger: CCATTGCAGGATCTGTGGCCAGCTACAGAGTGACAAGTATGGAGTGTCAGAAATGCAGCAATCTCTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142087.2 |
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