RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034324

Ensembl transcript IDs: ENSMUST00000119026.8, ENSMUST00000145748.2

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTCCACTaGGAGCTCCTTCCGTTCAGCTACTCTGCTGAGGGAGGTCGGGAA +
Preference number: 1 (lower is better)
Translates to: ATWYSVGPRFPHSVH*ELLPFSYSAEGGRE
Trigger: TTCCCGACCTCCCTCAGCAGAGTAGCTGAACGGAAGGAGCTCTCAGTGGACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 90 bp CCACTGAGTCTCTGTCTCCATAGGGAGTGGCCAGGTGTCACAGGCTaGACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAAC +
Preference number: 1 (lower is better)
Translates to: PLSLCLHREWPGVTG*TLFSWPYPIQIAVN
Trigger: GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGAGACAGAGACTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 90 bp ATTTCACTCACAGCTCTTCACATAGAGGCATCCCTATGCCCAAACTaGCGGAGACACCCACTGAGTCTCTGTCTCCATAGGGAGTGGCCA +
Preference number: 1 (lower is better)
Translates to: ISLTALHIEASLCPN*RRHPLSLCLHREWP
Trigger: TGGCCACTCCCTATGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCTATGTGAAGAGCTGTGAGTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR TCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCATTCTTCCTAAGAGGTaGCCATTGTTCAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTILPKR*PLFRCA
Trigger: GGCACATCTGAACAATGGTCACCTCTTAGGAAGAAT...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR GCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAATAGAGGCATCCCTATaGCCAAACTGCCGGAGACAC +
Preference number: 2 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSIEASL*PNCRRH
Trigger: GTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCTAT...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR CCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCCTACCTGGTATTCTGTaGGCCCCAGATTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCLPGIL*APDFLT
Trigger: AGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAG...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR CCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAAGAGACTCAAACTTCTaGAAACCTACCATCCTTTGC +
Preference number: 2 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSRDSNF*KPTILC
Trigger: GCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCT...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATACTCTGCCTCGCTGCTaGGTCAGAGACTCAAACTTC +
Preference number: 2 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDTLPRC*VRDSNF
Trigger: GAAGTTTGAGTCTCTGACTCAGCAGCGAGGCAGAGT...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR CCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAGGAAAATGTACCACTTaGTCCTCAGAAATAAACATG +
Preference number: 2 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSGKCTT*SSEINM
Trigger: CATGTTTATTTCTGAGGACCAAGTGGTACATTTTCC...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR GCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAGGGGAACTGCACACTTaGTATATTGTTAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSGELHT*YIVKTK
Trigger: TTTTGTTTTAACAATATAGCAAGTGTGCAGTTCCCC...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp AGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTaGGTCTCTGTCTCCATAGGGAGTGGCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: RHPYAQTAGDTH*VSVSIGSGQVS
Trigger: TGACACCTGGCCACTCCCTATGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CCA 72 bp CGGAGACACCCACTGAGTCTCTGTCTCCATAGGGAGTaGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: RRHPLSLCLHRE*PGVTGCTLFSW
Trigger: CCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGAGACAGAGACTCAGTGGGTGTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACAGATGTGCCTCTCCTaGGGCAGAAGGCTAACAGAC +
Preference number: 3 (lower is better)
Translates to: RGIPMPKLPETPTESLSPQMCLS*GRRLTD
Trigger: GTCTGTTAGCCTTCTGCCCAAGGAGAGGCACATCTG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp AGTCCACTGAGAGCTCCTTCCGTTCAGCTACTCTGCTaGGGGAGGTCGGGAAGGAGGCTACTGTCCCAAGTT +
Preference number: 3 (lower is better)
Translates to: SPLRAPSVQLLC*GRSGRRLLSQV
Trigger: AACTTGGGACAGTAGCCTCCTTCCCGACCTCCCTCAGCAGAGTAGCTGAACGGAAGGAGCTCTCAGTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp ACCCAAACAATGGCCGTCCCCTGGTCTCTCTGTGAATaGTGCTCTGCTGAGGGTCACAGTGCCCAACATCCT +
Preference number: 3 (lower is better)
Translates to: TQTMAVPWSLCE*CSAEGHSAQHP
Trigger: AGGATGTTGGGCACTGTGACCCTCAGCAGAGCAGCATTCACAGAGAGACCAGGGGACGGCCATTGTTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CCA 72 bp TCACAGTGCCCAACATCCTCTCCCTCAGCTGATGGATaGAGAGCGCCAGGCTCCGGACATCCTAGTTCATTT +
Preference number: 3 (lower is better)
Translates to: SQCPTSSPSADG*RAPGSGHPSSF
Trigger: AAATGAACTAGGATGTCCGGAGCCTGGCGCTCTCCATCCATCAGCTGAGGGAGAGGATGTTGGGCACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp TATTCTGTGGGCCCCAGATTTCCTCACTCAGTCCACTaGGAGCTCCTTCCGTTCAGCTACTCTGCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: YSVGPRFPHSVH*ELLPFSYSAEG
Trigger: TCCCTCAGCAGAGTAGCTGAACGGAAGGAGCTCTCAGTGGACTGAGTGAGGAAATCTGGGGCCCACAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp ACAGCTCTTCACATAGAGGCATCCCTATGCCCAAACTaGCGGAGACACCCACTGAGTCTCTGTCTCCATAGG +
Preference number: 3 (lower is better)
Translates to: TALHIEASLCPN*RRHPLSLCLHR
Trigger: CCTATGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCTATGTGAAGAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp CTCTGTCTCCATAGGGAGTGGCCAGGTGTCACAGGCTaGACTCTGTTCTCTTGGCCATACCCTATTCAGATA +
Preference number: 3 (lower is better)
Translates to: LCLHREWPGVTG*TLFSWPYPIQI
Trigger: TATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp GAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCTaGGTCAGAGACTCAAACTTCTGGAAACCTACCATC +
Preference number: 3 (lower is better)
Translates to: EQFSFGSTLPRC*VRDSNFWKPTI
Trigger: GATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp CTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTaGCTCGCTGCTGAGTCAGAGACTCAAACTTCTGGA +
Preference number: 3 (lower is better)
Translates to: LSCLSSSLSDPL*LAAESETQTSG
Trigger: TCCAGAAGTTTGAGTCTCTGACTCAGCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp ATTTCACTCACAGCTCTTCACATAGAGGCATCCCTATaGCCAAACTGCCGGAGACACCCACTGAGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: ISLTALHIEASL*PNCRRHPLSLC
Trigger: ACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCTATGTGAAGAGCTGTGAGTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CCA 72 bp TGGCCCATCTGCCTGACTCTGCACACCTCGAGTTTATaGATTTCACTCACAGCTCTTCACATAGAGGCATCC +
Preference number: 3 (lower is better)
Translates to: WPICLTLHTSSL*ISLTALHIEAS
Trigger: GGATGCCTCTATGTGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp TCGGCTGTATCTTGTGGTAGACATGGCCCATCTGCCTaGCTCTGCACACCTCGAGTTTATGGATTTCACTCA +
Preference number: 3 (lower is better)
Translates to: SAVSCGRHGPSA*LCTPRVYGFHS
Trigger: TGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATGGGCCATGTCTACCACAAGATACAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CCA 72 bp CCCTATTCAGATAGCTGTGAACATTATTCCACTCATTaGCCTGACCCGGCTGATGACAGATTGTGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: PYSDSCEHYSTH*PDPADDRLWGA
Trigger: TGCACCCCACAATCTGTCATCAGCCGGGTCAGGCCAATGAGTGGAATAATGTTCACAGCTATCTGAATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CCA 72 bp GAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTaGCCATACCCTATTCAGATAGCTGTGAACATTATT +
Preference number: 3 (lower is better)
Translates to: EWPGVTGCTLFS*PYPIQIAVNII
Trigger: AATAATGTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR GCA 72 bp CCAGGCTCCGGACATCCTAGTTCATTTGATCCCTCCTaGTTTTTGCGTAAACACTCTGTTTTGAGTGGATAT +
Preference number: 3 (lower is better)
Translates to: PGSGHPSSFDPS*FLRKHSVLSGY
Trigger: ATATCCACTCAAAACAGAGTGTTTACGCAAAAAGCAGGAGGGATCAAATGAACTAGGATGTCCGGAGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR-3UTR CAA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACAGGAAAATGTACCACTaGGTCCTCAGAAATAAACAT +
Preference number: 3 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNRKMYH*VLRNKH
Trigger: ATGTTTATTTCTGAGGACCAAGTGGTACATTTTCCT...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp GGAATCCAATGTAAAATTCTCATTCTTCCTAAGAGGTaGCCATTGTTCAGATGTGCCTCTCCTTGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: GIQCKILILPKR*PLFRCASPWAE
Trigger: TTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGAGAATTTTACATTGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp TATGTGTCAAAGGTCCAACCAAGGCCACTAGGCTTCTaGGACCTTTTCTCAGCTACTGATTTTAGTAATAGA +
Preference number: 3 (lower is better)
Translates to: YVSKVQPRPLGF*DLFSATDFSNR
Trigger: TCTATTACTAAAATCAGTAGCTGAGAAAAGGTCTCAGAAGCCTAGTGGCCTTGGTTGGACCTTTGACACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR TCA 72 bp TTGATCCCTCCTGCTTTTTGCGTAAACACTCTGTTTTaGGTGGATATGATACTGCATTGTGCTGTTAACACA +
Preference number: 3 (lower is better)
Translates to: LIPPAFCVNTLF*VDMILHCAVNT
Trigger: TGTGTTAACAGCACAATGCAGTATCATATCCACTCAAAACAGAGTGTTTACGCAAAAAGCAGGAGGGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCCCGAGTGGGCCTCTTaGTGGCCACGATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTPEWAS*WPRWGL
Trigger: GAGTCCCCATCGTGGCCAGCAAGAGGCCCACTCGGG...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTCTGGCCGCTCTGCTaGCCTCCTGCGCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTLWPLC*PPAPRY
Trigger: GTATCTGGGCGCAGGAGGCCAGCAGAGCGGCCAGAG...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACCCTGGTCTTGGCCTTaGGGAGGTCCACATGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPPWSWP*GGPHGP
Trigger: CGGCCCATGTGGACCTCCCCAAGGCCAAGACCAGGG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCCCAGGGCCCAGGCGCTaGCAGGCCACCGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCPGPRR*QATEVV
Trigger: CACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGG...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCATCTGGACTGAGAAGGTaGCTCAGCTGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPSGLRR*LSWPQG
Trigger: GCCCTGGGGCCAGCTGAGCCACCTTCTCAGTCCAGA...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCATCGACCCGGAGCAGTaGGCCCTGGCCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTIDPEQ*ALAFSF
Trigger: GAAGGAGAAGGCCAGGGCCCACTGCTCCGGGTCGAT...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACCCTGCCTGGGCTCCCTaGTCTGCCGTCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNPAWAP*SAVPRS
Trigger: GCTCCGGGGGACGGCAGACCAGGGAGCCCAGGCAGG...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCTGGGCTCCCTGGTCTaGCGTCCCCCGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKLGSLV*RPPEPG
Trigger: GCCAGGCTCCGGGGGACGGCAGACCAGGGAGCCCAG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCAGCAGCTCTTCTGCCATaGCCACAGCTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPAALLP*PQLRWP
Trigger: AGGCCACCTCAGCTGTGGCCATGGCAGAAGAGCTGC...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACCAGCCCTCGGTCTATaGTGGTCGTGTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPPALGL*WSCAHP
Trigger: AGGATGAGCACACGACCATCATAGACCGAGGGCTGG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCAAAGACCCTGCTGTCCTaGAGGGTGGCTATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPKTLLS*RVAMCG
Trigger: CCCACACATAGCCACCCTGCAGGACAGCAGGGTCTT...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCAACTTGACCCCCACGTaGCCAATGCCAACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTNLTPT*PMPTAS
Trigger: GCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTT...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCGCTGCTCCTATTTCGTaGCCCAGGGCCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCAAPIS*PRAQAL
Trigger: CAGCGCCTGGGCCCTGGGGCACGAAATAGGAGCAGC...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCTCTCGTCTGTGGCCTTaGACTCCACCAACTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTSRLWP*TPPTPR
Trigger: TCTCGGAGTTGGTGGAGTGCAAGGCCACAGACGAGA...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCGCAGTTCGCTGAGCTaGGTGCTGTCCTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKRSSLS*VLSWAR
Trigger: CCGCGCCCAGGACAGCACCCAGCTCAGCGAACTGCG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTTGCAGGCTCCTGCCTaGGCTCCCTGGTCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNLQAPA*APWSAV
Trigger: GACGGCAGACCAGGGAGCCCAGGCAGGAGCCTGCAA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTACTATGTCTCCCTGCTTaGCGGGCTGGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLLCLPA*RAGRAA
Trigger: GGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACATAG...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACTGATACAAATTGGGTaGGGACGCGCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPLIQIG*GRALWH
Trigger: ATGCCACAGTGCGCGTCCTCACCCAATTTGTATCAG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCATGTGCTTCCCTCCATTaGCCACCTCTTGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPCASLH*PPLASH
Trigger: ATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACA...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCATCTCGGCCCACGATGTaGAAGAGCACCTGTACTTTG +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPSRPTM*KSTCTL
Trigger: CAAAGTACAGGTGCTCTTCCACATCGTGGGCCGAGA...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCCCTGCTTGACGGGCTaGGAGGGCAGCCAGATGACC +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKPCLTG*EGSQMT
Trigger: GGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACCAAGGCGAGAGGGGTTaGGGGATGGACACGACAGCC +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNQGERG*GMDTTA
Trigger: GGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTG...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACCGGAGCAGTGGGCCCTaGCCTTCTCCTTCAGCTACC +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNRSSGP*PSPSAT
Trigger: GGTAGCTGAAGGAGAAGGCCAGGGCCCACTGCTCCG...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCTTTCTCCAGTCTGGCTaGAGTCAGCGTCATCCCATC +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTFLQSG*SQRHPI
Trigger: GATGGGATGACGCTGACTCCAGCCAGACTGGAGAAA...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGGCTCTGCTGGCCTCCTaGGCCCAGATACAACCGCTG +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKALLAS*AQIQPL
Trigger: CAGCGGTTGTATCTGGGCGCAGGAGGCCAGCAGAGC...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCATGCCTCACATCCCACTaGCGAGGCTCGCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSCLTSH*RGSLVC
Trigger: GCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCA...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTCCATTGCCCACCTCTTaGCTCACATCCCACTGCCGA +
Preference number: 4 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSPLPTS*LTSHCR
Trigger: TCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGG...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCCTCGTCCAAAGAGATaGCAGTCAAGGAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTPRPKR*QSRRSP
Trigger: AGGACTTCTCCTTGACTGCCATCTCTTTGGACGAGG...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGTCGTGTGCTCATCCTaGGGTGGGGACAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLVVCSS*GGDRSP
Trigger: TGGGGACCTGTCCCCACCCCAGGATGAGCACACGAC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCGCAGCTTTCCTCAGGTaGGATGGTGAATGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTAAFLR*DGECGK
Trigger: TTTGCCACATTCACCATCCCACCTGAGGAAAGCTGC...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAAGATGGGGTGTAGGGTaGCAGACAGCCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLRWGVG*QTAQPP
Trigger: TGGTGGCTGGGCTGTCTGTCACCCTACACCCCATCT...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGGTGGCATGCTGGAACTaGAGGGTACAACCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKVACWN*RVQPRP
Trigger: AGGCCGGGGTTGTACCCTGCAGTTCCAGCATGCCAC...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAGCCCAACCAAGACCCTaGTGTCCTGCAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSAQPRP*CPAGWL
Trigger: TAGCCACCCTGCAGGACAGCAGGGTCTTGGTTGGGC...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCACCCCCACGTGGCCAATaGCAACAGCCAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSPPRGQ*QQPAHS
Trigger: AGAGTGTGCTGGCTGTTGGCATTGGCCACGTGGGGG...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACAGAGCTCCGCCTCATTaGCCAGCCAGACCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNRAPPH*PARPSH
Trigger: ATGACTGGGTCTGGCTGGGCAATGAGGCGGAGCTCT...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCTCTGAGTTCCTTGGGTaGGCCCACGTCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCSEFLG*AHVQVL
Trigger: CAAGACCTGGACGTGGGCGCACCCAAGGAACTCAGA...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTGCTGTCCTGCAGGGTaGCTATGTGTGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNCCPAG*LCVGTP
Trigger: TGGAGTCCCCACACATAGCCACCCTGCAGGACAGCA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTAGCCCAGCCACCACCTaGACAGCTAAGTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSSPATT*TAKSVT
Trigger: TGTGACAGACTTAGCTGTCCAGGTGGTGGCTGGGCT...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAAGAGGGGTTGGGGGATaGACACGACAGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLRGVGG*TRQPRP
Trigger: TGGACGAGGCTGTCGTGTCCATCCCCCAACCCCTCT...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGGTGTGCCCCTGGTCTTaGCCTTGGGGAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKVCPWS*PWGGPH
Trigger: ATGTGGACCTCCCCAAGGCCAAGACCAGGGGCACAC...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTGGGTCATGGATGCCTaGCCTTCCAGAGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNWVMDA*PSRGTC
Trigger: ACAGGTGCCTCTGGAAGGCCAGGCATCCATGACCCA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGAACCTGGCTCTGCGTaGGCTTTTGGGAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLEPGSA*AFGSHR
Trigger: ACGGTGGCTCCCAAAAGCCCACGCAGAGCCAGGTTC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACAGGTACGGCGGCAATaGAGAGAATCTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: RGIPMPKLPETPTESLSPQVRRQ*RESLYI
Trigger: AATATACAGAGATTCTCTTCATTGCCGCCGTACCTG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCCACCGTCTTCCCTGTaGGGATGGCTGTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKPPSSL*GWLCSG
Trigger: TCCTGAACACAGCCATCCTCACAGGGAAGACGGTGG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCATGCCATGGCCACAGCTaGGGTGGCCTTGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSCHGHS*GGLVVL
Trigger: GAGAACAACAAGGCCACCTCAGCTGTGGCCATGGCA...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGAGAGTGGGTCATGGATaGCTGGCCTTCCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKRVGHG*LAFQRH
Trigger: GTGCCTCTGGAAGGCCAGGCATCCATGACCCACTCT...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTACGCACTGTGGCATGCTaGAACTGCAGGGTACAACCC +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLRTVAC*NCRVQP
Trigger: GGGTTGTACCCTGCAGTTCCAGCATGCCACAGTGCG...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCGAGCCATCACTGAACTaGAGCCATGTGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTEPSLN*SHVLII
Trigger: TATAATCAGCACATGGCTCCAGTTCAGTGATGGCTC...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAGCTGGGCCTTGTAGATaGAGAAAGACTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSAGPCR*RKTPPW
Trigger: CCAGGGTGGAGTCTTTCTTCATCTACAAGGCCCAGC...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCGGGCCGGGAAATTGGTaGAGTCAATGGGTATGCTGT +
Preference number: 4 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCGPGNW*SQWVCC
Trigger: ACAGCATACCCATTGACTTCACCAATTTCCCGGCCC...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCATGGGCTGTCTGCATaGGACCATTCTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKHGLSA*DHSPPV
Trigger: CACTGGAGGAGAATGGTCTCATGCAGACAGCCCATG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTATCATCTTCCCCACTaGGGATGGAGTTCACCGTGG +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNYHLPH*GWSSPW
Trigger: CCACGGTGAACTCCATCCTCAGTGGGGAAGATGATA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCCCTCTGGCCGCTCTaGTGGCCTCCTGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDPLWPL*WPPAPR
Trigger: TCTGGGCGCAGGAGGCCAGCAGAGCGGCCAGAGGGG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGGCGATGGTGACAGATaGGGTGACTATGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLGDGDR*GDYVSL
Trigger: CAGGGAGACATAGTCACCGCATCTGTCACCATCGCC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACACCACGCTCGTCCCCTaGCTGTACAGCATAATACAG +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNTTLVP*LYSIIQ
Trigger: CTGTATTATGCTGTACAGCCAGGGGACGAGCGTGGT...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTCCTTTTCTCCAGTCTaGCTGGAGTCAGCGTCATCC +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNSFSPV*LESASS
Trigger: GGATGACGCTGACTCCAGCCAGACTGGAGAAAAGGA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCAGGCGCAGTTCGCTaGGCTGGGTGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDPGAVR*AGCCPG
Trigger: CCCAGGACAGCACCCAGCTCAGCGAACTGCGCCTGG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGTTTGTGCCTGTACTTaGAGGCAAAGGTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLVCACT*RQRWRS
Trigger: ACTGCGCCACCTTTGCCTTCAAGTACAGGCACAAAC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACTGGGTGATGTCAAACTaGCAGTCTGGACTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNWVMSN*QSGLRR
Trigger: CCTTCTCAGTCCAGACTGGCAGTTTGACATCACCCA...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGCAGCCAGCACACTCTTaGGCTTGGATTTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKQPAHS*AWISDR
Trigger: CCTGTCAGAAATCCAAGCGCAAGAGTGTGCTGGCTG...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCACCGGACTCCCCTCTaGCCGCTCTGCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDHRTPL*PLCWPP
Trigger: AGGAGGCCAGCAGAGCGGCCAGAGGGGAGTCCGGTG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCACTCCAGCCCTTAACCTaGCTGAGTTCTGTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSLQPLT*LSSVSE
Trigger: CTCTGACACAGAACTCAGCCAGGTTAAGGGCTGGAG...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTTCAAGGAGAAGTCCTTaGAGTCGTAGATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSSRRSP*SRRYPG
Trigger: CCCTGGATATCTACGACTCCAAGGACTTCTCCTTGA...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTCCAGGAAAGTTGCCATaGTATAGTTCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSPGKLP*YSSSWP
Trigger: AGGCCAGGATGAACTATACCATGGCAACTTTCCTGG...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
3UTR CAA 72 bp GGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTaGGCCATACCCTATTCAGATAGCTGTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: GVARCHRLHSVL*AIPYSDSCEHY
Trigger: ATAATGTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTACCCACGTCCAGGTCTTaGCAAACCCACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLPTSRS*QTHLIS
Trigger: TGATATCAAGTGGGTTTGTCAAGACCTGGACGTGGG...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCAGGGATGACCTTTTCTaGAGAGTAAGGCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCRDDLF*RVRPIA
Trigger: AGCTATGGGCCTTACTCTGCAGAAAAGGTCATCCCT...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACAGAGGCACCTGTTTGTaGCTGTACTTGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNRGTCL*LYLKAK
Trigger: CTTTGCCTTCAAGTACAGGCACAAACAGGTGCCTCT...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATGGCAGCATCTCCAGCTaGGCCACGCACAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDGSISS*ATHSPR
Trigger: CCTGGGACTGTGCGTGGCCCAGCTGGAGATGCTGCC...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTACAGGGTGGCTATGTGTaGGGACTCCAGCTTCATAAA +
Preference number: 4 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLQGGYV*GLQLHK
Trigger: TTTATGAAGCTGGAGTCCCCACACATAGCCACCCTG...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTTTGGGCCTAAAAAGTTaGGGTTCAACATCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSLGLKS*GSTSSP
Trigger: TGGACTTGATGTTGAACCCCAACTTTTTAGGCCCAA...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATACTGCCAGTCTGGACTaGGAAGGTGGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDTASLD*EGGSAG
Trigger: GCCAGCTGAGCCACCTTCTCAGTCCAGACTGGCAGT...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATAGCCAGACCCAGTCATaGGAGTGGGTCATGGATGCC +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDSQTQS*EWVMDA
Trigger: GGCATCCATGACCCACTCTCATGACTGGGTCTGGCT...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCACAAAGGGAAACTTACTaGTTGGGCCTAAAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSQRETY*LGLKSW
Trigger: CCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTG...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATGTGCTCATCCTGGGGTaGGGACAGGTCCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDVLILG*GQVPNV
Trigger: AACATTGGGGACCTGTCCCCACCCCAGGATGAGCAC...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATGGATGGAGTTCACCGTaGGGCAGCTTTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDGWSSP*GSFPQV
Trigger: CACCTGAGGAAAGCTGCCCCACGGTGAACTCCATCC...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR GCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCTCGGGTACTCCACCTaGCATGTGATAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDLGYST*HVIGCV
Trigger: GACACAGCCTATCACATGGCAGGTGGAGTACCCGAG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATAGGTCACTCAGGCCATaGGCTGTCTGCATGAGACCA +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDRSLRP*AVCMRP
Trigger: TGGTCTCATGCAGACAGCCCATGGCCTGAGTGACCT...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCATGAGAGTGGGTCATaGATGCCTGGCCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDHESGS*MPGLPE
Trigger: CTCTGGAAGGCCAGGCATCCATGACCCACTCTCATG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATTCCCCGAGAGGCTGCTaGAGCTGGCGATTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDSPRGC*SWRFQN
Trigger: ATTTTGAAATCGCCAGCTTCAGCAGCCTCTCGGGGA...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATTCAGGTGCTGGTAGGTaGAGTTCACCACAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDSGAGR*SSPQSP
Trigger: TGGACTCTGTGGTGAACTTCACCTACCAGCACCTGA...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCCTCTGATACAAATTaGGTGAGGACGCGCACTGTG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDPSDTN*VRTRTV
Trigger: CACAGTGCGCGTCCTCACCCAATTTGTATCAGAGGG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATGCAACTAGGTCCTTCTaGCTGATGAAGATCTCCGAC +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDATRSF*LMKISD
Trigger: GTCGGAGATCTTCATCAGCCAGAAGGACCTAGTTGC...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATTCAAGTCCAGAGGGATaGCCTTTTCTGCAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDSSPEG*PFLQSK
Trigger: CTTACTCTGCAGAAAAGGTCATCCCTCTGGACTTGA...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR TCA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCACTGGCATGGTTCTTaGTCTCCTCCTCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDHWHGS*SPPHPF
Trigger: AAAAGGATGAGGAGGAGATCAAGAACCATGCCAGTG...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp CGTGCCCCAGGGCCCAGGCGCTGGCAGGCCACCGAGGTGGTGGTGTaGTTCCCTCCATTGCCCACCTCTTGCCTCACATCCCACTGCCGA +
Preference number: 5 (lower is better)
Translates to: RAPGPRRWQATEVVV*FPPLPTSCLTSHCR
Trigger: TCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp CGACCCGGAGCAGTGGGCCCTGGCCTTCTCCTTCAGCTACCACGGTaGGCCACCAAGGCGAGAGGGGTTGGGGGATGGACACGACAGCCT +
Preference number: 5 (lower is better)
Translates to: RPGAVGPGLLLQLPR*ATKARGVGGWTRQP
Trigger: AGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGCCAGGGCCCACTGCTCCGGGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp CCAGGCGCTGGCAGGCCACCGAGGTGGTGGTGTGCTTCCCTCCATTaGCCACCTCTTGCCTCACATCCCACTGCCGAGGCTCGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: PGAGRPPRWWCASLH*PPLASHPTAEARWS
Trigger: AGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TCCTATTTCGTGCCCCAGGGCCCAGGCGCTGGCAGGCCACCGAGGTaGTGGTGTGCTTCCCTCCATTGCCCACCTCTTGCCTCACATCCC +
Preference number: 5 (lower is better)
Translates to: SYFVPQGPGAGRPPR*WCASLHCPPLASHP
Trigger: GGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGGCACGAAATAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp GTCCCCTGGCTGTACAGCATAATACAGTTCCACCGGACTCCCCTCTaGCCGCTCTGCTGGCCTCCTGCGCCCAGATACAACCGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VPWLYSIIQFHRTPL*PLCWPPAPRYNRWG
Trigger: CCCCCAGCGGTTGTATCTGGGCGCAGGAGGCCAGCAGAGCGGCCAGAGGGGAGTCCGGTGGAACTGTATTATGCTGTACAGCCAGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TATTTCGTGCCCCAGGGCCCAGGCGCTGGCAGGCCACCGAGGTGGTaGTGTGCTTCCCTCCATTGCCCACCTCTTGCCTCACATCCCACT +
Preference number: 5 (lower is better)
Translates to: YFVPQGPGAGRPPRW*CASLHCPPLASHPT
Trigger: AGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGGCACGAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp TCCGACACAGCAATGTCCGTGGCCCCCTTCCTCGGGTACTCCACCTaGCATGTGATAGGCTGTGTCCCCGAGAGGCTGCTGAAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SDTAMSVAPFLGYST*HVIGCVPERLLKLA
Trigger: CGCCAGCTTCAGCAGCCTCTCGGGGACACAGCCTATCACATGGCAGGTGGAGTACCCGAGGAAGGGGGCCACGGACATTGCTGTGTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp GTGGTGTGCTTCCCTCCATTGCCCACCTCTTGCCTCACATCCCACTaGCGAGGCTCGCTGGTCTGCACGGTCAGGATGTTCACCCCCTTC +
Preference number: 5 (lower is better)
Translates to: VVCFPPLPTSCLTSH*RGSLVCTVRMFTPF
Trigger: GAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp CTGAATAAATTGCTGCTCCTATTTCGTGCCCCAGGGCCCAGGCGCTaGCAGGCCACCGAGGTGGTGGTGTGCTTCCCTCCATTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LNKLLLLFRAPGPRR*QATEVVVCFPPLPT
Trigger: GGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGGCACGAAATAGGAGCAGCAATTTATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp GCGGGTCGGGGTTGGCCTCCTTTAGGAAGAATGCAGTCTCGGCTCTaGGGACGTGGAAGCTCACGGGCAGGTACGGCGGCAATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: AGRGWPPLGRMQSRL*GRGSSRAGTAAMKR
Trigger: TCTCTTCATTGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTCAGAGCCGAGACTGCATTCTTCCTAAAGGAGGCCAACCCCGACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp GCGATGGTGACAGATGCGGTGACTATGTCTCCCTGCTTGACGGGCTaGGAGGGCAGCCAGATGACCACATTGCCATCCAGGCGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: AMVTDAVTMSPCLTG*EGSQMTTLPSRRSS
Trigger: CGAACTGCGCCTGGATGGCAATGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACATAGTCACCGCATCTGTCACCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp CTCCATTGCCCACCTCTTGCCTCACATCCCACTGCCGAGGCTCGCTaGTCTGCACGGTCAGGATGTTCACCCCCTTCTTCACCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LHCPPLASHPTAEAR*SARSGCSPPSSPWL
Trigger: GAGCCAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp CCTTCTCCTTCAGCTACCACGGTGGGCCACCAAGGCGAGAGGGGTTaGGGGATGGACACGACAGCCTCGTCCAAAGAGATGGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: PSPSATTVGHQGERG*GMDTTASSKEMAVK
Trigger: CTTGACTGCCATCTCTTTGGACGAGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp GGATTTCTGACAGGCTTCGGCAATGGACATATCGACCCGGAGCAGTaGGCCCTGGCCTTCTCCTTCAGCTACCACGGTGGGCCACCAAGG +
Preference number: 5 (lower is better)
Translates to: GFLTGFGNGHIDPEQ*ALAFSFSYHGGPPR
Trigger: CCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGCCAGGGCCCACTGCTCCGGGTCGATATGTCCATTGCCGAAGCCTGTCAGAAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACCAAGGCGAGAGGGGTaGGGGGATGGACACGACAGC +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPPRREG*GDGHDS
Trigger: GCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp TTGCCCACCTCTTGCCTCACATCCCACTGCCGAGGCTCGCTGGTCTaGACGGTCAGGATGTTCACCCCCTTCTTCACCTTGGCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: LPTSCLTSHCRGSLV*TVRMFTPFFTLALR
Trigger: CCTAAGAGCCAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp GAGAATCTCTGTATATTATCCATGACCCCTCGGCTTTCGGTCACTTaGCCCAGTAGCGTGGCTAGGACCAGGCTCAGCGCCCCGTACCGC +
Preference number: 5 (lower is better)
Translates to: ENLCILSMTPRLSVT*PSSVARTRLSAPYR
Trigger: GCGGTACGGGGCGCTGAGCCTGGTCCTAGCCACGCTACTGGGCCAAGTGACCGAAAGCCGAGGGGTCATGGATAATATACAGAGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TCTCTGAACGCAAAGACCCGCAGGCAGGGCAGTTTCTCGTCCCTGTaGTCATCCCAGTCTCGGCCCACGATGTGGAAGAGCACCTGTACT +
Preference number: 5 (lower is better)
Translates to: SLNAKTRRQGSFSSL*SSQSRPTMWKSTCT
Trigger: AGTACAGGTGCTCTTCCACATCGTGGGCCGAGACTGGGATGACCACAGGGACGAGAAACTGCCCTGCCTGCGGGTCTTTGCGTTCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TTCCCGCCCAACCAAGACCCTGCTGTCCTGCAGGGTGGCTATGTGTaGGGACTCCAGCTTCATAAAGTCAGCCACCAGGTGGGTGATGTC +
Preference number: 5 (lower is better)
Translates to: FPPNQDPAVLQGGYV*GLQLHKVSHQVGDV
Trigger: GACATCACCCACCTGGTGGCTGACTTTATGAAGCTGGAGTCCCCACACATAGCCACCCTGCAGGACAGCAGGGTCTTGGTTGGGCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TCTTCTCGGCCAAGATGGAGTCGGACAGGGGAGACAACACCTGGATaGTGGTCATTCCGACTTCCCGCCCAACCAAGACCCTGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SSRPRWSRTGETTPG*WSFRLPAQPRPCCP
Trigger: AGGACAGCAGGGTCTTGGTTGGGCGGGAAGTCGGAATGACCACCATCCAGGTGTTGTCTCCCCTGTCCGACTCCATCTTGGCCGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CCA 90 bp ACTGTCTTCTCGGCCAAGATGGAGTCGGACAGGGGAGACAACACCTaGATGGTGGTCATTCCGACTTCCCGCCCAACCAAGACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: TVFSAKMESDRGDNT*MVVIPTSRPTKTLL
Trigger: CAGCAGGGTCTTGGTTGGGCGGGAAGTCGGAATGACCACCATCCAGGTGTTGTCTCCCCTGTCCGACTCCATCTTGGCCGAGAAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCAGCTCTGCGTGGGCTTTaGGGAGCCACCGTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPALRGL*GATVEK
Trigger: CTTCTCAACGGTGGCTCCCAAAAGCCCACGCAGAGC...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp CCACAGCTGAGGTGGCCTTGTTGTTCTCTGAGATGGGGTGTAGGGTaGCAGACAGCCCAGCCACCACCTGGACAGCTAAGTCTGTCACAG +
Preference number: 5 (lower is better)
Translates to: PQLRWPCCSLRWGVG*QTAQPPPGQLSLSQ
Trigger: CTGTGACAGACTTAGCTGTCCAGGTGGTGGCTGGGCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS TCA 90 bp CCTTTTCTCCAGTCTGGCTGGAGTCAGCGTCATCCCATCCAAACTTaGCCCCCACGTGGCCAATGCCAACAGCCAGCACACTCTTGCGCT +
Preference number: 5 (lower is better)
Translates to: PFLQSGWSQRHPIQT*PPRGQCQQPAHSCA
Trigger: AGCGCAAGAGTGTGCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGGAGAAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCAGCCAGATGACCACATaGCCATCCAGGCGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTSQMTT*PSRRSS
Trigger: CGAACTGCGCCTGGATGGCAATGTGGTCATCTGGCT...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTTCCCGAGTGGGCCTCTaGCTGGCCACGATGGGGACT +
Preference number: 5 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSSRVGL*LATMGT
Trigger: AGTCCCCATCGTGGCCAGCAAGAGGCCCACTCGGGA...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 90 bp GTAGAGTTATTGGCGATGGTGACAGATGCGGTGACTATGTCTCCCTaGTTGACGGGCTGGGAGGGCAGCCAGATGACCACATTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VELLAMVTDAVTMSP*LTGWEGSQMTTLPS
Trigger: GGATGGCAATGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACATAGTCACCGCATCTGTCACCATCGCCAATAACTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTACCCCTGGTCTTGGCCTaGGGGAGGTCCACATGGGCC +
Preference number: 5 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLPLVLA*GRSTWA
Trigger: GGCCCATGTGGACCTCCCCAAGGCCAAGACCAGGGG...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp CGGGCAGGTACGGCGGCAATGAAGAGAATCTCTGTATATTATCCATaGCCCCTCGGCTTTCGGTCACTTGGCCCAGTAGCGTGGCTAGGA +
Preference number: 5 (lower is better)
Translates to: RAGTAAMKRISVYYP*PLGFRSLGPVAWLG
Trigger: TCCTAGCCACGCTACTGGGCCAAGTGACCGAAAGCCGAGGGGTCATGGATAATATACAGAGATTCTCTTCATTGCCGCCGTACCTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp CTCGGCTCTGAGGACGTGGAAGCTCACGGGCAGGTACGGCGGCAATaGAGAGAATCTCTGTATATTATCCATGACCCCTCGGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: LGSEDVEAHGQVRRQ*RESLYIIHDPSAFG
Trigger: ACCGAAAGCCGAGGGGTCATGGATAATATACAGAGATTCTCTTCATTGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTCAGAGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp AGTTCAGTGTCCATAGCAAGGGGGACGATGGCAACTAGGTCCTTCTaGCTGATGAAGATCTCCGACACAGCAATGTCCGTGGCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSVSIARGTMATRSF*LMKISDTAMSVAPF
Trigger: GAAGGGGGCCACGGACATTGCTGTGTCGGAGATCTTCATCAGCCAGAAGGACCTAGTTGCCATCGTCCCCCTTGCTATGGACACTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCACCTGGACGAATAGCATaGTCCTTCCTGGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPPGRIA*SFLVSP
Trigger: AGGTGACACCAGGAAGGACAATGCTATTCGTCCAGG...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCTGTTTGTGCCTGTACTaGAAGGCAAAGGTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTCLCLY*KAKVAQ
Trigger: CTGCGCCACCTTTGCCTTCAAGTACAGGCACAAACA...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCAGCCCACGTCCAGGTCTaGACAAACCCACTTGATATC +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPAHVQV*TNPLDI
Trigger: GATATCAAGTGGGTTTGTCAAGACCTGGACGTGGGC...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp GTTCCAGGTCCTGAATCTTCTGCCGACGGTCACTGGCATGGTTCTTaGTCTCCTCCTCATCCTTTTCTCCAGTCTGGCTGGAGTCAGCGT +
Preference number: 5 (lower is better)
Translates to: VPGPESSADGHWHGS*SPPHPFLQSGWSQR
Trigger: ACGCTGACTCCAGCCAGACTGGAGAAAAGGATGAGGAGGAGATCAAGAACCATGCCAGTGACCGTCGGCAGAAGATTCAGGACCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 90 bp AAGTTGCCATGGTATAGTTCATCCTGGCCTGGGCGTTCCAGGTCCTaGATCTTCTGCCGACGGTCACTGGCATGGTTCTTGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KLPWYSSSWPGRSRS*IFCRRSLAWFLISS
Trigger: GGAGGAGATCAAGAACCATGCCAGTGACCGTCGGCAGAAGATTCAGGACCTGGAACGCCCAGGCCAGGATGAACTATACCATGGCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp TCACTGGCATGGTTCTTGATCTCCTCCTCATCCTTTTCTCCAGTCTaGCTGGAGTCAGCGTCATCCCATCCAAACTTGACCCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SLAWFLISSSSFSPV*LESASSHPNLTPTW
Trigger: CCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGGAGAAAAGGATGAGGAGGAGATCAAGAACCATGCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp GTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCTATTCAGATAGCTGTGAACCGCAGCGGGTCGGGGTaGGCCTCCTTTAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: VTGCTLFSWPYPIQIAVNRSGSG*ASFRKN
Trigger: ATTCTTCCTAAAGGAGGCCAACCCCGACCCGCTGCG...GTTCACAGCTATCTGAATAGGGTATGGCCAAGAGAACAGAGTGCAGCCTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCATCCACAGTAGAGTTATaGGCGATGGTGACAGATGCG +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPSTVEL*AMVTDA
Trigger: CGCATCTGTCACCATCGCCAATAACTCTACTGTGGA...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGTGGAGGTGGGTGAGTTaGCAGGCTCCTGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKWRWVS*QAPAWA
Trigger: AGCCCAGGCAGGAGCCTGCAAACTCACCCACCTCCA...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCAGTTGGGCCTAAAAAGTaGGGGTTCAACATCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPVGPKK*GFNIKS
Trigger: GGACTTGATGTTGAACCCCAACTTTTTAGGCCCAAC...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCCATAGGGAGTGGCCAGGTGTCACAGGCTGCACTCTGTTCTCTTGGCCATACCCAGGTAGACTTTCTCTaGAAGGATGTAGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SIGSGQVSQAALCSLGHTQVDFL*KDVGLQ
Trigger: CTGAAGGCCTACATCCTTCAAGAGAAAGTCTACCTG...GGTATGGCCAAGAGAACAGAGTGCAGCCTGTGACACCTGGCCACTCCCTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATCCACTCTGCCTCGCTGCGTGTGCTTCCCTCCATaGCCCACCTCTTGCCTCACA +
Preference number: 5 (lower is better)
Translates to: NNSLMSEQFSFGSTLPRCVCFPP*PTSCLT
Trigger: TGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACAC...GCAGCGAGGCAGAGTGGATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTCCACTCTTCCCCACGTaGTTATCCAGCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSPLFPT*LSSRDL
Trigger: CAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGG...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp AGAGGCATCCCTATGCCCAAACTGCCGGAGACACCCACTGAGTCTCTGTCTCCATTTTGGGAGCCACCGTaGAGAAGTAAGTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RGIPMPKLPETPTESLSPFWEPP*RSKWLF
Trigger: GAACAACCACTTACTTCTCAACGGTGGCTCCCAAAA...TGGAGACAGAGACTCAGTGGGTGTCTCCGGCAGTTTGGGCATAGGGATGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCATTCTCGTCTGTGGCCTaGCACTCCACCAACTCCGAG +
Preference number: 5 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSFSSVA*HSTNSE
Trigger: CTCGGAGTTGGTGGAGTGCAAGGCCACAGACGAGAA...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTTCCAGAGGCACCTGTTaGTGCCTGTACTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSSRGTC*CLYLKA
Trigger: TGCCTTCAAGTACAGGCACAAACAGGTGCCTCTGGA...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp GTCAGGATGTTCACCCCCTTCTTCACCTTGGCTCTTAGGATGAAATaGTCCACAGTAGAGTTATTGGCGATGGTGACAGATGCGGTGACT +
Preference number: 5 (lower is better)
Translates to: VRMFTPFFTLALRMK*STVELLAMVTDAVT
Trigger: AGTCACCGCATCTGTCACCATCGCCAATAACTCTACTGTGGACCATTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGTGAACATCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCATTATCCAGCAGGGACTaGGTAGTGGTGGTAGCACTC +
Preference number: 5 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSLSSRD*VVVVAL
Trigger: GAGTGCTACCACCACTACCAAGTCCCTGCTGGATAA...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 90 bp CTTGAAGGATGTAGGCCTTCAGCCTCCAGTCAAAGGGAAACTTACTaGTTGGGCCTAAAAAGTTGGGGTTCAACATCAAGTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: LEGCRPSASSQRETY*LGLKSWGSTSSPEG
Trigger: TCCCTCTGGACTTGATGTTGAACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTGACTGGAGGCTGAAGGCCTACATCCTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAACCCCCTTCTTCACCTaGGCTCTTAGGATGAAATGG +
Preference number: 5 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLTPFFT*ALRMKW
Trigger: CCATTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGT...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CATCTGCCTGACTCTGCACACCTCGAGTTTATGGATTTCACTCACAGCTCTTCAACATGGGCCGGGAAATaGGTGAAGTCAATGGGTATG +
Preference number: 5 (lower is better)
Translates to: HLPDSAHLEFMDFTHSSSTWAGK*VKSMGM
Trigger: CATACCCATTGACTTCACCAATTTCCCGGCCCATGT...TGAAGAGCTGTGAGTGAAATCCATAAACTCGAGGTGTGCAGAGTCAGGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCATTCTTCCTAAGAGGTGACCATTGTTCAGATGTGCCTCTCCTTGGGCAGAAGAGGGAAACTTACTGGTaGGGCCTAAAAAGTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SFFLRGDHCSDVPLLGQKRETYW*GLKSWG
Trigger: ACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCT...CTTCTGCCCAAGGAGAGGCACATCTGAACAATGGTCACCTCTTAGGAAGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAACCTCGCTGAATAAATaGCTGCTCCTATTTCGTGCC +
Preference number: 5 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLTSLNK*LLLFRA
Trigger: GGCACGAAATAGGAGCAGCAATTTATTCAGCGAGGT...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp CAGCTTCTAACCTGCTACCTGGTATTCTGTGGGCCCCAGATTTCCTCACTCAGTTCTGTCACAGATACTTaGTCATCCAGCACAGTTACT +
Preference number: 5 (lower is better)
Translates to: QLLTCYLVFCGPQISSLSSVTDT*SSSTVT
Trigger: AGTAACTGTGCTGGATGACAAAGTATCTGTGACAGA...ACTGAGTGAGGAAATCTGGGGCCCACAGAATACCAGGTAGCAGGTTAGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATTCCATTGCCCACCTCTaGCCTCACATCCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDSIAHL*PHIPLP
Trigger: CGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGA...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGAGTCCATCTTGCCCTaGATCTCTTTACCATTGACA +
Preference number: 5 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLESILP*ISLPLT
Trigger: TGTCAATGGTAAAGAGATCAAGGGCAAGATGGACTC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TCGCTGCTGAGTCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTAGTGAATGTGGCAAACTaGACCTTCTTCATCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLLSQRLKLLETYHPLLLVNVAN*TFFILE
Trigger: CTCCAAGATGAAGAAGGTCAAGTTTGCCACATTCAC...TAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGACTCAGCAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS-3UTR CAA 90 bp TGTCGTTTGATTCATAAAATAACTCTCTCATGTCTGAGCAGTTCTCTTTCGGATGCTGAGGTGGCCTTGTaGTTCTCTGAGATGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CRLIHKITLSCLSSSLSDAEVAL*FSEMGC
Trigger: ACACCCCATCTCAGAGAACAACAAGGCCACCTCAGC...ATCCGAAAGAGAACTGCTCAGACATGAGAGAGTTATTTTATGAATCAAACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp GTGCCCCAGGGCCCAGGCGCTGGCAGGCCACCGAGGTaGTGGTGTGCTTCCCTCCATTGCCCACCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: VPQGPGAGRPPR*WCASLHCPPLA
Trigger: GGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp CCCCAGGGCCCAGGCGCTGGCAGGCCACCGAGGTGGTaGTGTGCTTCCCTCCATTGCCCACCTCTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: PQGPGAGRPPRW*CASLHCPPLAS
Trigger: TGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCCAGCGCCTGGGCCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp CTGGCCTCCTGCGCCCAGATACAACCGCTGGGGGACTaGACCAGCCAGGCAGCATCTCCAGCTGGGCCACGC +
Preference number: 6 (lower is better)
Translates to: LASCAQIQPLGD*TSQAASPAGPR
Trigger: GCGTGGCCCAGCTGGAGATGCTGCCTGGCTGGTTCAGTCCCCCAGCGGTTGTATCTGGGCGCAGGAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp GCAGTGGGCCCTGGCCTTCTCCTTCAGCTACCACGGTaGGCCACCAAGGCGAGAGGGGTTGGGGGATGGACA +
Preference number: 6 (lower is better)
Translates to: AVGPGLLLQLPR*ATKARGVGGWT
Trigger: TGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGCCAGGGCCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp GGCAGGCCACCGAGGTGGTGGTGTGCTTCCCTCCATTaGCCACCTCTTGCCTCACATCCCACTGCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: GRPPRWWCASLH*PPLASHPTAEA
Trigger: AGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAAGCACACCACCACCTCGGTGGCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp ATGTCTCCCTGCTTGACGGGCTGGGAGGGCAGCCAGATGACCACATaGCCATCCAGGCGCAGTTCGCTGAGCTGGGTGCTGTCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: MSPCLTGWEGSQMTT*PSRRSSLSWVLSWA
Trigger: CGCCCAGGACAGCACCCAGCTCAGCGAACTGCGCCTGGATGGCAATGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp GCAATGTCCGTGGCCCCCTTCCTCGGGTACTCCACCTaGCATGTGATAGGCTGTGTCCCCGAGAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: AMSVAPFLGYST*HVIGCVPERLL
Trigger: CAGCAGCCTCTCGGGGACACAGCCTATCACATGGCAGGTGGAGTACCCGAGGAAGGGGGCCACGGACATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp TGCTTGACGGGCTGGGAGGGCAGCCAGATGACCACATaGCCATCCAGGCGCAGTTCGCTGAGCTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CLTGWEGSQMTT*PSRRSSLSWVL
Trigger: CAGCACCCAGCTCAGCGAACTGCGCCTGGATGGCAATGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp GCAAAGACCCGCAGGCAGGGCAGTTTCTCGTCCCTGTaGTCATCCCAGTCTCGGCCCACGATGTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: AKTRRQGSFSSL*SSQSRPTMWKS
Trigger: GCTCTTCCACATCGTGGGCCGAGACTGGGATGACCACAGGGACGAGAAACTGCCCTGCCTGCGGGTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp AGCTGGCCCCAGGGCCCAGCACCCTCTGATACAAATTaGGTGAGGACGCGCACTGTGGCATGCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: SWPQGPAPSDTN*VRTRTVACWNC
Trigger: GCAGTTCCAGCATGCCACAGTGCGCGTCCTCACCCAATTTGTATCAGAGGGTGCTGGGCCCTGGGGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TCAGCTACCACGGTGGGCCACCAAGGCGAGAGGGGTTaGGGGATGGACACGACAGCCTCGTCCAAAGAGATG +
Preference number: 6 (lower is better)
Translates to: SATTVGHQGERG*GMDTTASSKEM
Trigger: CATCTCTTTGGACGAGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TCGGCAATGGACATATCGACCCGGAGCAGTGGGCCCTaGCCTTCTCCTTCAGCTACCACGGTGGGCCACCAA +
Preference number: 6 (lower is better)
Translates to: SAMDISTRSSGP*PSPSATTVGHQ
Trigger: TTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGCCAGGGCCCACTGCTCCGGGTCGATATGTCCATTGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp ACAGGCTTCGGCAATGGACATATCGACCCGGAGCAGTaGGCCCTGGCCTTCTCCTTCAGCTACCACGGTGGG +
Preference number: 6 (lower is better)
Translates to: TGFGNGHIDPEQ*ALAFSFSYHGG
Trigger: CCCACCGTGGTAGCTGAAGGAGAAGGCCAGGGCCCACTGCTCCGGGTCGATATGTCCATTGCCGAAGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp GGGGCACGTAGCAGCTCTTCTGCCATGGCCACAGCTGAGGTGGCCTaGTTGTTCTCTGAGATGGGGTGTAGGGTGACAGACAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GARSSSSAMATAEVA*LFSEMGCRVTDSPA
Trigger: GGCTGGGCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCTGTGGCCATGGCAGAAGAGCTGCTACGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CAA 90 bp GCCTTCTCCTTCAGCTACCACGGTGGGCCACCAAGGCGAGAGGGGTaGGGGGATGGACACGACAGCCTCGTCCAAAGAGATGGCAGTCAA +
Preference number: 6 (lower is better)
Translates to: AFSFSYHGGPPRREG*GDGHDSLVQRDGSQ
Trigger: TTGACTGCCATCTCTTTGGACGAGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAAGGAGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp GGTTGGCCTCCTTTAGGAAGAATGCAGTCTCGGCTCTaGGGACGTGGAAGCTCACGGGCAGGTACGGCGGCA +
Preference number: 6 (lower is better)
Translates to: GWPPLGRMQSRL*GRGSSRAGTAA
Trigger: TGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTCAGAGCCGAGACTGCATTCTTCCTAAAGGAGGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp TTCCCTCCATTGCCCACCTCTTGCCTCACATCCCACTaGCGAGGCTCGCTGGTCTGCACGGTCAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: FPPLPTSCLTSH*RGSLVCTVRMF
Trigger: GAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGGGCAATGGAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp TGGTGGTCATTCCGACTTCCCGCCCAACCAAGACCCTaGTGTCCTGCAGGGTGGCTATGTGTGGGGACTCCA +
Preference number: 6 (lower is better)
Translates to: WWSFRLPAQPRP*CPAGWLCVGTP
Trigger: TGGAGTCCCCACACATAGCCACCCTGCAGGACAGCAGGGTCTTGGTTGGGCGGGAAGTCGGAATGACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CCA 72 bp CCACCTCTTGCCTCACATCCCACTGCCGAGGCTCGCTaGTCTGCACGGTCAGGATGTTCACCCCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PPLASHPTAEAR*SARSGCSPPSS
Trigger: TGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp CCCTCGGTCTATGATGGTCGTGTGCTCATCCTGGGGTaGGGACAGGTCCCCAATGTTCTCCAAGAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: PSVYDGRVLILG*GQVPNVLQELR
Trigger: GCGGAGCTCTTGGAGAACATTGGGGACCTGTCCCCACCCCAGGATGAGCACACGACCATCATAGACCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp CCCAGCCCTCGGTCTATGATGGTCGTGTGCTCATCCTaGGGTGGGGACAGGTCCCCAATGTTCTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: PSPRSMMVVCSS*GGDRSPMFSKS
Trigger: GCTCTTGGAGAACATTGGGGACCTGTCCCCACCCCAGGATGAGCACACGACCATCATAGACCGAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp TTCAGCTACCACGGTGGGCCACCAAGGCGAGAGGGGTaGGGGGATGGACACGACAGCCTCGTCCAAAGAGAT +
Preference number: 6 (lower is better)
Translates to: FSYHGGPPRREG*GDGHDSLVQRD
Trigger: ATCTCTTTGGACGAGGCTGTCGTGTCCATCCCCCAACCCCTCTCGCCTTGGTGGCCCACCGTGGTAGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp AGCCTAGCCCCGTCCCGCCTGCCACTCTTCCCCACGTaGTTATCCAGCAGGGACTTGGTAGTGGTGGTAGCA +
Preference number: 6 (lower is better)
Translates to: SLAPSRLPLFPT*LSSRDLVVVVA
Trigger: TGCTACCACCACTACCAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGGCAGGCGGGACGGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp GCACGTAGCAGCTCTTCTGCCATGGCCACAGCTGAGGTGGCCTTGTaGTTCTCTGAGATGGGGTGTAGGGTGACAGACAGCCCAGCCACC +
Preference number: 6 (lower is better)
Translates to: ARSSSSAMATAEVAL*FSEMGCRVTDSPAT
Trigger: GGTGGCTGGGCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCTGTGGCCATGGCAGAAGAGCTGCTACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CAA 90 bp CCGTCCCGCCTGCCACTCTTCCCCACGTTGTTATCCAGCAGGGACTaGGTAGTGGTGGTAGCACTCAGCGCTCCTTCTTCACGATCCCCA +
Preference number: 6 (lower is better)
Translates to: PSRLPLFPTLLSSRD*VVVVALSAPSSRSP
Trigger: TGGGGATCGTGAAGAAGGAGCGCTGAGTGCTACCACCACTACCAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGGCAGGCGGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp ATGCTGTGTAGCCTAGCCCCGTCCCGCCTGCCACTCTTCCCCACGTaGTTATCCAGCAGGGACTTGGTAGTGGTGGTAGCACTCAGCGCT +
Preference number: 6 (lower is better)
Translates to: MLCSLAPSRLPLFPT*LSSRDLVVVVALSA
Trigger: AGCGCTGAGTGCTACCACCACTACCAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGGCAGGCGGGACGGGGCTAGGCTACACAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp CAGTCTGGCTGGAGTCAGCGTCATCCCATCCAAACTTaGCCCCCACGTGGCCAATGCCAACAGCCAGCACAC +
Preference number: 6 (lower is better)
Translates to: QSGWSQRHPIQT*PPRGQCQQPAH
Trigger: GTGTGCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp TTGGCGATGGTGACAGATGCGGTGACTATGTCTCCCTaGTTGACGGGCTGGGAGGGCAGCCAGATGACCACA +
Preference number: 6 (lower is better)
Translates to: LAMVTDAVTMSP*LTGWEGSQMTT
Trigger: TGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACATAGTCACCGCATCTGTCACCATCGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp TCTTGCCTCACATCCCACTGCCGAGGCTCGCTGGTCTaGACGGTCAGGATGTTCACCCCCTTCTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: SCLTSHCRGSLV*TVRMFTPFFTL
Trigger: CAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCCTCGGCAGTGGGATGTGAGGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp CTGTACAGCATAATACAGTTCCACCGGACTCCCCTCTaGCCGCTCTGCTGGCCTCCTGCGCCCAGATACAAC +
Preference number: 6 (lower is better)
Translates to: LYSIIQFHRTPL*PLCWPPAPRYN
Trigger: GTTGTATCTGGGCGCAGGAGGCCAGCAGAGCGGCCAGAGGGGAGTCCGGTGGAACTGTATTATGCTGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp ACAGATGCGGTGACTATGTCTCCCTGCTTGACGGGCTaGGAGGGCAGCCAGATGACCACATTGCCATCCAGG +
Preference number: 6 (lower is better)
Translates to: TDAVTMSPCLTG*EGSQMTTLPSR
Trigger: CCTGGATGGCAATGTGGTCATCTGGCTGCCCTCCCAGCCCGTCAAGCAGGGAGACATAGTCACCGCATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp CCAAGATGGAGTCGGACAGGGGAGACAACACCTGGATaGTGGTCATTCCGACTTCCCGCCCAACCAAGACCC +
Preference number: 6 (lower is better)
Translates to: PRWSRTGETTPG*WSFRLPAQPRP
Trigger: GGGTCTTGGTTGGGCGGGAAGTCGGAATGACCACCATCCAGGTGTTGTCTCCCCTGTCCGACTCCATCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CCA 72 bp TCGGCCAAGATGGAGTCGGACAGGGGAGACAACACCTaGATGGTGGTCATTCCGACTTCCCGCCCAACCAAG +
Preference number: 6 (lower is better)
Translates to: SAKMESDRGDNT*MVVIPTSRPTK
Trigger: CTTGGTTGGGCGGGAAGTCGGAATGACCACCATCCAGGTGTTGTCTCCCCTGTCCGACTCCATCTTGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CAA 72 bp CCAGTCTGGCTGGAGTCAGCGTCATCCCATCCAAACTaGACCCCCACGTGGCCAATGCCAACAGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: PVWLESASSHPN*TPTWPMPTAST
Trigger: TGTGCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp TCCTTTTCTCCAGTCTGGCTGGAGTCAGCGTCATCCCATCCAAACTaGACCCCCACGTGGCCAATGCCAACAGCCAGCACACTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SFSPVWLESASSHPN*TPTWPMPTASTLLR
Trigger: GCGCAAGAGTGTGCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGGAGAAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp CCCCCACGTGGCCAATGCCAACAGCCAGCACACTCTTaGGCTTGGATTTCTGACAGGCTTCGGCAATGGACA +
Preference number: 6 (lower is better)
Translates to: PPRGQCQQPAHS*AWISDRLRQWT
Trigger: TGTCCATTGCCGAAGCCTGTCAGAAATCCAAGCGCAAGAGTGTGCTGGCTGTTGGCATTGGCCACGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TGTATATTATCCATGACCCCTCGGCTTTCGGTCACTTaGCCCAGTAGCGTGGCTAGGACCAGGCTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: CILSMTPRLSVT*PSSVARTRLSA
Trigger: GGCGCTGAGCCTGGTCCTAGCCACGCTACTGGGCCAAGTGACCGAAAGCCGAGGGGTCATGGATAATATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp GAGTCAGCGTCATCCCATCCAAACTTGACCCCCACGTaGCCAATGCCAACAGCCAGCACACTCTTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: ESASSHPNLTPT*PMPTASTLLRL
Trigger: CAAGCGCAAGAGTGTGCTGGCTGTTGGCATTGGCCACGTGGGGGTCAAGTTTGGATGGGATGACGCTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp AGGTGGCCTTGTTGTTCTCTGAGATGGGGTGTAGGGTaGCAGACAGCCCAGCCACCACCTGGACAGCTAAGT +
Preference number: 6 (lower is better)
Translates to: RWPCCSLRWGVG*QTAQPPPGQLS
Trigger: ACTTAGCTGTCCAGGTGGTGGCTGGGCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS GCA 72 bp ATCCCAATCTCTAGGTCACTCAGGCCATGGGCTGTCTaGATGAGACCATTCTCCTCCAGTGTGCCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: IPISRSLRPWAV*MRPFSSSVPLV
Trigger: GACCAGGGGCACACTGGAGGAGAATGGTCTCATGCAGACAGCCCATGGCCTGAGTGACCTAGAGATTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TCCTTTAGGAAGAATGCAGTCTCGGCTCTGAGGACGTaGAAGCTCACGGGCAGGTACGGCGGCAATGAAGAG +
Preference number: 6 (lower is better)
Translates to: SFRKNAVSALRT*KLTGRYGGNEE
Trigger: CTCTTCATTGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTCAGAGCCGAGACTGCATTCTTCCTAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp AACCAAGACCCTGCTGTCCTGCAGGGTGGCTATGTGTaGGGACTCCAGCTTCATAAAGTCAGCCACCAGGTG +
Preference number: 6 (lower is better)
Translates to: NQDPAVLQGGYV*GLQLHKVSHQV
Trigger: CACCTGGTGGCTGACTTTATGAAGCTGGAGTCCCCACACATAGCCACCCTGCAGGACAGCAGGGTCTTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp AGCGCTCCTTCTTCACGATCCCCAGGAAAGTTGCCATaGTATAGTTCATCCTGGCCTGGGCGTTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SAPSSRSPGKLP*YSSSWPGRSRS
Trigger: GGACCTGGAACGCCCAGGCCAGGATGAACTATACCATGGCAACTTTCCTGGGGATCGTGAAGAAGGAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp TGGTCCGAGACCTTGATGACATTCTCGTCTGTGGCCTaGCACTCCACCAACTCCGAGATGTCCCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: WSETLMTFSSVA*HSTNSEMSLRV
Trigger: CACCCTGAGGGACATCTCGGAGTTGGTGGAGTGCAAGGCCACAGACGAGAATGTCATCAAGGTCTCGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp AGCTCTTCTGCCATGGCCACAGCTGAGGTGGCCTTGTaGTTCTCTGAGATGGGGTGTAGGGTGACAGACAGC +
Preference number: 6 (lower is better)
Translates to: SSSAMATAEVAL*FSEMGCRVTDS
Trigger: GCTGTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCTGTGGCCATGGCAGAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CAA 72 bp AGCAGCTCTTCTGCCATGGCCACAGCTGAGGTGGCCTaGTTGTTCTCTGAGATGGGGTGTAGGGTGACAGAC +
Preference number: 6 (lower is better)
Translates to: SSSSAMATAEVA*LFSEMGCRVTD
Trigger: GTCTGTCACCCTACACCCCATCTCAGAGAACAACAAGGCCACCTCAGCTGTGGCCATGGCAGAAGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS GCA 72 bp CACTCAGCGCTCCTTCTTCACGATCCCCAGGAAAGTTaGCATGGTATAGTTCATCCTGGCCTGGGCGTTCCA +
Preference number: 6 (lower is better)
Translates to: HSALLLHDPQES*HGIVHPGLGVP
Trigger: TGGAACGCCCAGGCCAGGATGAACTATACCATGGCAACTTTCCTGGGGATCGTGAAGAAGGAGCGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp CTGCCACTCTTCCCCACGTTGTTATCCAGCAGGGACTaGGTAGTGGTGGTAGCACTCAGCGCTCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LPLFPTLLSSRD*VVVVALSAPSS
Trigger: TGAAGAAGGAGCGCTGAGTGCTACCACCACTACCAAGTCCCTGCTGGATAACAACGTGGGGAAGAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp GGGATGGTGAATGTGGCAAACTTGACCTTCTTCATCTaGGAGGTGGGTGAGTTTGCAGGCTCCTGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GMVNVANLTFFI*EVGEFAGSCLG
Trigger: GCCCAGGCAGGAGCCTGCAAACTCACCCACCTCCAAGATGAAGAAGGTCAAGTTTGCCACATTCACCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp GAGGACGTGGAAGCTCACGGGCAGGTACGGCGGCAATaGAGAGAATCTCTGTATATTATCCATGACCCCTCG +
Preference number: 6 (lower is better)
Translates to: EDVEAHGQVRRQ*RESLYIIHDPS
Trigger: CGAGGGGTCATGGATAATATACAGAGATTCTCTTCATTGCCGCCGTACCTGCCCGTGAGCTTCCACGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp CCTGAATCTTCTGCCGACGGTCACTGGCATGGTTCTTaGTCTCCTCCTCATCCTTTTCTCCAGTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: PESSADGHWHGS*SPPHPFLQSGW
Trigger: CCAGCCAGACTGGAGAAAAGGATGAGGAGGAGATCAAGAACCATGCCAGTGACCGTCGGCAGAAGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp GTCATGGATGCCTGGCCTTCCAGAGGCACCTGTTTGTaGCTGTACTTGAAGGCAAAGGTGGCGCAGTTAATG +
Preference number: 6 (lower is better)
Translates to: VMDAWPSRGTCL*LYLKAKVAQLM
Trigger: CATTAACTGCGCCACCTTTGCCTTCAAGTACAGGCACAAACAGGTGCCTCTGGAAGGCCAGGCATCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TCCATAGCAAGGGGGACGATGGCAACTAGGTCCTTCTaGCTGATGAAGATCTCCGACACAGCAATGTCCGTG +
Preference number: 6 (lower is better)
Translates to: SIARGTMATRSF*LMKISDTAMSV
Trigger: CACGGACATTGCTGTGTCGGAGATCTTCATCAGCCAGAAGGACCTAGTTGCCATCGTCCCCCTTGCTATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp GGTTCTGAGTTCCTTGGGTGCGCCCACGTCCAGGTCTaGACAAACCCACTTGATATCATCTTCCCCACTGAG +
Preference number: 6 (lower is better)
Translates to: GSEFLGCAHVQV*TNPLDIIFPTE
Trigger: CTCAGTGGGGAAGATGATATCAAGTGGGTTTGTCAAGACCTGGACGTGGGCGCACCCAAGGAACTCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp GGCTCGCTGGTCTGCACGGTCAGGATGTTCACCCCCTTCTTCACCTaGGCTCTTAGGATGAAATGGTCCACAGTAGAGTTATTGGCGATG +
Preference number: 6 (lower is better)
Translates to: GSLVCTVRMFTPFFT*ALRMKWSTVELLAM
Trigger: CATCGCCAATAACTCTACTGTGGACCATTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGACCAGCGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp CTCCAGGTAGGTTCTGAGTTCCTTGGGTGCGCCCACGTCCAGGTCTaGACAAACCCACTTGATATCATCTTCCCCACTGAGGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: LQVGSEFLGCAHVQV*TNPLDIIFPTEDGV
Trigger: AACTCCATCCTCAGTGGGGAAGATGATATCAAGTGGGTTTGTCAAGACCTGGACGTGGGCGCACCCAAGGAACTCAGAACCTACCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS TCA 72 bp ACGGCGGCAATGAAGAGAATCTCTGTATATTATCCATaGCCCCTCGGCTTTCGGTCACTTGGCCCAGTAGCG +
Preference number: 6 (lower is better)
Translates to: TAAMKRISVYYP*PLGFRSLGPVA
Trigger: CGCTACTGGGCCAAGTGACCGAAAGCCGAGGGGTCATGGATAATATACAGAGATTCTCTTCATTGCCGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 90 bp TCAGAGACTCAAACTTCTGGAAACCTACCATCCTTTGCTGCTTTTTaGGGGCACGTAGCAGCTCTTCTGCCATGGCCACAGCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SETQTSGNLPSFAAF*GHVAALLPWPQLRW
Trigger: CCACCTCAGCTGTGGCCATGGCAGAAGAGCTGCTACGTGCCCCAAAAAAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTGAGTCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145748.2
CDS CCA 72 bp TGGTTCTTGATCTCCTCCTCATCCTTTTCTCCAGTCTaGCTGGAGTCAGCGTCATCCCATCCAAACTTGACC +
Preference number: 6 (lower is better)
Translates to: WFLISSSSFSPV*LESASSHPNLT
Trigger: GGTCAAGTTTGGATGGGATGACGCTGACTCCAGCCAGACTGGAGAAAAGGATGAGGAGGAGATCAAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp GCCACCACCTGGACAGCTAAGTCTGTCACAGATACTTaGTCATCCAGCACAGTTACTGTCTTCTCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: ATTWTAKSVTDT*SSSTVTVFSAK
Trigger: CTTGGCCGAGAAGACAGTAACTGTGCTGGATGACAAAGTATCTGTGACAGACTTAGCTGTCCAGGTGGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119026.8
ENSMUST00000145748.2
CDS CAA 72 bp CAAACTTCTGGAAACCTACCATCCTTTGCTGCTTTTTaGGGGCACGTAGCAGCTCTTCTGCCATGGCCACAG +
Preference number: 6 (lower is better)
Translates to: QTSGNLPSFAAF*GHVAALLPWPQ
Trigger: CTGTGGCCATGGCAGAAGAGCTGCTACGTGCCCCAAAAAAGCAGCAAAGGATGGTAGGTTTCCAGAAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145748.2
CDS CAA 72 bp GTCTGCACGGTCAGGATGTTCACCCCCTTCTTCACCTaGGCTCTTAGGATGAAATGGTCCACAGTAGAGTTA +
Preference number: 6 (lower is better)
Translates to: VCTVRMFTPFFT*ALRMKWSTVEL
Trigger: TAACTCTACTGTGGACCATTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGTGAACATCCTGACCGTGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp ATTTCAAAATTCATCTGCATGACCTCGCTGAATAAATaGCTGCTCCTATTTCGTGCCCCAGGGCCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: ISKFICMTSLNK*LLLFRAPGPRR
Trigger: GCGCCTGGGCCCTGGGGCACGAAATAGGAGCAGCAATTTATTCAGCGAGGTCATGCAGATGAATTTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp AGGCCTTCAGCCTCCAGTCAAAGGGAAACTTACTGGTaGGGCCTAAAAAGTTGGGGTTCAACATCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RPSASSQRETYW*GLKSWGSTSSP
Trigger: TGGACTTGATGTTGAACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTGACTGGAGGCTGAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp TTGGCTCTTAGGATGAAATGGTCCACAGTAGAGTTATaGGCGATGGTGACAGATGCGGTGACTATGTCTCCC +
Preference number: 6 (lower is better)
Translates to: LALRMKWSTVEL*AMVTDAVTMSP
Trigger: GGGAGACATAGTCACCGCATCTGTCACCATCGCCAATAACTCTACTGTGGACCATTTCATCCTAAGAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TGTAGGCCTTCAGCCTCCAGTCAAAGGGAAACTTACTaGTTGGGCCTAAAAAGTTGGGGTTCAACATCAAGT +
Preference number: 6 (lower is better)
Translates to: CRPSASSQRETY*LGLKSWGSTSS
Trigger: ACTTGATGTTGAACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTGACTGGAGGCTGAAGGCCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CCA 72 bp TTCACCCCCTTCTTCACCTTGGCTCTTAGGATGAAATaGTCCACAGTAGAGTTATTGGCGATGGTGACAGAT +
Preference number: 6 (lower is better)
Translates to: FTPFFTLALRMK*STVELLAMVTD
Trigger: ATCTGTCACCATCGCCAATAACTCTACTGTGGACCATTTCATCCTAAGAGCCAAGGTGAAGAAGGGGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS CAA 72 bp CAGTCAAAGGGAAACTTACTGGTTGGGCCTAAAAAGTaGGGGTTCAACATCAAGTCCAGAGGGATGACCTTT +
Preference number: 6 (lower is better)
Translates to: QSKGNLLVGPKK*GFNIKSRGMTF
Trigger: AAAGGTCATCCCTCTGGACTTGATGTTGAACCCCAACTTTTTAGGCCCAACCAGTAAGTTTCCCTTTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8
CDS GCA 72 bp GAGAGGCTGCTGAAGCTGGCGATTTCAAAATTCATCTaGATGACCTCGCTGAATAAATTGCTGCTCCTATTT +
Preference number: 6 (lower is better)
Translates to: ERLLKLAISKFI*MTSLNKLLLLF
Trigger: AAATAGGAGCAGCAATTTATTCAGCGAGGTCATGCAGATGAATTTTGAAATCGCCAGCTTCAGCAGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119026.8