Pregenerated sensors for TMEM134 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024845Ensembl transcript IDs: ENSMUST00000135257.11, ENSMUST00000137579.6, ENSMUST00000138593.10, ENSMUST00000139987.10, ENSMUST00000140267.10, ENSMUST00000140405.10, ENSMUST00000148807.11, ENSMUST00000150627.11, ENSMUST00000151401.11, ENSMUST00000153654.11, ENSMUST00000169055.10
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGCCAGGCAGGAACCAGGGTACCAGCCTCTAGGCCTGGTGCCTaGATCACTTCTTGGTGCCCTTGGCTAGGGGGCAGTGTTGAATCT | + |
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Preference number: 1 (lower is better) Translates to: QSQAGTRVPASRPGA*ITSWCPWLGGSVES Trigger: AGATTCAACACTGCCCCCTAGCCAAGGGCACCAAGAAGTGATGCAGGCACCAGGCCTAGAGGCTGGTACCCTGGTTCCTGCCTGGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR TCA 90 bp | TCTTGGTGCCCTTGGCTAGGGGGCAGTGTTGAATCTCCTCAGGGATaGAGGCAGACAGGGTGGGACTACTTCATCCAGCTCTGCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SWCPWLGGSVESPQG*RQTGWDYFIQLCPG Trigger: CCCAGGGCAGAGCTGGATGAAGTAGTCCCACCCTGTCTGCCTTCATCCCTGAGGAGATTCAACACTGCCCCCTAGCCAAGGGCACCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR GCA 90 bp | TGTGCTGCTCGGCTGAGAAGCCGTGATCCTACCCCCTCCTCTCCCTaGTTCTCCCAACCTCTGGGTCTAGAAAATAGGGCAGTGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CAARLRSRDPTPSSP*FSQPLGLENRAVGV Trigger: CACACCCACTGCCCTATTTTCTAGACCCAGAGGTTGGGAGAAGCAGGGAGAGGAGGGGGTAGGATCACGGCTTCTCAGCCGAGCAGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR TCA 90 bp | TTCATCCAGCTCTGCCCTGGGCATAATGGTGACCATGGGCACACCTaGGGCCATCCAGGTTGTCCTTGGGAAGTTGGTGGTCCTCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: FIQLCPGHNGDHGHT*GHPGCPWEVGGPLE Trigger: CTCTAGAGGACCACCAACTTCCCAAGGACAACCTGGATGGCCTCAGGTGTGCCCATGGTCACCATTATGCCCAGGGCAGAGCTGGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR GCA 90 bp | GCAAATTCAAAGGGGCCTGGTGGTTGTGAGGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ANSKGPGGCEGPRGL*LPGERNRTRCRLEE Trigger: TTCCTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTCACAACCACCAGGCCCCTTTGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR GCA 90 bp | CTTTACACACAGTCCCTCTGTAGGAGGGGACTGTGGTCGTTAGTGTaGTGGGCCAGGCTTGCTGGCCCAGGAAAGTGCAACTGTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LYTQSLCRRGLWSLV*WARLAGPGKCNCPC Trigger: ACAAGGACAGTTGCACTTTCCTGGGCCAGCAAGCCTGGCCCAGCACACTAACGACCACAGTCCCCTCCTACAGAGGGACTGTGTGTAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR GCA 90 bp | GGAGGTGACCTGAGGCCTTGGATCACTGGTGAGCCACTGGCCAGTTaGAGCTCACTTCTCAAAGTAGGGCAGGTAGAAGAATTGGAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: GGDLRPWITGEPLAS*SSLLKVGQVEELEA Trigger: GGCTTCCAATTCTTCTACCTGCCCTACTTTGAGAAGTGAGCTGCAACTGGCCAGTGGCTCACCAGTGATCCAAGGCCTCAGGTCACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTGTGGACACGTGGAGGTaGCCTGAGGCCTTGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: RVPGASAFQVKGTEPGVGVDTWR*PEALDH Trigger: GTGATCCAAGGCCTCAGGTCACCTCCACGTGTCCAC...ACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGGGCCAGGCTTGCTGGCCCAGGAAAGTGCAACTGTCCTTGTTGGAAATAGTGGACACGTGGAGGTaGCCTGAGGCCTTGGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLGQACWPRKVQLSLLEIVDTWR*PEALDH Trigger: GTGATCCAAGGCCTCAGGTCACCTCCACGTGTCCAC...TATTTCCAACAAGGACAGTTGCACTTTCCTGGGCCAGCAAGCCTGGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PRGLCLPGERNRTRCRLEPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...CTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGTAGGGCAGGTAGAAGAATTGGAAGCCCCGGCGGCCCTTGACAGCGCACCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LKVGQVEELEAPAALDSAPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...TGCGCTGTCAAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCCTACTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGGTGGACACGTGGAGGTaGCCTGAGGCCTTGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: PGWHALNFLSKFKGAWWLVDTWR*PEALDH Trigger: GTGATCCAAGGCCTCAGGTCACCTCCACGTGTCCAC...CAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PGWHALNFLSKFKGAWWLGPRGL*LPGERN Trigger: GTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACC...CAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGTGAGGGTCCCAGGGGCCCAAAGAAGATGGCACTaGAGACACCTGGAGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KLPEQIQRGLVVVRVPGAQRRWH*RHLERG Trigger: CCCCCTCTCCAGGTGTCTCCAGTGCCATCTTCTTTG...GGCCCCTGGGACCCTCACAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148807.11 |
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| 3UTR CAA 90 bp | CTGGCCAGTTGCAGCTCACTTCTCAAAGTAGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTTGACAGCGCAGTAGATGAAGATCAC | + |
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Preference number: 2 (lower is better) Translates to: LASCSSLLKVGQVEE*EAPAALDSAVDEDH Trigger: GTGATCTTCATCTACTGCGCTGTCAAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCCTACTTTGAGAAGTGAGCTGCAACTGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| 3UTR-3UTR CCA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCCTGGGCCAGGCTTGCTaGCCCAGGAAAGTGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: AIFPGWHALNFLSKFKGALGQAC*PRKVQL Trigger: CAGTTGCACTTTCCTGGGCCAGCAAGCCTGGCCCAG...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGACTACTTCATCCAGCTCTGCCCTGGGCATAATGGTGACCATGGGCACTTGTCCTTGGGAAGTTaGTGGTCCTCTAGAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GWDYFIQLCPGHNGDHGHLSLGS*WSSRAL Trigger: TAGAGCTCTAGAGGACCACCAACTTCCCAAGGACAA...GTGCCCATGGTCACCATTATGCCCAGGGCAGAGCTGGATGAAGTAGTCCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCAGGCTTGCTGGCCCAGGAAAGTGCAACTGTCCTTGTTGGAAATAATTCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGQACWPRKVQLSLLEIIPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...AATTATTTCCAACAAGGACAGTTGCACTTTCCTGGGCCAGCAAGCCTGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | ACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACAGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TKLHQPRSPEPRNKLRHTGPRGL*LPGERN Trigger: GTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACC...TGTGTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGGTGGACACGTGGAGGTaGCCTGAGGCCTTGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: PFISTKLHQPRSPEPRNKVDTWR*PEALDH Trigger: GTGATCCAAGGCCTCAGGTCACCTCCACGTGTCCAC...CTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAGTGGACACGTGGAGGTaGCCTGAGGCCTTGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: TLLLAQNYTNPGVQNPGIVDTWR*PEALDH Trigger: GTGATCCAAGGCCTCAGGTCACCTCCACGTGTCCAC...TATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | AGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: STKLHQPRSPEPRNKLRHPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...GTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RGNIPRLACSKLPEQIQRPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...CCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PFISTKLHQPRSPEPRNKGPRGL*LPGERN Trigger: GTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACC...CTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | AATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: NYPFISTKLHQPRSPEPRGPRGL*LPGERN Trigger: GTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACC...CCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | ATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: ITLLLAQNYTNPGVQNPGGPRGL*LPGERN Trigger: GTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACC...TCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR GCA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCGCTGGCCCAGGAAAGTaGAACTGTCCTTGTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AIFPGWHALNFLSKFKGAAGPGK*NCPCWK Trigger: TTTCCAACAAGGACAGTTGCACTTTCCTGGGCCAGC...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACACCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TKLHQPRSPEPRNKLRHTPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...TGTGTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: YPFISTKLHQPRSPEPRNPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGCCTCTGCCTTCCAGGTaGAAGGAACAGAACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PFISTKLHQPRSPEPRNKPLPSR*KEQNQV Trigger: CACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGG...CTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR-3UTR CCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATCCGGCACAAAGAAGATaGCACTGGAGACACCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: YPFISTKLHQPRSPEPRNPAQRR*HWRHLA Trigger: GGCTAGGTGTCTCCAGTGCCATCTTCTTTGTGCCGG...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140405.10 |
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| 3UTR-3UTR GCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATGAGCCACTGGCCAGTTaGAGCTCACTTCTCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: YPFISTKLHQPRSPEPRNEPLAS*SSLLKV Trigger: TACTTTGAGAAGTGAGCTGCAACTGGCCAGTGGCTC...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| 3UTR-3UTR CCA 90 bp | ACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATACAAAGAAGATGGCACTaGAGACACCTAGCCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: TLLLAQNYTNPGVQNPGIQRRWH*RHLAPT Trigger: TGTTGGGGCTAGGTGTCTCCAGTGCCATCTTCTTTG...TATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140405.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTGAGCCACTGGCCAGTTaGAGCTCACTTCTCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLLAQNYTNPGVQNPGISEPLAS*SSLLKV Trigger: TACTTTGAGAAGTGAGCTGCAACTGGCCAGTGGCTC...ACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| 3UTR GCA 72 bp | AAGGGGCCTGGTGGTTGTGAGGGTCCCAGGGGCCTCTaGCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: KGPGGCEGPRGL*LPGERNRTRCR Trigger: CCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTCACAACCACCAGGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| 3UTR TCA 72 bp | GGCTCTAAGCATCGCCTTGTTACTGTGCTGCTCGGCTaGGAAGCCGTGATCCTACCCCCTCCTCTCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GSKHRLVTVLLG*EAVILPPPLPA Trigger: AGCAGGGAGAGGAGGGGGTAGGATCACGGCTTCTCAGCCGAGCAGCACAGTAACAAGGCGATGCTTAGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| 3UTR CCA 72 bp | GTCCTTTACACACAGTCCCTCTGTAGGAGGGGACTGTaGTCGTTAGTGTGCTGGGCCAGGCTTGCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLYTQSLCRRGL*SLVCWARLAGP Trigger: TGGGCCAGCAAGCCTGGCCCAGCACACTAACGACCACAGTCCCCTCCTACAGAGGGACTGTGTGTAAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR CCA 72 bp | GTACCAGCCTCTAGGCCTGGTGCCTGCATCACTTCTTaGTGCCCTTGGCTAGGGGGCAGTGTTGAATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VPASRPGACITS*CPWLGGSVESP Trigger: AGGAGATTCAACACTGCCCCCTAGCCAAGGGCACCAAGAAGTGATGCAGGCACCAGGCCTAGAGGCTGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR TCA 72 bp | CCTTGGCTAGGGGGCAGTGTTGAATCTCCTCAGGGATaGAGGCAGACAGGGTGGGACTACTTCATCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PWLGGSVESPQG*RQTGWDYFIQL Trigger: GAGCTGGATGAAGTAGTCCCACCCTGTCTGCCTTCATCCCTGAGGAGATTCAACACTGCCCCCTAGCCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR TCA 72 bp | CATCACTTCTTGGTGCCCTTGGCTAGGGGGCAGTGTTaGATCTCCTCAGGGATGAAGGCAGACAGGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HHFLVPLARGQC*ISSGMKADRVG Trigger: TCCCACCCTGTCTGCCTTCATCCCTGAGGAGATTCAACACTGCCCCCTAGCCAAGGGCACCAAGAAGTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR CCA 72 bp | GCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTaGAGGAATACCCTGTGGACACGTGGAGGTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFQVKGTEPGVG*RNTLWTRGGDL Trigger: CAGGTCACCTCCACGTGTCCACAGGGTATTCCTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| 3UTR CCA 72 bp | GGGACTGTGGTCGTTAGTGTGCTGGGCCAGGCTTGCTaGCCCAGGAAAGTGCAACTGTCCTTGTTGGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GTVVVSVLGQAC*PRKVQLSLLEI Trigger: TATTTCCAACAAGGACAGTTGCACTTTCCTGGGCCAGCAAGCCTGGCCCAGCACACTAACGACCACAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR GCA 72 bp | CTGAGGCCTTGGATCACTGGTGAGCCACTGGCCAGTTaGAGCTCACTTCTCAAAGTAGGGCAGGTAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRPWITGEPLAS*SSLLKVGQVEE Trigger: TTCTTCTACCTGCCCTACTTTGAGAAGTGAGCTGCAACTGGCCAGTGGCTCACCAGTGATCCAAGGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAGTGCAACTGTCCTTGTaGGAAATAATTACCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ITLLLAQNYTNPGVQNPGVQLSL*EIITLL Trigger: TAAAAGGGTAATTATTTCCAACAAGGACAGTTGCAC...TCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAAAAGTGCAACTGTCCTaGTTGGAAATAATTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ITLLLAQNYTNPGVQNPGKVQLS*LEIITL Trigger: AAGGGTAATTATTTCCAACAAGGACAGTTGCACTTT...TCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGGCCCTGACCTGGTGCTaGCTCCCCCATCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGASAFQVKGTEPGVGWRALTWC*LPHPAP Trigger: CGGAGCCGGATGGGGGAGTCAGCACCAGGTCAGGGC...CCTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000137579.6 ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGACTGCGAGCTGGTGCTaGCTCCCCCATCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLCLPGERNRTRCRLETASWC*LPHPAP Trigger: CGGAGCCGGATGGGGGAGTCAGCACCAGCTCGCAGT...CTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139987.10 |
||
| CDS-3UTR GCA 90 bp | CTAGTGCTACAGAGCCAGGCAGGAACCAGGGTACCAGCCTCTAGGCCTGGTGCCGTGCTGAAGGACCACTaGGAGCTGCGGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: LVLQSQAGTRVPASRPGAVLKDH*ELRTDM Trigger: CATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC...GGCACCAGGCCTAGAGGCTGGTACCCTGGTTCCTGCCTGGCTCTGTAGCACTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGGGCTCCGGAGAGGCCTaGGCTCCGTCCTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPRGLCLPGERNRTRCRGSGEA*APSSSF Trigger: AAATGATGAGGACGGAGCCCAGGCCTCTCCGGAGCC...CCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTGTGCTGAAGGACCACTaGGAGCTGGTGCTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVPGASAFQVKGTEPGVGVLKDH*ELVLTP Trigger: GGGAGTCAGCACCAGCTCGCAGTGGTCCTTCAGCAC...ACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139987.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGACTACTTCATCCAGCTCTGCCCTGGGCATAATGGTGACCATGGGCACGGCTCCGGAGAGGCCTaGGCTCCGTCCTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GWDYFIQLCPGHNGDHGHGSGEA*APSSSF Trigger: AAATGATGAGGACGGAGCCCAGGCCTCTCCGGAGCC...GTGCCCATGGTCACCATTATGCCCAGGGCAGAGCTGGATGAAGTAGTCCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGCAAAGAAGATGGCACTaGAGACACCTGGCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EGPRGLCLPGERNRTRCRQRRWH*RHLALT Trigger: GGTCAGGGCCAGGTGTCTCCAGTGCCATCTTCTTTG...CCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137579.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGCCGGCACAAAGAAGATaGCACTGGAGACACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGPRGLCLPGERNRTRCRPAQRR*HWRHLQ Trigger: CTGCAGGTGTCTCCAGTGCCATCTTCTTTGTGCCGG...CCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151401.11 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGTGGATCAAAGGATGTTaGGTCCAGCTGCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLCLPGERNRTRCRLEWIKGC*VQLQQA Trigger: CGCCTGCTGCAGCTGGACCCAACATCCTTTGATCCA...CTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTCAAAGAAGATGGCACTaGAGACACCTGGAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPGASAFQVKGTEPGVGQRRWH*RHLERG Trigger: CCCCCTCTCCAGGTGTCTCCAGTGCCATCTTCTTTG...ACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGGGCTCCGGAGAGGCCTaGGCTCCGTCCTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGWHALNFLSKFKGAWWLGSGEA*APSSSF Trigger: AAATGATGAGGACGGAGCCCAGGCCTCTCCGGAGCC...CAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGTGAGGGTCCCAGGGGCCTGGATCAAAGGATGTTaGGTCCAGCTGCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPEQIQRGLVVVRVPGAWIKGC*VQLQQA Trigger: CGCCTGCTGCAGCTGGACCCAACATCCTTTGATCCA...GGCCCCTGGGACCCTCACAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTCAAAGAAGATGGCACTaGAGACACCTAGCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVPGASAFQVKGTEPGVGQRRWH*RHLAPT Trigger: TGTTGGGGCTAGGTGTCTCCAGTGCCATCTTCTTTG...ACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR TCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATGCCCTGACCTGGTGCTaGCTCCCCCATCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YPFISTKLHQPRSPEPRNALTWC*LPHPAP Trigger: CGGAGCCGGATGGGGGAGTCAGCACCAGGTCAGGGC...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000137579.6 ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| CDS-3UTR TCA 90 bp | AGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACCAGAATCCCTGGCCCTaGCCTGGTGCTGACTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: STKLHQPRSPEPRNKLRHQNPWP*PGADSP Trigger: GGGGGAGTCAGCACCAGGTCAGGGCCAGGGATTCTG...GTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| CDS-3UTR CCA 90 bp | GCACACCTGAGGCCATCCAGGTTGTCCTTGGGAAGTTGGTGGTCCTCTAGAGCTCAAAGAAGATGGCACTaGAGACACCTAGCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AHLRPSRLSLGSWWSSRAQRRWH*RHLAPT Trigger: TGTTGGGGCTAGGTGTCTCCAGTGCCATCTTCTTTG...AGCTCTAGAGGACCACCAACTTCCCAAGGACAACCTGGATGGCCTCAGGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTGCCCTGACCTGGTGCTaGCTCCCCCATCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLAQNYTNPGVQNPGISALTWC*LPHPAP Trigger: CGGAGCCGGATGGGGGAGTCAGCACCAGGTCAGGGC...ACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000137579.6 ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGAGCACTGCACACATATaGTTGTGGAGGGGAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FPGWHALNFLSKFKGAWWSTAHI*LWRGRT Trigger: CGTCCTTCCCCTCCACAATCATATGTGTGCAGTGCT...CCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138593.10 |
||
| CDS-3UTR GCA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCGTGCTGAAGGACCACTaGGAGCTGCGGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: AIFPGWHALNFLSKFKGAVLKDH*ELRTDM Trigger: CATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR TCA 90 bp | AATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGCAGAATCCCTGGCCCTaGCCTGGTGCTGACTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NYPFISTKLHQPRSPEPRQNPWP*PGADSP Trigger: GGGGGAGTCAGCACCAGGTCAGGGCCAGGGATTCTG...CCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
||
| CDS-3UTR GCA 90 bp | AATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGCTGAAGGACCACTaGGAGCTGCGGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: NIPRLACSKLPEQIQRGLVLKDH*ELRTDM Trigger: CATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC...CAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACGGCTCCGGAGAGGCCTaGGCTCCGTCCTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: STKLHQPRSPEPRNKLRHGSGEA*APSSSF Trigger: AAATGATGAGGACGGAGCCCAGGCCTCTCCGGAGCC...GTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAGGAGACACCTGGCCCTaGCCTGGTGCTGACTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FISTKLHQPRSPEPRNKLGDTWP*PGADSP Trigger: GGGGGAGTCAGCACCAGGTCAGGGCCAGGTGTCTCC...TAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137579.6 |
||
| CDS-3UTR GCA 90 bp | ACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACAGGCACTGGAGACACCTaGAGCAGGCGTTGTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKLHQPRSPEPRNKLRHTGTGDT*SRRCRS Trigger: GCTCCTACAACGCCTGCTGCAGGTGTCTCCAGTGCC...TGTGTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151401.11 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTACAGAATCCCTGGTGCTaGCTCCCCCATCCGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FISTKLHQPRSPEPRNKLQNPWC*LPHPAP Trigger: CGGAGCCGGATGGGGGAGTCAGCACCAGGGATTCTG...TAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATGGCTCCGGAGAGGCCTaGGCTCCGTCCTCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YPFISTKLHQPRSPEPRNGSGEA*APSSSF Trigger: AAATGATGAGGACGGAGCCCAGGCCTCTCCGGAGCC...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCACCCGGCGGTTTTTCTaGATCAAAGGATGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AIFPGWHALNFLSKFKGATRRFF*IKGCWV Trigger: GACCCAACATCCTTTGATCCAGAAAAACCGCCGGGT...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACCAAAGAAGATGGCACTaGAGACACCTGGAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STKLHQPRSPEPRNKLRHQRRWH*RHLERG Trigger: CCCCCTCTCCAGGTGTCTCCAGTGCCATCTTCTTTG...GTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGCCGGCACAAAGAAGATaGCACTGGAGACACCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNIPRLACSKLPEQIQRPAQRR*HWRHLA Trigger: GGCTAGGTGTCTCCAGTGCCATCTTCTTTGTGCCGG...CCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR GCA 90 bp | ATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAGTGCTGAAGGACCACTaGGAGCTGCGGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: ITLLLAQNYTNPGVQNPGVLKDH*ELRTDM Trigger: CATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC...TCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | AATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGACCCGGCGGTTTTTCTaGATCAAAGGATGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NIPRLACSKLPEQIQRGLTRRFF*IKGCWV Trigger: GACCCAACATCCTTTGATCCAGAAAAACCGCCGGGT...CAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
||
| CDS-3UTR CCA 90 bp | ACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACACAAAGAAGATGGCACTaGAGACACCTGGAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKLHQPRSPEPRNKLRHTQRRWH*RHLERG Trigger: CCCCCTCTCCAGGTGTCTCCAGTGCCATCTTCTTTG...TGTGTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTGTGCTGAAGGACCACTaGGAGCTGCGGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLAQNYTNPGVQNPGISVLKDH*ELRTDM Trigger: CATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC...ACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CCA 90 bp | AGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACCCGGCGGTTTTTCTaGATCAAAGGATGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: STKLHQPRSPEPRNKLRHTRRFF*IKGCWV Trigger: GACCCAACATCCTTTGATCCAGAAAAACCGCCGGGT...GTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CCA 90 bp | ATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGACAAAGAAGATGGCACTaGAGACACCTGCAGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ITLLLAQNYTNPGVQNPGQRRWH*RHLQQA Trigger: CGCCTGCTGCAGGTGTCTCCAGTGCCATCTTCTTTG...TCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151401.11 |
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| CDS-3UTR CCA 90 bp | AATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGCCGGCACAAAGAAGATaGCACTGGAGACACCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: NYPFISTKLHQPRSPEPRPAQRR*HWRHLA Trigger: GGCTAGGTGTCTCCAGTGCCATCTTCTTTGTGCCGG...CCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR TCA 90 bp | TACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATGTCTCCCACCTAAACTaGTGTTTCCTGGGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: YPFISTKLHQPRSPEPRNVSHLN*CFLGRT Trigger: TGTTCTGCCCAGGAAACATCAGTTTAGGTGGGAGAC...ATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138593.10 |
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| CDS-3UTR CCA 90 bp | ATAATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCATGGATCAAAGGATGTTaGGTCCAGCTGCAGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: IITLLLAQNYTNPGVQNPWIKGC*VQLQQA Trigger: CGCCTGCTGCAGCTGGACCCAACATCCTTTGATCCA...TGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CCA 90 bp | TTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTATGGATCAAAGGATGTTaGGTCCAGCTGCAGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: FISTKLHQPRSPEPRNKLWIKGC*VQLQQA Trigger: CGCCTGCTGCAGCTGGACCCAACATCCTTTGATCCA...TAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CCA 90 bp | CTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTACCCGGCGGTTTTTCTaGATCAAAGGATGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LLLAQNYTNPGVQNPGISTRRFF*IKGCWV Trigger: GACCCAACATCCTTTGATCCAGAAAAACCGCCGGGT...ACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CCA 90 bp | ATAATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAACCCGGCGGTTTTTCTaGATCAAAGGATGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IITLLLAQNYTNPGVQNPTRRFF*IKGCWV Trigger: GACCCAACATCCTTTGATCCAGAAAAACCGCCGGGT...TGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS CCA 90 bp | GAGCCCGGCGTTCGAAGTGCAGCGGCCCGAAGCGGGCGACCCCGCTaGACTCGGGCTCAGGCCCCGCGTCCTCCAGGGTCAGCTCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: EPGVRSAAARSGRPR*TRAQAPRPPGSARR Trigger: CCTTCGAGCTGACCCTGGAGGACGCGGGGCCTGAGCCCGAGTCCAGCGGGGTCGCCCGCTTCGGGCCGCTGCACTTCGAACGCCGGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000135257.11 ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000153654.11 ENSMUST00000169055.10 |
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| CDS GCA 90 bp | TGCTTGTCTTCATCAGCCACCTCGAACCGAGCCCGGCGTTCGAAGTaGAGCGGCCCGAAGCGGGCGACCCCGCTGGACTCGGGCTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: CLSSSATSNRARRSK*SGPKRATPLDSGSG Trigger: GCCTGAGCCCGAGTCCAGCGGGGTCGCCCGCTTCGGGCCGCTGCACTTCGAACGCCGGGCTCGGTTCGAGGTGGCTGATGAAGACAAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000135257.11 ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000153654.11 ENSMUST00000169055.10 |
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| CDS TCA 90 bp | ACCACTGCGAGCTGCGGACAGACATGTGCCCAGAATCCCTGGCCCTaGCCTGGTGCTGACTCCCCCATCCGGCTCCGGAGAGGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: TTASCGQTCAQNPWP*PGADSPIRLRRGLG Trigger: GCCCAGGCCTCTCCGGAGCCGGATGGGGGAGTCAGCACCAGGTCAGGGCCAGGGATTCTGGGCACATGTCTGTCCGCAGCTCGCAGTGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140405.10 ENSMUST00000148807.11 |
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| CDS TCA 90 bp | ACCACTGCGAGCTGCGGACAGACATGTGCCCAGAATCCCTGGTGCTaGCTCCCCCATCCGGCTCCGGAGAGGCCTGGGCTCCGTCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TTASCGQTCAQNPWC*LPHPAPERPGLRPH Trigger: ATGAGGACGGAGCCCAGGCCTCTCCGGAGCCGGATGGGGGAGTCAGCACCAGGGATTCTGGGCACATGTCTGTCCGCAGCTCGCAGTGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GAGGGTCCCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPRGLCLPGERNRTRCRGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...CCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGGGACCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | CCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGCCAGGGCAGGGTACTTaGGCAGGCCCTAGCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGASAFQVKGTEPGVGWRPGQGT*AGPSPN Trigger: GTTGGGGCTAGGGCCTGCCAAAGTACCCTGCCCTGG...CCTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138593.10 |
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| CDS-3UTR CAA 90 bp | CTAGTGCTACAGAGCCAGGCAGGAACCAGGGTACCAGCCTCTAGGCCTGGTGCCCTGGATCAAAGGATGTaGGGTCCAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLQSQAGTRVPASRPGALDQRM*GPAAAG Trigger: GCCTGCTGCAGCTGGACCCAACATCCTTTGATCCAG...GGCACCAGGCCTAGAGGCTGGTACCCTGGTTCCTGCCTGGCTCTGTAGCACTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | CCAGGGGCCTCTGCCTTCCAGGTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGCGTAGCCGGGACTGCTaGTCTTCATCAGCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGASAFQVKGTEPGVGWRRSRDC*SSSATS Trigger: CGAGGTGGCTGATGAAGACAAGCAGTCCCGGCTACG...CCTCCAACCTACACCTGGTTCTGTTCCTTTCACCTGGAAGGCAGAGGCCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GCACACCTGAGGCCATCCAGGTTGTCCTTGGGAAGTTGGTGGTCCTCTAGAGCTCTGGATCAAAGGATGTaGGGTCCAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHLRPSRLSLGSWWSSRALDQRM*GPAAAG Trigger: GCCTGCTGCAGCTGGACCCAACATCCTTTGATCCAG...AGCTCTAGAGGACCACCAACTTCCCAAGGACAACCTGGATGGCCTCAGGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139987.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGTTGCGTAGCCGGGACTGCTaGTCTTCATCAGCCACCTCG | + |
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Preference number: 5 (lower is better) Translates to: PGWHALNFLSKFKGAWWLRSRDC*SSSATS Trigger: CGAGGTGGCTGATGAAGACAAGCAGTCCCGGCTACG...CAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | ATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: IPRLACSKLPEQIQRGLVGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...CACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGAATACCCTGTGGACACGTGGACGTAGCCGGGACTGCTaGTCTTCATCAGCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VKGTEPGVGWRNTLWTRGRSRDC*SSSATS Trigger: CGAGGTGGCTGATGAAGACAAGCAGTCCCGGCTACG...TCCACGTGTCCACAGGGTATTCCTCCAACCTACACCTGGTTCTGTTCCTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AIFPGWHALNFLSKFKGAGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | TTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCTGGTGGCTGGATCAAAGGATGTaGGGTCCAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPGWHALNFLSKFKGAWWLDQRM*GPAAAG Trigger: GCCTGCTGCAGCTGGACCCAACATCCTTTGATCCAG...CCACCAGGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTCAAAGGGGCCCGTAGCCGGGACTGCTaGTCTTCATCAGCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AIFPGWHALNFLSKFKGARSRDC*SSSATS Trigger: CGAGGTGGCTGATGAAGACAAGCAGTCCCGGCTACG...GGCCCCTTTGAATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | GTGAAAGGAACAGAACCAGGTGTAGGTTGGAGGAATACCCTGTGGACACGTGGACTGGATCAAAGGATGTaGGGTCCAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKGTEPGVGWRNTLWTRGLDQRM*GPAAAG Trigger: GCCTGCTGCAGCTGGACCCAACATCCTTTGATCCAG...TCCACGTGTCCACAGGGTATTCCTCCAACCTACACCTGGTTCTGTTCCTTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | CAGGTAAGAGGCAATATTCCCAGGCTGGCATGCTCTAAACTTCCTGAGCAAATTGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVRGNIPRLACSKLPEQIGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...AATTTGCTCAGGAAGTTTAGAGCATGCCAGCCTGGGAATATTGCCTCTTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | ACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTAAGGCACACAGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKLHQPRSPEPRNKLRHTGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...TGTGTGCCTTAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | AATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NYPFISTKLHQPRSPEPRGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...CCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | CTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTGGGCAGGTAGAAGAATaGGAAGCCCCGGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLAQNYTNPGVQNPGISGQVEE*EAPAAL Trigger: AAGGGCCGCCGGGGCTTCCAATTCTTCTACCTGCCC...ACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | TTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCAGGAATAAGTTACGTAGCCGGGACTGCTaGTCTTCATCAGCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FISTKLHQPRSPEPRNKLRSRDC*SSSATS Trigger: CGAGGTGGCTGATGAAGACAAGCAGTCCCGGCTACG...TAACTTATTCCTGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS-3UTR CAA 90 bp | ATAATTACCCTTTTATTAGCACAAAATTACACCAACCCAGGAGTCCAGAACCCACTGGATCAAAGGATGTaGGGTCCAGCTGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IITLLLAQNYTNPGVQNPLDQRM*GPAAAG Trigger: GCCTGCTGCAGCTGGACCCAACATCCTTTGATCCAG...TGGGTTCTGGACTCCTGGGTTGGTGTAATTTTGTGCTAATAAAAGGGTAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000169055.10 |
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| CDS CCA 72 bp | GTTCGAAGTGCAGCGGCCCGAAGCGGGCGACCCCGCTaGACTCGGGCTCAGGCCCCGCGTCCTCCAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VRSAAARSGRPR*TRAQAPRPPGS Trigger: TGACCCTGGAGGACGCGGGGCCTGAGCCCGAGTCCAGCGGGGTCGCCCGCTTCGGGCCGCTGCACTTCGAAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000135257.11 ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000153654.11 ENSMUST00000169055.10 |
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| CDS GCA 72 bp | TCATCAGCCACCTCGAACCGAGCCCGGCGTTCGAAGTaGAGCGGCCCGAAGCGGGCGACCCCGCTGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSATSNRARRSK*SGPKRATPLDS Trigger: CGAGTCCAGCGGGGTCGCCCGCTTCGGGCCGCTGCACTTCGAACGCCGGGCTCGGTTCGAGGTGGCTGATGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000135257.11 ENSMUST00000137579.6 ENSMUST00000138593.10 ENSMUST00000139987.10 ENSMUST00000140267.10 ENSMUST00000140405.10 ENSMUST00000148807.11 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000153654.11 ENSMUST00000169055.10 |
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| CDS TCA 72 bp | AGCTGCGGACAGACATGTGCCCAGAATCCCTGGTGCTaGCTCCCCCATCCGGCTCCGGAGAGGCCTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCGQTCAQNPWC*LPHPAPERPGL Trigger: GAGCCCAGGCCTCTCCGGAGCCGGATGGGGGAGTCAGCACCAGGGATTCTGGGCACATGTCTGTCCGCAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS GCA 72 bp | GTGCTGAAGGACCACTGCGAGCTGCGGACAGACATGTaGCCAGAATCCCTGGTGCTGACTCCCCCATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLKDHCELRTDM*PESLVLTPPSG Trigger: GCCGGATGGGGGAGTCAGCACCAGGGATTCTGGGCACATGTCTGTCCGCAGCTCGCAGTGGTCCTTCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000138593.10 ENSMUST00000140267.10 ENSMUST00000150627.11 ENSMUST00000151401.11 ENSMUST00000169055.10 |
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| CDS TCA 72 bp | AGCCAGGCTTTGGCCCGATGCGTCTCCCACCTAAACTaGTGTTTCCTGGGCAGAACACCTCCCAGGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQALARCVSHLN*CFLGRTPPRMR Trigger: GCGCATCCTGGGAGGTGTTCTGCCCAGGAAACATCAGTTTAGGTGGGAGACGCATCGGGCCAAAGCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138593.10 |
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