Pregenerated sensors for TMEM139 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071506Ensembl transcript IDs: ENSMUST00000095987.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTCCAGAATGTTTCCAGAAGAATCTAGGTGTGCCATTTATCTGTaGACGACATGCCACAGCCCGACTCCCCGCTGCTTTGAAGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GSRMFPEESRCAIYL*TTCHSPTPRCFEGL Trigger: GAGGCCTTCAAAGCAGCGGGGAGTCGGGCTGTGGCATGTCGTTCACAGATAAATGGCACACCTAGATTCTTCTGGAAACATTCTGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGTATCCCTCCAGCTTCTCTTGGTAACTTATCTCTTTCTCATCTTCCACCTTGACACTAGGAAATGCTaGGCAAATGAGTGCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: EVSLQLLLVTYLFLIFHLDTRKC*ANECTG Trigger: ACCTGTGCACTCATTTGCCCAGCATTTCCTAGTGTC...AAGGTGGAAGATGAGAAAGAGATAAGTTACCAAGAGAAGCTGGAGGGATACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCTCTTCCACCTTACTCTaGAAATACTGGTCATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: QGDLVSTIEETQQSLRGISSTLL*KYWSSD Trigger: ATCTGATGACCAGTATTTCCAGAGTAAGGTGGAAGA...GATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| 3UTR-3UTR GCA 90 bp | CATCAGATAGGTTCCAGAATGTTTCCAGAAGAATCTAGGTGTGCCATTTATCTGATAGACACTAGGAAATaGTGGGCAAATGAGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: HQIGSRMFPEESRCAIYLIDTRK*WANECT Trigger: TGTGCACTCATTTGCCCAGCATTTCCTAGTGTCTAT...CAGATAAATGGCACACCTAGATTCTTCTGGAAACATTCTGGAACCTATCTGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| 3UTR CCA 72 bp | ATCTCTTTCTCATCTTCCACCTTACTCTGGAAATACTaGTCATCAGATAGGTTCCAGAATGTTTCCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: ISFSSSTLLWKY*SSDRFQNVSRR Trigger: TCTTCTGGAAACATTCTGGAACCTATCTGATGACCAGTATTTCCAGAGTAAGGTGGAAGATGAGAAAGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | AAGAATCTAGGTGTGCCATTTATCTGTGAACGACATGCCACAGCCCGACTCCCCGCAGATCAGGAGCAGTaGCCACAACTCGTGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: KNLGVPFICERHATARLPADQEQ*PQLVDP Trigger: GGGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGC...GGGGAGTCGGGCTGTGGCATGTCGTTCACAGATAAATGGCACACCTAGATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | CGCTGCTTTGAAGGCCTCGATTGTGATGTCCGGGTAAAACCAGTTTCTGATCCAGGTTGCTCCAGCTCTTaGAGGTGGCTCTGTGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RCFEGLDCDVRVKPVSDPGCSSS*RWLCGC Trigger: ACAACCACAGAGCCACCTCCAAGAGCTGGAGCAACC...TGGATCAGAAACTGGTTTTACCCGGACATCACAATCGAGGCCTTCAAAGCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR GCA 90 bp | CTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCCCTCCAGCGGAGGAGGGAGGCACTaGTCAGGAAGAGAAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGVYNRRNTAVTQRYPSSGGGRH*SGREMA Trigger: AGCCATTTCTCTTCCTGAGCAGTGCCTCCCTCCTCC...GCTGGAGGGATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCTGGGACTGTCTGGTTaGCTAGGCTGTGCCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYLGLSG*LGCAPS Trigger: TGAGGGGGCACAGCCTAGCCAACCAGACAGTCCCAG...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR TCA 90 bp | AGTCACTCAGAGGTATCCCTCCAGCTTCTCTTGGTAACTTATCTCTTTCTCATCGTCTTGCGCTTGGCCTaGGGCCTCTGGATTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SHSEVSLQLLLVTYLFLIVLRLA*GLWILS Trigger: ACTGAGAATCCAGAGGCCTCAGGCCAAGCGCAAGAC...GATGAGAAAGAGATAAGTTACCAAGAGAAGCTGGAGGGATACCTCTGAGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | GTAAAACCAGTTTCTGATCCAATAGACACTAGGAAATGCTGGGCAAATGAGTGCTGTGCTGGGACTGTCTaGTTGGCTAGGCTGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VKPVSDPIDTRKCWANECCAGTV*LARLCP Trigger: GGGGCACAGCCTAGCCAACCAGACAGTCCCAGCACA...GCACTCATTTGCCCAGCATTTCCTAGTGTCTATTGGATCAGAAACTGGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR TCA 90 bp | CGCTGCTTTGAAGGCCTCGATTGTGATGTCCGGGTAAAACCAGTTTCTGATCCACAGCATGAGCAAAACTaGTTTCATAGGCAGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RCFEGLDCDVRVKPVSDPQHEQN*FHRQEV Trigger: CACCTCCTGCCTATGAAATCAGTTTTGCTCATGCTG...TGGATCAGAAACTGGTTTTACCCGGACATCACAATCGAGGCCTTCAAAGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATGATTCTCAGTCTGCCTaGAGCTTGGCATCGATCGGG | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYDSQSA*SLASIG Trigger: CCCGATCGATGCCAAGCTCCAGGCAGACTGAGAATC...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | CAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCTTCCAGGGTTTCCTCTaGCAGTCATTGTCCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QGDLVSTIEETQQSLRGIFQGFL*QSLSPL Trigger: CAGAGGGGACAATGACTGCCAGAGGAAACCCTGGAA...GATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR TCA 90 bp | GAGGTATCCCTCCAGCTTCTCTTGGTAACTTATCTCTTTCTCATCTTCCACCTTCGACATCAGACTGTATaGCCAGTAAAGCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: EVSLQLLLVTYLFLIFHLRHQTV*PVKPAP Trigger: TGGGGCTGGCTTTACTGGTCATACAGTCTGATGTCG...AAGGTGGAAGATGAGAAAGAGATAAGTTACCAAGAGAAGCTGGAGGGATACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR TCA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCTCCTGGGGATATTATaGTACTGCTGTAAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYLLGIL*YCCKGV Trigger: CACCCCCTTACAGCAGTATCATAATATCCCCAGGAG...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | TCACTCAGAGGTATCCCTCCAGCTTCTCTTGGTAACTTATCTCTTTCTCATCTTTCCAGCTCTTGGAGGTaGCTCTGTGGTTGTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SLRGIPPASLGNLSLSHLSSSWR*LCGCES Trigger: GGATTCACAACCACAGAGCCACCTCCAAGAGCTGGA...AAGATGAGAAAGAGATAAGTTACCAAGAGAAGCTGGAGGGATACCTCTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR GCA 90 bp | GTAAAACCAGTTTCTGATCCAATAGACACTAGGAAATGCTGGGCAAATGAGTGCTCTGGATTCTCAGTCTaGCTGGAGCTTGGCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: VKPVSDPIDTRKCWANECSGFSV*LELGID Trigger: ATCGATGCCAAGCTCCAGGCAGACTGAGAATCCAGA...GCACTCATTTGCCCAGCATTTCCTAGTGTCTATTGGATCAGAAACTGGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATTGCCCCCTCAACTCCTaGGGATATTATGATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYCPLNS*GYYDTA Trigger: AGCAGTATCATAATATCCCCAGGAGTTGAGGGGGCA...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATTTCATAGGCAGGAGGTaGAGTACTAGGCTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYFIGRR*STRLQF Trigger: AAACTGGAGCCTAGTACTCCACCTCCTGCCTATGAA...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | CATCAGATAGGTTCCAGAATGTTTCCAGAAGAATCTAGGTGTGCCATTTATCTGAGTGGCCACAACTCGTaGACCCCTAAGTCGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: HQIGSRMFPEESRCAIYLSGHNS*TPKSKN Trigger: ATTCTTCGACTTAGGGGTCCACGAGTTGTGGCCACT...CAGATAAATGGCACACCTAGATTCTTCTGGAAACATTCTGGAACCTATCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CCA 90 bp | GTAAAACCAGTTTCTGATCCAATAGACACTAGGAAATGCTGGGCAAATGAGTGCAGCCTGTTCATAGGTTaGCACCTCAAAAGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: VKPVSDPIDTRKCWANECSLFIG*HLKSSI Trigger: AATGGAGCTTTTGAGGTGCCAACCTATGAACAGGCT...GCACTCATTTGCCCAGCATTTCCTAGTGTCTATTGGATCAGAAACTGGTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR TCA 90 bp | AGTTATTTTTATGTTTTTACTAGCATCCCGTTCTTGTGCAAACTATTCAGCTCCGTGGCTCTGTGGTTGTaGATCCATCACCTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SYFYVFTSIPFLCKLFSSVALWL*IHHLYS Trigger: GCTGTAGAGGTGATGGATTCACAACCACAGAGCCAC...GGAGCTGAATAGTTTGCACAAGAACGGGATGCTAGTAAAAACATAAAAATAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR GCA 90 bp | AGTTATTTTTATGTTTTTACTAGCATCCCGTTCTTGTGCAAACTATTCAGCTCCAAAGCTCCATTGTCTTaGGCTTGGCCTGAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SYFYVFTSIPFLCKLFSSKAPLS*AWPEAS Trigger: AGAGGCCTCAGGCCAAGCGCAAGACAATGGAGCTTT...GGAGCTGAATAGTTTGCACAAGAACGGGATGCTAGTAAAAACATAAAAATAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR GCA 90 bp | AGTTATTTTTATGTTTTTACTAGCATCCCGTTCTTGTGCAAACTATTCAGCTCCAGGAAGAGAAATGGCTaGTTCAGTTTCCCCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: SYFYVFTSIPFLCKLFSSRKRNG*FSFPNN Trigger: GTTGTTGGGGAAACTGAAGCAGCCATTTCTCTTCCT...GGAGCTGAATAGTTTGCACAAGAACGGGATGCTAGTAAAAACATAAAAATAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS GCA 90 bp | GGAGGTGGAGTACTAGGCTCCAGTTTGGGGGCCACTCTCATGCTTTaGAGATCAGGAGCAGTGGCCACAACTCGTGGACCCCTAAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: GGGVLGSSLGATLML*RSGAVATTRGPLSR Trigger: TCGACTTAGGGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCCCCCAAACTGGAGCCTAGTACTCCACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS GCA 90 bp | GCTCCATTGTCTTGCGCTTGGCCTGAGGCCTCTGGATTCTCAGTCTaGCTGGAGCTTGGCATCGATCGGGAGCATCGTTCCATAACACAG | + |
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Preference number: 5 (lower is better) Translates to: APLSCAWPEASGFSV*LELGIDREHRSITQ Trigger: CTGTGTTATGGAACGATGCTCCCGATCGATGCCAAGCTCCAGGCAGACTGAGAATCCAGAGGCCTCAGGCCAAGCGCAAGACAATGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CCA 90 bp | TGTGCTGGGACTGTCTGGTTGGCTAGGCTGTGCCCCCTCAACTCCTaGGGATATTATGATACTGCTGTAAGGGGGTGGTTGCTCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CAGTVWLARLCPLNS*GYYDTAVRGWLLQL Trigger: GAGCTGGAGCAACCACCCCCTTACAGCAGTATCATAATATCCCCAGGAGTTGAGGGGGCACAGCCTAGCCAACCAGACAGTCCCAGCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | AAGAATCTAGGTGTGCCATTTATCTGTGAACGACATGCCACAGCCCGACTCCCCGCTGTAAGGGGGTGGTaGCTCCAGCTCTTGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KNLGVPFICERHATARLPAVRGW*LQLLEV Trigger: CACCTCCAAGAGCTGGAGCAACCACCCCCTTACAGC...GGGGAGTCGGGCTGTGGCATGTCGTTCACAGATAAATGGCACACCTAGATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS TCA 90 bp | TTCATAGGTTGGCACCTCAAAAGCTCCATTGTCTTGCGCTTGGCCTaGGGCCTCTGGATTCTCAGTCTGCCTGGAGCTTGGCATCGATCG | + |
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Preference number: 5 (lower is better) Translates to: FIGWHLKSSIVLRLA*GLWILSLPGAWHRS Trigger: CGATCGATGCCAAGCTCCAGGCAGACTGAGAATCCAGAGGCCTCAGGCCAAGCGCAAGACAATGGAGCTTTTGAGGTGCCAACCTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CCA 90 bp | GGCCACTCTCATGCTTTGCAGATCAGGAGCAGTGGCCACAACTCGTaGACCCCTAAGTCGAAGAATTCTTCCAGGGTTTCCTCTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GHSHALQIRSSGHNS*TPKSKNSSRVSSGS Trigger: ACTGCCAGAGGAAACCCTGGAAGAATTCTTCGACTTAGGGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS TCA 90 bp | GTAAGGGGGTGGTTGCTCCAGCTCTTGGAGGTGGCTCTGTGGTTGTaGATCCATCACCTCTACAGCCTGTTCATAGGTTGGCACCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VRGWLLQLLEVALWL*IHHLYSLFIGWHLK Trigger: TTTGAGGTGCCAACCTATGAACAGGCTGTAGAGGTGATGGATTCACAACCACAGAGCCACCTCCAAGAGCTGGAGCAACCACCCCCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | TCAGGGAGACTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATGCTGGGACTGTCTGGTaGGCTAGGCTGTGCCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SGRLGVYNRRNTAVTQRYAGTVW*ARLCPL Trigger: GAGGGGGCACAGCCTAGCCAACCAGACAGTCCCAGC...ATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAGTCTCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | GAGGTATCCCTCCAGCTTCTCTTGGTAACTTATCTCTTTCTCATCTTCCACCTTTGGTTGCTCCAGCTCTaGGAGGTGGCTCTGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EVSLQLLLVTYLFLIFHLWLLQL*EVALWL Trigger: CAACCACAGAGCCACCTCCAAGAGCTGGAGCAACCA...AAGGTGGAAGATGAGAAAGAGATAAGTTACCAAGAGAAGCTGGAGGGATACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | CCAGAATGTTTCCAGAAGAATCTAGGTGTGCCATTTATCTGTGAACGACATGCCTTCCTCTGGCAGTCATaGTCCCCTCTGAGCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: PECFQKNLGVPFICERHAFLWQS*SPLSPL Trigger: GAGTGGGCTCAGAGGGGACAATGACTGCCAGAGGAA...GGCATGTCGTTCACAGATAAATGGCACACCTAGATTCTTCTGGAAACATTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | CCAGAATGTTTCCAGAAGAATCTAGGTGTGCCATTTATCTGTGAACGACATGCCGGCCACTCTCATGCTTaGCAGATCAGGAGCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: PECFQKNLGVPFICERHAGHSHA*QIRSSG Trigger: GCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCC...GGCATGTCGTTCACAGATAAATGGCACACCTAGATTCTTCTGGAAACATTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS-3UTR CAA 90 bp | CTTGGTGTCTACAATAGAAGAAACACAGCAGTCACTCAGAGGTATCCCTCCAGCCAGCCTGTTCATAGGTaGGCACCTCAAAAGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LGVYNRRNTAVTQRYPSSQPVHR*APQKLH Trigger: ATGGAGCTTTTGAGGTGCCAACCTATGAACAGGCTG...GCTGGAGGGATACCTCTGAGTGACTGCTGTGTTTCTTCTATTGTAGACACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS GCA 72 bp | TCTTGCGCTTGGCCTGAGGCCTCTGGATTCTCAGTCTaGCTGGAGCTTGGCATCGATCGGGAGCATCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCAWPEASGFSV*LELGIDREHRS Trigger: GGAACGATGCTCCCGATCGATGCCAAGCTCCAGGCAGACTGAGAATCCAGAGGCCTCAGGCCAAGCGCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CAA 90 bp | AGGAGGTGGAGTACTAGGCTCCAGTTTGGGGGCCACTCTCATGCTTaGCAGATCAGGAGCAGTGGCCACAACTCGTGGACCCCTAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: RRWSTRLQFGGHSHA*QIRSSGHNSWTPKS Trigger: CGACTTAGGGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCCCCCAAACTGGAGCCTAGTACTCCACCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS TCA 72 bp | TCTTCCAGGGTTTCCTCTGGCAGTCATTGTCCCCTCTaGGCCCACTCGCCTTTTCAGACTGCCTGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSRVSSGSHCPL*AHSPFQTACAG Trigger: CCCAGCACAGGCAGTCTGAAAAGGCGAGTGGGCTCAGAGGGGACAATGACTGCCAGAGGAAACCCTGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS GCA 72 bp | GTACTAGGCTCCAGTTTGGGGGCCACTCTCATGCTTTaGAGATCAGGAGCAGTGGCCACAACTCGTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: VLGSSLGATLML*RSGAVATTRGP Trigger: GGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCCCCCAAACTGGAGCCTAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CAA 72 bp | AGTACTAGGCTCCAGTTTGGGGGCCACTCTCATGCTTaGCAGATCAGGAGCAGTGGCCACAACTCGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: STRLQFGGHSHA*QIRSSGHNSWT Trigger: GGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATGAGAGTGGCCCCCAAACTGGAGCCTAGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CCA 72 bp | ACTGTCTGGTTGGCTAGGCTGTGCCCCCTCAACTCCTaGGGATATTATGATACTGCTGTAAGGGGGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TVWLARLCPLNS*GYYDTAVRGWL Trigger: CAACCACCCCCTTACAGCAGTATCATAATATCCCCAGGAGTTGAGGGGGCACAGCCTAGCCAACCAGACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS TCA 72 bp | TGGTTGCTCCAGCTCTTGGAGGTGGCTCTGTGGTTGTaGATCCATCACCTCTACAGCCTGTTCATAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WLLQLLEVALWL*IHHLYSLFIGW Trigger: CCAACCTATGAACAGGCTGTAGAGGTGATGGATTCACAACCACAGAGCCACCTCCAAGAGCTGGAGCAACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CCA 72 bp | AACTCCTGGGGATATTATGATACTGCTGTAAGGGGGTaGTTGCTCCAGCTCTTGGAGGTGGCTCTGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: NSWGYYDTAVRG*LLQLLEVALWL Trigger: CAACCACAGAGCCACCTCCAAGAGCTGGAGCAACCACCCCCTTACAGCAGTATCATAATATCCCCAGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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| CDS CCA 72 bp | CATGCTTTGCAGATCAGGAGCAGTGGCCACAACTCGTaGACCCCTAAGTCGAAGAATTCTTCCAGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HALQIRSSGHNS*TPKSKNSSRVS Trigger: GGAAACCCTGGAAGAATTCTTCGACTTAGGGGTCCACGAGTTGTGGCCACTGCTCCTGATCTGCAAAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095987.4 |
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