Pregenerated sensors for TMEM135 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039428Ensembl transcript IDs: ENSMUST00000041968.11, ENSMUST00000117852.8, ENSMUST00000137723.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGTTGCTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTaGAGGCTTTCCCTGGAAGAGGACACTAGGAAACTTCCCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: CCCWEEAFHVETSGY*RLSLEEDTRKLPLP Trigger: AGGGAGGGGAAGTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CCA 90 bp | ACAGACTGTCCCCAGAGTGCTGTTGCTGGGAAGAAGCATTCCATGTaGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTA | + |
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Preference number: 1 (lower is better) Translates to: TDCPQSAVAGKKHSM*RPLVTGGFPWKRTL Trigger: TAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 90 bp | TCCCTCACAGACCCAAATGTTAACAGACTGTCCCCAGAGTGCTGTTaGTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SLTDPNVNRLSPECC*WEEAFHVETSGYWR Trigger: CCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGTCTGTGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 90 bp | TTCCATTTGTTCCTAACCTGCTATTATCATATAAGGTCACTAGGCTaGCAACCAGCCCATCTGGTCTCGAAGAGAGACAGGACTGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FHLFLTCYYHIRSLG*QPAHLVSKRDRTES Trigger: GCTCTCAGTCCTGTCTCTCTTCGAGACCAGATGGGCTGGTTGGCAGCCTAGTGACCTTATATGATAATAGCAGGTTAGGAACAAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 90 bp | AAAATATCCCTCACAGACCCAAATGTTAACAGACTGTCCCCAGAGTaGTGTTGCTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: KISLTDPNVNRLSPE*CCWEEAFHVETSGY Trigger: GTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGTCTGTGAGGGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR TCA 90 bp | TACACACTGATGAGACAAGAACAGAGAAGCACACCACTGCTTGGCTaGCACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTATTCG | + |
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Preference number: 1 (lower is better) Translates to: YTLMRQEQRSTPLLG*HLNTSFIWCQWMYS Trigger: CGAATACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGTCAGCCAAGCAGTGGTGTGCTTCTCTGTTCTTGTCTCATCAGTGTGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 90 bp | CGTCACTGCATGTCCGTGCGCTACCCTTCTGAGCTGGACAGTCACTaGTATGTTCTCTTTCATGGTAGCTGTTGCTTATTACATTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RHCMSVRYPSELDSH*YVLFHGSCCLLHFS Trigger: TGAAAAATGTAATAAGCAACAGCTACCATGAAAGAGAACATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCAGTGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 90 bp | ACTGAACCACATTCTAACTCAGGGAAGGGCAGGAGCCCTATTGTATaGATCTTATGCTCACTAGCACCTACTGCAGTAATGGGAACACAA | + |
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Preference number: 1 (lower is better) Translates to: TEPHSNSGKGRSPIV*ILCSLAPTAVMGTQ Trigger: TTGTGTTCCCATTACTGCAGTAGGTGCTAGTGAGCATAAGATGCATACAATAGGGCTCCTGCCCTTCCCTGAGTTAGAATGTGGTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CCA 90 bp | CATCTACACACTGATGAGACAAGAACAGAGAAGCACACCACTGCTTaGCTGACACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTA | + |
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Preference number: 1 (lower is better) Translates to: HLHTDETRTEKHTTA*LTPQYQLHLVSMDV Trigger: TACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGTCAGCCAAGCAGTGGTGTGCTTCTCTGTTCTTGTCTCATCAGTGTGTAGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTATTCGGCCTTGAGCTCCGGGGCTGGGACCCATaGTTGTGCCTCTGCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: TPQYQLHLVSMDVFGLELRGWDP*LCLCST Trigger: AGTGCTGCAGAGGCACAAGCATGGGTCCCAGCCCCG...GAGCTCAAGGCCGAATACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CAA 90 bp | ACCCACGTTTGTATCCCTGAAATAAGAATGGCCACTTTCTCCACATaGCTCCACAGCAAAGCAGCAATGCCCCATCTCCAACGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: THVCIPEIRMATFST*LHSKAAMPHLQRPT Trigger: TGTGGGGCGTTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCTTATTTCAGGGATACAAACGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGGGAAGGGCAGGAGCCCTATTGTATGCATCTTATGCTCACTAGCACCTACACCACTGCTTGGCTaGCACCTCAATACCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NSGKGRSPIVCILCSLAPTPLLG*HLNTSF Trigger: GAAGCTGGTATTGAGGTGTCAGCCAAGCAGTGGTGT...AGGTGCTAGTGAGCATAAGATGCATACAATAGGGCTCCTGCCCTTCCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAATGTTAACAGACTGTCCCCAGAGTGCTGTTGCTGGGAAGAAGCATTCCGAGACCTCTGGTTACTaGAGGCTTTCCCTGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TQMLTDCPQSAVAGKKHSETSGY*RLSLEE Trigger: CTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTC...GGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGACCCATGCTTGTGCCTCTGCAGCACTCTGTAACTAAAGGGACTGGTGAGCTGAACATGATACAGTaGGATATTCACACACATGAC | + |
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Preference number: 2 (lower is better) Translates to: LGPMLVPLQHSVTKGTGELNMIQ*DIHTHD Trigger: GTCATGTGTGTGAATATCCCACTGTATCATGTTCAG...CTCACCAGTCCCTTTAGTTACAGAGTGCTGCAGAGGCACAAGCATGGGTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATGTCCGTGCGCTACCCTTCTGAGCTGGACAGTCACTGCTATGTTCTCTTTAGTCCAAACCCAAAATaGCCCTTCAATGTGTTACCA | + |
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Preference number: 2 (lower is better) Translates to: CMSVRYPSELDSHCYVLFSPNPK*PFNVLP Trigger: TGGTAACACATTGAAGGGTCATTTTGGGTTTGGACT...AAAGAGAACATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTCCTGAGAGGAGAAAATaGGGTCCAGGTAGCCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPPERRK*GPGSQA Trigger: CGCCTGGCTACCTGGACCTCATTTTCTCCTCTCAGG...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCACCTGTCGGTTTCCATTTGTTCCTAACCTGCTATTATCATATAAGGTCCCACTTTCTCCACATTaGTCCACAGCAAAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SSTCRFPFVPNLLLSYKVPLSPH*STAKQQ Trigger: TTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGG...GACCTTATATGATAATAGCAGGTTAGGAACAAATGGAAACCGACAGGTGCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTAGGAAACGGGTTTCCTATAGCATaGTATAGCATTTTGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: MWRPLVTGGFPWKRTLGNGFPIA*YSILTK Trigger: TTTTGTCAAAATGCTATACCATGCTATAGGAAACCC...GTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTCCCAGAAAAGCCAAGTaGTCATATCTCAGTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPPRKAK*SYLSQL Trigger: CAGCTGACTGAGATATGATCACTTGGCTTTTCTGGG...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR TCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGTTCAGGAGAAAATGGTaGGACACAGTCAATAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RKDHGLNPCTRDPLQILKFRRKW*DTVNKL Trigger: TAACTTATTGACTGTGTCTCACCATTTTCTCCTGAA...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCACTAGCACCTACTGCAGTAATGGGAACACAAAACACATTTTATTTATAATATGGCAGGTGGGGTaGCAGAACACACGTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: MLTSTYCSNGNTKHILFIIWQVG*QNTRED Trigger: GTCTTCACGTGTGTTCTGCCACCCCACCTGCCATAT...TATAAATAAAATGTGTTTTGTGTTCCCATTACTGCAGTAGGTGCTAGTGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTCGTAACGCAAAATTCTaGGCAAACTCAAGTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPRNAKF*ANSSGS Trigger: AGAACCACTTGAGTTTGCTCAGAATTTTGCGTTACG...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CCA 90 bp | CAATCAGAAATATATTCTGAGAAAAAGATAGGAAGAAGTATGCATCAGCGACTGCCAGAGTGCTGTTGCTaGGAAGAAGCATTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: QSEIYSEKKIGRSMHQRLPECCC*EEAFHV Trigger: CACATGGAATGCTTCTTCCCAGCAACAGCACTCTGG...CAGTCGCTGATGCATACTTCTTCCTATCTTTTTCTCAGAATATATTTCTGATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR GCA 90 bp | CGACTGGGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACCTCACTAGCACCTACTaGAGTAATGGGAACACAAAA | + |
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Preference number: 2 (lower is better) Translates to: RLGYRKPVEYTHRYNLENLTSTY*SNGNTK Trigger: TTTTGTGTTCCCATTACTGCAGTAGGTGCTAGTGAG...GTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCCCAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATCTGAGCAAACTCAAGTaGTTCTGTTACATGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDLSKLK*FCYMMA Trigger: TGCCATCATGTAACAGAACCACTTGAGTTTGCTCAG...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGAAGAAGCATTCCATGTaGAGACCTCTGGTTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: GYRKPVEYTHRYNLENRMKKHSM*RPLVTG Trigger: TCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTT...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CCA 90 bp | CAATCAGAAATATATTCTGAGAAAAAGATAGGAAGAAGTATGCATCAGCGACTGCTGAGTTTGCATAGGTaGGAAGACACAATATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSEIYSEKKIGRSMHQRLLSLHR*EDTIWQ Trigger: CTGCCATATTGTGTCTTCCCACCTATGCAAACTCAG...CAGTCGCTGATGCATACTTCTTCCTATCTTTTTCTCAGAATATATTTCTGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CAA 90 bp | AGAAAGACACAGATTGTCTTTAGAAACGCCAAGTTTTCTTCTTGTTaGCTTGAACAAGCACACTGTCCTCAAGAGTTCAAACTGTATTTC | + |
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Preference number: 2 (lower is better) Translates to: RKTQIVFRNAKFSSC*LEQAHCPQEFKLYF Trigger: GAAATACAGTTTGAACTCTTGAGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGACAATCTGTGTCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR TCA 90 bp | CTTATGCTCACTAGCACCTACTGCAGTAATGGGAACACAAAACACATTTTATTTAAGCTAACAAAAGGATaGGCACACACTTCTGAACAT | + |
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Preference number: 2 (lower is better) Translates to: LMLTSTYCSNGNTKHILFKLTKG*AHTSEH Trigger: ATGTTCAGAAGTGTGTGCTCATCCTTTTGTTAGCTT...AAATAAAATGTGTTTTGTGTTCCCATTACTGCAGTAGGTGCTAGTGAGCATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 72 bp | TCAATGGATGTATTCGGCCTTGAGCTCCCGACCGCCTaGCTCTACCTCCCGGGGCTGGGACCCATGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SMDVFGLELPTA*LYLPGLGPMLV Trigger: CACAAGCATGGGTCCCAGCCCCGGGAGGTAGAGGCAGGCGGTCGGGAGCTCAAGGCCGAATACATCCATTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR TCA 72 bp | CCAGCTTCATCTGGTGTCAATGGATGTATTCGGCCTTaGGCTCCCGACCGCCTGCCTCTACCTCCCGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PASSGVNGCIRP*APDRLPLPPGA Trigger: AGCCCCGGGAGGTAGAGGCAGGCGGTCGGGAGCTCAAGGCCGAATACATCCATTGACACCAGATGAAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 72 bp | CCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATaGCCCATCTCCAACGCCCCACAGCTACAGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: PLSPHCSTAKQQ*PISNAPQLQKS Trigger: GGATTTCTGTAGCTGTGGGGCGTTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 72 bp | TTCAAACTGTATTTCTCGGTCGTCACTGCATGTCCGTaGGCTACCCTTCTGAGCTGGACAGTCACTGCTATG | + |
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Preference number: 3 (lower is better) Translates to: FKLYFSVVTACP*ATLLSWTVTAM Trigger: CATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCAGTGACGACCGAGAAATACAGTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 72 bp | GACCCAAATGTTAACAGACTGTCCCCAGAGTGCTGTTaGTGGGAAGAAGCATTCCATGTGGAGACCTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: DPNVNRLSPECC*WEEAFHVETSG Trigger: ACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 72 bp | CTCACAGACCCAAATGTTAACAGACTGTCCCCAGAGTaGTGTTGCTGGGAAGAAGCATTCCATGTGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: LTDPNVNRLSPE*CCWEEAFHVET Trigger: GGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGTCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CCA 72 bp | TGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTaGAGGCTTTCCCTGGAAGAGGACACTAGGAAACTT | + |
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Preference number: 3 (lower is better) Translates to: WEEAFHVETSGY*RLSLEEDTRKL Trigger: AAGTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CCA 72 bp | CCAAATGTTAACAGACTGTCCCCAGAGTGCTGTTGCTaGGAAGAAGCATTCCATGTGGAGACCTCTGGTTAC | + |
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Preference number: 3 (lower is better) Translates to: PNVNRLSPECCC*EEAFHVETSGY Trigger: GTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTGCTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTGGAGGCTTTGAGTGGGGCCATACTTaGGCAGTACTATTGATTTTC | + |
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Preference number: 3 (lower is better) Translates to: AVAGKKHSMWRPLVTGGFEWGHT*AVLLIF Trigger: GAAAATCAATAGTACTGCCAAAGTATGGCCCCACTC...AAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CAA 90 bp | CGACTGGGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACGGCTGGGACCCATGCTaGTGCCTCTGCAGCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: RLGYRKPVEYTHRYNLENGWDPC*CLCSTL Trigger: CAGAGTGCTGCAGAGGCACAAGCATGGGTCCCAGCC...GTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCCCAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTGCTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTGGAGGCTTTCCAGGCCAGTTTGTTTaGCTAGAAACATCTACACAC | + |
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Preference number: 3 (lower is better) Translates to: AVAGKKHSMWRPLVTGGFPGQFV*LETSTH Trigger: GTGTGTAGATGTTTCTAGCAAAACAAACTGGCCTGG...AAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 72 bp | TTCCTAACCTGCTATTATCATATAAGGTCACTAGGCTaGCAACCAGCCCATCTGGTCTCGAAGAGAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: FLTCYYHIRSLG*QPAHLVSKRDR Trigger: CCTGTCTCTCTTCGAGACCAGATGGGCTGGTTGGCAGCCTAGTGACCTTATATGATAATAGCAGGTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR CCA 72 bp | ACTGATGAGACAAGAACAGAGAAGCACACCACTGCTTaGCTGACACCTCAATACCAGCTTCATCTGGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: TDETRTEKHTTA*LTPQYQLHLVS Trigger: TGACACCAGATGAAGCTGGTATTGAGGTGTCAGCCAAGCAGTGGTGTGCTTCTCTGTTCTTGTCTCATCAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR-3UTR CAA 90 bp | TGCATGTCCGTGCGCTACCCTTCTGAGCTGGACAGTCACTGCTATGTTCTCTTTCCTGTCGGTTTCCATTaGTTCCTAACCTGCTATTAT | + |
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Preference number: 3 (lower is better) Translates to: CMSVRYPSELDSHCYVLFPVGFH*FLTCYY Trigger: ATAATAGCAGGTTAGGAACAAATGGAAACCGACAGG...AAAGAGAACATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 72 bp | ATGTCCGTGCGCTACCCTTCTGAGCTGGACAGTCACTaGTATGTTCTCTTTCATGGTAGCTGTTGCTTATTA | + |
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Preference number: 3 (lower is better) Translates to: MSVRYPSELDSH*YVLFHGSCCLL Trigger: TAATAAGCAACAGCTACCATGAAAGAGAACATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR GCA 72 bp | CATTCTAACTCAGGGAAGGGCAGGAGCCCTATTGTATaGATCTTATGCTCACTAGCACCTACTGCAGTAATG | + |
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Preference number: 3 (lower is better) Translates to: HSNSGKGRSPIV*ILCSLAPTAVM Trigger: CATTACTGCAGTAGGTGCTAGTGAGCATAAGATGCATACAATAGGGCTCCTGCCCTTCCCTGAGTTAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR GCA 72 bp | ACAGCAGCACCTGTCGGTTTCCATTTGTTCCTAACCTaGTATTATCATATAAGGTCACTAGGCTGCCAACCA | + |
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Preference number: 3 (lower is better) Translates to: TAAPVGFHLFLT*YYHIRSLGCQP Trigger: TGGTTGGCAGCCTAGTGACCTTATATGATAATAGCAGGTTAGGAACAAATGGAAACCGACAGGTGCTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CAA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGTGGGCCCCTTCTGTGTaGAACATAATTAACTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RKDHGLNPCTRDPLQILKWAPSV*NIINSS Trigger: TGAAGAGTTAATTATGTTCAACACAGAAGGGGCCCA...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR-3UTR CAA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGGTCCCCAGAGTGCTGTaGCTGGGAAGAAGCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GYRKPVEYTHRYNLENRMVPRVL*LGRSIP Trigger: TGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGAC...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| 3UTR TCA 72 bp | ACTTCTGAACATGATACAGTGGGATATTCACACACATaGCTCTCCCGTACCCTACCCACTCCTAGGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TSEHDTVGYSHT*LSRTLPTPRKI Trigger: TATTTTCCTAGGAGTGGGTAGGGTACGGGAGAGTCATGTGTGTGAATATCCCACTGTATCATGTTCAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCAGAAATATATTCTGAGAAAAAGATAGGAAGAAGTATGCATCAGCGACTGAGGGCAGGAGCCCTATaGTATGCATCTTATGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QSEIYSEKKIGRSMHQRLRAGAL*YASYAH Trigger: GTGAGCATAAGATGCATACAATAGGGCTCCTGCCCT...CAGTCGCTGATGCATACTTCTTCCTATCTTTTTCTCAGAATATATTTCTGATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| 3UTR TCA 72 bp | TTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTaGTTAGTTAGCGGTAGAAAGACACAGATTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FIYDDRELSVNS*LVSGRKTQIVF Trigger: AAAGACAATCTGTGTCTTTCTACCGCTAACTAATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | AGAATGGCCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCCAGGGCGCCCCAAGTaGTCTGCAGGAAGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RMATFSTLLHSKAAMPHLPGRPK*SAGRRP Trigger: GGGTCTCCTTCCTGCAGATCACTTGGGGCGCCCTGG...GAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGACCCATGCTTGTGCCTCTGCAGCACTCTGTAACTAAAGGGACTGGTGAGAGGAAGGAGGCGGACTaGAGGATCTCAGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPMLVPLQHSVTKGTGERKEAD*RISGSS Trigger: ACTGCTTCCTGAGATCCTCCAGTCCGCCTCCTTCCT...CTCACCAGTCCCTTTAGTTACAGAGTGCTGCAGAGGCACAAGCATGGGTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAAATGTTAACAGACTGTCCCCAGAGTGCTGTTGCTGGGAAGAAGCATTCCGCAGGAAGGAGACCCTaGAGGAGGGGTGCCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQMLTDCPQSAVAGKKHSAGRRP*RRGAKC Trigger: ACACTTGGCACCCCTCCTGCAGGGTCTCCTTCCTGC...GGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTCTGTTAACATTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCAACGCCGCAGCATCTGTGCCTTaGTCCATGCTTGCATACGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPHCSTAKQQCPISNAAASVP*SMLAYG Trigger: TCCGTATGCAAGCATGGACCAAGGCACAGATGCTGC...GGCGTTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACCTGTCGGTTTCCATTTGTTCCTAACCTGCTATTATCATATAAGGTCGGGGTGCGTAGATCCTaGGGGACTCCTCCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTCRFPFVPNLLLSYKVGVRRS*GTPPGR Trigger: GCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCC...GACCTTATATGATAATAGCAGGTTAGGAACAAATGGAAACCGACAGGTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | AGAATGGCCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCTCGGCGTTCCCTTGTaGTTCTCCCTCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMATFSTLLHSKAAMPHLLGVPL*FSLFCS Trigger: GGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGAG...GAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCTGGAAGAGGACACTAGGAAACTTCCCCTCCCTTCTCCTTCAGTTCACCTCGGCGTTCCCTTGTaGTTCTCCCTCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLEEDTRKLPLPSPSVHLGVPL*FSLFCS Trigger: GGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGAG...GTGAACTGAAGGAGAAGGGAGGGGAAGTTTCCTAGTGTCCTCTTCCAGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCATGCTTGTGCCTCTGCAGCACTCTGTAACTAAAGGGACTGGTGAGGCTTGTACATGGCCGCTGTaGTGCAGAACAAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPMLVPLQHSVTKGTGEACTWPL*CRTKGL Trigger: AAGTCCTTTTGTTCTGCATCACAGCGGCCATGTACA...AGCCTCACCAGTCCCTTTAGTTACAGAGTGCTGCAGAGGCACAAGCATGGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTAGGAAACAGAGAGGAGCCGGGATaGTTCTGTAAACAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MWRPLVTGGFPWKRTLGNREEPG*FCKQMP Trigger: AGGCATCTGTTTACAGAACCATCCCGGCTCCTCTCT...GTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGGCCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCTGGCCATATAAATTGTaGGCAGCCCTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RMATFSTLLHSKAAMPHLWPYKL*AALSCF Trigger: AAAGCAGGAGAGGGCTGCTCACAATTTATATGGCCA...GAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTACCCTGCAGGAGGGGTaGCAAGTGTGGCCGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPTLQEG*QVWPIS Trigger: CGAGATCGGCCACACTTGGCACCCCTCCTGCAGGGT...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | ATGTGGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTAGGAAACGGTTCTGTAAACAGATaGCTAAACGCAGAGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: MWRPLVTGGFPWKRTLGNGSVNR*LNAEGI Trigger: GATCCCCTCTGCGTTTAGGCATCTGTTTACAGAACC...GTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTTGCTGGGAAGAAGCATTCCATGTGGAGACCTCTGGTTACTGGAGGCTTTCATCATCGACACACCTaGCAAAAACCCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAGKKHSMWRPLVTGGFHHRHT*QKPSHN Trigger: ATTGTGGCTGGGTTTTTGGCAGGTGTGTCGATGATG...AAAGCCTCCAGTAACCAGAGGTCTCCACATGGAATGCTTCTTCCCAGCAACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGAGGAAGGAGGCGGACTaGAGGATCTCAGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKDHGLNPCTRDPLQILKRKEAD*RISGSS Trigger: ACTGCTTCCTGAGATCCTCCAGTCCGCCTCCTTCCT...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGCCAGGGCGCCCCAAGTaGTCTGCAGGAAGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GYRKPVEYTHRYNLENRMPGRPK*SAGRRP Trigger: GGGTCTCCTTCCTGCAGATCACTTGGGGCGCCCTGG...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | CAATCAGAAATATATTCTGAGAAAAAGATAGGAAGAAGTATGCATCAGCGACTGGGGGTGCGTAGATCCTaGGGGACTCCTCCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSEIYSEKKIGRSMHQRLGVRRS*GTPPGR Trigger: GCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCC...CAGTCGCTGATGCATACTTCTTCCTATCTTTTTCTCAGAATATATTTCTGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTTGCATAGGTGGGAAGACACAATATGGCAGGTGGGGTGGCAGAACACACATTTCTTAACGTCGTaGTGGTTCCTCTTGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLHRWEDTIWQVGWQNTHFLTS*WFLLQH Trigger: GTGTTGCAAGAGGAACCATCACGACGTTAAGAAATG...TGTGTTCTGCCACCCCACCTGCCATATTGTGTCTTCCCACCTATGCAAACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTGCAGGAAGGAGACCCTaGAGGAGGGGTGCCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPAGRRP*RRGAKC Trigger: ACACTTGGCACCCCTCCTGCAGGGTCTCCTTCCTGC...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | ACACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTATTCGGCCTTGAGCTCTGCTTGCAGCATCTGTaGCTTGGTCCATGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPQYQLHLVSMDVFGLELCLQHL*LGPCLH Trigger: ATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCA...GAGCTCAAGGCCGAATACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGTCCGTGCGCTACCCTTCTGAGCTGGACAGTCACTGCTATGTTCTCTTTTGTCTTCATAATGCTTaGAGCATCTGTGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CMSVRYPSELDSHCYVLFCLHNA*SICALV Trigger: GACCAAGGCACAGATGCTGCAAGCATTATGAAGACA...AAAGAGAACATAGCAGTGACTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | ATGTGGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTAGGAAACTGTCTTCATAATGCTTaGAGCATCTGTGCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MWRPLVTGGFPWKRTLGNCLHNA*SICALV Trigger: GACCAAGGCACAGATGCTGCAAGCATTATGAAGACA...GTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTTGCATAGGTGGGAAGACACAATATGGCAGGTGGGGTGGCAGAACACATGCTCATGGGCATGGTaGATTCTGTGTTTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLHRWEDTIWQVGWQNTCSWAW*ILCFSP Trigger: TGGAGAAAAACACAGAATCCACCATGCCCATGAGCA...TGTGTTCTGCCACCCCACCTGCCATATTGTGTCTTCCCACCTATGCAAACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGCAGCCTCGATGCCCTTaGAATACATTGTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RKDHGLNPCTRDPLQILKQPRCP*NTLSPP Trigger: TGGTGGAGACAATGTATTTCAAGGGCATCGAGGCTG...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGACCCTGCAGGAGGGGTaGCAAGTGTGGCCGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GYRKPVEYTHRYNLENRMTLQEG*QVWPIS Trigger: CGAGATCGGCCACACTTGGCACCCCTCCTGCAGGGT...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGTGCTTGCAGCATCTGTaGCTTGGTCCATGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKDHGLNPCTRDPLQILKCLQHL*LGPCLH Trigger: ATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCA...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGGGTTCTGTAAACAGATaGCTAAACGCAGAGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RKDHGLNPCTRDPLQILKGSVNR*LNAEGI Trigger: GATCCCCTCTGCGTTTAGGCATCTGTTTACAGAACC...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGATCACGGGCTGAATCCATGTACCCGAGATCCTTTGCAAATCCTAAAGTCTTCTGTTCCACTTTaGCATACGCTGTCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKDHGLNPCTRDPLQILKSSVPL*HTLSLV Trigger: CACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGA...CTTTAGGATTTGCAAAGGATCTCGGGTACATGGATTCAGCCCGTGATCTTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| 3UTR CAA 72 bp | TGTATCCCTGAAATAAGAATGGCCACTTTCTCCACATaGCTCCACAGCAAAGCAGCAATGCCCCATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CIPEIRMATFST*LHSKAAMPHLQ Trigger: TTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCTTATTTCAGGGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | ACACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTATTCGGCCTTGAGCTCAGCCATCTTTGCACCTaGAAAAGAACATGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPQYQLHLVSMDVFGLELSHLCT*KRTCTW Trigger: CCATGTACATGTTCTTTTTCAGGTGCAAAGATGGCT...GAGCTCAAGGCCGAATACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | AAAACACCAATGACATTGAAACTGAGCTATAAAGAGCACAGCCACTGTGGTGAACAAACCTGCCCTTGGTaGGCCTTAAAAGGAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTPMTLKLSYKEHSHCGEQTCPW*ALKGTS Trigger: GGAAGTTCCTTTTAAGGCTCACCAAGGGCAGGTTTG...TTCACCACAGTGGCTGTGCTCTTTATAGCTCAGTTTCAATGTCATTGGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| 3UTR CAA 72 bp | AGGGGGTACCAACTGTCAAACTGGCCCAAAGCTCTTTaGTTCCATAGGATCTTAACCCTTTCTAAAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGYQLSNWPKAL*FHRILTLSKTP Trigger: TGGTGTTTTAGAAAGGGTTAAGATCCTATGGAACAAAAGAGCTTTGGGCCAGTTTGACAGTTGGTACCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | AAATGGTATGAAACCCACGTTTGTATCCCTGAAATAAGAATGGCCACTTTCTCCTGTACATGGCCGCTGTaGTGCAGAACAAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KWYETHVCIPEIRMATFSCTWPL*CRTKGL Trigger: AAGTCCTTTTGTTCTGCATCACAGCGGCCATGTACA...GGAGAAAGTGGCCATTCTTATTTCAGGGATACAAACGTGGGTTTCATACCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTGTGAGTAAGAGTGCGTaGGAATTTCTTCCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPVSKSA*EFLPSP Trigger: TGGGGAAGGAAGAAATTCCCACGCACTCTTACTCAC...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | CTTATGCTCACTAGCACCTACTGCAGTAATGGGAACACAAAACACATTTTATTTGCAGCATCTGTGCCTTaGTCCATGCTTGCATACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLTSTYCSNGNTKHILFAASVP*SMLAYG Trigger: TCCGTATGCAAGCATGGACCAAGGCACAGATGCTGC...AAATAAAATGTGTTTTGTGTTCCCATTACTGCAGTAGGTGCTAGTGAGCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR CCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATAGAGAGGAGCCGGGATaGTTCTGTAAACAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDREEPG*FCKQMP Trigger: AGGCATCTGTTTACAGAACCATCCCGGCTCCTCTCT...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATCATCATCGACACACCTaGCAAAAACCCAGCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDHHRHT*QKPSHN Trigger: ATTGTGGCTGGGTTTTTGGCAGGTGTGTCGATGATG...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | AAAACACCAATGACATTGAAACTGAGCTATAAAGAGCACAGCCACTGTGGTGAATTGTCTCCACCAGCTTaGAAGCTAGGTACATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTPMTLKLSYKEHSHCGELSPPA*KLGTWK Trigger: TTTCCATGTACCTAGCTTCCAAGCTGGTGGAGACAA...TTCACCACAGTGGCTGTGCTCTTTATAGCTCAGTTTCAATGTCATTGGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGTGGCCATATAAATTGTaGGCAGCCCTCTCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYRKPVEYTHRYNLENRMWPYKL*AALSCF Trigger: AAAGCAGGAGAGGGCTGCTCACAATTTATATGGCCA...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATCATTTCTTAACGTCGTaGTGGTTCCTCTTGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDHFLTS*WFLLQH Trigger: GTGTTGCAAGAGGAACCATCACGACGTTAAGAAATG...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR CCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGGTGAGTAAGAGTGCGTaGGAATTTCTTCCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYRKPVEYTHRYNLENRMVSKSA*EFLPSP Trigger: TGGGGAAGGAAGAAATTCCCACGCACTCTTACTCAC...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
||
| CDS-3UTR TCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATAAAGCCAGGAGTCCATaGGTAGAATTTTCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDKARSP*VEFSKD Trigger: ATCCTTGGAAAATTCTACTCATGGACTCCTGGCTTT...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR TCA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATAGCCATCTTTGCACCTaGAAAAGAACATGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDSHLCT*KRTCTW Trigger: CCATGTACATGTTCTTTTTCAGGTGCAAAGATGGCT...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACCTGTCGGTTTCCATTTGTTCCTAACCTGCTATTATCATATAAGGTCTGCGTGGAAACAAATTaGTGTAGAGATGGAATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSTCRFPFVPNLLLSYKVCVETN*CRDGID Trigger: ATCTATTCCATCTCTACAGCAATTTGTTTCCACGCA...GACCTTATATGATAATAGCAGGTTAGGAACAAATGGAAACCGACAGGTGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTATAGATGATCGTATCTaGTTGAGGAAAATAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPIDDRI*LRKIGN Trigger: GTTCCCTATTTTCCTCAAGCAGATACGATCATCTAT...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR CCA 90 bp | GGATATAGAAAACCTGTAGAGTACACACATAGGTACAACTTAGAAAACAGGATGTTTTCTCCACCAGCTTaGAAGCTAGGTACATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GYRKPVEYTHRYNLENRMFSPPA*KLGTWK Trigger: TTTCCATGTACCTAGCTTCCAAGCTGGTGGAGAAAA...CATCCTGTTTTCTAAGTTGTACCTATGTGTGTACTCTACAGGTTTTCTATATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| 3UTR CAA 72 bp | TTGTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTaGAACAAGCACACTGTCCTCAAGAGTTCAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LSLETPSFLLVC*NKHTVLKSSNC Trigger: ACAGTTTGAACTCTTGAGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| 3UTR CAA 72 bp | CAGATTGTCTTTAGAAACGCCAAGTTTTCTTCTTGTTaGCTTGAACAAGCACACTGTCCTCAAGAGTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QIVFRNAKFSSC*LEQAHCPQEFK Trigger: TTTGAACTCTTGAGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGACAATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR GCA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTCACGATAAACCTAAGTaGAGAAAATGTAAAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPHDKPK*RKCKAF Trigger: AAAGGCTTTACATTTTCTGCACTTAGGTTTATCGTG...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | CTCCAGCTTGCGCTTCCGGAGAACAGCTGCAATCAGGTACAGGGGTaGGTAGATCCTGAGGGACTCCTCCAGGGCGCCCCAAGTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: LQLALPENSCNQVQG*VDPEGLLQGAPSDL Trigger: CAGATCACTTGGGGCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCCTGTACCTGATTGCAGCTGTTCTCCGGAAGCGCAAGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 ENSMUST00000137723.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCAACGCCTGCAGCATCTGTGCCTaGGTCCATGCTTGCATACGG | + |
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Preference number: 5 (lower is better) Translates to: PLSPHCSTAKQQCPISNACSICA*VHACIR Trigger: CCGTATGCAAGCATGGACCAAGGCACAGATGCTGCA...GGCGTTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | CAGTTTGTACAGGTAATACTCCAGCTTGCGCTTCCGGAGAACAGCTaGAATCAGGTACAGGGGTGCGTAGATCCTGAGGGACTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QFVQVILQLALPENS*NQVQGCVDPEGLLQ Trigger: CTGGAGGAGTCCCTCAGGATCTACGCACCCCTGTACCTGATTGCAGCTGTTCTCCGGAAGCGCAAGCTGGAGTATTACCTGTACAAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 ENSMUST00000137723.2 |
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| CDS-3UTR CAA 90 bp | AGAATGGCCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCGCTCTCGGCGTTCCCTaGTGCTTCTCCCTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RMATFSTLLHSKAAMPHLALGVP*CFSLFC Trigger: ACAGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGC...GAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR CAA 90 bp | CCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCAACGCCCCAGCCTCGATGCCCTaGAAATACATTGTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLSPHCSTAKQQCPISNAPASMP*KYIVST Trigger: GGTGGAGACAATGTATTTCAAGGGCATCGAGGCTGG...GGCGTTGGAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | GTCCGAACCAGAGCGATTATGCTCATTGCTCTCGGCGTTCCCTTGTaGTTCTCCCTCTTCTGTTCCACTTTGGCATACGCTGTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VRTRAIMLIALGVPL*FSLFCSTLAYAVSG Trigger: ACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS GCA 90 bp | GCATACGGAGTCCACGAGAGTCCGAACCAGAGCGATTATGCTCATTaGTCTCGGCGTTCCCTTGTGCTTCTCCCTCTTCTGTTCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AYGVHESPNQSDYAH*SRRSLVLLPLLFHF Trigger: AAAGTGGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACTCCGTATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS-3UTR CAA 90 bp | CTTTCCCTGGAAGAGGACACTAGGAAACTTCCCCTCCCTTCTCCTTCAGTTCACTGCAGCATCTGTGCCTaGGTCCATGCTTGCATACGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLEEDTRKLPLPSPSVHCSICA*VHACIR Trigger: CCGTATGCAAGCATGGACCAAGGCACAGATGCTGCA...GTGAACTGAAGGAGAAGGGAGGGGAAGTTTCCTAGTGTCCTCTTCCAGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| CDS CCA 90 bp | GTAGGAAATGCAGTTGTCTTCATAATGCTTGCAGCATCTGTGCCTTaGTCCATGCTTGCATACGGAGTCCACGAGAGTCCGAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGNAVVFIMLAASVP*SMLAYGVHESPNQS Trigger: GCTCTGGTTCGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACTGCATTTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS TCA 90 bp | GGTGTGACAACTGTGTACCGTGGGTCTAGTCTGGGGATGAAGTTGTaGAACTCTCTAGATGCGCCAGTACCAAACACATCCAGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVTTVYRGSSLGMKL*NSLDAPVPNTSRAF Trigger: AAAAGCCCTGGATGTGTTTGGTACTGGCGCATCTAGAGAGTTTCACAACTTCATCCCCAGACTAGACCCACGGTACACAGTTGTCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | AGTTGTCTTCATAATGCTTGCAGCATCTGTGCCTTGGTCCATGCTTaGATACGGAGTCCACGAGAGTCCGAACCAGAGCGATTATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLHNACSICALVHA*IRSPRESEPERLCS Trigger: TGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS-3UTR CAA 90 bp | ACACCTCAATACCAGCTTCATCTGGTGTCAATGGATGTATTCGGCCTTGAGCTCCTCTTCTGTTCCACTTaGGCATACGCTGTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPQYQLHLVSMDVFGLELLFCST*AYAVSG Trigger: ACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGAG...GAGCTCAAGGCCGAATACATCCATTGACACCAGATGAAGCTGGTATTGAGGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| CDS-3UTR CAA 90 bp | AGAATGGCCACTTTCTCCACATTGCTCCACAGCAAAGCAGCAATGCCCCATCTCCCTTTTAAGCCATCTTaGCACCTGAAAAAGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: RMATFSTLLHSKAAMPHLPFKPS*HLKKNM Trigger: CATGTTCTTTTTCAGGTGCAAAGATGGCTTAAAAGG...GAGATGGGGCATTGCTGCTTTGCTGTGGAGCAATGTGGAGAAAGTGGCCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR CAA 90 bp | ATGTGGAGACCTCTGGTTACTGGAGGCTTTCCCTGGAAGAGGACACTAGGAAACCCTTTTAAGCCATCTTaGCACCTGAAAAAGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: MWRPLVTGGFPWKRTLGNPFKPS*HLKKNM Trigger: CATGTTCTTTTTCAGGTGCAAAGATGGCTTAAAAGG...GTTTCCTAGTGTCCTCTTCCAGGGAAAGCCTCCAGTAACCAGAGGTCTCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117852.8 |
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| CDS TCA 90 bp | TATCTGCTTGAGGAAAATAGGGAACCTTTCCAGCCTCGATGCCCTTaGAATACATTGTCTCCACCAGCTTGGAAGCTAGGTACATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLLEENREPFQPRCP*NTLSPPAWKLGTWK Trigger: TTTCCATGTACCTAGCTTCCAAGCTGGTGGAGACAATGTATTTCAAGGGCATCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | TGCGTGGAAACAAATTGCTGTAGAGATGGAATAGATGATCGTATCTaGTTGAGGAAAATAGGGAACCTTTCCAGCCTCGATGCCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CVETNCCRDGIDDRI*LRKIGNLSSLDALE Trigger: TTCAAGGGCATCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTCCACGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR CAA 90 bp | GTCTTTAGAAACGCCAAGTTTTCTTCTTGTTTGCTTGAACAAGCACACTGTCCTCTCTTCTGTTCCACTTaGGCATACGCTGTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFRNAKFSSCLLEQAHCPLFCST*AYAVSG Trigger: ACCAGAGACAGCGTATGCCAAAGTGGAACAGAAGAG...AGGACAGTGTGCTTGTTCAAGCAAACAAGAAGAAAACTTGGCGTTTCTAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 90 bp | TGGTCGCAAGTTCTGAACTTCCATAACAGCTGCGTGGAAACAAATTaGTGTAGAGATGGAATAGATGATCGTATCTGCTTGAGGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: WSQVLNFHNSCVETN*CRDGIDDRICLRKI Trigger: TATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTCCACGCAGCTGTTATGGAAGTTCAGAACTTGCGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS-3UTR CAA 90 bp | GAGATCTATTTGCCTTTATTTATGATGACAGGGAGCTGTCAGTCAATTCCTGATGATGATCGTATCTGCTaGAGGAAAATAGGGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: EIYLPLFMMTGSCQSIPDDDRIC*RKIGNL Trigger: AAGGTTCCCTATTTTCCTCAAGCAGATACGATCATC...ATCAGGAATTGACTGACAGCTCCCTGTCATCATAAATAAAGGCAAATAGATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 72 bp | GCGCTTCCGGAGAACAGCTGCAATCAGGTACAGGGGTaGGTAGATCCTGAGGGACTCCTCCAGGGCGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPENSCNQVQG*VDPEGLLQGAP Trigger: TGGGGCGCCCTGGAGGAGTCCCTCAGGATCTACGCACCCCTGTACCTGATTGCAGCTGTTCTCCGGAAGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 ENSMUST00000137723.2 |
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| CDS GCA 72 bp | GTCCACGAGAGTCCGAACCAGAGCGATTATGCTCATTaGTCTCGGCGTTCCCTTGTGCTTCTCCCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VHESPNQSDYAH*SRRSLVLLPLL Trigger: CAGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS GCA 72 bp | CATAATGCTTGCAGCATCTGTGCCTTGGTCCATGCTTaGATACGGAGTCCACGAGAGTCCGAACCAGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: HNACSICALVHA*IRSPRESEPER Trigger: TCGCTCTGGTTCGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS GCA 72 bp | AAAAGAGAGAGGAGCCGGGATGGTTCTGTAAACAGATaGCTAAACGCAGAGGGGATCCGGAGACAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: KRERSRDGSVNR*LNAEGIRRQHW Trigger: CCAGTGCTGTCTCCGGATCCCCTCTGCGTTTAGGCATCTGTTTACAGAACCATCCCGGCTCCTCTCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS GCA 72 bp | ATCGACACACCTGCCAAAAACCCAGCCACAATAGCATaGAGCTCGTCATCCAGATTCCTGATCCAGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IDTPAKNPATIA*SSSSRFLIQRR Trigger: CCTGCGCTGGATCAGGAATCTGGATGACGAGCTGCATGCTATTGTGGCTGGGTTTTTGGCAGGTGTGTCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS CAA 72 bp | AGTCCACGAGAGTCCGAACCAGAGCGATTATGCTCATaGCTCTCGGCGTTCCCTTGTGCTTCTCCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRESEPERLCS*LSAFPCASPSS Trigger: AGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS CAA 90 bp | TGCATACGGAGTCCACGAGAGTCCGAACCAGAGCGATTATGCTCATaGCTCTCGGCGTTCCCTTGTGCTTCTCCCTCTTCTGTTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CIRSPRESEPERLCS*LSAFPCASPSSVPL Trigger: AAGTGGAACAGAAGAGGGAGAAGCACAAGGGAACGCCGAGAGCAATGAGCATAATCGCTCTGGTTCGGACTCTCGTGGACTCCGTATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS CCA 72 bp | GCAGTTGTCTTCATAATGCTTGCAGCATCTGTGCCTTaGTCCATGCTTGCATACGGAGTCCACGAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVVFIMLAASVP*SMLAYGVHESP Trigger: CGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS CAA 72 bp | TGCAGTTGTCTTCATAATGCTTGCAGCATCTGTGCCTaGGTCCATGCTTGCATACGGAGTCCACGAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSCLHNACSICA*VHACIRSPRES Trigger: GGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS CAA 90 bp | AGTAGGAAATGCAGTTGTCTTCATAATGCTTGCAGCATCTGTGCCTaGGTCCATGCTTGCATACGGAGTCCACGAGAGTCCGAACCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRKCSCLHNACSICA*VHACIRSPRESEPE Trigger: CTCTGGTTCGGACTCTCGTGGACTCCGTATGCAAGCATGGACCAAGGCACAGATGCTGCAAGCATTATGAAGACAACTGCATTTCCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041968.11 ENSMUST00000117852.8 |
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| CDS TCA 72 bp | ACTGTGTACCGTGGGTCTAGTCTGGGGATGAAGTTGTaGAACTCTCTAGATGCGCCAGTACCAAACACATCC | + |
|
Preference number: 6 (lower is better) Translates to: TVYRGSSLGMKL*NSLDAPVPNTS Trigger: GGATGTGTTTGGTACTGGCGCATCTAGAGAGTTTCACAACTTCATCCCCAGACTAGACCCACGGTACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS TCA 72 bp | GAGGAAAATAGGGAACCTTTCCAGCCTCGATGCCCTTaGAATACATTGTCTCCACCAGCTTGGAAGCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: EENREPFQPRCP*NTLSPPAWKLG Trigger: ACCTAGCTTCCAAGCTGGTGGAGACAATGTATTTCAAGGGCATCGAGGCTGGAAAGGTTCCCTATTTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS CAA 72 bp | AATTGCTGTAGAGATGGAATAGATGATCGTATCTGCTaGAGGAAAATAGGGAACCTTTCCAGCCTCGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: NCCRDGIDDRIC*RKIGNLSSLDA Trigger: GGCATCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS CAA 90 bp | GTGGAAACAAATTGCTGTAGAGATGGAATAGATGATCGTATCTGCTaGAGGAAAATAGGGAACCTTTCCAGCCTCGATGCCCTTGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: VETNCCRDGIDDRIC*RKIGNLSSLDALEI Trigger: TATTTCAAGGGCATCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 72 bp | ACAAATTGCTGTAGAGATGGAATAGATGATCGTATCTaGTTGAGGAAAATAGGGAACCTTTCCAGCCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: TNCCRDGIDDRI*LRKIGNLSSLD Trigger: ATCGAGGCTGGAAAGGTTCCCTATTTTCCTCAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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| CDS GCA 72 bp | GTTCTGAACTTCCATAACAGCTGCGTGGAAACAAATTaGTGTAGAGATGGAATAGATGATCGTATCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLNFHNSCVETN*CRDGIDDRICL Trigger: CAAGCAGATACGATCATCTATTCCATCTCTACAGCAATTTGTTTCCACGCAGCTGTTATGGAAGTTCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041968.11 |
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