RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM132B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070498

Ensembl transcript IDs: ENSMUST00000031446.7, ENSMUST00000185104.2

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGGGGTGGGAGAGGCAGGGAGAACATCTTAGCTGTCCCATCATaGCTACCGGAGGCACGGCTGCCACGTTTCCAGCCTGGACATGTA +
Preference number: 1 (lower is better)
Translates to: AGGGRGRENILAVPS*LPEARLPRFQPGHV
Trigger: TACATGTCCAGGCTGGAAACGTGGCAGCCGTGCCTCCGGTAGCCATGATGGGACAGCTAAGATGTTCTCCCTGCCTCTCCCACCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp CTAAGAGGGCAGTGGAGACATCTTCAGGACCATAGTCAGCTCCTCTaGCCTCTGAGCCCCACCCGCATTGAAAGCCTGTCAATCACAAGC +
Preference number: 1 (lower is better)
Translates to: LRGQWRHLQDHSQLL*PLSPTRIESLSITS
Trigger: GCTTGTGATTGACAGGCTTTCAATGCGGGTGGGGCTCAGAGGGCAGAGGAGCTGACTATGGTCCTGAAGATGTCTCCACTGCCCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 90 bp ATAGGACCTGCATGCCCAGCCCTGTTTGTAAGCACATTGCAGTGCTaGGGGTGGGAGAGGCAGGGAGAACATCTTAGCTGTCCCATCATG +
Preference number: 1 (lower is better)
Translates to: IGPACPALFVSTLQC*GWERQGEHLSCPIM
Trigger: CATGATGGGACAGCTAAGATGTTCTCCCTGCCTCTCCCACCCCCAGCACTGCAATGTGCTTACAAACAGGGCTGGGCATGCAGGTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp ACCATCCAGAACACTCCTGATTACACACGGCCATTGGTCATGAGGTaGCTAACAGTGTCTGTGGGGTCGTGTCTACCGCCAGGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: TIQNTPDYTRPLVMR*LTVSVGSCLPPGCC
Trigger: ACAGCAGCCTGGCGGTAGACACGACCCCACAGACACTGTTAGTCACCTCATGACCAATGGCCGTGTGTAATCAGGAGTGTTCTGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp AGGCCCCACCTAAACCAAGAGGAGGCAGTCTGCTTTGTGTGTCCTTaGTTCCAGGGAGGGACCTCACTTTCAGAAATGAGTTCCCATTAT +
Preference number: 1 (lower is better)
Translates to: RPHLNQEEAVCFVCP*FQGGTSLSEMSSHY
Trigger: ATAATGGGAACTCATTTCTGAAAGTGAGGTCCCTCCCTGGAAGCAAGGACACACAAAGCAGACTGCCTCCTCTTGGTTTAGGTGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp CCCATGGAGCTGGAGTTAACAGAAGGTTGTGAGTCACCATGTGGGTaGTATGATCTGAACTCCGGGTCCTCTACAAGAGCAACAAGTACT +
Preference number: 1 (lower is better)
Translates to: PMELELTEGCESPCG*YDLNSGSSTRATST
Trigger: AGTACTTGTTGCTCTTGTAGAGGACCCGGAGTTCAGATCATAGCACCCACATGGTGACTCACAACCTTCTGTTAACTCCAGCTCCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 90 bp ACAGGCTCTTTAGATTCCCAGCAAATGACTGAGTCTGTGACACCTTaGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTC +
Preference number: 1 (lower is better)
Translates to: TGSLDSQQMTESVTP*YPHAQMWVHVHICV
Trigger: GACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACAGACTCAGTCATTTGCTGGGAATCTAAAGAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 90 bp CTCTCTCTCTCTGTGTGTGTTGAGACAGGACCTCTGACTTGGACCTaGAACTTGCCAATTAGGCTGACTAGAAATGAAGTCTCAGGTGTC +
Preference number: 1 (lower is better)
Translates to: LSLSVCVETGPLTWT*NLPIRLTRNEVSGV
Trigger: GACACCTGAGACTTCATTTCTAGTCAGCCTAATTGGCAAGTTCCAGGTCCAAGTCAGAGGTCCTGTCTCAACACACACAGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp AGTCTGAGAATGACTGACAGGCTCTTTAGATTCCCAGCAAATGACTaGGTCTGTGACACCTTGGTATCCACACGCACAGATGTGGGTACA +
Preference number: 1 (lower is better)
Translates to: SLRMTDRLFRFPAND*VCDTLVSTRTDVGT
Trigger: TGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACAGACTCAGTCATTTGCTGGGAATCTAAAGAGCCTGTCAGTCATTCTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp GCTAACCAGAGAGCTCTTGGCAGTAGCATATGTCAGCCAAGTTCATaGAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTCAGTACCTTC +
Preference number: 1 (lower is better)
Translates to: ANQRALGSSICQPSS*NACMFQLPSLVSTF
Trigger: GAAGGTACTGACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATGCTACTGCCAAGAGCTCTCTGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp GAGTCAAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTGGCTaGGCTTTCTCTCTCCTCTCCAGCCCCCAAAAGAATGAAACAAAC +
Preference number: 1 (lower is better)
Translates to: ESNSNPWAYAANSTG*AFSLLSSPQKNETN
Trigger: GTTTGTTTCATTCTTTTGGGGGCTGGAGAGGAGAGAGAAAGCTCAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp ACCTTAACCCCAAAAGCATCACATACAAATCCTGAAGATGGTCACTaGATTGTCTCTGAATGTCCCAGGTCACACAACCTTTGCCCATCT +
Preference number: 1 (lower is better)
Translates to: TLTPKASHTNPEDGH*IVSECPRSHNLCPS
Trigger: AGATGGGCAAAGGTTGTGTGACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATGCTTTTGGGGTTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp ATTTTTATGTGGATGCTGAGAGTCAAATTCCAATCCTTGGGCTTATaGAGCAAATTCTACTGGCTGAGCTTTCTCTCTCCTCTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: IFMWMLRVKFQSLGL*SKFYWLSFLSPLQP
Trigger: GGGCTGGAGAGGAGAGAGAAAGCTCAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCATCCACATAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp GCTTTGTGTGTCCTTGCTTCCAGGGAGGGACCTCACTTTCAGAAATaGGTTCCCATTATTTCTGTGATGGAAGATAGGACTTTAAATGGC +
Preference number: 1 (lower is better)
Translates to: ALCVLASREGPHFQK*VPIISVMEDRTLNG
Trigger: GCCATTTAAAGTCCTATCTTCCATCACAGAAATAATGGGAACTCATTTCTGAAAGTGAGGTCCCTCCCTGGAAGCAAGGACACACAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp ACAGGTGCAAGTCCAGATGTATATAAAAATAATGAGCCTTACTCCTaGCAGCTAAGGAGGCTACACTCACTCATCTTCCACCACATAGAT +
Preference number: 1 (lower is better)
Translates to: TGASPDVYKNNEPYS*QLRRLHSLIFHHID
Trigger: ATCTATGTGGTGGAAGATGAGTGAGTGTAGCCTCCTTAGCTGTCAGGAGTAAGGCTCATTATTTTTATATACATCTGGACTTGCACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 90 bp ATATATATGATATCCTGTATGGAGACTCCGTATGGCAAGACACAATaGGCTCCAGGGAATAAACAAGGAACATCAAACAAGCTCTTCTTT +
Preference number: 1 (lower is better)
Translates to: IYMISCMETPYGKTQ*APGNKQGTSNKLFF
Trigger: AAAGAAGAGCTTGTTTGATGTTCCTTGTTTATTCCCTGGAGCTCATTGTGTCTTGCCATACGGAGTCTCCATACAGGATATCATATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 90 bp AAGCATCACTCTCATGGCAGAGGAAAGGACTCGATAACGCACATCTaGATCAGATTATTTATCAAGAGTTATAATTTAGATATCTCAGCC +
Preference number: 1 (lower is better)
Translates to: KHHSHGRGKDSITHI*IRLFIKSYNLDISA
Trigger: GGCTGAGATATCTAAATTATAACTCTTGATAAATAATCTGATCCAGATGTGCGTTATCGAGTCCTTTCCTCTGCCATGAGAGTGATGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 90 bp GTGTCTGTATATATGTGTCTGCATATATGTCTGTATATATGTGTCTaGATATATGTTAAAAGGGAGCTTTCCATCAGAACCTGCCACTCA +
Preference number: 1 (lower is better)
Translates to: VSVYMCLHICLYICV*IYVKRELSIRTCHS
Trigger: TGAGTGGCAGGTTCTGATGGAAAGCTCCCTTTTAACATATATGCAGACACATATATACAGACATATATGCAGACACATATATACAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TCTGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTCATAGTCAGCTCCTCTaGCCTCTGAGCCCCACCCGC +
Preference number: 2 (lower is better)
Translates to: SVTPWYPHAQMWVHVHICHSQLL*PLSPTR
Trigger: GCGGGTGGGGCTCAGAGGGCAGAGGAGCTGACTATG...ACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp ATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCCTCAGCTCCTCTGCCCTCTaGGCCCCACCCGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: IGFRKHCLWSLLGTGRLLSSSAL*APPALK
Trigger: TTTCAATGCGGGTGGGGCTCAGAGGGCAGAGGAGCT...GAGGAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCCCAGGCTGCTGTCTCTaGATGTCTCCCATCCCCAGG +
Preference number: 2 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSPGCCL*MSPIPR
Trigger: CCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGG...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp ATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCCTCGTGTCTGCCTGTCTCTaGTTCCCCGTGTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: IGFRKHCLWSLLGTGRLLVSACL*FPVCWD
Trigger: ATCCCAGCACACGGGGAATCAGAGACAGGCAGACAC...GAGGAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TATGGCCAAAGAGCTCACAACCTTTGCCCTCTCCTAACTCCCCCAGGAAGAATCGAGTCACCATGTGGGTaGTATGATCTGAACTCCGGG +
Preference number: 2 (lower is better)
Translates to: YGQRAHNLCPLLTPPGRIESPCG*YDLNSG
Trigger: CCCGGAGTTCAGATCATAGCACCCACATGGTGACTC...GATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CCA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCAAGCACATTGCAGTGCTaGGGGTGGGAGAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: EANSLSMSKRAVETSSGPSTLQC*GWERQG
Trigger: TCCCTGCCTCTCCCACCCCCAGCACTGCAATGTGCT...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp GGGAGACTCCTCACTGATGGGCACAGCTTCAGTGTGGTCCCACTATTGGAAAGCTTTGTTTGTAAAAGGTaGTCCTTGGGCTCTGGGACA +
Preference number: 2 (lower is better)
Translates to: GRLLTDGHSFSVVPLLESFVCKR*SLGSGT
Trigger: TGTCCCAGAGCCCAAGGATCACCTTTTACAAACAAA...GCTTTCCAATAGTGGGACCACACTGAAGCTGTGCCCATCAGTGAGGAGTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp AAGATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCATGACACTGCGATGCTaGGCCCTTCCCAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: KIGFRKHCLWSLLGTGRLMTLRC*ALPKVS
Trigger: ACTCACCTTGGGAAGGGCTCAGCATCGCAGTGTCAT...GAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTTGGGACTACCAGCTCTaGTCCAGCCTTTCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCWDYQL*SSLSRN
Trigger: GTTTCTGGAAAGGCTGGAGCAGAGCTGGTAGTCCCA...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 90 bp CTCTCTGTGTGTGTTGAGACAGGACCTCTGACTTGGACCTGGAACTaGCCAATTAGGCTGACTAGAAATGAAGTCTCAGGTGTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LSVCVETGPLTWTWN*PIRLTRNEVSGVCL
Trigger: CAGGCAGACACCTGAGACTTCATTTCTAGTCAGCCTAATTGGCAAGTTCCAGGTCCAAGTCAGAGGTCCTGTCTCAACACACACAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTAATGAGCCTTACTCCTaGCAGCTAAGGAGGCTACAC +
Preference number: 2 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCNEPYS*QLRRLH
Trigger: GTGTAGCCTCCTTAGCTGTCAGGAGTAAGGCTCATT...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp ATGCTGAGAGTCAAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTGGCTGGTAAGCACATTGCAGTaGTGGGGGTGGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: MLRVKFQSLGLCSKFYWLVSTLQ*WGWERQ
Trigger: CTGCCTCTCCCACCCCCAGCACTGCAATGTGCTTAC...CAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCGTCACCCCCTATTGCTaGTCAGACCCACTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVVTPYC*SDPLFH
Trigger: ATGGAACAGTGGGTCTGATCAGCAATAGGGGGTGAC...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp GTACCTTCCATTCCCAGGAGCCATTCTAAACACAAAAGCAAGCGAACATACTTCCCATTGGTCATGAGGTaGCTAACAGTGTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: VPSIPRSHSKHKSKRTYFPLVMR*LTVSVG
Trigger: CCCCACAGACACTGTTAGTCACCTCATGACCAATGG...GAAGTATGTTCGCTTGCTTTTGTGTTTAGAATGGCTCCTGGGAATGGAAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTCCTGCCACTCAACTTTaGTTTAAACTGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCPATQL*FKLMVS
Trigger: GGACACCATCAGTTTAAATCAAAGTTGAGTGGCAGG...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp AAGATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCCCTGAAGATGGTCACTaGATTGTCTCTGAATGTCCC +
Preference number: 2 (lower is better)
Translates to: KIGFRKHCLWSLLGTGRLPEDGH*IVSECP
Trigger: GGGACATTCAGAGACAATGCAGTGACCATCTTCAGG...GAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCCAAGAGGAGGCAGTCTaGTTTGTGTGTCCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVQEEAV*FVCPCF
Trigger: GAAGCAAGGACACACAAAGCAGACTGCCTCCTCTTG...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTCCACACGCACAGATGTaGGTACACGTGCATATCTGT +
Preference number: 2 (lower is better)
Translates to: HHIQILKMVTALSLNVPGPHAQM*VHVHIC
Trigger: ACAGATATGCACGTGTACCCACATCTGTGCGTGTGG...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp AAATGTCACATTTGGCTAAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGACCATGTGGGTGCTATaGTCTGAACTCCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: KCHIWLSQKSLSFSRLFMTMWVL*SELRVL
Trigger: GAGGACCCGGAGTTCAGATCATAGCACCCACATGGT...CATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTTAGCCAAATGTGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTCTCAGCCATGAAAACTaGAATCCAGGCAAATGCAGG +
Preference number: 2 (lower is better)
Translates to: HHIQILKMVTALSLNVPGLSHEN*NPGKCR
Trigger: CCTGCATTTGCCTGGATTTCAGTTTTCATGGCTGAG...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCTCACTGCATTGTCTCTaGATGTCCCAGGTCACACAA +
Preference number: 2 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVSLHCL*MSQVTQ
Trigger: TTGTGTGACCTGGGACATTCAGAGACAATGCAGTGA...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CCA 90 bp AAGATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCTCCATATTGTGGTATTaGAGCCTTTCTTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: KIGFRKHCLWSLLGTGRLSILWY*SLSSLR
Trigger: TCTGAGGGAAGAAAGGCTCCAATACCACAATATGGA...GAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTTGTCTAAGAGGGCAGTaGAGACATCTTCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: HHIQILKMVTALSLNVPGCLRGQ*RHLQDH
Trigger: ATGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACA...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTCCCCAGGAGCCAGTGTaGCAGACATCACCTAGCTTG +
Preference number: 2 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCPQEPV*QTSPSL
Trigger: CAAGCTAGGTGATGTCTGTCACACTGGCTCCTGGGG...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCCCTCACTTTCAGAAATaGGTTCCCATTATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSPHFQK*VPIISV
Trigger: CACAGAAATAATGGGAACTCATTTCTGAAAGTGAGG...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCGTAAATCTGCTGCTCTaGACAGGTGTTTTGGGACTA +
Preference number: 2 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVVNLLL*TGVLGL
Trigger: TAGTCCCAAAACACCTGTGCAGAGCAGCAGATTTAC...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCAGGCTTGATAGTTTATaGTATCTCCCTCATTCTAGT +
Preference number: 2 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSRLDSL*YLPHSS
Trigger: ACTAGAATGAGGGAGATAGCATAAACTATCAAGCCT...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCTGTCAGCCAAGTTCATaGAATGCCTGTATGTTCCAG +
Preference number: 2 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIACQPSS*NACMFQ
Trigger: CTGGAACATACAGGCATTGCATGAACTTGGCTGACA...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCGTCAATCACAAGCAATaGTTACTTGTATCACCCTTG +
Preference number: 2 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVVNHKQ*LLVSPL
Trigger: CAAGGGTGATACAAGTAAGCATTGCTTGTGATTGAC...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 90 bp TTTGAATTAATACATTGCATTGAGCACAGAGGACTTATATCCATATaGTGGTATTGGAGCCTTTCTTCCCTCAGAACTGTACCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: FELIHCIEHRGLISI*WYWSLSSLRTVPPG
Trigger: TCCTGGGGGTACAGTTCTGAGGGAAGAAAGGCTCCAATACCACAATATGGATATAAGTCCTCTGTGCTCAATGCAATGTATTAATTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR GCA 90 bp ATGCTGAGAGTCAAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTGGCTGAATGAGTGTCCACTGTaGTTTAAAAGGGCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: MLRVKFQSLGLCSKFYWLNECPL*FKRARN
Trigger: ATTTCTAGCCCTTTTAAAGCACAGTGGACACTCATT...CAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR TCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTGAAATACCAATGTCATaGAGGAGAGACAACACTGTC +
Preference number: 2 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCEIPMS*RRDNTV
Trigger: GACAGTGTTGTCTCTCCTTCATGACATTGGTATTTC...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp GGGAGAGGCAGGGAGAACATCTTAGCTGTCCCATCATaGCTACCGGAGGCACGGCTGCCACGTTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: GRGRENILAVPS*LPEARLPRFQP
Trigger: AGGCTGGAAACGTGGCAGCCGTGCCTCCGGTAGCCATGATGGGACAGCTAAGATGTTCTCCCTGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp TCTGTGGGGTCGTGTCTACCGCCAGGCTGCTGTCTCTaGATGTCTCCCATCCCCAGGAGCCAGTGTGACAGA +
Preference number: 3 (lower is better)
Translates to: SVGSCLPPGCCL*MSPIPRSQCDR
Trigger: TCTGTCACACTGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGACCCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp CTGTCTCTGAATGTCTCCCATCCCCAGGAGCCAGTGTaGCAGACATCACCTAGCTTGAGCCTGAGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: LSLNVSHPQEPV*QTSPSLSLSPP
Trigger: TGGAGGGCTCAGGCTCAAGCTAGGTGATGTCTGTCACACTGGCTCCTGGGGATGGGAGACATTCAGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp AACCCAAGGCCCCACCTAAACCAAGAGGAGGCAGTCTaGTTTGTGTGTCCTTGCTTCCAGGGAGGGACCTCA +
Preference number: 3 (lower is better)
Translates to: NPRPHLNQEEAV*FVCPCFQGGTS
Trigger: TGAGGTCCCTCCCTGGAAGCAAGGACACACAAAGCAGACTGCCTCCTCTTGGTTTAGGTGGGGCCTTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp CAGTGGAGACATCTTCAGGACCATAGTCAGCTCCTCTaGCCTCTGAGCCCCACCCGCATTGAAAGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: QWRHLQDHSQLL*PLSPTRIESLS
Trigger: TGACAGGCTTTCAATGCGGGTGGGGCTCAGAGGGCAGAGGAGCTGACTATGGTCCTGAAGATGTCTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp GCATGCCCAGCCCTGTTTGTAAGCACATTGCAGTGCTaGGGGTGGGAGAGGCAGGGAGAACATCTTAGCTGT +
Preference number: 3 (lower is better)
Translates to: ACPALFVSTLQC*GWERQGEHLSC
Trigger: ACAGCTAAGATGTTCTCCCTGCCTCTCCCACCCCCAGCACTGCAATGTGCTTACAAACAGGGCTGGGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp CCAGCACACCTATCCCCCAGCTCCAGTCCTTTCATGTaGCACCTACCTCCAAAGTCCCTATACCTTAACCCC +
Preference number: 3 (lower is better)
Translates to: PAHLSPSSSPFM*HLPPKSLYLNP
Trigger: GGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACTGGAGCTGGGGGATAGGTGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp GACATCTTCAGGACCATAGTCAGCTCCTCTGCCCTCTaGGCCCCACCCGCATTGAAAGCCTGTCAATCACAA +
Preference number: 3 (lower is better)
Translates to: DIFRTIVSSSAL*APPALKACQSQ
Trigger: TTGTGATTGACAGGCTTTCAATGCGGGTGGGGCTCAGAGGGCAGAGGAGCTGACTATGGTCCTGAAGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp AACACTCCTGATTACACACGGCCATTGGTCATGAGGTaGCTAACAGTGTCTGTGGGGTCGTGTCTACCGCCA +
Preference number: 3 (lower is better)
Translates to: NTPDYTRPLVMR*LTVSVGSCLPP
Trigger: TGGCGGTAGACACGACCCCACAGACACTGTTAGTCACCTCATGACCAATGGCCGTGTGTAATCAGGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp GTACCTTCCATTCCCAGGAGCCATTCTAAACACAAAAGCAAGCGAACATACTTCCAGACATCACCTAGCTaGAGCCTGAGCCCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: VPSIPRSHSKHKSKRTYFQTSPS*SLSPPG
Trigger: GCCTGGAGGGCTCAGGCTCAAGCTAGGTGATGTCTG...GAAGTATGTTCGCTTGCTTTTGTGTTTAGAATGGCTCCTGGGAATGGAAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp GAACATACTTCTGGGGGATATAGCATAGGACCTGCATaGCCAGCCCTGTTTGTAAGCACATTGCAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: EHTSGGYSIGPA*PALFVSTLQCW
Trigger: CCAGCACTGCAATGTGCTTACAAACAGGGCTGGGCATGCAGGTCCTATGCTATATCCCCCAGAAGTATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp CTGGAGTTAACAGAAGGTTGTGAGTCACCATGTGGGTaGTATGATCTGAACTCCGGGTCCTCTACAAGAGCA +
Preference number: 3 (lower is better)
Translates to: LELTEGCESPCG*YDLNSGSSTRA
Trigger: TGCTCTTGTAGAGGACCCGGAGTTCAGATCATAGCACCCACATGGTGACTCACAACCTTCTGTTAACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp CTAAACCAAGAGGAGGCAGTCTGCTTTGTGTGTCCTTaGTTCCAGGGAGGGACCTCACTTTCAGAAATGAGT +
Preference number: 3 (lower is better)
Translates to: LNQEEAVCFVCP*FQGGTSLSEMS
Trigger: ACTCATTTCTGAAAGTGAGGTCCCTCCCTGGAAGCAAGGACACACAAAGCAGACTGCCTCCTCTTGGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCAGGAGGCAGTCTGCTTaGTGTGTCCTTGCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVRRQSA*CVLASR
Trigger: CCTGGAAGCAAGGACACACAAAGCAGACTGCCTCCT...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp GGGAGACTCCTCACTGATGGGCACAGCTTCAGTGTGGTCCCACTATTGGAAAGCAATATCCCACTGTATTaGAGTCTCTTAAGTCCAGCA +
Preference number: 3 (lower is better)
Translates to: GRLLTDGHSFSVVPLLESNIPLY*SLLSPA
Trigger: TGCTGGACTTAAGAGACTCAAATACAGTGGGATATT...GCTTTCCAATAGTGGGACCACACTGAAGCTGTGCCCATCAGTGAGGAGTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp ACACCACCCACTGCGCCTGGATTTTTATGTGGATGCTaGGAGTCAAATTCCAATCCTTGGGCTTATGCAGCA +
Preference number: 3 (lower is better)
Translates to: TPPTAPGFLCGC*ESNSNPWAYAA
Trigger: TGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCATCCACATAAAAATCCAGGCGCAGTGGGTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCGACAGGACCTCTGACTaGGACCTGGAACTTGCCAAT +
Preference number: 3 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVDRTSD*DLELAN
Trigger: ATTGGCAAGTTCCAGGTCCAAGTCAGAGGTCCTGTC...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCCTGTTTGTAAGCACATaGCAGTGCTGGGGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIALFVST*QCWGWE
Trigger: CTCCCACCCCCAGCACTGCAATGTGCTTACAAACAG...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp ATGACTGACAGGCTCTTTAGATTCCCAGCAAATGACTaGGTCTGTGACACCTTGGTATCCACACGCACAGAT +
Preference number: 3 (lower is better)
Translates to: MTDRLFRFPAND*VCDTLVSTRTD
Trigger: ATCTGTGCGTGTGGATACCAAGGTGTCACAGACTCAGTCATTTGCTGGGAATCTAAAGAGCCTGTCAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp GAGGTCAGCCCTTTGACATCAGTGACCTCCTGCATGTaGTTCAGGCTTTGGGCCTTTAAAAATCCCATTTTT +
Preference number: 3 (lower is better)
Translates to: EVSPLTSVTSCM*FRLWAFKNPIF
Trigger: AAAAATGGGATTTTTAAAGGCCCAAAGCCTGAAGCACATGCAGGAGGTCACTGATGTCAAAGGGCTGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp CCCAGGAAGAATCTATTCTCACAAGCATCACTCTCATaGCAGAGGAAAGGACTCGATAACGCACATCTGGAT +
Preference number: 3 (lower is better)
Translates to: PRKNLFSQASLS*QRKGLDNAHLD
Trigger: ATCCAGATGTGCGTTATCGAGTCCTTTCCTCTGCCATGAGAGTGATGCTTGTGAGAATAGATTCTTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp AAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTaGCTGAGCTTTCTCTCTCCTCTCCAGCCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: KFQSLGLCSKFY*LSFLSPLQPPK
Trigger: TTTTGGGGGCTGGAGAGGAGAGAGAAAGCTCAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp TCTGTGTGTGTTGAGACAGGACCTCTGACTTGGACCTaGAACTTGCCAATTAGGCTGACTAGAAATGAAGTC +
Preference number: 3 (lower is better)
Translates to: SVCVETGPLTWT*NLPIRLTRNEV
Trigger: GACTTCATTTCTAGTCAGCCTAATTGGCAAGTTCCAGGTCCAAGTCAGAGGTCCTGTCTCAACACACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp AATGGGCTAAAGATAGGATTCAGAAAACACTGTCTATaGTCACTGCTGGGGACTGGGAGACTCCTCACTGAT +
Preference number: 3 (lower is better)
Translates to: NGLKIGFRKHCL*SLLGTGRLLTD
Trigger: ATCAGTGAGGAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTTTAGCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp CAACAACACCGTGAATGTGCACAGAAGCTAATTCACTaGGTATGTCTAAGAGGGCAGTGGAGACATCTTCAG +
Preference number: 3 (lower is better)
Translates to: QQHRECAQKLIH*VCLRGQWRHLQ
Trigger: CTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTCTGTGCACATTCACGGTGTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp AGAGCTCTTGGCAGTAGCATATGTCAGCCAAGTTCATaGAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTC +
Preference number: 3 (lower is better)
Translates to: RALGSSICQPSS*NACMFQLPSLV
Trigger: GACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATGCTACTGCCAAGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTATCCATATTGTGGTATaGGAGCCTTTCTTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: HHIQILKMVTALSLNVPGIHIVV*EPFFPQ
Trigger: CTGAGGGAAGAAAGGCTCCAATACCACAATATGGAT...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp CCAAAAGCATCACATACAAATCCTGAAGATGGTCACTaGATTGTCTCTGAATGTCCCAGGTCACACAACCTT +
Preference number: 3 (lower is better)
Translates to: PKASHTNPEDGH*IVSECPRSHNL
Trigger: AAGGTTGTGTGACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATGCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CCA 72 bp CATTGCATTGAGCACAGAGGACTTATATCCATATTGTaGTATTGGAGCCTTTCTTCCCTCAGAACTGTACCC +
Preference number: 3 (lower is better)
Translates to: HCIEHRGLISIL*YWSLSSLRTVP
Trigger: GGGTACAGTTCTGAGGGAAGAAAGGCTCCAATACCACAATATGGATATAAGTCCTCTGTGCTCAATGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp AAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGATGCTTATAAACAGCACCACTCTGACACTTTGTaGAGTCACCCCCTATTGCTG +
Preference number: 3 (lower is better)
Translates to: KPKIPVFLKAIHDAYKQHHSDTL*SHPLLL
Trigger: CAGCAATAGGGGGTGACTCAACAAAGTGTCAGAGTG...GTGCTGTTTATAAGCATCATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCACAAAAATGTCACATTaGGCTAAGCCAAAAATCCCT +
Preference number: 3 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSTKMSH*AKPKIP
Trigger: AGGGATTTTTGGCTTAGCCAAATGTGACATTTTTGT...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR-3UTR CAA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCAGGGCCCTGGAGATTTaGATTTTAAGGCTTGATAGT +
Preference number: 3 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVRALEI*ILRLDS
Trigger: ACTATCAAGCCTTAAAATCAAAATCTCCAGGGCCCT...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp TTCAGCAAAACTCTGTCCCACCATCCACCCTCTATGTaGCAGGTGAGATGCATTGCATTATACAAATACAGT +
Preference number: 3 (lower is better)
Translates to: FSKTLSHHPPSM*QVRCIALYKYS
Trigger: ACTGTATTTGTATAATGCAATGCATCTCACCTGTCACATAGAGGGTGGATGGTGGGACAGAGTTTTGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR TCA 72 bp AAACTCTGTCCCACCATCCACCCTCTATGTGACAGGTaGGATGCATTGCATTATACAAATACAGTTTTGATG +
Preference number: 3 (lower is better)
Translates to: KLCPTIHPLCDR*DALHYTNTVLM
Trigger: CATCAAAACTGTATTTGTATAATGCAATGCATCTCACCTGTCACATAGAGGGTGGATGGTGGGACAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp GCCCTGGAGATTTTGATTTTAAGGCTTGATAGTTTATaGTATCTCCCTCATTCTAGTCCATGTATTTCAGAG +
Preference number: 3 (lower is better)
Translates to: ALEILILRLDSL*YLPHSSPCISE
Trigger: CTCTGAAATACATGGACTAGAATGAGGGAGATAGCATAAACTATCAAGCCTTAAAATCAAAATCTCCAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR GCA 72 bp TATATGTGTCTGCATATATGTCTGTATATATGTGTCTaGATATATGTTAAAAGGGAGCTTTCCATCAGAACC +
Preference number: 3 (lower is better)
Translates to: YMCLHICLYICV*IYVKRELSIRT
Trigger: GGTTCTGATGGAAAGCTCCCTTTTAACATATATGCAGACACATATATACAGACATATATGCAGACACATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCAAGGAGCCGTTTGCCCTaGTCTGGGTGTCCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPRSRLP*SGCPGG
Trigger: ACCACCCGGACACCCAGAGCAGGGCAAACGGCTCCT...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCACGAAAGGAGTGGGCATaGGCAGGAAGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPRKEWA*AGSPRA
Trigger: TGCCCTGGGACTTCCTGCTCATGCCCACTCCTTTCG...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GGGAGACTCCTCACTGATGGGCACAGCTTCAGTGTGGTCCCACTATTGGAAAGCGGACCTGCACAGTGGTaGTGCCCGGCTCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRLLTDGHSFSVVPLLESGPAQW*CPAPVL
Trigger: CAGGACGGGAGCCGGGCATCACCACTGTGCAGGTCC...GCTTTCCAATAGTGGGACCACACTGAAGCTGTGCCCATCAGTGAGGAGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCACCCAGCCCATGCCAGTaGCATAGAACAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPPSPCQ*HRTVSA
Trigger: TGCAGACACTGTTCTATGTCACTGGCATGGGCTGGG...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TATGGCCAAAGAGCTCACAACCTTTGCCCTCTCCTAACTCCCCCAGGAAGAATCCCGGGTGGTGGCCCATaGAGGACAGGACAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: YGQRAHNLCPLLTPPGRIPGGGP*RTGQPW
Trigger: CCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGG...GATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCACTGACTATGGCTTCCTaGTGTGGGGCTTGGAGAACG +
Preference number: 4 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPLTMAS*CGAWRT
Trigger: CGTTCTCCAAGCCCCACAGCAGGAAGCCATAGTCAG...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCATCATTGCTGCCTCCTTaGTGCTCGTGCATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPSLLPP*CSCIPG
Trigger: ACCTGGGATGCACGAGCAGCAAGGAGGCAGCAATGA...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTGGGTGGGGAAGCTGGTaGAGGCATCTGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCGWGSW*RHLLPL
Trigger: AAGCGGGAGCAGATGCCTTCACCAGCTTCCCCACCC...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTAAGAGGCGAGAGGACCTaGACAGTGGTGATGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPHRFELRPRAMSVHCALRGERT*TVVMPG
Trigger: GCCGGGCATCACCACTGTGCAGGTCCTCTCGCCTCT...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTATGGGCTGCTCGCTCCTaGCTTCCCTCGCGCTCTATG +
Preference number: 4 (lower is better)
Translates to: PPHRFELRPRAMSVHCALWAARS*LPSRSM
Trigger: CATAGAGCGCGAGGGAAGCCAGGAGCGAGCAGCCCA...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTACCTCCGAGGGGAGAGTaGTGTCCACAGGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PPHRFELRPRAMSVHCALPPRGE*CPQGSP
Trigger: TGGAGAACCCTGTGGACATCACTCTCCCCTCGGAGG...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GGAACATCAAACAAGCTCTTCTTTAAGTGCTTCCGAAACAACCCCTCCCCCTCATCCTCCAGTGGGCACTaGCCAGCCTCGTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTSNKLFFKCFRNNPSPSSSSGH*PASLAG
Trigger: TCCAGCCAACGAGGCTGGCCAGTGCCCACTGGAGGA...TGAGGGGGAGGGGTTGTTTCGGAAGCACTTAAAGAAGAGCTTGTTTGATGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GGAACATCAAACAAGCTCTTCTTTAAGTGCTTCCGAAACAACCCCTCCCCCTCACCGAGCAGGGAGCACTaGCTGAGGCTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GTSNKLFFKCFRNNPSPSPSREH*LRLLLF
Trigger: GAACAGGAGGAGCCTCAGCCAGTGCTCCCTGCTCGG...TGAGGGGGAGGGGTTGTTTCGGAAGCACTTAAAGAAGAGCTTGTTTGATGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTCGCACCAGGGCATGCTaGTACTGCAGGGTACACCCT +
Preference number: 4 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCRTRAC*YCRVHP
Trigger: AGGGTGTACCCTGCAGTACCAGCATGCCCTGGTGCG...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp TATGGCCAAAGAGCTCACAACCTTTGCCCTCTCCTAACTCCCCCAGGAAGAATCGGTCCAGACCTGAGCTaGACCACTCAGGCAACAACT +
Preference number: 4 (lower is better)
Translates to: YGQRAHNLCPLLTPPGRIGPDLS*TTQATT
Trigger: AGTTGTTGCCTGAGTGGTTCAGCTCAGGTCTGGACC...GATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTAAATCTCCTCCTGCACTaGCCACTGGTCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPHRFELRPRAMSVHCALNLLLH*PLVLVA
Trigger: AGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATT...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GGGAGACTCCTCACTGATGGGCACAGCTTCAGTGTGGTCCCACTATTGGAAAGCACAGGATATTCTACCTaGCAGGTGATTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRLLTDGHSFSVVPLLESTGYST*QVICWA
Trigger: GGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGT...GCTTTCCAATAGTGGGACCACACTGAAGCTGTGCCCATCAGTGAGGAGTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTACACGCACCAGGGCATaGTGGTACTGCAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCTRTRA*WYCRVH
Trigger: GTGTACCCTGCAGTACCAGCATGCCCTGGTGCGTGT...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTGCCCGGCTCCCGTCCTaGCAGGATCCTGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: HHIQILKMVTALSLNVPGARLPS*QDPAIL
Trigger: CAGAATGGCAGGATCCTGGCAGGACGGGAGCCGGGC...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTTCTGGGCTCGGTGGATaGAGAGTGTGGCGGATCGGG +
Preference number: 4 (lower is better)
Translates to: HHIQILKMVTALSLNVPGSGLGG*RVWRIG
Trigger: CCCGATCCGCCACACTCTTCATCCACCGAGCCCAGA...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTCTCTGGGTGTCCGGGTaGTGGCCCATGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSLWVSG*WPMQDR
Trigger: CCTGTCCTGCATGGGCCACCACCCGGACACCCAGAG...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCCCTGGTTGGCCTCCTTaGGGAAGAAAGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSPGWPP*GRKPLL
Trigger: CAGAAGAGGCTTTCTTCCTCAAGGAGGCCAACCAGG...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp ATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCCTCAAGAGTGAACTTCTCTaGCAGGGAGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IGFRKHCLWSLLGTGRLLKSELL*QGATGE
Trigger: CTCACCAGTGGCTCCCTGGCAGAGAAGTTCACTCTT...GAGGAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp ATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCCTCGAGAAACCAAAAAGGTaGCCGTGTCCCCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: IGFRKHCLWSLLGTGRLLEKPKR*PCPLLG
Trigger: TCCGAGAAGGGGACACGGCCACCTTTTTGGTTTCTC...GAGGAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp TATGGCCAAAGAGCTCACAACCTTTGCCCTCTCCTAACTCCCCCAGGAAGAATCTCCCATTGGAGACTGTaGGGTTGTGCTCTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: YGQRAHNLCPLLTPPGRISHWRL*GCALVG
Trigger: ACCAACAAGAGCACAACCCCACAGTCTCCAATGGGA...GATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCAGATAGAGTTGGTGTATaGGCCCCCATCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: EANSLSMSKRAVETSSGPDRVGV*APILGE
Trigger: CTCCCCGAGGATGGGGGCCCATACACCAACTCTATC...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp CAACCTCCCTCTGTATGGCCAAAGAGCTCACAACCTTaGCCCTCTCCTAACTCCCCCAGGAAGAATCTATTC +
Preference number: 4 (lower is better)
Translates to: QPPSVWPKSSQP*PSPNSPRKNLF
Trigger: GAATAGATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATACAGAGGGAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp TCTGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTCGGTTACCAGGTTGGTaGTGTCAAACTGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: SVTPWYPHAQMWVHVHICRLPGW*CQTANQ
Trigger: CTGATTGGCAGTTTGACATCACCAACCTGGTAACCG...ACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCAAGAGTTCCATGGCTGTaGCACCCAGCAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EANSLSMSKRAVETSSGPRVPWL*HPAMLG
Trigger: TCCCAGCATTGCTGGGTGGCACAGCCATGGAACTCT...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp ATGCTGAGAGTCAAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTGGCTGTGCTCAATCTCCTCCTaGACTGCCCACTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MLRVKFQSLGLCSKFYWLCSISS*TAHWSS
Trigger: CGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCA...CAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTTTGGTGATGTCAAACTaGCAATCAGGGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCLVMSN*QSGPSM
Trigger: CATGCTGGGCCCTGATTGGCAGTTTGACATCACCAA...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCATTGCTGCCTCCTTGCTaGTCGTGCATCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: EANSLSMSKRAVETSSGPLLPPC*SCIPGS
Trigger: TGAACCTGGGATGCACGAGCAGCAAGGAGGCAGCAA...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp GAAAAAGTCTCCTTGAGAGGTTCAGAGGTCAGCCCTTaGACATCAGTGACCTCCTGCATGTGCTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EKVSLRGSEVSP*TSVTSCMCFRL
Trigger: AAGCCTGAAGCACATGCAGGAGGTCACTGATGTCAAAGGGCTGACCTCTGAACCTCTCAAGGAGACTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCGGAAGGCAAACATCTTaGCACACGGAAGATCATCCC +
Preference number: 4 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSGRQTS*HTEDHP
Trigger: GGGATGATCTTCCGTGTGTCAAGATGTTTGCCTTCC...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp ATGCTGAGAGTCAAATTCCAATCCTTGGGCTTATGCAGCAAATTCTACTGGCTGCCAGGGAGCCACTGGTaGGAGAAACCAAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: MLRVKFQSLGLCSKFYWLPGSHW*EKPKRW
Trigger: CCACCTTTTTGGTTTCTCTCACCAGTGGCTCCCTGG...CAGCCAGTAGAATTTGCTGCATAAGCCCAAGGATTGGAATTTGACTCTCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TATGGCCAAAGAGCTCACAACCTTTGCCCTCTCCTAACTCCCCCAGGAAGAATCGTTGGCTGGATAAAGTaGAAAGTAGAGTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: YGQRAHNLCPLLTPPGRIVGWIK*KVEFHG
Trigger: GCCATGGAACTCTACTTTGCACTTTATCCAGCCAAC...GATTCTTCCTGGGGGAGTTAGGAGAGGGCAAAGGTTGTGAGCTCTTTGGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp GTACCTTCCATTCCCAGGAGCCATTCTAAACACAAAAGCAAGCGAACATACTTCCCTCCTTGCTGCTCGTaGATCCCAGGTTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: VPSIPRSHSKHKSKRTYFPPCCS*IPGSNL
Trigger: GAGGTTTGAACCTGGGATGCACGAGCAGCAAGGAGG...GAAGTATGTTCGCTTGCTTTTGTGTTTAGAATGGCTCCTGGGAATGGAAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCTGCCACCGATGTCATTaGTGCCTCCTTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVCHRCH*CLLAAR
Trigger: ACGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCA...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp TGTGACACCTTGGTATCCACACGCACAGATGTGGGTACACGTGCATATCTGTGTCTGCCATTCTGTAACTaGGCAATTTTTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CDTLVSTRTDVGTRAYLCLPFCN*AIFGSS
Trigger: GGAGGAGCCAAAAATTGCCCAGTTACAGAATGGCAG...ACACAGATATGCACGTGTACCCACATCTGTGCGTGTGGATACCAAGGTGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GTACCTTCCATTCCCAGGAGCCATTCTAAACACAAAAGCAAGCGAACATACTTCGGGTTGTGCTCTTGTTaGTCCTGTCCTCGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VPSIPRSHSKHKSKRTYFGLCSC*SCPRGQ
Trigger: TTGGCCACGAGGACAGGACCAACAAGAGCACAACCC...GAAGTATGTTCGCTTGCTTTTGTGTTTAGAATGGCTCCTGGGAATGGAAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp AACGTATTGGTAAATCTGCTGCTCTGCACAGGTGTTTaGGGACTACCAGCTCTGCTCCAGCCTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NVLVNLLLCTGV*GLPALLQPFQK
Trigger: TTTCTGGAAAGGCTGGAGCAGAGCTGGTAGTCCCAAAACACCTGTGCAGAGCAGCAGATTTACCAATACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTTGGACATTTCCAGCTTaGTCAGGGGCCCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HHIQILKMVTALSLNVPGWTFPA*SGALVL
Trigger: AAGGACAAGGGCCCCTGATCAAGCTGGAAATGTCCA...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GGAACATCAAACAAGCTCTTCTTTAAGTGCTTCCGAAACAACCCCTCCCCCTCATTCCTCTTGTTCTTCTaGCAAGACTCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: GTSNKLFFKCFRNNPSPSFLLFF*QDSLMD
Trigger: GTCCATCAGCGAGTCTTGTCAGAAGAACAAGAGGAA...TGAGGGGGAGGGGTTGTTTCGGAAGCACTTAAAGAAGAGCTTGTTTGATGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTTTTCCATGTAGTCTCTaGAGTCCTGCGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HHIQILKMVTALSLNVPGFPCSL*SPASPP
Trigger: TGGGGGACTCGCAGGACTTCAGAGACTACATGGAAA...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTGACGTGGAAGCCGGCTaGGAGATAGGCGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCDVEAG*EIGGQG
Trigger: TCCCTGCCCGCCTATCTCCCAGCCGGCTTCCACGTC...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp AAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGATGCTTATAAACAGCACGGGCTCTGGGCTCGGTaGATGAAGAGTGTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: KPKIPVFLKAIHDAYKQHGLWAR*MKSVAD
Trigger: ATCCGCCACACTCTTCATCCACCGAGCCCAGAGCCC...GTGCTGTTTATAAGCATCATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GGAACATCAAACAAGCTCTTCTTTAAGTGCTTCCGAAACAACCCCTCCCCCTCAGAAGTGAAGTGCTGGTaGGTGAAGTTGACAATCGTG +
Preference number: 4 (lower is better)
Translates to: GTSNKLFFKCFRNNPSPSEVKCW*VKLTIV
Trigger: CACGATTGTCAACTTCACCCACCAGCACTTCACTTC...TGAGGGGGAGGGGTTGTTTCGGAAGCACTTAAAGAAGAGCTTGTTTGATGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCTGGGAAGTGAAGTGCTaGTGGGTGAAGTTGACAATC +
Preference number: 4 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSWEVKC*WVKLTI
Trigger: GATTGTCAACTTCACCCACCAGCACTTCACTTCCCA...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCATCTTCTCTGCAAGGATaGAGTCAGAGAGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: EANSLSMSKRAVETSSGPSSLQG*SQREAR
Trigger: TCTCGCCTCTCTCTGACTCCATCCTTGCAGAGAAGA...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTGACTCAGATACAAACTaGGTGAGGACACGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSDSDTN*VRTRTR
Trigger: CCTGGTGCGTGTCCTCACTCAGTTTGTATCTGAGTC...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp AAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGATGCTTATAAACAGCACATAGAAGGAGCCGTTTaGCCTGCTCTGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KPKIPVFLKAIHDAYKQHIEGAV*PALGVR
Trigger: CCGGACACCCAGAGCAGGGCAAACGGCTCCTTCTAT...GTGCTGTTTATAAGCATCATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp CATCACATACAAATCCTGAAGATGGTCACTGCATTGTCTCTGAATGTCCCAGGTCAATCGTGCCCACTTTaGTCTTCATCTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: HHIQILKMVTALSLNVPGQSCPL*SSSPSR
Trigger: ACGGGAAGGAGATGAAGAGCAAAGTGGGCACGATTG...ACCTGGGACATTCAGAGACAATGCAGTGACCATCTTCAGGATTTGTATGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCAAGTCTTCTGGGAGCTaGCATTCAGCAGGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVKSSGS*HSAGSS
Trigger: GGAACTTCCTGCTGAATGGCAGCTCCCAGAAGACTT...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCCACCTCCCTGGCCTCTaGGAAGGCAAACATCTTGAC +
Preference number: 4 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIAHLPGL*EGKHLD
Trigger: GTCAAGATGTTTGCCTTCCCAGAGGCCAGGGAGGTG...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp TACATGTTGCTCTTCTGGCCAAATATCCCACTGTATTaGAGTCTCTTAAGTCCAGCACACCTATCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YMLLFWPNIPLY*SLLSPAHLSPS
Trigger: GCTGGGGGATAGGTGTGCTGGACTTAAGAGACTCAAATACAGTGGGATATTTGGCCAGAAGAGCAACATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp TGTGTTGAGACAGGACCTCTGACTTGGACCTGGAACTaGCCAATTAGGCTGACTAGAAATGAAGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CVETGPLTWTWN*PIRLTRNEVSG
Trigger: ACCTGAGACTTCATTTCTAGTCAGCCTAATTGGCAAGTTCCAGGTCCAAGTCAGAGGTCCTGTCTCAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTAGGCTCCTCCTGTTCTaGGTGGATATTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSRLLLF*VDIVFP
Trigger: TGGGAAAACAATATCCACTCAGAACAGGAGGAGCCT...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp AAATGTCACATTTGGCTAAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGACAGATCCATCTTCTTaGACCCCCACGACCTTGACG +
Preference number: 4 (lower is better)
Translates to: KCHIWLSQKSLSFSRLFMTDPSS*TPTTLT
Trigger: CGTCAAGGTCGTGGGGGTTCAAGAAGATGGATCTGT...CATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTTAGCCAAATGTGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCGCTCTATGGAATTGCTaGGATGGCCTTTGTACTCCC +
Preference number: 4 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIAALWNC*DGLCTP
Trigger: GGGAGTACAAAGGCCATCTCAGCAATTCCATAGAGC...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTAGCCACACCCAGTCGTaGGAATGCGGGATGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCSHTQS*ECGMLP
Trigger: AGGCAACATCCCGCATTCTCACGACTGGGTGTGGCT...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTGTCTGGGTACCGTCCTaGTCAATCTCCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCVWVPS*SISSCT
Trigger: AGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGAC...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp AAATGTCACATTTGGCTAAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGACCTGGGAAGTGAAGTaGTGGTGGGTGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: KCHIWLSQKSLSFSRLFMTWEVK*WWVKLT
Trigger: TGTCAACTTCACCCACCAGCACTTCACTTCCCAGGT...CATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTTAGCCAAATGTGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp AAATGTCACATTTGGCTAAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGCCCACAAAGGTCGTCTaGCTGATGAAGATCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KCHIWLSQKSLSFSRLFMPTKVV*LMKISE
Trigger: CTCTGAGATCTTCATCAGCCAGACGACCTTTGTGGG...CATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTTAGCCAAATGTGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCACAAAATCCAAGAACTaGCTATGGCTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIATKSKN*LWLPAV
Trigger: CACAGCAGGAAGCCATAGTCAGTTCTTGGATTTTGT...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTGTCCTGCCAGGATCCTaGCATTCTGTAACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCVLPGS*HSVTGQ
Trigger: TTGCCCAGTTACAGAATGGCAGGATCCTGGCAGGAC...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR TCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTTTTCTGTGTCCATGGTaGGAGGGACAATGCCCACAA +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCFLCPW*EGQCPQ
Trigger: TTGTGGGCATTGTCCCTCTCACCATGGACACAGAAA...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR GCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTCGTTATCTTCACACCTaGAGCCGCCTTGATTCGAAG +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCRYLHT*SRLDSK
Trigger: CTTCGAATCAAGGCGGCTGCAGGTGTGAAGATAACG...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp ATACATTGCATTGAGCACAGAGGACTTATATCCATATaGTGGTATTGGAGCCTTTCTTCCCTCAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: IHCIEHRGLISI*WYWSLSSLRTV
Trigger: TACAGTTCTGAGGGAAGAAAGGCTCCAATACCACAATATGGATATAAGTCCTCTGTGCTCAATGCAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp CCACCAAGCCATCTCTCCAGCCCCTCAGTCCTGTTTTaGTTTGTTTGTTTGTTTGTTTGTTTGTTTGAATTA +
Preference number: 4 (lower is better)
Translates to: PPSHLSSPSVLF*FVCLFVCLFEL
Trigger: TAATTCAAACAAACAAACAAACAAACAAACAAACAAAAACAGGACTGAGGGGCTGGAGAGATGGCTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
3UTR CAA 72 bp TGTGGCCAAGAGAGTAAAACAGAATCAATGCATGTATaGGCCGTATTCATGTCTGTAAGTAGAAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: CGQESKTESMHV*AVFMSVSRNFP
Trigger: TGGGAAGTTTCTACTTACAGACATGAATACGGCCAATACATGCATTGATTCTGTTTTACTCTCTTGGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CCA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTTCCTCCTGTTCTGAGTaGATATTGTTTTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCSSCSE*ILFSHL
Trigger: CAAATGGGAAAACAATATCCACTCAGAACAGGAGGA...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GCAGGGAAGAAAACCTCTGCAGGCTGTCTGCAGCGCCTCGACCTGTaGTCTCTGCGCAGCGGAGCGCGCTCAGCGCCAGCAGCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: AGKKTSAGCLQRLDL*SLRSGARSAPAAAR
Trigger: TCGGGCTGCTGCTGGCGCTGAGCGCGCTCCGCTGCGCAGAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp AGTGCGGAGCGGGTTCCCAGGGAGTGTTGGGAGGGAGCGCAACGCTaGGCGTCCCCGGGGTTGAGAAGGCAAGCAAGCTACCGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: SAERVPRECWEGAQR*ASPGLRRQASYRRG
Trigger: GCCTCTCCGGTAGCTTGCTTGCCTTCTCAACCCCGGGGACGCCCAGCGTTGCGCTCCCTCCCAACACTCCCTGGGAACCCGCTCCGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185104.2
CDS GCA 90 bp GGCTGGGAGATAGGCGGGCAGGGAAGAAAACCTCTGCAGGCTGTCTaGAGCGCCTCGACCTGTGCTCTTCCCAGGGGAGAGCACAGGGCC +
Preference number: 5 (lower is better)
Translates to: GWEIGGQGRKPLQAV*SASTCALPRGEHRA
Trigger: GGCCCTGTGCTCTCCCCTGGGAAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGCCCGCCTATCTCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185104.2
CDS CCA 90 bp TGGGTGTCCGGGTGGTGGCCCATGCAGGACAGGACAGCCGTGGTCTaGGTACCGTCCTGCTCAATCTCCTCCTGCACTGCCCACTGGTCC +
Preference number: 5 (lower is better)
Translates to: WVSGWWPMQDRTAVV*VPSCSISSCTAHWS
Trigger: GGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp TGGTGGCCCATGCAGGACAGGACAGCCGTGGTCTGGGTACCGTCCTaGTCAATCTCCTCCTGCACTGCCCACTGGTCCTCGTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: WWPMQDRTAVVWVPS*SISSCTAHWSSWLT
Trigger: GGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GCAGGGAAGAAAACCTCTGCAGGCTGTCTGCAGCGCCTCGACCTGTaGTCTTCCCAGGGGAGAGCACAGGGCCGCCAAGGCCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGKKTSAGCLQRLDL*SSQGRAQGRQGLWR
Trigger: TCTCCACAGGCCTTGGCGGCCCTGTGCTCTCCCCTGGGAAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185104.2
CDS CCA 90 bp TGCTCTGGGTGTCCGGGTGGTGGCCCATGCAGGACAGGACAGCCGTaGTCTGGGTACCGTCCTGCTCAATCTCCTCCTGCACTGCCCACT +
Preference number: 5 (lower is better)
Translates to: CSGCPGGGPCRTGQP*SGYRPAQSPPALPT
Trigger: AGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACACCCAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GACAGGACAGCCGTGGTCTGGGTACCGTCCTGCTCAATCTCCTCCTaGACTGCCCACTGGTCCTCGTGGCTCACCCGCACAGCCGTTATC +
Preference number: 5 (lower is better)
Translates to: DRTAVVWVPSCSISS*TAHWSSWLTRTAVI
Trigger: GATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp AGAAGGAGCCGTTTGCCCTGCTCTGGGTGTCCGGGTGGTGGCCCATaGAGGACAGGACAGCCGTGGTCTGGGTACCGTCCTGCTCAATCT +
Preference number: 5 (lower is better)
Translates to: RRSRLPCSGCPGGGP*RTGQPWSGYRPAQS
Trigger: AGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACACCCAGAGCAGGGCAAACGGCTCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GACAGCCGTGGTCTGGGTACCGTCCTGCTCAATCTCCTCCTGCACTaGCCACTGGTCCTCGTGGCTCACCCGCACAGCCGTTATCTTCAC +
Preference number: 5 (lower is better)
Translates to: DSRGLGTVLLNLLLH*PLVLVAHPHSRYLH
Trigger: GTGAAGATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp GTACCGTCCTGCTCAATCTCCTCCTGCACTGCCCACTGGTCCTCGTaGCTCACCCGCACAGCCGTTATCTTCACACCTGCAGCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: VPSCSISSCTAHWSS*LTRTAVIFTPAAAL
Trigger: CAAGGCGGCTGCAGGTGTGAAGATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp GTGGTCTGGGTACCGTCCTGCTCAATCTCCTCCTGCACTGCCCACTaGTCCTCGTGGCTCACCCGCACAGCCGTTATCTTCACACCTGCA +
Preference number: 5 (lower is better)
Translates to: VVWVPSCSISSCTAH*SSWLTRTAVIFTPA
Trigger: TGCAGGTGTGAAGATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp CCACTGGTCCTCGTGGCTCACCCGCACAGCCGTTATCTTCACACCTaGAGCCGCCTTGATTCGAAGAGTGAACTTCTCTGCCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PLVLVAHPHSRYLHT*SRLDSKSELLCQGA
Trigger: GGCTCCCTGGCAGAGAAGTTCACTCTTCGAATCAAGGCGGCTGCAGGTGTGAAGATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp CCAACCGGTGTGCCGTGTTGGAACCACTCCTGGGCTGCTCGCTCCTaGCTTCCCTCGCGCTCTATGGAATTGCTGAGATGGCCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: PTGVPCWNHSWAARS*LPSRSMELLRWPLY
Trigger: GTACAAAGGCCATCTCAGCAATTCCATAGAGCGCGAGGGAAGCCAGGAGCGAGCAGCCCAGGAGTGGTTCCAACACGGCACACCGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp CTTGAGGAAGAAAGCCTCTTCTGCATCGGTGACGTGGAAGCCGGCTaGGAGATAGGCGGGCAGGGAAGAAAACCTCTGCAGGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LEEESLFCIGDVEAG*EIGGQGRKPLQAVC
Trigger: GCAGACAGCCTGCAGAGGTTTTCTTCCCTGCCCGCCTATCTCCCAGCCGGCTTCCACGTCACCGATGCAGAAGAGGCTTTCTTCCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031446.7
ENSMUST00000185104.2
CDS-3UTR CAA 90 bp GGGAGACTCCTCACTGATGGGCACAGCTTCAGTGTGGTCCCACTATTGGAAAGCGCCTGCAGGCTGGCATaGCGCATGAGGTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GRLLTDGHSFSVVPLLESACRLA*RMRSWL
Trigger: CAACCAGGACCTCATGCGCAATGCCAGCCTGCAGGC...GCTTTCCAATAGTGGGACCACACTGAAGCTGTGCCCATCAGTGAGGAGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 90 bp CTGCCAATCAGGGCCCAGCATGTAGGTCAGCTGACCCAGGTCAGGTaGCTCAGATACAAACTGAGTGAGGACACGCACCAGGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: LPIRAQHVGQLTQVR*LRYKLSEDTHQGML
Trigger: CAGCATGCCCTGGTGCGTGTCCTCACTCAGTTTGTATCTGAGTCACCTGACCTGGGTCAGCTGACCTACATGCTGGGCCCTGATTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp CTCCTCCTCCAGTGGGCACTGGCCAGCCTCGTTGGCTGGATAAAGTaGAAAGTAGAGTTCCATGGCTGTGCCACCCAGCAATGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LLLQWALASLVGWIK*KVEFHGCATQQCWD
Trigger: ATCCCAGCATTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGTGCCCACTGGAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GGCAGGCGGGGCACCCAGACAGTGATCTCCACCTGGGAAGTGAAGTaGTGGTGGGTGAAGTTGACAATCGTGCCCACTTTGCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: GRRGTQTVISTWEVK*WWVKLTIVPTLLFI
Trigger: GATGAAGAGCAAAGTGGGCACGATTGTCAACTTCACCCACCAGCACTTCACTTCCCAGGTGGAGATCACTGTCTGGGTGCCCCGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp CCATTTGCCCTCCTCCTCCAGTGGGCACTGGCCAGCCTCGTTGGCTaGATAAAGTGCAAAGTAGAGTTCCATGGCTGTGCCACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: PFALLLQWALASLVG*IKCKVEFHGCATQQ
Trigger: TTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGTGCCCACTGGAGGAGGAGGGCAAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 90 bp GATCCTTTCCCGAGCAGGGAGCACTGGCTGAGGCTCCTCCTGTTCTaGGTGGATATTGTTTTCCCATTTGCCCTCCTCCTCCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: DPFPSREHWLRLLLF*VDIVFPFALLLQWA
Trigger: TGCCCACTGGAGGAGGAGGGCAAATGGGAAAACAATATCCACTCAGAACAGGAGGAGCCTCAGCCAGTGCTCCCTGCTCGGGAAAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp TTTCCCATTTGCCCTCCTCCTCCAGTGGGCACTGGCCAGCCTCGTTaGCTGGATAAAGTGCAAAGTAGAGTTCCATGGCTGTGCCACCCA +
Preference number: 5 (lower is better)
Translates to: FPICPPPPVGTGQPR*LDKVQSRVPWLCHP
Trigger: TGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGTGCCCACTGGAGGAGGAGGGCAAATGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCATCGAGGATATGGGATTaGAGCCTCCAGTTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPSRIWD*SLQLKG
Trigger: CCCTTTCAACTGGAGGCTCAAATCCCATATCCTCGA...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCAATATTGTTTTCCCATTaGCCCTCCTCCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPILFSH*PSSSSG
Trigger: CCCACTGGAGGAGGAGGGCAAATGGGAAAACAATAT...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GTCGTGTCTACCGCCAGGCTGCTGTCTCTGAATGTCTCCCATCCCCAGGAGCCAGTAACTGGGCAATTTTaGGCTCCTCCACCTTCACAA +
Preference number: 5 (lower is better)
Translates to: VVSTARLLSLNVSHPQEPVTGQF*APPPSQ
Trigger: TTGTGAAGGTGGAGGAGCCAAAAATTGCCCAGTTAC...TGGCTCCTGGGGATGGGAGACATTCAGAGACAGCAGCCTGGCGGTAGACACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp GAGACGAAGAGCTCACTCATGGAGTCTTCCACAGGATATTCTACCTaGCAGGTGATTTGCTGGGCCCCAGCAAGGCTGCTGCTGTTATCG +
Preference number: 5 (lower is better)
Translates to: ETKSSLMESSTGYST*QVICWAPARLLLLS
Trigger: CGATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCCATGAGTGAGCTCTTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 90 bp AGAGCTCACTCATGGAGTCTTCCACAGGATATTCTACCTGCCAGGTaGTTTGCTGGGCCCCAGCAAGGCTGCTGCTGTTATCGACTCCAA +
Preference number: 5 (lower is better)
Translates to: RAHSWSLPQDILPAR*FAGPQQGCCCYRLQ
Trigger: TTGGAGTCGATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCCATGAGTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp CAGCCTCGTTGGCTGGATAAAGTGCAAAGTAGAGTTCCATGGCTGTaGCACCCAGCAATGCTGGGATCTCCTCTTGAGGTTCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: QPRWLDKVQSRVPWL*HPAMLGSPLEVQGP
Trigger: TGGACCTTGAACCTCAAGAGGAGATCCCAGCATTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp ACTGGCCAGCCTCGTTGGCTGGATAAAGTGCAAAGTAGAGTTCCATaGCTGTGCCACCCAGCAATGCTGGGATCTCCTCTTGAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: TGQPRWLDKVQSRVP*LCHPAMLGSPLEVQ
Trigger: TTGAACCTCAAGAGGAGATCCCAGCATTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AGTCCTTTCATGTGGCACCTACCTCCAAAGTCCCTATACCTTAACCCCAAAAGCTTCCTGCTGTGGGGCTaGGAGAACGTCCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPFMWHLPPKSLYLNPKSFLLWG*ENVLSS
Trigger: GCTGCTCAGGACGTTCTCCAAGCCCCACAGCAGGAA...GCTTTTGGGGTTAAGGTATAGGGACTTTGGAGGTAGGTGCCACATGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTACCTCGGCAACCACGATaGGCCATCTGGTCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PPHRFELRPRAMSVHCALPRQPR*AIWSEG
Trigger: ACCTTCAGACCAGATGGCCAATCGTGGTTGCCGAGG...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 90 bp TTGTACTCCCGGTTTATGCCACCGATGTCATTGCTGCCTCCTTGCTaGTCGTGCATCCCAGGTTCAAACCTCACCTTGACGTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LYSRFMPPMSLLPPC*SCIPGSNLTLTFPL
Trigger: CAAAGGAAACGTCAAGGTGAGGTTTGAACCTGGGATGCACGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCATAAACCGGGAGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp CCACCACATAGATTTGAACTCAGGCCACGCGCAATGAGTGTCCACTGTGCTTTATCCTGGTTGGCCTCCTaGAGGAAGAAAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PPHRFELRPRAMSVHCALSWLAS*RKKASS
Trigger: AGAAGAGGCTTTCTTCCTCAAGGAGGCCAACCAGGA...TAAAGCACAGTGGACACTCATTGCGCGTGGCCTGAGTTCAAATCTATGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp TGGTATTGGAGCCTTTCTTCCCTCAGAACTGTACCCCCAGGAGATTCACAAACATGCTGGTGGGTGAAGTaGACAATCGTGCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: WYWSLSSLRTVPPGDSQTCWWVK*TIVPTL
Trigger: CAAAGTGGGCACGATTGTCAACTTCACCCACCAGCA...TGTTTGTGAATCTCCTGGGGGTACAGTTCTGAGGGAAGAAAGGCTCCAATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTCTTGATCAGGGGCCCTaGTCCTTCACCCTCGGCAAC +
Preference number: 5 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSLDQGP*SFTLGN
Trigger: GTTGCCGAGGGTGAAGGACAAGGGCCCCTGATCAAG...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp TGGTATTGGAGCCTTTCTTCCCTCAGAACTGTACCCCCAGGAGATTCACAAACAGCAAAGGCCACGCAGTaGATCAGGAAGACCAAGATG +
Preference number: 5 (lower is better)
Translates to: WYWSLSSLRTVPPGDSQTAKATQ*IRKTKM
Trigger: CATCTTGGTCTTCCTGATCAACTGCGTGGCCTTTGC...TGTTTGTGAATCTCCTGGGGGTACAGTTCTGAGGGAAGAAAGGCTCCAATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCCGCATGAGGTCCTGGTaGGCCTCCTTGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVRMRSW*ASLRKK
Trigger: TTTCTTCCTCAAGGAGGCCAACCAGGACCTCATGCG...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AAGATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCGGGAAGGCAAACATCTaGACACACGGAAGATCATCC +
Preference number: 5 (lower is better)
Translates to: KIGFRKHCLWSLLGTGRLGKANI*THGRSS
Trigger: GGATGATCTTCCGTGTGTCAAGATGTTTGCCTTCCC...GAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GTACCTTCCATTCCCAGGAGCCATTCTAAACACAAAAGCAAGCGAACATACTTCACCTTGACGTTTCCTTaGCCCACGGCAAGGGTACTC +
Preference number: 5 (lower is better)
Translates to: VPSIPRSHSKHKSKRTYFTLTFP*PTARVL
Trigger: GAGTACCCTTGCCGTGGGCAAAGGAAACGTCAAGGT...GAAGTATGTTCGCTTGCTTTTGTGTTTAGAATGGCTCCTGGGAATGGAAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GCCGTATTCATGTCTGTAAGTAGAAACTTCCCATCTAGATGGTTAAGAATTGCCATGCGGGATGTTGCCTaGCTCGCTCACCGCGAACCT +
Preference number: 5 (lower is better)
Translates to: AVFMSVSRNFPSRWLRIAMRDVA*LAHREP
Trigger: AGGTTCGCGGTGAGCGAGCAAGGCAACATCCCGCAT...GGCAATTCTTAACCATCTAGATGGGAAGTTTCTACTTACAGACATGAATACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 90 bp GTCTGCACTTTAGGTCTGTTGGAAAAGATGGAGCTGTCGAGGATATaGGATTTGAGCCTCCAGTTGAAAGGGAACCTCTCCATATTTCCG +
Preference number: 5 (lower is better)
Translates to: VCTLGLLEKMELSRI*DLSLQLKGNLSIFP
Trigger: CGGAAATATGGAGAGGTTCCCTTTCAACTGGAGGCTCAAATCCCATATCCTCGACAGCTCCATCTTTTCCAACAGACCTAAAGTGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGATGCTTATAAACAGCACCATAGAAGGAGCCGTTaGCCCTGCTCTGGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: KPKIPVFLKAIHDAYKQHHRRSR*PCSGCP
Trigger: CGGACACCCAGAGCAGGGCAAACGGCTCCTTCTATG...GTGCTGTTTATAAGCATCATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp TCAAAATGTTCTGGAAGATTCCATCGACAATCCCAGCATGAGAGCCACAATGTCACAATCGTGCCCACTTaGCTCTTCATCTCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SKCSGRFHRQSQHESHNVTIVPT*LFISFP
Trigger: CGGGAAGGAGATGAAGAGCAAAGTGGGCACGATTGT...GACATTGTGGCTCTCATGCTGGGATTGTCGATGGAATCTTCCAGAACATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AAGATAGGATTCAGAAAACACTGTCTATGGTCACTGCTGGGGACTGGGAGACTCAACTCGGTTACCAGGTaGGTGATGTCAAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: KIGFRKHCLWSLLGTGRLNSVTR*VMSNCQ
Trigger: TTGGCAGTTTGACATCACCAACCTGGTAACCGAGTT...GAGTCTCCCAGTCCCCAGCAGTGACCATAGACAGTGTTTTCTGAATCCTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GAAGCTAATTCACTGAGTATGTCTAAGAGGGCAGTGGAGACATCTTCAGGACCATCGCGCTCTATGGAATaGCTGAGATGGCCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: EANSLSMSKRAVETSSGPSRSME*LRWPLY
Trigger: GTACAAAGGCCATCTCAGCAATTCCATAGAGCGCGA...TGGTCCTGAAGATGTCTCCACTGCCCTCTTAGACATACTCAGTGAATTAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp GGAACATCAAACAAGCTCTTCTTTAAGTGCTTCCGAAACAACCCCTCCCCCTCAGACTCCAAAGTCCACTaGCAGAATCTCATAGAAGGA +
Preference number: 5 (lower is better)
Translates to: GTSNKLFFKCFRNNPSPSDSKVH*QNLIEG
Trigger: TCCTTCTATGAGATTCTGCAAGTGGACTTTGGAGTC...TGAGGGGGAGGGGTTGTTTCGGAAGCACTTAAAGAAGAGCTTGTTTGATGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGATGCTTATAAACAGCACATGCCACCGATGTCATaGCTGCCTCCTTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: KPKIPVFLKAIHDAYKQHMPPMS*LPPCCS
Trigger: CGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCAT...GTGCTGTTTATAAGCATCATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTGCATCTGCTCCCGCTTaGAGGAGTTTTCCTCCCATT +
Preference number: 5 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSASAPA*RSFPPI
Trigger: AATGGGAGGAAAACTCCTCAAAGCGGGAGCAGATGC...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp AAATGTCACATTTGGCTAAGCCAAAAATCCCTGTCTTTCTCAAGGCTATTCATGGGTTCAAACCTCACCTaGACGTTTCCTTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: KCHIWLSQKSLSFSRLFMGSNLT*TFPLPT
Trigger: CGTGGGCAAAGGAAACGTCAAGGTGAGGTTTGAACC...CATGAATAGCCTTGAGAAAGACAGGGATTTTTGGCTTAGCCAAATGTGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp CATATGTCAGCCAAGTTCATGCAATGCCTGTATGTTCCAGCTTCCTTCTTTAGTTGTTCTGAGTGGATATaGTTTTCCCATTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HMSAKFMQCLYVPASFFSCSEWI*FSHLPS
Trigger: GGAGGGCAAATGGGAAAACAATATCCACTCAGAACA...ACTAAAGAAGGAAGCTGGAACATACAGGCATTGCATGAACTTGGCTGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS-3UTR CAA 90 bp TCATCTGCAAAGTGGAGAGTTTCATACAAAGCTATCTCTTCATATCTTTGTTGTTGCACTTTAGGTCTGTaGGAAAAGATGGAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SSAKWRVSYKAISSYLCCCTLGL*EKMELS
Trigger: CGACAGCTCCATCTTTTCCAACAGACCTAAAGTGCA...ACAACAAAGATATGAAGAGATAGCTTTGTATGAAACTCTCCACTTTGCAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp CGTTTGCCCTGCTCTGGGTGTCCGGGTGGTGGCCCATaGAGGACAGGACAGCCGTGGTCTGGGTACCGTCCT +
Preference number: 6 (lower is better)
Translates to: RLPCSGCPGGGP*RTGQPWSGYRP
Trigger: AGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACACCCAGAGCAGGGCAAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp TGGGCTCGGTGGATGAAGAGTGTGGCGGATCGGGCCTaGAGGCTGGCATTGCGCATGAGGTCCTGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: WARWMKSVADRA*RLALRMRSWLA
Trigger: GGCCAACCAGGACCTCATGCGCAATGCCAGCCTGCAGGCCCGATCCGCCACACTCTTCATCCACCGAGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031446.7
ENSMUST00000185104.2
CDS GCA 72 bp GCCGTGGTCTGGGTACCGTCCTGCTCAATCTCCTCCTaGACTGCCCACTGGTCCTCGTGGCTCACCCGCACA +
Preference number: 6 (lower is better)
Translates to: AVVWVPSCSISS*TAHWSSWLTRT
Trigger: TGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp AAAACCTCTGCAGGCTGTCTGCAGCGCCTCGACCTGTaGTCTTCCCAGGGGAGAGCACAGGGCCGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: KTSAGCLQRLDL*SSQGRAQGRQG
Trigger: GCCTTGGCGGCCCTGTGCTCTCCCCTGGGAAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185104.2
CDS CCA 72 bp GGGTGGTGGCCCATGCAGGACAGGACAGCCGTGGTCTaGGTACCGTCCTGCTCAATCTCCTCCTGCACTGCC +
Preference number: 6 (lower is better)
Translates to: GWWPMQDRTAVV*VPSCSISSCTA
Trigger: GGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp ATAGGCGGGCAGGGAAGAAAACCTCTGCAGGCTGTCTaGAGCGCCTCGACCTGTGCTCTCTGCGCAGCGGAG +
Preference number: 6 (lower is better)
Translates to: IGGQGRKPLQAV*SASTCALCAAE
Trigger: CTCCGCTGCGCAGAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGCCCGCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp TGTCCGGGTGGTGGCCCATGCAGGACAGGACAGCCGTaGTCTGGGTACCGTCCTGCTCAATCTCCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: CPGGGPCRTGQP*SGYRPAQSPPA
Trigger: TGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCATGGGCCACCACCCGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp ATGCAGGACAGGACAGCCGTGGTCTGGGTACCGTCCTaGTCAATCTCCTCCTGCACTGCCCACTGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: MQDRTAVVWVPS*SISSCTAHWSS
Trigger: CGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCAGGACGGTACCCAGACCACGGCTGTCCTGTCCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp ATAGGCGGGCAGGGAAGAAAACCTCTGCAGGCTGTCTaGAGCGCCTCGACCTGTGCTCTTCCCAGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: IGGQGRKPLQAV*SASTCALPRGE
Trigger: CTCTCCCCTGGGAAGAGCACAGGTCGAGGCGCTGCAGACAGCCTGCAGAGGTTTTCTTCCCTGCCCGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185104.2
CDS CCA 72 bp GTGCCGTGTTGGAACCACTCCTGGGCTGCTCGCTCCTaGCTTCCCTCGCGCTCTATGGAATTGCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: VPCWNHSWAARS*LPSRSMELLRW
Trigger: CCATCTCAGCAATTCCATAGAGCGCGAGGGAAGCCAGGAGCGAGCAGCCCAGGAGTGGTTCCAACACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp CATGAGCAGGAAGTCCCAGGGCACCGTCTTCTCTACTaGGAAGGGACCGTAGCTGGCATTGATGGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: HEQEVPGHRLLY*EGTVAGIDGRR
Trigger: CCTCCGGCCATCAATGCCAGCTACGGTCCCTTCTCAGTAGAGAAGACGGTGCCCTGGGACTTCCTGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031446.7
ENSMUST00000185104.2
CDS CCA 72 bp GAAAGCCTCTTCTGCATCGGTGACGTGGAAGCCGGCTaGGAGATAGGCGGGCAGGGAAGAAAACCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: ESLFCIGDVEAG*EIGGQGRKPLQ
Trigger: CTGCAGAGGTTTTCTTCCCTGCCCGCCTATCTCCCAGCCGGCTTCCACGTCACCGATGCAGAAGAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031446.7
ENSMUST00000185104.2
CDS CCA 72 bp TGCTCAATCTCCTCCTGCACTGCCCACTGGTCCTCGTaGCTCACCCGCACAGCCGTTATCTTCACACCTGCA +
Preference number: 6 (lower is better)
Translates to: CSISSCTAHWSS*LTRTAVIFTPA
Trigger: TGCAGGTGTGAAGATAACGGCTGTGCGGGTGAGCCACGAGGACCAGTGGGCAGTGCAGGAGGAGATTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp GTGTCCCCTTCTCGGATGAGGTTCAGAGGGATCGAAAGGGCCACATaGTCATCGAGGGTCACCAAGGACCACCGCAGGTCATCCTGGGTA +
Preference number: 6 (lower is better)
Translates to: VSPSRMRFRGIERAT*SSRVTKDHRRSSWV
Trigger: TACCCAGGATGACCTGCGGTGGTCCTTGGTGACCCTCGATGACAATGTGGCCCTTTCGATCCCTCTGAACCTCATCCGAGAAGGGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp AGGTCACCGGGGTTACTGGATTCTGGTAACTTCCCTTaGGTGGGGAAGCTGGTGAAGGCATCTGCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: RSPGLLDSGNFP*VGKLVKASAPA
Trigger: AGCGGGAGCAGATGCCTTCACCAGCTTCCCCACCCAAGGGAAGTTACCAGAATCCAGTAACCCCGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp CTGGGCCCCAGCAAGGCTGCTGCTGTTATCGACTCCAAAGTCCACTaGCAGAATCTCATAGAAGGAGCCGTTTGCCCTGCTCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: LGPSKAAAVIDSKVH*QNLIEGAVCPALGV
Trigger: GACACCCAGAGCAGGGCAAACGGCTCCTTCTATGAGATTCTGCAAGTGGACTTTGGAGTCGATAACAGCAGCAGCCTTGCTGGGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp ACGCTGCCGATCCTTTCCCGAGCAGGGAGCACTGGCTaGGGCTCCTCCTGTTCTGAGTGGATATTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: TLPILSRAGSTG*GSSCSEWILFS
Trigger: GGAAAACAATATCCACTCAGAACAGGAGGAGCCTCAGCCAGTGCTCCCTGCTCGGGAAAGGATCGGCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp ACAGACTCCAACACATCCACCACAGATCCATCTTCTTaGACCCCCACGACCTTGACGGGAACCGAGACGGGC +
Preference number: 6 (lower is better)
Translates to: TDSNTSTTDPSS*TPTTLTGTETG
Trigger: GCCCGTCTCGGTTCCCGTCAAGGTCGTGGGGGTTCAAGAAGATGGATCTGTGGTGGATGTGTTGGAGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp CAGTGGGCACTGGCCAGCCTCGTTGGCTGGATAAAGTaGAAAGTAGAGTTCCATGGCTGTGCCACCCAGCAA +
Preference number: 6 (lower is better)
Translates to: QWALASLVGWIK*KVEFHGCATQQ
Trigger: TTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCACTTTATCCAGCCAACGAGGCTGGCCAGTGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp ACCCGCACAGCCGTTATCTTCACACCTGCAGCCGCCTaGATTCGAAGAGTGAACTTCTCTGCCAGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: TRTAVIFTPAAA*IRRVNFSAREP
Trigger: TGGCTCCCTGGCAGAGAAGTTCACTCTTCGAATCAAGGCGGCTGCAGGTGTGAAGATAACGGCTGTGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp CTCGCTGATGGACATTTCCAGCTTGATCAGGGGCCCTaGTCCTTCACCCTCGGCAACCACGATTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: LADGHFQLDQGP*SFTLGNHDWPS
Trigger: AGATGGCCAATCGTGGTTGCCGAGGGTGAAGGACAAGGGCCCCTGATCAAGCTGGAAATGTCCATCAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp CTGACAAGACTCGCTGATGGACATTTCCAGCTTGATCAGGGGCCCTaGTCCTTCACCCTCGGCAACCACGATTGGCCATCTGGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LTRLADGHFQLDQGP*SFTLGNHDWPSGLK
Trigger: CTTCAGACCAGATGGCCAATCGTGGTTGCCGAGGGTGAAGGACAAGGGCCCCTGATCAAGCTGGAAATGTCCATCAGCGAGTCTTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp CTTGCTGCTCGTGCATCCCAGGTTCAAACCTCACCTTaGCGTTTCCTTTGCCCACGGCAAGGGTACTCTTCC +
Preference number: 6 (lower is better)
Translates to: LAARASQVQTSP*RFLCPRQGYSS
Trigger: GGAAGAGTACCCTTGCCGTGGGCAAAGGAAACGTCAAGGTGAGGTTTGAACCTGGGATGCACGAGCAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp AGCTCACTCATGGAGTCTTCCACAGGATATTCTACCTaGCAGGTGATTTGCTGGGCCCCAGCAAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSLMESSTGYST*QVICWAPARLL
Trigger: CAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCCATGAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS GCA 72 bp GGCACCCAGACAGTGATCTCCACCTGGGAAGTGAAGTaGTGGTGGGTGAAGTTGACAATCGTGCCCACTTTG +
Preference number: 6 (lower is better)
Translates to: GTQTVISTWEVK*WWVKLTIVPTL
Trigger: CAAAGTGGGCACGATTGTCAACTTCACCCACCAGCACTTCACTTCCCAGGTGGAGATCACTGTCTGGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp GGAGTCTTCCACAGGATATTCTACCTGCCAGGTGATTaGCTGGGCCCCAGCAAGGCTGCTGCTGTTATCGAC +
Preference number: 6 (lower is better)
Translates to: GVFHRIFYLPGD*LGPSKAAAVID
Trigger: GTCGATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp CCTTGCTGCTCGTGCATCCCAGGTTCAAACCTCACCTaGACGTTTCCTTTGCCCACGGCAAGGGTACTCTTC +
Preference number: 6 (lower is better)
Translates to: PCCSCIPGSNLT*TFPLPTARVLF
Trigger: GAAGAGTACCCTTGCCGTGGGCAAAGGAAACGTCAAGGTGAGGTTTGAACCTGGGATGCACGAGCAGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp TGGCCTTTGTACTCCCGGTTTATGCCACCGATGTCATaGCTGCCTCCTTGCTGCTCGTGCATCCCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: WPLYSRFMPPMS*LPPCCSCIPGS
Trigger: TGAACCTGGGATGCACGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCATAAACCGGGAGTACAAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp TTGCTGAGATGGCCTTTGTACTCCCGGTTTATGCCACCGATGTCATaGCTGCCTCCTTGCTGCTCGTGCATCCCAGGTTCAAACCTCACC +
Preference number: 6 (lower is better)
Translates to: LLRWPLYSRFMPPMS*LPPCCSCIPGSNLT
Trigger: GGTGAGGTTTGAACCTGGGATGCACGAGCAGCAAGGAGGCAGCAATGACATCGGTGGCATAAACCGGGAGTACAAAGGCCATCTCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp AAGGGAACCTCTCCATATTTCCGAAAGGAGTGGGCATaGGCAGGAAGTCCCAGGGCACCGTCTTCTCTACTG +
Preference number: 6 (lower is better)
Translates to: KGTSPYFRKEWA*AGSPRAPSSLL
Trigger: CAGTAGAGAAGACGGTGCCCTGGGACTTCCTGCTCATGCCCACTCCTTTCGGAAATATGGAGAGGTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031446.7
ENSMUST00000185104.2
CDS GCA 72 bp TGCAAAGTAGAGTTCCATGGCTGTGCCACCCAGCAATaGTGGGATCTCCTCTTGAGGTTCAAGGTCCAGACC +
Preference number: 6 (lower is better)
Translates to: CKVEFHGCATQQ*WDLLLRFKVQT
Trigger: GGTCTGGACCTTGAACCTCAAGAGGAGATCCCAGCATTGCTGGGTGGCACAGCCATGGAACTCTACTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp ACCCAGACAGTGATCTCCACCTGGGAAGTGAAGTGCTaGTGGGTGAAGTTGACAATCGTGCCCACTTTGCTC +
Preference number: 6 (lower is better)
Translates to: TQTVISTWEVKC*WVKLTIVPTLL
Trigger: GAGCAAAGTGGGCACGATTGTCAACTTCACCCACCAGCACTTCACTTCCCAGGTGGAGATCACTGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp GAACAAAATCCAAGAACTGACTATGGCTTCCTGCTGTaGGGCTTGGAGAACGTCCTGAGCAGCCACCGTGGA +
Preference number: 6 (lower is better)
Translates to: EQNPRTDYGFLL*GLENVLSSHRG
Trigger: TCCACGGTGGCTGCTCAGGACGTTCTCCAAGCCCCACAGCAGGAAGCCATAGTCAGTTCTTGGATTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp CTCACTCATGGAGTCTTCCACAGGATATTCTACCTGCCAGGTGATTaGCTGGGCCCCAGCAAGGCTGCTGCTGTTATCGACTCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LTHGVFHRIFYLPGD*LGPSKAAAVIDSKV
Trigger: GACTTTGGAGTCGATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCCATGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp GAGAAACCAAAAAGGTGGCCGTGTCCCCTTCTCGGATaGGGTTCAGAGGGATCGAAAGGGCCACATTGTCAT +
Preference number: 6 (lower is better)
Translates to: EKPKRWPCPLLG*GSEGSKGPHCH
Trigger: ATGACAATGTGGCCCTTTCGATCCCTCTGAACCTCATCCGAGAAGGGGACACGGCCACCTTTTTGGTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS TCA 72 bp TCATGGAGTCTTCCACAGGATATTCTACCTGCCAGGTaGTTTGCTGGGCCCCAGCAAGGCTGCTGCTGTTAT +
Preference number: 6 (lower is better)
Translates to: SWSLPQDILPAR*FAGPQQGCCCY
Trigger: ATAACAGCAGCAGCCTTGCTGGGGCCCAGCAAATCACCTGGCAGGTAGAATATCCTGTGGAAGACTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp TCCATGGTGAGAGGGACAATGCCCACAAAGGTCGTCTaGCTGATGAAGATCTCAGAGACGAAGAGCTCACTC +
Preference number: 6 (lower is better)
Translates to: SMVRGTMPTKVV*LMKISETKSSL
Trigger: GAGTGAGCTCTTCGTCTCTGAGATCTTCATCAGCCAGACGACCTTTGTGGGCATTGTCCCTCTCACCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp CAGACAGTGATCTCCACCTGGGAAGTGAAGTGCTGGTaGGTGAAGTTGACAATCGTGCCCACTTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: QTVISTWEVKCW*VKLTIVPTLLF
Trigger: GAAGAGCAAAGTGGGCACGATTGTCAACTTCACCCACCAGCACTTCACTTCCCAGGTGGAGATCACTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp CTTCCCTCGCGCTCTATGGAATTGCTGAGATGGCCTTaGTACTCCCGGTTTATGCCACCGATGTCATTGCTG +
Preference number: 6 (lower is better)
Translates to: LPSRSMELLRWP*YSRFMPPMSLL
Trigger: CAGCAATGACATCGGTGGCATAAACCGGGAGTACAAAGGCCATCTCAGCAATTCCATAGAGCGCGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp AGCAAGGCTGCTGCTGTTATCGACTCCAAAGTCCACTaGCAGAATCTCATAGAAGGAGCCGTTTGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: SKAAAVIDSKVH*QNLIEGAVCPA
Trigger: AGCAGGGCAAACGGCTCCTTCTATGAGATTCTGCAAGTGGACTTTGGAGTCGATAACAGCAGCAGCCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp CTGCCAGGATCCTGCCATTCTGTAACTGGGCAATTTTaGGCTCCTCCACCTTCACAAACTCGGTTACCAGGT +
Preference number: 6 (lower is better)
Translates to: LPGSCHSVTGQF*APPPSQTRLPG
Trigger: ACCTGGTAACCGAGTTTGTGAAGGTGGAGGAGCCAAAAATTGCCCAGTTACAGAATGGCAGGATCCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CCA 72 bp TTAGGTCTGTTGGAAAAGATGGAGCTGTCGAGGATATaGGATTTGAGCCTCCAGTTGAAAGGGAACCTCTCC +
Preference number: 6 (lower is better)
Translates to: LGLLEKMELSRI*DLSLQLKGNLS
Trigger: GGAGAGGTTCCCTTTCAACTGGAGGCTCAAATCCCATATCCTCGACAGCTCCATCTTTTCCAACAGACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp CTTTTGTGCCTATACTTCCAAGCAAAGGCCACGCAGTaGATCAGGAAGACCAAGATGGCCAAGCAGAAGACA +
Preference number: 6 (lower is better)
Translates to: LLCLYFQAKATQ*IRKTKMAKQKT
Trigger: TGTCTTCTGCTTGGCCATCTTGGTCTTCCTGATCAACTGCGTGGCCTTTGCTTGGAAGTATAGGCACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 72 bp ATCTCCTTCCCGTTCACAAAGATAGAATCACAGGTGTaGGAGACCTTCACAACATCTTCATCGGCAGACCTG +
Preference number: 6 (lower is better)
Translates to: ISFPFTKIESQV*ETFTTSSSADL
Trigger: CAGGTCTGCCGATGAAGATGTTGTGAAGGTCTCCAACACCTGTGATTCTATCTTTGTGAACGGGAAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7
CDS CAA 90 bp ACTTTAGGTCTGTTGGAAAAGATGGAGCTGTCGAGGATATGGGATTaGAGCCTCCAGTTGAAAGGGAACCTCTCCATATTTCCGAAAGGA +
Preference number: 6 (lower is better)
Translates to: TLGLLEKMELSRIWD*SLQLKGNLSIFPKG
Trigger: TCCTTTCGGAAATATGGAGAGGTTCCCTTTCAACTGGAGGCTCAAATCCCATATCCTCGACAGCTCCATCTTTTCCAACAGACCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031446.7