Pregenerated sensors for TMEM138 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024666Ensembl transcript IDs: ENSMUST00000025568.3, ENSMUST00000235990.2, ENSMUST00000236099.2, ENSMUST00000236185.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCACCCATGTGACATaGAGTGGTCACCTTCGGACTTGCATGAACTCCTTGCGAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: AGAFYQEGKVFTHVT*SGHLRTCMNSLRSH Trigger: GTGGCTTCGCAAGGAGTTCATGCAAGTCCGAAGGTGACCACTTCATGTCACATGGGTGAATACCTTTCCTTCCTGGTAGAAGGCGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR GCA 90 bp | TACAAAGTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTaGACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATTTGC | + |
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Preference number: 1 (lower is better) Translates to: YKVGREGSGRLRRQD*TLHYSLRQGNTVIC Trigger: GCAAATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTACTTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGACCTGGTGCCAATGGCTaGTCCTCCCTGGAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ANGCSSLESSPGRRLLPGPGANG*SSLESS Trigger: GCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGG...TCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGCCTGGTGCCAATGGCTaGTCCTCCCTGGAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPMAAPPWRAAQAGAFYQPGANG*SSLESS Trigger: GCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGG...CTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACCCCCCTGCTTCCTGGTaGCAATGGCTGCTCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRLRRQDCTLHYSLRQGNPPASW*QWLLLP Trigger: AGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGG...GTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGTATTCACCCATGTaGCATGAAGTGGTCACCTTC | + |
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Preference number: 2 (lower is better) Translates to: ANGCSSLESSPGRRLLPGRYSPM*HEVVTF Trigger: GAAGGTGACCACTTCATGTCACATGGGTGAATACCT...TCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGGTGGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCCCTAGGAAGTCCCCCTaGTTCCTGGTGCCAATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PRVASNHSNPPASVSNHAPRKSP*FLVPMA Trigger: AGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGG...GGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCCACCCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACCAGTCACTCAAGGATaGGGTCAGCAGAACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: WAVEEARLHFALQSAAGKPVTQG*GQQNRA Trigger: GGCCCTGTTCTGCTGACCCCATCCTTGAGTGACTGG...TTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACCTGGTGCCAATGGCTaGTCCTCCCTGGAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRKRRKWAVEEARLHFALPGANG*SSLESS Trigger: GCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGG...TAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATCCCCCTGCTTCCTGGTaGCAATGGCTGCTCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EEARLHFALQSAAGKHCNPPASW*QWLLLP Trigger: AGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGG...ATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGGTCAGTCAGGAGGACATGGCCGTCACTCTCTGCATCCTCCAGTCACTCTCCAACCATGCCTGGTaGATCTTCCTTCTTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: GVVSQEDMAVTLCILQSLSNHAW*IFLLEC Trigger: GCATTCAAGAAGGAAGATTCACCAGGCATGGTTGGA...GAGTGACTGGAGGATGCAGAGAGTGACGGCCATGTCCTCCTGACTGACCACACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGTGGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTCACCTTCGGACTTaGATGAACTCCTTGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LGWPQTTAILLPLFPTMPGHLRT*MNSLRS Trigger: GCTTCGCAAGGAGTTCATGCAAGTCCGAAGGTGACC...AGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCCACCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATTTGGCTTCCTGGTGCCAATaGCTGCTCCTCCCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EARLHFALQSAAGKHCNLASWCQ*LLLPGE Trigger: CTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGC...CAAATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGAATCTCATGTAGGGAGATGCTaGGGGCAAGGTACACAGATG | + |
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Preference number: 2 (lower is better) Translates to: PQTTAILLPLFPTMPGESHVGRC*GQGTQM Trigger: CATCTGTGTACCTTGCCCTCAGCATCTCCCTACATG...AGATTCACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGACTGCGGCTAGTCTCTaGAATACAAACAGTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GGLKPQQSSCLCFQPCLVTAASL*NTNSVC Trigger: GCAAACACTGTTTGTATTCCAGAGACTAGCCGCAGT...CACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGAATTCCAACCATGCCTGGTaGATCTTCCTTCTTGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: GLKPQQSSCLCFQPCLVNSNHAW*IFLLEC Trigger: GCATTCAAGAAGGAAGATTCACCAGGCATGGTTGGA...ATTCACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAAGGTATTCACCCATGTaGCATGAAGTGGTCACCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRRQDCTLHYSLRQGNTVRYSPM*HEVVTF Trigger: GAAGGTGACCACTTCATGTCACATGGGTGAATACCT...TACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACCTCTGTTTCCAACCATaGCTGGTGAATCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VGREGSGRLRRQDCTLHYLCFQP*LVNLPS Trigger: AGAAGGAAGATTCACCAGGCATGGTTGGAAACAGAG...GTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTTTGGATATAAAATCTAAACGACTAAGGTGTGGTCAGTCAGGAGGACATATGGCTGCTCCTCCCTaGAGAGCAGCCCAGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: STLDIKSKRLRCGQSGGHMAAPP*RAAQAG Trigger: GCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCAT...ATGTCCTCCTGACTGACCACACCTTAGTCGTTTAGATTTTATATCCAAAGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTACTCTGTTTCCAACCATaGCTGGTGAATCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LRRQDCTLHYSLRQGNTVLCFQP*LVNLPS Trigger: AGAAGGAAGATTCACCAGGCATGGTTGGAAACAGAG...TACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACGGAAACACTGTAATTTaGAATAAGGAAGGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: KVGREGSGRLRRQDCTLHGNTVI*NKEGLP Trigger: AGGAAGACCTTCCTTATTGCAAATTACAGTGTTTCC...GTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATGGAAACACTGTAATTTaGAATAAGGAAGGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EEARLHFALQSAAGKHCNGNTVI*NKEGLP Trigger: AGGAAGACCTTCCTTATTGCAAATTACAGTGTTTCC...ATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACTTTGGATATAAAATCTAAACGACTAAGGTGTGGTCAGTCAGGAGGACATGGTCACCTTCGGACTTaGATGAACTCCTTGCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: STLDIKSKRLRCGQSGGHGHLRT*MNSLRS Trigger: GCTTCGCAAGGAGTTCATGCAAGTCCGAAGGTGACC...ATGTCCTCCTGACTGACCACACCTTAGTCGTTTAGATTTTATATCCAAAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTTTGGATATAAAATCTAAACGACTAAGGTGTGGTCAGTCAGGAGGACATAGGAAGAGAAGGAAGTaGGCGGTTGAGGAGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: STLDIKSKRLRCGQSGGHRKRRK*AVEEAR Trigger: TCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCT...ATGTCCTCCTGACTGACCACACCTTAGTCGTTTAGATTTTATATCCAAAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR CCA 72 bp | TCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTaGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SPCFLVPMAAPP*RAAQAGAFYQE Trigger: TTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGATGGTCACCTTCGGACTaGCATGAACTCCTTGCGAAG | + |
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Preference number: 3 (lower is better) Translates to: ANGCSSLESSPGRRLLPGWSPSD*HELLAK Trigger: CTTCGCAAGGAGTTCATGCAAGTCCGAAGGTGACCA...TCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAAGAAGGAAGTGGGCGGTaGAGGAGGCAAGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: WAVEEARLHFALQSAAGKEGSGR*RRQDCT Trigger: AGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTC...TTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAACTTGCATGAACTCCTaGCGAAGCCACAGTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CPRKSPCFLVPMAAPPWRTCMNS*RSHSES Trigger: GGACTCACTGTGGCTTCGCAAGGAGTTCATGCAAGT...TCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGAATGAAGGAAGTGGGCGGTaGAGGAGGCAAGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: GLKPQQSSCLCFQPCLVNEGSGR*RRQDCT Trigger: AGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTC...ATTCACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATGAAGGAAGTGGGCGGTaGAGGAGGCAAGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: EEARLHFALQSAAGKHCNEGSGR*RRQDCT Trigger: AGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTC...ATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAGAAGGAAGTGGGCGGTaGAGGAGGCAAGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: LRRQDCTLHYSLRQGNTVEGSGR*RRQDCT Trigger: AGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTC...TACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| 3UTR GCA 72 bp | AGCACTGCGGCTAGTCTCTGGAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTGAAGCTGCTGGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: STAASLWNTNSV*RPFVQLKLLEF Trigger: AAACTCCAGCAGCTTCAGCTGGACAAACGGCCTGCAAACACTGTTTGTATTCCAGAGACTAGCCGCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAGTGGTAGCTCCAGAGCTGCAGATCCTTGGAAGGAGGAGGGAAAGACAGGAATACAAACAGTGTTaGCAGGCCGTTTGTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FRVVAPELQILGRRRERQEYKQC*QAVCPA Trigger: AGCTGGACAAACGGCCTGCAAACACTGTTTGTATTC...CTGTCTTTCCCTCCTCCTTCCAAGGATCTGCAGCTCTGGAGCTACCACTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
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| 3UTR CCA 72 bp | CCAGGAAGGAAAGGTATTCACCCATGTGACATGAAGTaGTCACCTTCGGACTTGCATGAACTCCTTGCGAAG | + |
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Preference number: 3 (lower is better) Translates to: PGRKGIHPCDMK*SPSDLHELLAK Trigger: CTTCGCAAGGAGTTCATGCAAGTCCGAAGGTGACCACTTCATGTCACATGGGTGAATACCTTTCCTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| 3UTR TCA 72 bp | TTCTACCAGGAAGGAAAGGTATTCACCCATGTGACATaGAGTGGTCACCTTCGGACTTGCATGAACTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: FYQEGKVFTHVT*SGHLRTCMNSL Trigger: CAAGGAGTTCATGCAAGTCCGAAGGTGACCACTTCATGTCACATGGGTGAATACCTTTCCTTCCTGGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235990.2 ENSMUST00000236185.2 |
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| CDS-3UTR GCA 90 bp | GTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGACAGCAACAGGAACTaGAGGGAGAGCACCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPMAAPPWRAAQAGAFYQDSNRN*RESTRL Trigger: CAGCCTGGTGCTCTCCCTGCAGTTCCTGTTGCTGTC...CTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR TCA 90 bp | GCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAGGCCGTTTGTCCAGCTaGAGCTGCTGGAGTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ANGCSSLESSPGRRLLPGGRLSS*SCWSFS Trigger: GGAAAAACTCCAGCAGCTTCAGCTGGACAAACGGCC...TCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR CCA 90 bp | CCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGTGCTGCCAGAGACATaGCAGGCTGTGAGGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: PRKSPCFLVPMAAPPWRAVLPET*QAVRAP Trigger: AGGTGCCCTCACAGCCTGCCATGTCTCTGGCAGCAC...TGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
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| CDS-3UTR TCA 90 bp | CAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGGCCGTTTGTCCAGCTaGAGCTGCTGGAGTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QWLLLPGEQPRQAPSTRKGRLSS*SCWSFS Trigger: GGAAAAACTCCAGCAGCTTCAGCTGGACAAACGGCC...CTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR GCA 90 bp | CCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGACAGCAACAGGAACTaGAGGGAGAGCACCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRKSPCFLVPMAAPPWRADSNRN*RESTRL Trigger: CAGCCTGGTGCTCTCCCTGCAGTTCCTGTTGCTGTC...TGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR TCA 90 bp | CAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGCATGTAGGGAGATGCTaGGGGCAAGGTACACAGATG | + |
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Preference number: 4 (lower is better) Translates to: QWLLLPGEQPRQAPSTRKHVGRC*GQGTQM Trigger: CATCTGTGTACCTTGCCCTCAGCATCTCCCTACATG...CTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCGACAGCAACAGGAACTaGAGGGAGAGCACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPWRAAQAGAFYQEGKVFDSNRN*RESTRL Trigger: CAGCCTGGTGCTCTCCCTGCAGTTCCTGTTGCTGTC...GAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCACCCATGTGACCCACGGGGTTCGTGCTaGCTCCCAGAAAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPGRRLLPGRKGIHPCDPRGSC*LPERAE Trigger: CTCTGCCCTTTCTGGGAGGCAGCACGAACCCCGTGG...GTCACATGGGTGAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGGTGGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGCTGTGAGGGCACCTaGAGCCACTCCATCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LGWPQTTAILLPLFPTMPGCEGT*SHSILT Trigger: GGTGAGGATGGAGTGGCTTCAGGTGCCCTCACAGCC...AGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCCACCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACGACAGCAACAGGAACTaGAGGGAGAGCACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRLRRQDCTLHYSLRQGNDSNRN*RESTRL Trigger: CAGCCTGGTGCTCTCCCTGCAGTTCCTGTTGCTGTC...GTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTGAGCAGCCTCAGGGGTaGTCCTCAGTGTTCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLESSPGRRLLPGRKGIEQPQG*SSVFPS Trigger: TGAAGGGAACACTGAGGACCACCCCTGAGGCTGCTC...AATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCGCTCTGAGAAGGAGTTaGCGAACAGGTCATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PPWRAAQAGAFYQEGKVFALRRS*RTGHRT Trigger: TGTCCTATGACCTGTTCGTCAACTCCTTCTCAGAGC...GAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGGGCCGTTTGTCCAGCTaGAGCTGCTGGAGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLKPQQSSCLCFQPCLVGRLSS*SCWSFS Trigger: GGAAAAACTCCAGCAGCTTCAGCTGGACAAACGGCC...CACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGGCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAAGGATTGCAATATCCTaGATGATGAACAGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPCFLVPMAAPPWRAAQARIAIS*MMNSTS Trigger: GCTTGTGCTGTTCATCATCCAGGATATTGCAATCCT...TGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGGTCCCTTTGAACTTATaGAAAAGGAGGTTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSPPASWCQWLLLPGEQVPLNL*KRRLTR Trigger: CCTGGTCAACCTCCTTTTCCATAAGTTCAAAGGGAC...CTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCTGTTTCCAACCATGCCTGGTGAATCTTCCTTCTTGAATGCTGAGCACAGACATGGCAGGCTGTaGGGGCACCTGAAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPTMPGESSFLNAEHRHGRL*GHLKPL Trigger: GAGTGGCTTCAGGTGCCCTCACAGCCTGCCATGTCT...GTGCTCAGCATTCAAGAAGGAAGATTCACCAGGCATGGTTGGAAACAGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPRKSPCFLVPMAAPPWRNTNSV*RPFVQL Trigger: CAGCTGGACAAACGGCCTGCAAACACTGTTTGTATT...TCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVLGSPPASWCQWLLLPGNTNSV*RPFVQL Trigger: CAGCTGGACAAACGGCCTGCAAACACTGTTTGTATT...TCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGGACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAAGGATTGCAATATCCTaGATGATGAACAGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRKSPCFLVPMAAPPWRARIAIS*MMNSTS Trigger: GCTTGTGCTGTTCATCATCCAGGATATTGCAATCCT...TGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCACCCATGTGACATGAAGTGGCATGTAGGGAGATGCTaGGGGCAAGGTACACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRRLLPGRKGIHPCDMKWHVGRC*GQGTQM Trigger: CATCTGTGTACCTTGCCCTCAGCATCTCCCTACATG...CCACTTCATGTCACATGGGTGAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTGTCCCTTTGAACTTATaGAAAAGGAGGTTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLESSPGRRLLPGRKGIVPLNL*KRRLTR Trigger: CCTGGTCAACCTCCTTTTCCATAAGTTCAAAGGGAC...AATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCACCCATGACTGCGGCTAGTCTCTaGAATACAAACAGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEQPRQAPSTRKERYSPMTAASL*NTNSVC Trigger: GCAAACACTGTTTGTATTCCAGAGACTAGCCGCAGT...CATGGGTGAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTGCTCTGAGAAGGAGTTaGCGAACAGGTCATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GREGSGRLRRQDCTLHYSALRRS*RTGHRT Trigger: TGTCCTATGACCTGTTCGTCAACTCCTTCTCAGAGC...ACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGAATCTTATGGAAAAGGAGGTTaGCCAGGCCAGCCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTTAILLPLFPTMPGESYGKGG*PGQPGR Trigger: TCTTCCAGGCTGGCCTGGTCAACCTCCTTTTCCATA...AGATTCACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAAACCACAGCAATCCTCCTGCCTCTGTTTCCAACCATGCCTGGTGAATCTGCTCTGAGAAGGAGTTaGCGAACAGGTCATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQTTAILLPLFPTMPGESALRRS*RTGHRT Trigger: TGTCCTATGACCTGTTCGTCAACTCCTTCTCAGAGC...AGATTCACCAGGCATGGTTGGAAACAGAGGCAGGAGGATTGCTGTGGTTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATTCATGTAGGGAGATGCTaGGGGCAAGGTACACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRQDCTLHYSLRQGNTVIHVGRC*GQGTQM Trigger: CATCTGTGTACCTTGCCCTCAGCATCTCCCTACATG...AATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTCACCCATTCCTCACCTAGTCTCTaGAATACAAACAGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRAAQAGAFYQEGKVFTHSSPSL*NTNSVC Trigger: GCAAACACTGTTTGTATTCCAGAGACTAGGTGAGGA...ATGGGTGAATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTAATTGCTCTGAGAAGGAGTTaGCGAACAGGTCATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRQDCTLHYSLRQGNTVIALRRS*RTGHRT Trigger: TGTCCTATGACCTGTTCGTCAACTCCTTCTCAGAGC...AATTACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACAGTACTGCGGCTAGTCTCTaGAATACAAACAGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GREGSGRLRRQDCTLHYSTAASL*NTNSVC Trigger: GCAAACACTGTTTGTATTCCAGAGACTAGCCGCAGT...ACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGTGGTAGCTCCAGAGCTGCAGATCCTTGGAAGGAGGAGGGAAAGACAGAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRVVAPELQILGRRRERQNTNSV*RPFVQL Trigger: CAGCTGGACAAACGGCCTGCAAACACTGTTTGTATT...CTGTCTTTCCCTCCTCCTTCCAAGGATCTGCAGCTCTGGAGCTACCACTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTAAGGATTGCAATATCCTaGATGATGAACAGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRRKWAVEEARLHFALRIAIS*MMNSTS Trigger: GCTTGTGCTGTTCATCATCCAGGATATTGCAATCCT...TAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCTGTTTCCAACCATGCCTGGTGAATCTTCCTTCTTGAATGCTGAGCACGATGTTGAAGAGGATTaGAATATCCTGGATGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPTMPGESSFLNAEHDVEED*NILDDE Trigger: TTCATCATCCAGGATATTGCAATCCTCTTCAACATC...GTGCTCAGCATTCAAGAAGGAAGATTCACCAGGCATGGTTGGAAACAGAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS GCA 90 bp | GGGAGAACTAAGCCCAGCCAGCCCCAGCACTGCCCACGGGGTTCGTaGTGCCTCCCAGAAAGGGCAGAGGGCAGCCCTGCCTCTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRTKPSQPQHCPRGS*CLPERAEGSPASFL Trigger: AAGGAAAGAGGCAGGGCTGCCCTCTGCCCTTTCTGGGAGGCAGCACGAACCCCGTGGGCAGTGCTGGGGCTGGCTGGGCTTAGTTCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS GCA 90 bp | CCCACGGGGTTCGTGCTGCCTCCCAGAAAGGGCAGAGGGCAGCCCTaGCTCTTTCCTTTAGGAGGCTGGCCTCATCATCCCAGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTGFVLPPRKGRGQP*LFPLGGWPHHPRLS Trigger: GGACAGCCTGGGATGATGAGGCCAGCCTCCTAAAGGAAAGAGGCAGGGCTGCCCTCTGCCCTTTCTGGGAGGCAGCACGAACCCCGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACTTGCATGAACTCCTaGCGAAGCCACAGTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWCQWLLLPGEQPRQAPSTCMNS*RSHSES Trigger: GGACTCACTGTGGCTTCGCAAGGAGTTCATGCAAGT...AGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 |
||
| CDS-3UTR CAA 90 bp | CAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGACTTGCATGAACTCCTaGCGAAGCCACAGTGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QWLLLPGEQPRQAPSTRKTCMNS*RSHSES Trigger: GGACTCACTGTGGCTTCGCAAGGAGTTCATGCAAGT...CTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGGAATACAAACAGTGTTaGCAGGCCGTTTGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPASWCQWLLLPGEQPREYKQC*QAVCPA Trigger: AGCTGGACAAACGGCCTGCAAACACTGTTTGTATTC...CCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS TCA 90 bp | TGGGAAGCAGGACCACAGCTGTGCTGCCAGAGACATGGCAGGCTGTaGGGGCACCTGAAGCCACTCCATCCTCACCTAGTCTCTGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: WEAGPQLCCQRHGRL*GHLKPLHPHLVSGI Trigger: TATTCCAGAGACTAGGTGAGGATGGAGTGGCTTCAGGTGCCCTCACAGCCTGCCATGTCTCTGGCAGCACAGCTGTGGTCCTGCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS TCA 90 bp | TGCCTCTTTCCTTTAGGAGGCTGGCCTCATCATCCCAGGCTGTCCTaGTGGAGCTGGGAAGCAGGACCACAGCTGTGCTGCCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: CLFPLGGWPHHPRLS*WSWEAGPQLCCQRH Trigger: ATGTCTCTGGCAGCACAGCTGTGGTCCTGCTTCCCAGCTCCATCAGGACAGCCTGGGATGATGAGGCCAGCCTCCTAAAGGAAAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCAATGGCTGCTCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGAATGATGGTCCCTTaGAACTTATGGAAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCQWLLLPGEQPRQAPSTRMMVP*NLWKRR Trigger: CCTCCTTTTCCATAAGTTCAAAGGGACCATCATTCT...GGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGAGCAGCCATTGGCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025568.3 ENSMUST00000235990.2 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGAGAATACAAACAGTGTTaGCAGGCCGTTTGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CVLGSPPASWCQWLLLPGEYKQC*QAVCPA Trigger: AGCTGGACAAACGGCCTGCAAACACTGTTTGTATTC...TCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGGACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS CCA 90 bp | CAGGCTGTGAGGGCACCTGAAGCCACTCCATCCTCACCTAGTCTCTaGAATACAAACAGTGTTTGCAGGCCGTTTGTCCAGCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QAVRAPEATPSSPSL*NTNSVCRPFVQLKL Trigger: CAGCTTCAGCTGGACAAACGGCCTGCAAACACTGTTTGTATTCCAGAGACTAGGTGAGGATGGAGTGGCTTCAGGTGCCCTCACAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCTAGGAAGTCCCCCTGCTTCCTGGTGCCAATGGCTGCTCCTCCCTGGATGGAAGACGAAGGTGTaGAAGAACATGAGGAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: CVLGSPPASWCQWLLLPGWKTKV*KNMRKI Trigger: AATTTTCCTCATGTTCTTCAACACCTTCGTCTTCCA...TCCAGGGAGGAGCAGCCATTGGCACCAGGAAGCAGGGGGACTTCCTAGGACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS GCA 90 bp | GAAGCCACTCCATCCTCACCTAGTCTCTGGAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTGAAGCTGCTGGAGTTTTTCCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: EATPSSPSLWNTNSV*RPFVQLKLLEFFHR Trigger: GCGATGGAAAAACTCCAGCAGCTTCAGCTGGACAAACGGCCTGCAAACACTGTTTGTATTCCAGAGACTAGGTGAGGATGGAGTGGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCTGGAGAGCAGCCCAGGCAGGCGCCTTCTACCAGGAAGGAAAGGTATTTGGAAGACGAAGGTGTaGAAGAACATGAGGAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SSLESSPGRRLLPGRKGIWKTKV*KNMRKI Trigger: AATTTTCCTCATGTTCTTCAACACCTTCGTCTTCCA...AATACCTTTCCTTCCTGGTAGAAGGCGCCTGCCTGGGCTGCTCTCCAGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGAAGAGAAGGAAGTGGGCGGTTGAGGAGGCAAGACTGCACTTTGCACTACGAATACAAACAGTGTTaGCAGGCCGTTTGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGREGSGRLRRQDCTLHYEYKQC*QAVCPA Trigger: AGCTGGACAAACGGCCTGCAAACACTGTTTGTATTC...GTAGTGCAAAGTGCAGTCTTGCCTCCTCAACCGCCCACTTCCTTCTCTTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTTTTCCATCGCACGTTCATGACCCAGACATGTAGGGAGATGCTGAGGGCAAGAATGATGGTCCCTTaGAACTTATGGAAAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EFFHRTFMTQTCREMLRARMMVP*NLWKRR Trigger: CCTCCTTTTCCATAAGTTCAAAGGGACCATCATTCT...TGCCCTCAGCATCTCCCTACATGTCTGGGTCATGAACGTGCGATGGAAAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
||
| CDS CCA 90 bp | ATGTTGAAGAGGATTGCAATATCCTGGATGATGAACAGCACAAGCTaGATAACAGGAGCCATTCGGAGTAGCTCTGAGAAGGAGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: MLKRIAISWMMNSTS*ITGAIRSSSEKELT Trigger: CGTCAACTCCTTCTCAGAGCTACTCCGAATGGCTCCTGTTATCCAGCTTGTGCTGTTCATCATCCAGGATATTGCAATCCTCTTCAACAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGAGGCAAGACTGCACTTTGCACTACAGTCTGCGGCAGGGAAACACTGTATGGAAGACGAAGGTGTaGAAGAACATGAGGAAAATT | + |
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Preference number: 5 (lower is better) Translates to: LRRQDCTLHYSLRQGNTVWKTKV*KNMRKI Trigger: AATTTTCCTCATGTTCTTCAACACCTTCGTCTTCCA...TACAGTGTTTCCCTGCCGCAGACTGTAGTGCAAAGTGCAGTCTTGCCTCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS GCA 72 bp | CCCAGCCAGCCCCAGCACTGCCCACGGGGTTCGTGCTaGCTCCCAGAAAGGGCAGAGGGCAGCCCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSQPQHCPRGSC*LPERAEGSPAS Trigger: AGAGGCAGGGCTGCCCTCTGCCCTTTCTGGGAGGCAGCACGAACCCCGTGGGCAGTGCTGGGGCTGGCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
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| CDS CCA 72 bp | CTGGGAAGCAGGACCACAGCTGTGCTGCCAGAGACATaGCAGGCTGTGAGGGCACCTGAAGCCACTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: LGSRTTAVLPET*QAVRAPEATPS Trigger: GGATGGAGTGGCTTCAGGTGCCCTCACAGCCTGCCATGTCTCTGGCAGCACAGCTGTGGTCCTGCTTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
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| CDS TCA 72 bp | GGACCACAGCTGTGCTGCCAGAGACATGGCAGGCTGTaGGGGCACCTGAAGCCACTCCATCCTCACCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: GPQLCCQRHGRL*GHLKPLHPHLV Trigger: GACTAGGTGAGGATGGAGTGGCTTCAGGTGCCCTCACAGCCTGCCATGTCTCTGGCAGCACAGCTGTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
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| CDS CCA 72 bp | AAGGAGGTTGACCAGGCCAGCATGAACAGCACAAGCTaGATAACAGGAGCCATTCGGAGTAGCTCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KEVDQASMNSTS*ITGAIRSSSEK Trigger: CTTCTCAGAGCTACTCCGAATGGCTCCTGTTATCCAGCTTGTGCTGTTCATGCTGGCCTGGTCAACCTCCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235990.2 |
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| CDS CAA 90 bp | GAGATGCTGAGGGCAAGGTACACAGATGTCAGAATGATGGTCCCTTaGAACTTATGGAAAAGGAGGTTGACCAGGCCAGCCTGGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: EMLRARYTDVRMMVP*NLWKRRLTRPAWKT Trigger: CGTCTTCCAGGCTGGCCTGGTCAACCTCCTTTTCCATAAGTTCAAAGGGACCATCATTCTGACATCTGTGTACCTTGCCCTCAGCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS GCA 72 bp | CCATCCTCACCTAGTCTCTGGAATACAAACAGTGTTTaGAGGCCGTTTGTCCAGCTGAAGCTGCTGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PSSPSLWNTNSV*RPFVQLKLLEF Trigger: AAACTCCAGCAGCTTCAGCTGGACAAACGGCCTGCAAACACTGTTTGTATTCCAGAGACTAGGTGAGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236185.2 |
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| CDS CAA 90 bp | ACAGATGTCAGAATGATGGTCCCTTTGAACTTATGGAAAAGGAGGTaGACCAGGCCAGCCTGGAAGACGAAGGTGTTGAAGAACATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TDVRMMVPLNLWKRR*TRPAWKTKVLKNMR Trigger: CCTCATGTTCTTCAACACCTTCGTCTTCCAGGCTGGCCTGGTCAACCTCCTTTTCCATAAGTTCAAAGGGACCATCATTCTGACATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS CCA 72 bp | TTGAACTTATGGAAAAGGAGGTTGACCAGGCCAGCCTaGAAGACGAAGGTGTTGAAGAACATGAGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LNLWKRRLTRPA*KTKVLKNMRKI Trigger: AATTTTCCTCATGTTCTTCAACACCTTCGTCTTCCAGGCTGGCCTGGTCAACCTCCTTTTCCATAAGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS CCA 72 bp | AAAATTATGATGATGTTGAAGAGGATTGCAATATCCTaGATGATGAACAGCACAAGCTGGATAACAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: KIMMMLKRIAIS*MMNSTSWITGA Trigger: GGCTCCTGTTATCCAGCTTGTGCTGTTCATCATCCAGGATATTGCAATCCTCTTCAACATCATCATAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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| CDS CAA 72 bp | AAGGTGTTGAAGAACATGAGGAAAATTATGATGATGTaGAAGAGGATTGCAATATCCTGGATGATGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: KVLKNMRKIMMM*KRIAISWMMNS Trigger: GCTGTTCATCATCCAGGATATTGCAATCCTCTTCAACATCATCATAATTTTCCTCATGTTCTTCAACACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025568.3 ENSMUST00000236099.2 ENSMUST00000236185.2 |
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