RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034310

Ensembl transcript IDs: ENSMUST00000044441.8

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGGCCCTCCCCAGCTAACAGGGGATCATTTCCCAGGGTTCTGTaGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: LWPSPANRGSFPRVL*TVLPLWCPLVSFLP
Trigger: GGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAATGATCCCCTGTTAGCTGGGGAGGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 90 bp CCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATaGTGTCCAAGCATGCGCAAGCCCACGTTCCTGACACTCGTCTCT +
Preference number: 1 (lower is better)
Translates to: PLYTCIHLPIPAHLS*CPSMRKPTFLTLVS
Trigger: AGAGACGAGTGTCAGGAACGTGGGCTTGCGCATGCTTGGACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp TGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTaGGTACGTGCCTACTCCCCATACCCAAGTGGGTTAAAGGCTGAA +
Preference number: 1 (lower is better)
Translates to: WTVLPLWCPLVSFLP*VRAYSPYPSGLKAE
Trigger: TTCAGCCTTTAACCCACTTGGGTATGGGGAGTAGGCACGTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 90 bp CATCCTCACTTCATAGTGAGACCAGGATTGGGGTGGGGGATCTCCTaGCCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTTGAGG +
Preference number: 1 (lower is better)
Translates to: HPHFIVRPGLGWGIS*PCLPYHLHRLSILR
Trigger: CCTCAAGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATCCTGGTCTCACTATGAAGTGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp TACCTACCCAAACAAAGAAGAGTCTACTGGGAGCTGGGAGCTGGGTaGCTTGCTGGCTGTCAGAACAAAAGGATTAGCACCACAGTCAGA +
Preference number: 1 (lower is better)
Translates to: YLPKQRRVYWELGAG*LAGCQNKRISTTVR
Trigger: TCTGACTGTGGTGCTAATCCTTTTGTTCTGACAGCCAGCAAGCCACCCAGCTCCCAGCTCCCAGTAGACTCTTCTTTGTTTGGGTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp GCCATGCATACTAAACCTCCTAAGTTGAACCAAAGCATCATTCACTaGCAAGTGCATGGATACCATGACTCTGGCCCTCCCCAGCTAACA +
Preference number: 1 (lower is better)
Translates to: AMHTKPPKLNQSIIH*QVHGYHDSGPPQLT
Trigger: TGTTAGCTGGGGAGGGCCAGAGTCATGGTATCCATGCACTTGCCAGTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAGTATGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp TGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTaGGACCTCCTCTATAGAATGTCACCTGAAGTTGACAGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: CLHSGDQSLHRDMCP*DLLYRMSPEVDRKL
Trigger: GAGCTTCCTGTCAACTTCAGGTGACATTCTATAGAGGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 90 bp CTCTATAGAATGTCACCTGAAGTTGACAGGAAGCTCAGGGGAACTTaGGGCAGGGAGCAAATTCTGGGAAACACTCTTCTTTCCTCACTT +
Preference number: 1 (lower is better)
Translates to: LYRMSPEVDRKLRGT*GREQILGNTLLSSL
Trigger: AAGTGAGGAAAGAAGAGTGTTTCCCAGAATTTGCTCCCTGCCTCAAGTTCCCCTGAGCTTCCTGTCAACTTCAGGTGACATTCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 90 bp ATCTACAATACATTCTACACGTGGAGGGATTTGCGAACAGGCATCTaGTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAG +
Preference number: 1 (lower is better)
Translates to: IYNTFYTWRDLRTGI*CSSQGNVTWVRRGK
Trigger: CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGTTCGCAAATCCCTCCACGTGTAGAATGTATTGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 90 bp TACAATACATTCTACACGTGGAGGGATTTGCGAACAGGCATCTGCTaGAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGAAA +
Preference number: 1 (lower is better)
Translates to: YNTFYTWRDLRTGIC*SSQGNVTWVRRGKK
Trigger: TTTCTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGTTCGCAAATCCCTCCACGTGTAGAATGTATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp GATTTGCGAACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATaGGTAAGAAGGGGAAAGAAATCAGAAAGTGGACAATGGAAAGCA +
Preference number: 1 (lower is better)
Translates to: DLRTGICCSSQGNVT*VRRGKKSESGQWKA
Trigger: TGCTTTCCATTGTCCACTTTCTGATTTCTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGTTCGCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 90 bp TCCAGGTTTGACAACATCTTGCCATGCATACTAAACCTCCTAAGTTaGACCAAAGCATCATTCACTGGCAAGTGCATGGATACCATGACT +
Preference number: 1 (lower is better)
Translates to: SRFDNILPCILNLLS*TKASFTGKCMDTMT
Trigger: AGTCATGGTATCCATGCACTTGCCAGTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAGTATGCATGGCAAGATGTTGTCAAACCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 90 bp AGAAGGGGAAAGAAATCAGAAAGTGGACAATGGAAAGCAAAGGTTTaGAGTGGTGAAGTTACCTACCCAAACAAAGAAGAGTCTACTGGG +
Preference number: 1 (lower is better)
Translates to: RRGKKSESGQWKAKV*SGEVTYPNKEESTG
Trigger: CCCAGTAGACTCTTCTTTGTTTGGGTAGGTAACTTCACCACTGCAAACCTTTGCTTTCCATTGTCCACTTTCTGATTTCTTTCCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 90 bp AATGTCACATGGGTAAGAAGGGGAAAGAAATCAGAAAGTGGACAATaGAAAGCAAAGGTTTGCAGTGGTGAAGTTACCTACCCAAACAAA +
Preference number: 1 (lower is better)
Translates to: NVTWVRRGKKSESGQ*KAKVCSGEVTYPNK
Trigger: TTTGTTTGGGTAGGTAACTTCACCACTGCAAACCTTTGCTTTCCATTGTCCACTTTCTGATTTCTTTCCCCTTCTTACCCATGTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR TCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTACAGGAGACCCAACATaGGGGGTGGCAGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: GGGSPDHASLTISIDSASTGDPT*GVAEPI
Trigger: GATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGT...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR GCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTGGGTTCTGTGGACAGTaGTGCCCTTGTGGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GGGSPDHASLTISIDSASGFCGQ*CPCGVL
Trigger: GAGGACACCACAAGGGCAGCACTGTCCACAGAACCC...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR GCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCACACAGCCTCCACAGATaGACAGCTACCCACTATGTG +
Preference number: 2 (lower is better)
Translates to: DWGGGSPDHASLTISIDSHSLHR*TATHYV
Trigger: CACATAGTGGGTAGCTGTGCATCTGTGGAGGCTGTG...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CCA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTTTCCCAGGGTTCTGTaGACAGTGCTGCCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCFPRVL*TVLPLW
Trigger: CCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAA...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 90 bp GGGATATGTGTCCCTGGGACCTCCTCTATAGAATGTCACCTGAAGTaGACAGGAAGCTCAGGGGAACTTGAGGCAGGGAGCAAATTCTGG +
Preference number: 2 (lower is better)
Translates to: GICVPGTSSIECHLK*TGSSGELEAGSKFW
Trigger: CCAGAATTTGCTCCCTGCCTCAAGTTCCCCTGAGCTTCCTGTCAACTTCAGGTGACATTCTATAGAGGAGGTCCCAGGGACACATATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR GCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTCCACTCAGATGCCATaGCTCTTGCCTCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCSTQMP*LLPLTH
Trigger: GTGGGTCAGAGGCAAGAGGCATGGCATCTGAGTGGA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTAAAGCAAGGGCGGGGTaGGGAATTCACTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCKARAG*GIHSES
Trigger: GGACTCAGAGTGAATTCCCCACCCCGCCCTTGCTTT...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR TCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTAAGCTCAGGGGAACTTaGGGCAGGGAGCAAATTCTG +
Preference number: 2 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCKLRGT*GREQIL
Trigger: CAGAATTTGCTCCCTGCCTCAAGTTCCCCTGAGCTT...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR GCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTTCTGTGGACAGTGCTaGCCTTGTGGTGTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCFCGQC*PCGVLL
Trigger: CAAGAGGACACCACAAGGGCAGCACTGTCCACAGAA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCACAGTGCTGCCCTTGTaGTGTCCTCTTGTCTCATTT +
Preference number: 2 (lower is better)
Translates to: VYILETSLFTGICVPGTSTVLPL*CPLVSF
Trigger: AAATGAGACAAGAGGACACCACAAGGGCAGCACTGT...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR TCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCACAAGTTCAAATCTTGTaGACTTGCATTAAGGAGCGT +
Preference number: 2 (lower is better)
Translates to: DWGGGSPDHASLTISIDSQVQIL*TCIKER
Trigger: ACGCTCCTTAATGCAAGTTCACAAGATTTGAACTTG...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCGCAGGGAGCAAATTCTaGGAAACACTCTTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: VYILETSLFTGICVPGTSAGSKF*ETLFFP
Trigger: AGGAAAGAAGAGTGTTTCCCAGAATTTGCTCCCTGC...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR TCA 90 bp GACAGGAGACCCAACATGAGGGGTGGCAGAGCCCATCACAAAACAGGTTCTCTACTAAACCTCCTAAGTTaGACCAAAGCATCATTCACT +
Preference number: 2 (lower is better)
Translates to: DRRPNMRGGRAHHKTGSLLNLLS*TKASFT
Trigger: AGTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAG...TAGAGAACCTGTTTTGTGATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR TCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTGTGGGGAATTCACTCTaGGTCCTGTTTACATTCTGG +
Preference number: 2 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCVGNSL*VLFTFW
Trigger: CCAGAATGTAAACAGGACTCAGAGTGAATTCCCCAC...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CCA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTACAAAGCATCATTCACTaGCAAGTGCATGGATACCAT +
Preference number: 2 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVQSIIH*QVHGYH
Trigger: ATGGTATCCATGCACTTGCCAGTGAATGATGCTTTG...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CAA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTCTTGGACCCCCATCTTaGGGAACCAGCTCAATACCC +
Preference number: 3 (lower is better)
Translates to: GGGSPDHASLTISIDSASLGPPS*GTSSIP
Trigger: GGGTATTGAGCTGGTTCCCAAAGATGGGGGTCCAAG...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 72 bp CTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTaGGTACGTGCCTACTCCCCATACCCAAGTGGGTTA +
Preference number: 3 (lower is better)
Translates to: LPLWCPLVSFLP*VRAYSPYPSGL
Trigger: TAACCCACTTGGGTATGGGGAGTAGGCACGTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 72 bp ACAGGGGATCATTTCCCAGGGTTCTGTGGACAGTGCTaGCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCT +
Preference number: 3 (lower is better)
Translates to: TGDHFPGFCGQC*PCGVLLSHFSP
Trigger: AGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAATGATCCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 72 bp CCAGCTCAATACCCTGCCTCCCATAGCCAGCTTCAGTaGTACACTCTGCCTGTGAGCATACTTCGAGTTAGC +
Preference number: 3 (lower is better)
Translates to: PAQYPASHSQLQ*YTLPVSILRVS
Trigger: GCTAACTCGAAGTATGCTCACAGGCAGAGTGTAGCACTGAAGCTGGCTATGGGAGGCAGGGTATTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 72 bp TCATTTCCCAGGGTTCTGTGGACAGTGCTGCCCTTGTaGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACGT +
Preference number: 3 (lower is better)
Translates to: SFPRVLWTVLPL*CPLVSFLPWVR
Trigger: ACGTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CAA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACAGATGCCATGCCTCTaGCCTCTGACCCACACATGC +
Preference number: 3 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIQMPCL*PLTHTC
Trigger: GCATGTGTGGGTCAGAGGCAAGAGGCATGGCATCTG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 72 bp CCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTaGCCCACACATGCTCAACCTGAGCCTTGGATTTTT +
Preference number: 3 (lower is better)
Translates to: PADPLRCHASCL*PTHAQPEPWIF
Trigger: AAAAATCCAAGGCTCAGGTTGAGCATGTGTGGGTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 72 bp CTAACAGGGGATCATTTCCCAGGGTTCTGTGGACAGTaGTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCC +
Preference number: 3 (lower is better)
Translates to: LTGDHFPGFCGQ*CPCGVLLSHFS
Trigger: GGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAATGATCCCCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CAA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAAGGTTTGACAACATCTaGCCATGCATACTAAACCTC +
Preference number: 3 (lower is better)
Translates to: DWGGGSPDHASLTISIDSRFDNI*PCILNL
Trigger: GAGGTTTAGTATGCATGGCAAGATGTTGTCAAACCT...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 72 bp TTCTACACGTGGAGGGATTTGCGAACAGGCATCTGCTaGAGTAGTCAAGGAAATGTCACATGGGTAAGAAGG +
Preference number: 3 (lower is better)
Translates to: FYTWRDLRTGIC*SSQGNVTWVRR
Trigger: CCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGTTCGCAAATCCCTCCACGTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CCA 72 bp ACTAAACCTCCTAAGTTGAACCAAAGCATCATTCACTaGCAAGTGCATGGATACCATGACTCTGGCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TKPPKLNQSIIH*QVHGYHDSGPP
Trigger: GGGAGGGCCAGAGTCATGGTATCCATGCACTTGCCAGTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 72 bp GACAACATCTTGCCATGCATACTAAACCTCCTAAGTTaGACCAAAGCATCATTCACTGGCAAGTGCATGGAT +
Preference number: 3 (lower is better)
Translates to: DNILPCILNLLS*TKASFTGKCMD
Trigger: ATCCATGCACTTGCCAGTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAGTATGCATGGCAAGATGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 72 bp AGAAAGTGGACAATGGAAAGCAAAGGTTTGCAGTGGTaGAGTTACCTACCCAAACAAAGAAGAGTCTACTGG +
Preference number: 3 (lower is better)
Translates to: RKWTMESKGLQW*SYLPKQRRVYW
Trigger: CCAGTAGACTCTTCTTTGTTTGGGTAGGTAACTTCACCACTGCAAACCTTTGCTTTCCATTGTCCACTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR TCA 72 bp GTATCAGTAGAGTGTAGTGATCAAGTTCAAATCTTGTaGACTTGCATTAAGGAGCGTGGGGTTTGTATCCAG +
Preference number: 3 (lower is better)
Translates to: VSVECSDQVQIL*TCIKERGVCIQ
Trigger: CTGGATACAAACCCCACGCTCCTTAATGCAAGTTCACAAGATTTGAACTTGATCACTACACTCTACTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR-3UTR CAA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTAACTAAACCTCCTAAGTaGAACCAAAGCATCATTCAC +
Preference number: 3 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVTKPPK*NQSIIH
Trigger: GTGAATGATGCTTTGGTTCAACTTAGGAGGTTTAGT...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR GCA 72 bp AAGAAATCAGAAAGTGGACAATGGAAAGCAAAGGTTTaGAGTGGTGAAGTTACCTACCCAAACAAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: KKSESGQWKAKV*SGEVTYPNKEE
Trigger: CTCTTCTTTGTTTGGGTAGGTAACTTCACCACTGCAAACCTTTGCTTTCCATTGTCCACTTTCTGATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTGGATTCCCCTCTGGCTaGTCCGTGGGCCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASGFPSG*SVGLLR
Trigger: GCGCAGGAGGCCCACGGAGCAGCCAGAGGGGAATCC...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCACCTCTGGCTGCTCCGTaGGCCTCCTGCGCCCAGATA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSPLAAP*ASCAQI
Trigger: TATCTGGGCGCAGGAGGCCCACGGAGCAGCCAGAGG...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTGGTCTGGGAAGCTGGTaGGGTCTGTGGCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASGLGSW*GLWPWS
Trigger: AGACCATGGCCACAGACCTCACCAGCTTCCCAGACC...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTTCCGTGATGTCCACCTaGCAGTCAGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASSVMST*QSEPSR
Trigger: CCTGCTGGGCTCTGACTGGCAGGTGGACATCACGGA...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGGACCCCGAGGTCTGTaGTGGTCACCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSGPRGL*WSPSHP
Trigger: TGGATGAGAAGGTGACCATCACAGACCTCGGGGTCC...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCACCTTCAAAGGTGGACTaGTGGGGGTCTCCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSPSKVD*WGSPEG
Trigger: TCCTTCGGGAGACCCCCAGCAGTCCACCTTTGAAGG...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACGAGCTGGCCTTTTGTTaGAGACAATGGGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYELAFC*RQWGPA
Trigger: GGCGGGTCCCCATTGTCTCCAACAAAAGGCCAGCTC...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GACAGGAGACCCAACATGAGGGGTGGCAGAGCCCATCACAAAACAGGTTCTCTACCGGGGAGGTCCATTTaGTCTGGGAAGCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DRRPNMRGGRAHHKTGSLPGRSI*SGKLVR
Trigger: CCTCACCAGCTTCCCAGACCAAATGGACCTCCCCGG...TAGAGAACCTGTTTTGTGATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTCAGTTATCAGCTCCGTaGTGTCCACCTGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASQLSAP*CPPASQ
Trigger: CTGACTGGCAGGTGGACATCACGGAGCTGATAACTG...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTGGGCTCCCCCATTCCTaGAAAGGCTTTTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASGLPHS*KGFLDL
Trigger: GAGGTCCAAAAAGCCTTTTCAGGAATGGGGGAGCCC...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACAGCCCCTTGGCTGCCTaGTCAAGGTCATGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYSPLAA*SRSCSS
Trigger: TGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCT...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTAGGATCTGCCCTCCTTaGAGCTTAGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASRICPP*SLAILG
Trigger: GCCCAGGATTGCTAAGCTGCAAGGAGGGCAGATCCT...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCTGGCAGTGGCAAAGATaGCTCTGTTGCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSWQWQR*LCCSRG
Trigger: GCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCA...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCACCAGCAGATTTCTTCTaGCAAACGATGACGGCCGGA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSPADFF*QTMTAG
Trigger: TCCGGCCGTCATCGTTTGTCAGAAGAAATCTGCTGG...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCATTCAACCTGCCACGTaGCCAGCTGTGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSIQPAT*PAVWWV
Trigger: CACCCACCACACAGCTGGTCACGTGGCAGGTTGAAT...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAATGTGGAAGAGCACCTaGACTTTGGGATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSMWKST*TLGWLR
Trigger: CCTGAGCCATCCCAAAGTGCAGGTGCTCTTCCACAT...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TACTTCGAGTTAGCCCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTGACTGGCCAGTCAGGATCTaGCCTCCTTGCAGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YFELALLIHSDAMPLASDWPVRI*PPCSLA
Trigger: TGCTAAGCTGCAAGGAGGGCAGATCCTGACTGGCCA...GTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGGGCTAACTCGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TACTTCGAGTTAGCCCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTGACGGCCTTCCGTCACTTTaGAGAAAAGGGCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: YFELALLIHSDAMPLASDGLPSL*RKGQLG
Trigger: GCCTAGCTGCCCTTTTCTCCAAAGTGACGGAAGGCC...GTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGGGCTAACTCGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCATCAAGACTCGCACCATaGCATGCTGGTACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSSRLAP*HAGTEG
Trigger: CCCTTCAGTACCAGCATGCCATGGTGCGAGTCTTGA...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCAGCCCTGTTACCAGCTaGACCCCGAGGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSSPVTS*TPRSVM
Trigger: CATCACAGACCTCGGGGTCCAGCTGGTAACAGGGCT...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGAAGTTCCTGAGCCATaGCAGTGGCAAAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSEVPEP*QWQRWL
Trigger: GAGCCATCTTTGCCACTGCCATGGCTCAGGAACTTC...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 72 bp GGATCATTTCCCAGGGTTCTGTGGACAGTGCTGCCCTaGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSFPRVLWTVLP*WCPLVSFLPWV
Trigger: TACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACAGAACCCTGGGAAATGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACCCTGTCAATGGCAGTaGTCTGCTCCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIPCQWQ*SAPLGR
Trigger: CCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCCCTGGGTATTCAACCTaGCACGTGACCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCPGYST*HVTSCV
Trigger: CACACAGCTGGTCACGTGGCAGGTTGAATACCCAGG...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGGTGTCCACTCTCACTaGTGTTGGGGTTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSGVHSH*CWGLHH
Trigger: ATGATGCAAACCCCAACAGCAGTGAGAGTGGACACC...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TACTTCGAGTTAGCCCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTGACTGGGGTCCTGGAGGATaGAGACAACCTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: YFELALLIHSDAMPLASDWGPGG*RQPSHP
Trigger: TGGATGAGAAGGTTGTCTCCATCCTCCAGGACCCCA...GTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGGGCTAACTCGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTGAGGCGAAGTTCATATaGTTCCCCAACAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASEAKFI*FPNSSV
Trigger: GACAGAGCTGTTGGGGAACCATATGAACTTCGCCTC...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGTGATCTGCTCCTCTTaGGAGGAGGCGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSVICSS*EEAKFI
Trigger: TATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCAC...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GACAGGAGACCCAACATGAGGGGTGGCAGAGCCCATCACAAAACAGGTTCTCTAACTCAGTGCTCTGTCTaGCATCCCAGATTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DRRPNMRGGRAHHKTGSLTQCSV*HPRLKS
Trigger: GCTCTTCAATCTGGGATGTCAGACAGAGCACTGAGT...TAGAGAACCTGTTTTGTGATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCCTCCCAGGTCAGAGGTaGTCTCTCCTGGGTATTCAA +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSLPGQR*SLLGIQ
Trigger: TTGAATACCCAGGAGAGATCACCTCTGACCTGGGAG...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCATCTGAGAGTTTGAGCTaGGAAGGAGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSSESLS*EGVCSP
Trigger: AGGAGAGCAAACTCCTTCTCAGCTCAAACTCTCAGA...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGGTGAGAACCGCTGAATaGTCTCCAGGATCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKVRTAE*SPGSLG
Trigger: GCCGAGGGATCCTGGAGAGCATTCAGCGGTTCTCAC...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCACAGCTCTGTCCGGTTaGTCAGCCCAACCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPTALSG*SAQPSR
Trigger: ACGACTGGGTTGGGCTGAGCAACCGGACAGAGCTGT...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCCAGTTCCTTCAAAGGTaGACTGCTGGGGGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPQFLQR*TAGGLP
Trigger: CGGGAGACCCCCAGCAGTCCACCTTTGAAGGAACTG...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCGCCTCAGCCACAAATTaGGTCAAGACTCGCACCATG +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSASATN*VKTRTM
Trigger: CATGGTGCGAGTCTTGACCCAATTTGTGGCTGAGGC...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACCTGAGCCATGGCAGTaGCAAAGATGGCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIPEPWQ*QRWLCC
Trigger: GCAACAGAGCCATCTTTGCCACTGCCATGGCTCAGG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACCAGGATCCAGGCCCTaGCAGACCCACTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIPGSRP*QTHLMS
Trigger: TGACATTAAGTGGGTCTGCCAGGGCCTGGATCCTGG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCCCACCGTCTTTCCAGTaGGGATGGCTGTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPPPSFQ*GWLCSG
Trigger: TCCTGAACACAGCCATCCTCACTGGAAAGACGGTGG...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAAAAGACCTTGTACTGTaGCATCTTCCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: DWGGGSPDHASLTISIDSKDLVL*HLPPQR
Trigger: TCTCTGTGGAGGAAGATGGCACAGTACAAGGTCTTT...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACCTACCACGTTCACCTTaGCCTTCATTTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYLPRSP*PSFLSH
Trigger: ATGGGAAAGAAATGAAGGGCAAGGTGAACGTGGTAG...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCCTGGGCTCCTCTACCTaGATGAAGTCAGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCLGSST*MKSVIS
Trigger: GCTGATAACTGACTTCATGCAGGTAGAGGAGCCCAG...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTCAATGGCAGTGATCTaGTCCTCTTGGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPSMAVI*SSWEEA
Trigger: CGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGA...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCAGATTGAAGAGCTGCTaGCTCTCACCCCAACAATGC +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSRLKSC*LSPQQC
Trigger: GCATTGTTGGGGTGAGAGCCAGCAGCTCTTCAATCT...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCTGGCCTTCCTTCTTCTaGAAAGTTGGCCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSWPSFF*KVGLLV
Trigger: CACCAAGAGGCCAACTTTCCAGAAGAAGGAAGGCCA...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATAGAGGTCCATTTGGTCTaGGAAGCTGGTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIEVHLV*EAGEVC
Trigger: ACAGACCTCACCAGCTTCCCAGACCAAATGGACCTC...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCGGTCACTCAGCCCCTTaGCTGCCTGATCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPGHSAP*LPDQGH
Trigger: ATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACC...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGTCTGACATCCCAGATTaGAGAGCTGCTGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKSDIPD*RAAGSH
Trigger: GTGAGAGCCAGCAGCTCTTCAATCTGGGATGTCAGA...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATAGTTCAACTCCATGTCTaGGACCTCAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIVQLHV*DLNLQR
Trigger: CCTCTGCAGATTGAGGTCTCAGACATGGAGTTGAAC...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGCCCAGATTGAAGAGCTaGTGGCTCTCACCCCAACAA +
Preference number: 4 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKPRLKS*WLSPQQ
Trigger: TTGTTGGGGTGAGAGCCAGCAGCTCTTCAATCTGGG...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp GACAGGAGACCCAACATGAGGGGTGGCAGAGCCCATCACAAAACAGGTTCTCTACTGTCCTTCGTTTTCTaGAGCAATGATAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: DRRPNMRGGRAHHKTGSLLSFVF*SNDRPL
Trigger: AAGTGGCCTATCATTGCTGCAGAAAACGAAGGACAG...TAGAGAACCTGTTTTGTGATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGACTCAGCCCCTTGGCTaGCTGATCAAGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKTQPLG*LIKVMF
Trigger: GAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGT...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGTTGCGCATGATGTCCTaGTTGGCCTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKLRMMS*LASFRK
Trigger: CTTCCTGAAGGAGGCCAACCAGGACATCATGCGCAA...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTGGCTGCTTCCTGTTTaGGCCTCTGCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCWLLPV*ASAEVP
Trigger: AGGAACTTCTGCAGAGGCCCAAACAGGAAGCAGCCA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCTTGAATTTGGGGTCCTaGAGGATGGAGACAACCTTC +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSLNLGS*RMETTF
Trigger: GAAGGTTGTCTCCATCCTCCAGGACCCCAAATTCAA...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTTCTAACAGGTTTTCCTaGCCTTCCTTCTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GGGSPDHASLTISIDSASSNRFS*PSFFWK
Trigger: TTTCCAGAAGAAGGAAGGCCAGGAAAACCTGTTAGA...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTCTTCTGACAAACGATaGCGGCCGGAGCATATTTCC +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPSSDKR*RPEHIS
Trigger: GGAAATATGCTCCGGCCGTCATCGTTTGTCAGAAGA...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTCTGTGGCCATGGTCTaGGAGAGGATGATGTCATCT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCSVAMV*ERMMSS
Trigger: AGATGACATCATCCTCTCTCAGACCATGGCCACAGA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACCATTGATGCTGTTCTaGGAGTTTGAGCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIPLMLF*EFELRR
Trigger: CCTTCTCAGCTCAAACTCTCAGAACAGCATCAATGG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACACTGCTGTTGGGGTTTaGATCATTCTGTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYTAVGV*IILSKF
Trigger: AAATTTGGACAGAATGATGCAAACCCCAACAGCAGT...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACGTTAGTGAATCCAAATaGGTTGGAAGGCAACATCAA +
Preference number: 4 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYVSESK*VGRQHQ
Trigger: TTGATGTTGCCTTCCAACCCATTTGGATTCACTAAC...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTCATCAACATCATTGTaGCCTGCTGGAGTACCACCG +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCSSTSL*PAGVPP
Trigger: CGGTGGTACTCCAGCAGGCCACAATGATGTTGATGA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTAGAGGTGATCTCTCCTaGGTATTCAACCTGCCACGT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCRGDLS*VFNLPR
Trigger: ACGTGGCAGGTTGAATACCCAGGAGAGATCACCTCT...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCCTTCTTCTGGAAAGTTaGCCTCTTGGTGGTACTGCC +
Preference number: 4 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPLLLES*PLGGTA
Trigger: GGCAGTACCACCAAGAGGCCAACTTTCCAGAAGAAG...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCCGATATCAATCTTCATaGCTTCATAGGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCRYQSS*LHRRHQ
Trigger: CTGATGCCTCCTATGAAGTCATGAAGATTGATATCG...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATATGGACCTCCTGTCATTaGTATTCTCTACATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIWTSCH*YSLHEA
Trigger: GGCTTCATGTAGAGAATATCAATGACAGGAGGTCCA...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTAGTTCTTGGTCGTCTGTaGGCATGGCTCCTGTGGACC +
Preference number: 4 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVVLGRL*AWLLWT
Trigger: GGTCCACAGGAGCCATGCTCACAGACGACCAAGAAC...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCAATGAACAGCCACATTaGTATCCAAACGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCNEQPH*YPNAVP
Trigger: AGGAACTGCGTTTGGATAGCAATGTGGCTGTTCATT...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTACCAGCAGCTGATGGCTaGTTCCTGTTTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVPAADG*FLFGPL
Trigger: CAGAGGCCCAAACAGGAAGCAGCCATCAGCTGCTGG...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR GCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTAAGGGAACCTGCTTGTaGCTGTACTTCAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCKGTCL*LYFRAK
Trigger: TTTTGCCCTGAAGTACAGGCACAAGCAGGTTCCCTT...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTCGCTTTTCTGTTCTTaGTCGTCTGTGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCSLFCS*SSVSMA
Trigger: AGCCATGCTCACAGACGACCAAGAACAGAAAAGCGA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp GTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCTGGGACCTCCAGATGGCCGAGAATGTaGAAAATGTCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VYILETSLFTGICVPGTSRWPRM*KMSLFS
Trigger: GGAAAAGAGTGACATTTTCCACATTCTCGGCCATCT...GGAGGTCCCAGGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTAGCTCCTCTACCTGCATaGAGTCAGTTATCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVAPLPA*SQLSAP
Trigger: CGGAGCTGATAACTGACTTCATGCAGGTAGAGGAGC...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTGGTCTGAGAGAGGATaGTGTCATCTAACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCWSERG*CHLTGF
Trigger: AAAACCTGTTAGATGACATCATCCTCTCTCAGACCA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 72 bp CCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTaGAGGGATCGTAGAGACATTTTGACGTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PCLPYHLHRLSI*RDRRDILTLSN
Trigger: ATTGCTTAACGTCAAAATGTCTCTACGATCCCTCAAGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR TCA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATATCATTTCTTTCCCATTaGCAAAGACATAGTCACATC +
Preference number: 4 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSISFLSH*QRHSHI
Trigger: GATGTGACTATGTCTTTGTCAATGGGAAAGAAATGA...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CCA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTTATGCAAAGGGGGACTaGATTCATCAACATCATTGT +
Preference number: 4 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCYAKGD*IHQHHC
Trigger: ACAATGATGTTGATGAATCCAGTCCCCCTTTGCATA...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 72 bp GTTTCTTGGCATGTAGTTACAAAGCTAGTTGTGGGCTaGTTTACCCATTTCCTTTCTGCCCTGCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: VSWHVVTKLVVG*FTHFLSALLTS
Trigger: AGAGGTTAGCAGGGCAGAAAGGAAATGGGTAAACAAGCCCACAACTAGCTTTGTAACTACATGCCAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 72 bp CTTACAATCTACAATACATTCTACACGTGGAGGGATTaGCGAACAGGCATCTGCTGCAGTAGTCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LTIYNTFYTWRD*RTGICCSSQGN
Trigger: ATTTCCTTGACTACTGCAGCAGATGCCTGTTCGCAAATCCCTCCACGTGTAGAATGTATTGTAGATTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
3UTR CAA 72 bp CATAGACTCAGCATCTTGAGGGATCGTAGAGACATTTaGACGTTAAGCAATGCTAATCCTTTTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: HRLSILRDRRDI*TLSNANPFGDD
Trigger: ATCATCCCCAAAAGGATTAGCATTGCTTAACGTCAAAATGTCTCTACGATCCCTCAAGATGCTGAGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp CCTGAGCCATGGCAGTGGCAAAGATGGCTCTGTTGCTCCCGGGGCTaGGCTGCAGGGATAGCGAGAGCCCTGTTACCAGCTGGACCCCGA +
Preference number: 5 (lower is better)
Translates to: PEPWQWQRWLCCSRG*AAGIARALLPAGPR
Trigger: TCGGGGTCCAGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAGCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCATGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp GCCATGGCAGTGGCAAAGATGGCTCTGTTGCTCCCGGGGCTGAGCTaGAGGGATAGCGAGAGCCCTGTTACCAGCTGGACCCCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: AMAVAKMALLLPGLS*RDSESPVTSWTPRS
Trigger: AGACCTCGGGGTCCAGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAGCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp CTCCCGGGGCTGAGCTGCAGGGATAGCGAGAGCCCTGTTACCAGCTaGACCCCGAGGTCTGTGATGGTCACCTTCTCATCCAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: LPGLSCRDSESPVTS*TPRSVMVTFSSSTV
Trigger: CACTGTACTGGATGAGAAGGTGACCATCACAGACCTCGGGGTCCAGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAGCCCCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp TGGGTTGGAAGGCAACATCAAATCCTGGGGCACTACCTGCTCGAGTaGGAAGGGCCCGTAGCTGGCGTTGAGCACCGGCAGTCGCCTAGA +
Preference number: 5 (lower is better)
Translates to: WVGRQHQILGHYLLE*EGPVAGVEHRQSPR
Trigger: TCTAGGCGACTGCCGGTGCTCAACGCCAGCTACGGGCCCTTCTCACTCGAGCAGGTAGTGCCCCAGGATTTGATGTTGCCTTCCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp CAGCAGCTGATGGCTGCTTCCTGTTTGGGCCTCTGCAGAAGTTCCTaGGCCATGGCAGTGGCAAAGATGGCTCTGTTGCTCCCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QQLMAASCLGLCRSS*AMAVAKMALLLPGL
Trigger: CAGCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCATGGCTCAGGAACTTCTGCAGAGGCCCAAACAGGAAGCAGCCATCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp GGGTGTGACAGAGCCGTCGCTGAACTGCACCCAGCAGCTGATGGCTaGTTCCTGTTTGGGCCTCTGCAGAAGTTCCTGAGCCATGGCAGT +
Preference number: 5 (lower is better)
Translates to: GCDRAVAELHPAADG*FLFGPLQKFLSHGS
Trigger: ACTGCCATGGCTCAGGAACTTCTGCAGAGGCCCAAACAGGAAGCAGCCATCAGCTGCTGGGTGCAGTTCAGCGACGGCTCTGTCACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp GGTCACTCAGCCCCTTGGCTGCCTGATCAAGGTCATGTTCCTCAGTaGCCACATTGCTCCCGGGGAGGTCCATTTGGTCTGGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GHSAPWLPDQGHVPQ*PHCSRGGPFGLGSW
Trigger: CCAGCTTCCCAGACCAAATGGACCTCCCCGGGAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp TCTCTGAACGCAAAGACCCGCAGGCAAGGCAAGTTCTCGTCCCTGTaGTCATCCCAGTCTCGACCCACGATGTGGAAGAGCACCTGCACT +
Preference number: 5 (lower is better)
Translates to: SLNAKTRRQGKFSSL*SSQSRPTMWKSTCT
Trigger: AGTGCAGGTGCTCTTCCACATCGTGGGTCGAGACTGGGATGACCACAGGGACGAGAACTTGCCTTGCCTGCGGGTCTTTGCGTTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCATCCTCAGTGCCCACATaGCTCCCGGGGAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: DWGGGSPDHASLTISIDSSSVPT*LPGRSI
Trigger: AATGGACCTCCCCGGGAGCAATGTGGGCACTGAGGA...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp GGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAGCATCTAACAGCTCTGTCCGGTaGCTCAGCCCAACCCAGTCG +
Preference number: 5 (lower is better)
Translates to: GGGSPDHASLTISIDSASNSSVR*LSPTQS
Trigger: CGACTGGGTTGGGCTGAGCAACCGGACAGAGCTGTT...AGATGCTGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp AGAGCATACATGCCAATTTCGAGGTCACTCAGCCCCTTGGCTGCCTaGTCAAGGTCATGTTCCTCAGTGCCCACATTGCTCCCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RAYMPISRSLSPLAA*SRSCSSVPTLLPGR
Trigger: CCTCCCCGGGAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCATGTATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp GGGAGGAGGCGAAGTTCATATGGTTCCCCAACAGCTCTGTCCGGTTaGTCAGCCCAACCCAGTCGTGAGAGTGACTCAGACCTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GRRRSSYGSPTALSG*SAQPSRESDSDLLA
Trigger: AGCAAGAAGGTCTGAGTCACTCTCACGACTGGGTTGGGCTGAGCAACCGGACAGAGCTGTTGGGGAACCATATGAACTTCGCCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp TCAATGGCAGTGATCTGCTCCTCTTGGGAGGAGGCGAAGTTCATATaGTTCCCCAACAGCTCTGTCCGGTTGCTCAGCCCAACCCAGTCG +
Preference number: 5 (lower is better)
Translates to: SMAVICSSWEEAKFI*FPNSSVRLLSPTQS
Trigger: CGACTGGGTTGGGCTGAGCAACCGGACAGAGCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCATGGAAAGTTGGCCTCTaGGTGGTACTGCCCCATCCC +
Preference number: 5 (lower is better)
Translates to: DWGGGSPDHASLTISIDSWKVGL*VVLPHP
Trigger: GGGATGGGGCAGTACCACCAAGAGGCCAACTTTCCA...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp GGTGGACTGCTGGGGGTCTCCCGAAGGAAGACGCTCCCAATTCTATaGAAAGGGGGACTGGATTCATCAACATCATTGTGGCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GGLLGVSRRKTLPIL*KGGLDSSTSLWPAG
Trigger: TCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCATAGAATTGGGAGCGTCTTCCTTCGGGAGACCCCCAGCAGTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp ATAGTGGTCATGCCCAGCTCCTGGCCAGTCAGGATCTGCCCTCCTTaGAGCTTAGCAATCCTGGGCTCCTCTACCTGCATGAAGTCAGTT +
Preference number: 5 (lower is better)
Translates to: IVVMPSSWPVRICPP*SLAILGSSTCMKSV
Trigger: AACTGACTTCATGCAGGTAGAGGAGCCCAGGATTGCTAAGCTGCAAGGAGGGCAGATCCTGACTGGCCAGGAGCTGGGCATGACCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp CACCCAGCAGAGCATACATGCCAATTTCGAGGTCACTCAGCCCCTTaGCTGCCTGATCAAGGTCATGTTCCTCAGTGCCCACATTGCTCC +
Preference number: 5 (lower is better)
Translates to: HPAEHTCQFRGHSAP*LPDQGHVPQCPHCS
Trigger: GGAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCATGTATGCTCTGCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp TCCTCAAAGTCCAGACCCCTGTCAATGGCAGTGATCTGCTCCTCTTaGGAGGAGGCGAAGTTCATATGGTTCCCCAACAGCTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SSKSRPLSMAVICSS*EEAKFIWFPNSSVR
Trigger: CCGGACAGAGCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp GATTGGGGTGGGGGATCTCCTGACCATGCCTCCCTTACCATCTCCATAGACTCAATGGCTGCTTCCTGTTaGGGCCTCTGCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: DWGGGSPDHASLTISIDSMAASC*GLCRSS
Trigger: GGAACTTCTGCAGAGGCCCAAACAGGAAGCAGCCAT...TGAGTCTATGGAGATGGTAAGGGAGGCATGGTCAGGAGATCCCCCACCCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCGCAAAGATGGCTCTGTaGCTCCCGGGGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPAKMAL*LPGLSC
Trigger: GCAGCTCAGCCCCGGGAGCAACAGAGCCATCTTTGC...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCCCCGGGGAGGTCCATTaGGTCTGGGAAGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPPGEVH*VWEAGE
Trigger: CTCACCAGCTTCCCAGACCAAATGGACCTCCCCGGG...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TGTGGACAGTGCTGCCCTTGTGGTGTCCTCTTGTCTCATTTCTCCCCTGGGTACAGTGATCTGCTCCTCTaGGGAGGAGGCGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: CGQCCPCGVLLSHFSPGYSDLLL*GGGEVH
Trigger: ATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACT...GTACCCAGGGGAGAAATGAGACAAGAGGACACCACAAGGGCAGCACTGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp GAAGGAGTTTGCTCTCCTCAAAGTCCAGACCCCTGTCAATGGCAGTaGTCTGCTCCTCTTGGGAGGAGGCGAAGTTCATATGGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EGVCSPQSPDPCQWQ*SAPLGRRRSSYGSP
Trigger: TGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGAGAGCAAACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 90 bp AGTTTGCTCTCCTCAAAGTCCAGACCCCTGTCAATGGCAGTGATCTaGTCCTCTTGGGAGGAGGCGAAGTTCATATGGTTCCCCAACAGC +
Preference number: 5 (lower is better)
Translates to: SLLSSKSRPLSMAVI*SSWEEAKFIWFPNS
Trigger: GCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGAGAGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCCGCATGATGTCCTGGTaGGCCTCCTTCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCRMMSW*ASFRKK
Trigger: CTTCTTCCTGAAGGAGGCCAACCAGGACATCATGCG...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp GACAGGAGACCCAACATGAGGGGTGGCAGAGCCCATCACAAAACAGGTTCTCTAGCCTTCAGCCTCCAGTaGAGGGAGAATGTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: DRRPNMRGGRAHHKTGSLAFSLQ*RENVLV
Trigger: CACTAACACATTCTCCCTCAACTGGAGGCTGAAGGC...TAGAGAACCTGTTTTGTGATGGGCTCTGCCACCCCTCATGTTGGGTCTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCCGAGCTGGCCTTTTGTaGGAGACAATGGGGACCCGC +
Preference number: 5 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPRAGLL*ETMGTR
Trigger: GCGGGTCCCCATTGTCTCCAACAAAAGGCCAGCTCG...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCCGCCTCAGCCACAAATaGGGTCAAGACTCGCACCAT +
Preference number: 5 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCRLSHK*GQDSHH
Trigger: ATGGTGCGAGTCTTGACCCAATTTGTGGCTGAGGCG...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TACTTCGAGTTAGCCCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTGACCCTTCTTCTGGAAAGTaGGCCTCTTGGTGGTACTGC +
Preference number: 5 (lower is better)
Translates to: YFELALLIHSDAMPLASDPSSGK*ASWWYC
Trigger: GCAGTACCACCAAGAGGCCAACTTTCCAGAAGAAGG...GTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGGGCTAACTCGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TACTTCGAGTTAGCCCTGCTGATCCACTCAGATGCCATGCCTCTTGCCTCTGACGTGACTCAGACCTTCTaGCTCCTCAAAGGGAACCTG +
Preference number: 5 (lower is better)
Translates to: YFELALLIHSDAMPLASDVTQTF*LLKGNL
Trigger: CAGGTTCCCTTTGAGGAGCAAGAAGGTCTGAGTCAC...GTCAGAGGCAAGAGGCATGGCATCTGAGTGGATCAGCAGGGCTAACTCGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp GGCCTTCAGCCTCCAGTTGAGGGAGAATGTGTTAGTGAATCCAAATaGGTTGGAAGGCAACATCAAATCCTGGGGCACTACCTGCTCGAG +
Preference number: 5 (lower is better)
Translates to: GLQPPVEGECVSESK*VGRQHQILGHYLLE
Trigger: CTCGAGCAGGTAGTGCCCCAGGATTTGATGTTGCCTTCCAACCCATTTGGATTCACTAACACATTCTCCCTCAACTGGAGGCTGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp GAGAGGATGATGTCATCTAACAGGTTTTCCTGGCCTTCCTTCTTCTaGAAAGTTGGCCTCTTGGTGGTACTGCCCCATCCCTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: ERMMSSNRFSWPSFF*KVGLLVVLPHPSMS
Trigger: GCTCATGGAGGGATGGGGCAGTACCACCAAGAGGCCAACTTTCCAGAAGAAGGAAGGCCAGGAAAACCTGTTAGATGACATCATCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TCTGAGTCCTGTTTACATTCTGGAGACCAGTCTCTTCACAGGGATATGTGTCCCATGAGCATCTCAACCTaGACCAGGGCCCCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SESCLHSGDQSLHRDMCPMSIST*TRAPCP
Trigger: AGGACAGGGGGCCCTGGTCAAGGTTGAGATGCTCAT...GGGACACATATCCCTGTGAAGAGACTGGTCTCCAGAATGTAAACAGGACTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATAATAGGCCACTTGAATTaGGGGTCCTGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIIGHLN*GSWRME
Trigger: CTCCATCCTCCAGGACCCCAAATTCAAGTGGCCTAT...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCGAGCTGAGAAGGAGTTaGCTCTCCTCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCELRRS*LSSKSR
Trigger: TCTGGACTTTGAGGAGAGCAAACTCCTTCTCAGCTC...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp TCCTGTGGACCTGAACATCTGTCCATTGATGCTGTTCTGAGAGTTTaGGCTGAGAAGGAGTTTGCTCTCCTCAAAGTCCAGACCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SCGPEHLSIDAVLRV*AEKEFALLKVQTPV
Trigger: GACAGGGGTCTGGACTTTGAGGAGAGCAAACTCCTTCTCAGCTCAAACTCTCAGAACAGCATCAATGGACAGATGTTCAGGTCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 90 bp CCTTCGTTTTCTGCAGCAATGATAGGCCACTTGAATTTGGGGTCCTaGAGGATGGAGACAACCTTCTCATCCAAGGATGTAGCCATCAGG +
Preference number: 5 (lower is better)
Translates to: PSFSAAMIGHLNLGS*RMETTFSSKDVAIR
Trigger: CCTGATGGCTACATCCTTGGATGAGAAGGTTGTCTCCATCCTCCAGGACCCCAAATTCAAGTGGCCTATCATTGCTGCAGAAAACGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CTGTCAATAATCCCTGGCCAACTTGGACCCCCATCTTTGGGAACCAGCTCAATACCACTCTCACTGCTGTaGGGGTTTGCATCATTCTGT +
Preference number: 5 (lower is better)
Translates to: LSIIPGQLGPPSLGTSSIPLSLL*GFASFC
Trigger: ACAGAATGATGCAAACCCCAACAGCAGTGAGAGTGG...TATTGAGCTGGTTCCCAAAGATGGGGGTCCAAGTTGGCCAGGGATTATTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 90 bp AGCATATTTCCCAGTGTACTCAGTGCTCTGTCTGACATCCCAGATTaGAGAGCTGCTGGCTCTCACCCCAACAATGCTCACTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SIFPSVLSALSDIPD*RAAGSHPNNAHSFL
Trigger: AAGAAAGGAGTGAGCATTGTTGGGGTGAGAGCCAGCAGCTCTTCAATCTGGGATGTCAGACAGAGCACTGAGTACACTGGGAAATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp ATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTGTGTGAATCCAAATGGGTaGGAAGGCAACATCAAATCC +
Preference number: 5 (lower is better)
Translates to: IPLYTCIHLPIPAHLSCCVNPNG*EGNIKS
Trigger: GGATTTGATGTTGCCTTCCAACCCATTTGGATTCAC...ACAGCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp CGCATACCCTTATACACATGCATACACCTACCCATACCCGCTCACCTCTCATGCTTCAATCAAGTCCTTTaGGCTCACATAGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: RIPLYTCIHLPIPAHLSCFNQVL*AHIDLG
Trigger: TCCAAGATCTATGTGAGCCAAAAGGACTTGATTGAA...GCATGAGAGGTGAGCGGGTATGGGTAGGTGTATGCATGTGTATAAGGGTATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp ACAGGCATCTGCTGCAGTAGTCAAGGAAATGTCACATGGGTAAGAAGGGGAAAGCACTGCTGTTGGGGTTaGCATCATTCTGTCCAAATT +
Preference number: 5 (lower is better)
Translates to: TGICCSSQGNVTWVRRGKHCCWG*HHSVQI
Trigger: AATTTGGACAGAATGATGCAAACCCCAACAGCAGTG...CTTTCCCCTTCTTACCCATGTGACATTTCCTTGACTACTGCAGCAGATGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTATCAAAGGGAACCTGCTaGTGCCTGTACTTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVSKGTC*CLYFRA
Trigger: TGCCCTGAAGTACAGGCACAAGCAGGTTCCCTTTGA...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS-3UTR CAA 90 bp TGTCCTATAGACAGGAAGTTTCTCTCAACTGCTCCAGTGATATATGTGTGTGTAACTACCACGTTCACCTaGCCCTTCATTTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPIDRKFLSTAPVIYVCVTTTFT*PFISFP
Trigger: TGGGAAAGAAATGAAGGGCAAGGTGAACGTGGTAGT...TACACACACATATATCACTGGAGCAGTTGAGAGAAACTTCCTGTCTATAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TGGCTGCTCCGTGGGCCTCCTGCGCCCAGATACCACTaGTGGTGGACTGAACCAGCCCGGCAGCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: WLLRGPPAPRYH*WWTEPARQHLQ
Trigger: CTGGAGATGCTGCCGGGCTGGTTCAGTCCACCATCAGTGGTATCTGGGCGCAGGAGGCCCACGGAGCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp GTGGCAAAGATGGCTCTGTTGCTCCCGGGGCTGAGCTaGAGGGATAGCGAGAGCCCTGTTACCAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: VAKMALLLPGLS*RDSESPVTSWT
Trigger: GGTCCAGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAGCCCCGGGAGCAACAGAGCCATCTTTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TGGCAGTGGCAAAGATGGCTCTGTTGCTCCCGGGGCTaGGCTGCAGGGATAGCGAGAGCCCTGTTACCAGCT +
Preference number: 6 (lower is better)
Translates to: WQWQRWLCCSRG*AAGIARALLPA
Trigger: AGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAGCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp AATACAGTTCCACGGGATTCCCCTCTGGCTGCTCCGTaGGCCTCCTGCGCCCAGATACCACTGATGGTGGAC +
Preference number: 6 (lower is better)
Translates to: NTVPRDSPLAAP*ASCAQIPLMVD
Trigger: GTCCACCATCAGTGGTATCTGGGCGCAGGAGGCCCACGGAGCAGCCAGAGGGGAATCCCGTGGAACTGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp TCCTCAGTGCCCACATTGCTCCCGGGGAGGTCCATTTaGTCTGGGAAGCTGGTGAGGTCTGTGGCCATGGTC +
Preference number: 6 (lower is better)
Translates to: SSVPTLLPGRSI*SGKLVRSVAMV
Trigger: GACCATGGCCACAGACCTCACCAGCTTCCCAGACCAAATGGACCTCCCCGGGAGCAATGTGGGCACTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp CCTGCTGGAGTACCACCGCTCTTCCTCGAATCCTCCTaGGCACAGTCGCCTCGCTCATCCCCTGGCTGTACA +
Preference number: 6 (lower is better)
Translates to: PAGVPPLFLESS*AQSPRSSPGCT
Trigger: TGTACAGCCAGGGGATGAGCGAGGCGACTGTGCCAAGGAGGATTCGAGGAAGAGCGGTGGTACTCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TCGGCAAGGATGGCATCCGACAGAGGGGACAGGATCTaGATAGTGGTCATGCCCAGCTCCTGGCCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: SARMASDRGDRI*IVVMPSSWPVR
Trigger: CCTGACTGGCCAGGAGCTGGGCATGACCACTATTCAGATCCTGTCCCCTCTGTCGGATGCCATCCTTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp ATGCCCAGCTCCTGGCCAGTCAGGATCTGCCCTCCTTaGAGCTTAGCAATCCTGGGCTCCTCTACCTGCATG +
Preference number: 6 (lower is better)
Translates to: MPSSWPVRICPP*SLAILGSSTCM
Trigger: CATGCAGGTAGAGGAGCCCAGGATTGCTAAGCTGCAAGGAGGGCAGATCCTGACTGGCCAGGAGCTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp GCCCCTTGGCTGCCTGATCAAGGTCATGTTCCTCAGTaGCCACATTGCTCCCGGGGAGGTCCATTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: APWLPDQGHVPQ*PHCSRGGPFGL
Trigger: CAGACCAAATGGACCTCCCCGGGAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp GCAAAGACCCGCAGGCAAGGCAAGTTCTCGTCCCTGTaGTCATCCCAGTCTCGACCCACGATGTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: AKTRRQGKFSSL*SSQSRPTMWKS
Trigger: GCTCTTCCACATCGTGGGTCGAGACTGGGATGACCACAGGGACGAGAACTTGCCTTGCCTGCGGGTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp CTGTACAGCATAATACAGTTCCACGGGATTCCCCTCTaGCTGCTCCGTGGGCCTCCTGCGCCCAGATACCAC +
Preference number: 6 (lower is better)
Translates to: LYSIIQFHGIPL*LLRGPPAPRYH
Trigger: GTGGTATCTGGGCGCAGGAGGCCCACGGAGCAGCCAGAGGGGAATCCCGTGGAACTGTATTATGCTGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp CTGAGCTGCAGGGATAGCGAGAGCCCTGTTACCAGCTaGACCCCGAGGTCTGTGATGGTCACCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: LSCRDSESPVTS*TPRSVMVTFSS
Trigger: GGATGAGAAGGTGACCATCACAGACCTCGGGGTCCAGCTGGTAACAGGGCTCTCGCTATCCCTGCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp CTTCCTGTTTGGGCCTCTGCAGAAGTTCCTGAGCCATaGCAGTGGCAAAGATGGCTCTGTTGCTCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: LPVWASAEVPEP*QWQRWLCCSRG
Trigger: GCCCCGGGAGCAACAGAGCCATCTTTGCCACTGCCATGGCTCAGGAACTTCTGCAGAGGCCCAAACAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp CTGCCTGATCAAGGTCATGTTCCTCAGTGCCCACATTaGTCCCGGGGAGGTCCATTTGGTCTGGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPDQGHVPQCPH*SRGGPFGLGSW
Trigger: CCAGCTTCCCAGACCAAATGGACCTCCCCGGGAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp AGCCACATTGCTATCCAAACGCAGTTCCTTCAAAGGTaGACTGCTGGGGGTCTCCCGAAGGAAGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: SHIAIQTQFLQR*TAGGLPKEDAP
Trigger: GGGAGCGTCTTCCTTCGGGAGACCCCCAGCAGTCCACCTTTGAAGGAACTGCGTTTGGATAGCAATGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp GTGATCTGCTCCTCTTGGGAGGAGGCGAAGTTCATATaGTTCCCCAACAGCTCTGTCCGGTTGCTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: VICSSWEEAKFI*FPNSSVRLLSP
Trigger: TGGGCTGAGCAACCGGACAGAGCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp TCATCATCTTCCTCCTCACTGTCCCGAGCTGGCCTTTaGTTGGAGACAATGGGGACCCGCCAGCCCTTGATC +
Preference number: 6 (lower is better)
Translates to: SSSSSSLSRAGL*LETMGTRQPLI
Trigger: GATCAAGGGCTGGCGGGTCCCCATTGTCTCCAACAAAAGGCCAGCTCGGGACAGTGAGGAGGAAGATGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 90 bp CTCCTCAAAGTCCAGACCCCTGTCAATGGCAGTGATCTGCTCCTCTaGGGAGGAGGCGAAGTTCATATGGTTCCCCAACAGCTCTGTCCG +
Preference number: 6 (lower is better)
Translates to: LLKVQTPVNGSDLLL*GGGEVHMVPQQLCP
Trigger: CGGACAGAGCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp CGAAGTTCATATGGTTCCCCAACAGCTCTGTCCGGTTaGTCAGCCCAACCCAGTCGTGAGAGTGACTCAGAC +
Preference number: 6 (lower is better)
Translates to: RSSYGSPTALSG*SAQPSRESDSD
Trigger: GTCTGAGTCACTCTCACGACTGGGTTGGGCTGAGCAACCGGACAGAGCTGTTGGGGAACCATATGAACTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp AGGGGGACTGGATTCATCAACATCATTGTGGCCTGCTaGAGTACCACCGCTCTTCCTCGAATCCTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RGTGFINIIVAC*STTALPRILLG
Trigger: GCCAAGGAGGATTCGAGGAAGAGCGGTGGTACTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp TCCAGACCCCTGTCAATGGCAGTGATCTGCTCCTCTTaGGAGGAGGCGAAGTTCATATGGTTCCCCAACAGC +
Preference number: 6 (lower is better)
Translates to: SRPLSMAVICSS*EEAKFIWFPNS
Trigger: GCTGTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp CCCAGTGTACTCAGTGCTCTGTCTGACATCCCAGATTaGAGAGCTGCTGGCTCTCACCCCAACAATGCTCAC +
Preference number: 6 (lower is better)
Translates to: PSVLSALSDIPD*RAAGSHPNNAH
Trigger: GTGAGCATTGTTGGGGTGAGAGCCAGCAGCTCTTCAATCTGGGATGTCAGACAGAGCACTGAGTACACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp CCGGAGCATATTTCCCAGTGTACTCAGTGCTCTGTCTaGCATCCCAGATTGAAGAGCTGCTGGCTCTCACCC +
Preference number: 6 (lower is better)
Translates to: PEHISQCTQCSV*HPRLKSCWLSP
Trigger: GGGTGAGAGCCAGCAGCTCTTCAATCTGGGATGTCAGACAGAGCACTGAGTACACTGGGAAATATGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp ATGCCAATTTCGAGGTCACTCAGCCCCTTGGCTGCCTaGTCAAGGTCATGTTCCTCAGTGCCCACATTGCTC +
Preference number: 6 (lower is better)
Translates to: MPISRSLSPLAA*SRSCSSVPTLL
Trigger: GAGCAATGTGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp GAGCATACATGCCAATTTCGAGGTCACTCAGCCCCTTaGCTGCCTGATCAAGGTCATGTTCCTCAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: EHTCQFRGHSAP*LPDQGHVPQCP
Trigger: TGGGCACTGAGGAACATGACCTTGATCAGGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCATGTATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp GCTCTCACCCCAACAATGCTCACTCCTTTCTTAACCTaGGCCCTCAGTGTGAAGCGATCCTCCGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: ALTPTMLTPFLT*ALSVKRSSVQF
Trigger: GAACTGCACGGAGGATCGCTTCACACTGAGGGCCAAGGTTAAGAAAGGAGTGAGCATTGTTGGGGTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp GCCTTTTGTTGGAGACAATGGGGACCCGCCAGCCCTTaGTCTGGTTCAACTCCATGTCTGAGACCTCAATCT +
Preference number: 6 (lower is better)
Translates to: AFCWRQWGPASP*SGSTPCLRPQS
Trigger: AGATTGAGGTCTCAGACATGGAGTTGAACCAGATCAAGGGCTGGCGGGTCCCCATTGTCTCCAACAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TGCTCTCCTCAAAGTCCAGACCCCTGTCAATGGCAGTaGTCTGCTCCTCTTGGGAGGAGGCGAAGTTCATAT +
Preference number: 6 (lower is better)
Translates to: CSPQSPDPCQWQ*SAPLGRRRSSY
Trigger: ATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp CTATGCAAAGGGGGACTGGATTCATCAACATCATTGTaGCCTGCTGGAGTACCACCGCTCTTCCTCGAATCC +
Preference number: 6 (lower is better)
Translates to: LCKGGLDSSTSL*PAGVPPLFLES
Trigger: GGATTCGAGGAAGAGCGGTGGTACTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp TGCTATCCAAACGCAGTTCCTTCAAAGGTGGACTGCTaGGGGTCTCCCGAAGGAAGACGCTCCCAATTCTAT +
Preference number: 6 (lower is better)
Translates to: CYPNAVPSKVDC*GSPEGRRSQFY
Trigger: ATAGAATTGGGAGCGTCTTCCTTCGGGAGACCCCCAGCAGTCCACCTTTGAAGGAACTGCGTTTGGATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp GACTTCTGGCAAGATTCACTGATGAGCATCTCAACCTaGACCAGGGCCCCCTGTCCTTCGTTTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: DFWQDSLMSIST*TRAPCPSFSAA
Trigger: TGCTGCAGAAAACGAAGGACAGGGGGCCCTGGTCAAGGTTGAGATGCTCATCAGTGAATCTTGCCAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 90 bp ACGCTCCCAATTCTATGCAAAGGGGGACTGGATTCATCAACATCATaGTGGCCTGCTGGAGTACCACCGCTCTTCCTCGAATCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TLPILCKGGLDSSTS*WPAGVPPLFLESSL
Trigger: CAAGGAGGATTCGAGGAAGAGCGGTGGTACTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCATAGAATTGGGAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 90 bp TTCCGCTTAGACTTCTGGCAAGATTCACTGATGAGCATCTCAACCTaGACCAGGGCCCCCTGTCCTTCGTTTTCTGCAGCAATGATAGGC +
Preference number: 6 (lower is better)
Translates to: FRLDFWQDSLMSIST*TRAPCPSFSAAMIG
Trigger: GCCTATCATTGCTGCAGAAAACGAAGGACAGGGGGCCCTGGTCAAGGTTGAGATGCTCATCAGTGAATCTTGCCAGAAGTCTAAGCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TCAGCCACACTCTTTTCGGAGCCAGCAGATTTCTTCTaGCAAACGATGACGGCCGGAGCATATTTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: SATLFSEPADFF*QTMTAGAYFPV
Trigger: CACTGGGAAATATGCTCCGGCCGTCATCGTTTGTCAGAAGAAATCTGCTGGCTCCGAAAAGAGTGTGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp GGCTTTTTGGACCTCCTGTCATTGATATTCTCTACATaGAGCCCAGCCCCAAGGTGTCCACTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: GFLDLLSLIFST*SPAPRCPLSLL
Trigger: CAGCAGTGAGAGTGGACACCTTGGGGCTGGGCTTCATGTAGAGAATATCAATGACAGGAGGTCCAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp TTGATCTGGTTCAACTCCATGTCTGAGACCTCAATCTaGAGAGGTAGCCGTGGTACCCACACTGTCATCTCC +
Preference number: 6 (lower is better)
Translates to: LIWFNSMSETSI*RGSRGTHTVIS
Trigger: GGAGATGACAGTGTGGGTACCACGGCTACCTCTGCAGATTGAGGTCTCAGACATGGAGTTGAACCAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp CCTGGAGACAGAGATAGGGAAGGTGAGTACATCTCCTaGCCGCACAGTCTTAGGGACATAATGAACAGCCAC +
Preference number: 6 (lower is better)
Translates to: PGDRDREGEYIS*PHSLRDIMNSH
Trigger: GTGGCTGTTCATTATGTCCCTAAGACTGTGCGGCAAGGAGATGTACTCACCTTCCCTATCTCTGTCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 90 bp CGTGCAGTTCCTGGAGACAGAGATAGGGAAGGTGAGTACATCTCCTaGCCGCACAGTCTTAGGGACATAATGAACAGCCACATTGCTATC +
Preference number: 6 (lower is better)
Translates to: RAVPGDRDREGEYIS*PHSLRDIMNSHIAI
Trigger: GATAGCAATGTGGCTGTTCATTATGTCCCTAAGACTGTGCGGCAAGGAGATGTACTCACCTTCCCTATCTCTGTCTCCAGGAACTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp TCTTTTCGGAGCCAGCAGATTTCTTCTGACAAACGATaGCGGCCGGAGCATATTTCCCAGTGTACTCAGTGC +
Preference number: 6 (lower is better)
Translates to: SFRSQQISSDKR*RPEHISQCTQC
Trigger: GCACTGAGTACACTGGGAAATATGCTCCGGCCGTCATCGTTTGTCAGAAGAAATCTGCTGGCTCCGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS TCA 72 bp GGTCACTGGGTGCTTCGACCTCGATATCAATCTTCATaGCTTCATAGGAGGCATCAGCCACACTCTTTTCGG +
Preference number: 6 (lower is better)
Translates to: GHWVLRPRYQSS*LHRRHQPHSFR
Trigger: CCGAAAAGAGTGTGGCTGATGCCTCCTATGAAGTCATGAAGATTGATATCGAGGTCGAAGCACCCAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS GCA 72 bp AGCCCCAAGGTGTCCACTCTCACTGCTGTTGGGGTTTaGATCATTCTGTCCAAATTTAACCTTGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: SPKVSTLTAVGV*IILSKFNLDAG
Trigger: GCCAGCATCAAGGTTAAATTTGGACAGAATGATGCAAACCCCAACAGCAGTGAGAGTGGACACCTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp GAAGGAAGACGCTCCCAATTCTATGCAAAGGGGGACTaGATTCATCAACATCATTGTGGCCTGCTGGAGTAC +
Preference number: 6 (lower is better)
Translates to: EGRRSQFYAKGD*IHQHHCGLLEY
Trigger: GTACTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCATAGAATTGGGAGCGTCTTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp ATTCTATGCAAAGGGGGACTGGATTCATCAACATCATaGTGGCCTGCTGGAGTACCACCGCTCTTCCTCGAA +
Preference number: 6 (lower is better)
Translates to: ILCKGGLDSSTS*WPAGVPPLFLE
Trigger: TTCGAGGAAGAGCGGTGGTACTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCATAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CAA 72 bp CCTTCGTTTTCTGCAGCAATGATAGGCCACTTGAATTaGGGGTCCTGGAGGATGGAGACAACCTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: PSFSAAMIGHLN*GSWRMETTFSS
Trigger: GGATGAGAAGGTTGTCTCCATCCTCCAGGACCCCAAATTCAAGTGGCCTATCATTGCTGCAGAAAACGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8
CDS CCA 72 bp CCTCCAGTTGAGGGAGAATGTGTTAGTGAATCCAAATaGGTTGGAAGGCAACATCAAATCCTGGGGCACTAC +
Preference number: 6 (lower is better)
Translates to: PPVEGECVSESK*VGRQHQILGHY
Trigger: GTAGTGCCCCAGGATTTGATGTTGCCTTCCAACCCATTTGGATTCACTAACACATTCTCCCTCAACTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044441.8