Pregenerated sensors for TMEM130 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043388Ensembl transcript IDs: ENSMUST00000061446.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAAAGGACAGAGGGCAAGGGAGGCCAGGCTCGGGTGCCACCTTTaGGGTCTAGTTCAAATCCATCCCAGCAACAAGCCTTCCAGATAC | + |
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Preference number: 1 (lower is better) Translates to: DKGQRAREARLGCHL*GLVQIHPSNKPSRY Trigger: GTATCTGGAAGGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTGGCCTCCCTTGCCCTCTGTCCTTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR GCA 90 bp | CATCCCAGCAACAAGCCTTCCAGATACGCAGCAAATCATCTCAGGTaGTCCATCACCTCCACGTGTGCCCTTCCTTGCTGTAATCGAGCC | + |
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Preference number: 1 (lower is better) Translates to: HPSNKPSRYAANHLR*SITSTCALPCCNRA Trigger: GGCTCGATTACAGCAAGGAAGGGCACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAGGCTTGTTGCTGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR GCA 90 bp | AGCAGGCTGACCTTGAACTCTGATCTGATATCTACCGGCCTTTGCTaGCCGAGTGCTGAGGTTAAAGGTGTGCACCACCATGCCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SRLTLNSDLISTGLC*PSAEVKGVHHHARL Trigger: AAGCCTGGCATGGTGGTGCACACCTTTAACCTCAGCACTCGGGCAGCAAAGGCCGGTAGATATCAGATCAGAGTTCAAGGTCAGCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 90 bp | CGAGTGCTGAGGTTAAAGGTGTGCACCACCATGCCAGGCTTCTCCTaGTCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RVLRLKVCTTMPGFS*SSFIIFQSIVCLLL Trigger: AAGCAGGAGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATGGTGGTGCACACCTTTAACCTCAGCACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 90 bp | TTGGTGGAGCCTTTATTCAAGAACAATGGTGGCATGTCATGGGAATaGACGGTACAAGAGACAATACTATTTCAGCAGGATATCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: LVEPLFKNNGGMSWE*TVQETILFQQDIQG Trigger: CCCTTGGATATCCTGCTGAAATAGTATTGTCTCTTGTACCGTTCATTCCCATGACATGCCACCATTGTTCTTGAATAAAGGCTCCACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTACCCTGGCATGCCGGGTACCAGGGGAAGCCTGGAAGCTTACAGCCACACCGAAGCTCCCGATGGGTaGTCGGTGAATACTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GYPGMPGTRGSLEAYSHTEAPDG*SVNTER Trigger: CCTCTCAGTATTCACCGATCACCCATCGGGAGCTTC...GGTGTGGCTGTAAGCTTCCAGGCTTCCCCTGGTACCCGGCATGCCAGGGTAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTACCCTGGCATGCCGGGTACCAGGGGAAGCCTGGAAGCTTACAGCCACACCCAAAGATCAGAATCCTaGTTGGTAGAGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GYPGMPGTRGSLEAYSHTQRSES*LVEGVG Trigger: CCCCACCCCCTCTACCAAGCAGGATTCTGATCTTTG...GGTGTGGCTGTAAGCTTCCAGGCTTCCCCTGGTACCCGGCATGCCAGGGTAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGATACGCAGCAAATCATCTCAGGTGCTCCATCACCTCCACGTGTGCCCGTACGGATGAGTAGATaGCAGTGGGGAGGCGACACA | + |
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Preference number: 2 (lower is better) Translates to: LPDTQQIISGAPSPPRVPVRMSR*QWGGDT Trigger: TGTGTCGCCTCCCCACTGTCATCTACTCATCCGTAC...GGGCACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTCCTCGTTCCTTCTGGCTTGGGCGGAGCTGCATTGCCAGGGACCTCAGTACGAATGATGTCAGCTaGACTGTACAGATCGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LLPRSFWLGRSCIARDLSTNDVS*TVQIGD Trigger: GTCACCGATCTGTACAGTCCAGCTGACATCATTCGT...ACTGAGGTCCCTGGCAATGCAGCTCCGCCCAAGCCAGAAGGAACGAGGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CAA 90 bp | AGACAAAGGACAGAGGGCAAGGGAGGCCAGGCTCGGGTGCCACCTTaGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCCTTCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: RQRTEGKGGQARVPP*RSSSNPSQQQAFQI Trigger: TATCTGGAAGGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTGGCCTCCCTTGCCCTCTGTCCTTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCGGGTGCCACCTTTGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCCACTAGACTGTACGGATaGGTAGATGACAGTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QARVPPLRSSSNPSQQQATRLYG*VDDSGE Trigger: CTCCCCACTGTCATCTACTCATCCGTACAGTCTAGT...GGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTGGGGGTGGGGGAGGGTaGCTGGGAACAGCTTACAGC | + |
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Preference number: 2 (lower is better) Translates to: HARLLLIIFYHLSKHRLPGGGGG*LGTAYS Trigger: GCTGTAAGCTGTTCCCAGTCACCCTCCCCCACCCCC...AGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CAA 90 bp | ACTTGGGAGAGTCTTAACACAACACACCAAAGATCAGAATCCTGCTaGGTAGAGGGGGTGGGGGAGGGTGACTGGGAACAGCTTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: TWESLNTTHQRSESC*VEGVGEGDWEQLTA Trigger: TGCTGTAAGCTGTTCCCAGTCACCCTCCCCCACCCCCTCTACCAAGCAGGATTCTGATCTTTGGTGTGTTGTGTTAAGACTCTCCCAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGCCCATCTATCTGATCGTGTTATCTTTCACTATCTGTCCTTAACCATCTGTTGGCTTGGGCGGAGCTaGATTGCCAGGGACCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: RAHLSDRVIFHYLSLTICWLGRS*IARDLS Trigger: ACTGAGGTCCCTGGCAATGCAGCTCCGCCCAAGCCA...ACAGATGGTTAAGGACAGATAGTGAAAGATAACACGATCAGATAGATGGGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTTTTTCCTCGGTGGACATTGAGCTTACAGATTTCAAGGAAAGAGGATCCAGTCCCCAGTGAGCAATaGGCAAGGGGCAGCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: LLFPRWTLSLQISRKEDPVPSEQ*ARGSQT Trigger: GGTCTGGCTGCCCCTTGCCCATTGCTCACTGGGGAC...TGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTTTTTCCTCGGTGGACATTGAGCTTACAGATTTCAAGGAAAGAGGATCCATCGTTCCTTCTGGCTTaGGCGGAGCTGCATTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLFPRWTLSLQISRKEDPSFLLA*AELHCQ Trigger: CTGGCAATGCAGCTCCGCCCAAGCCAGAAGGAACGA...TGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAAGGTGTGCACCACCATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTGGGTACAGAATGGCCTaGTCATGGGACTGTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: VKGVHHHARLLLIIFYHLGYRMA*SWDCRD Trigger: GTCTCTACAGTCCCATGACCAGGCCATTCTGTACCC...AAGATGATAAAAGATGATCAGGAGAAGCCTGGCATGGTGGTGCACACCTTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGTACGAGGCTGCTATCCCAAATCCTCTCTATCTCAACCTTTCTTTTATTTGGTCCTTAACCATCTGTaGCCTCCTTCCTCGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VVRGCYPKSSLSQPFFYLVLNHL*PPSSFL Trigger: AAGGAACGAGGAAGGAGGTCACAGATGGTTAAGGAC...CAAATAAAAGAAAGGTTGAGATAGAGAGGATTTGGGATAGCAGCCTCGTACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CCA 72 bp | GCATTGCCAGGGACCTCAGTAGTCCCCAGTGAGCAATaGGCAAGGGGCAGCCAGACCCACTTGGGAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: ALPGTSVVPSEQ*ARGSQTHLGES Trigger: AGACTCTCCCAAGTGGGTCTGGCTGCCCCTTGCCCATTGCTCACTGGGGACTACTGAGGTCCCTGGCAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CCA 72 bp | CAGGCTACCCTGGCATGCCGGGTACCAGGGGAAGCCTaGAAGCTTACAGCCACACCTACGTACCATGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QATLACRVPGEA*KLTATPTYHVS Trigger: GGAAACATGGTACGTAGGTGTGGCTGTAAGCTTCCAGGCTTCCCCTGGTACCCGGCATGCCAGGGTAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 72 bp | CAGAGGGCAAGGGAGGCCAGGCTCGGGTGCCACCTTTaGGGTCTAGTTCAAATCCATCCCAGCAACAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: QRAREARLGCHL*GLVQIHPSNKP Trigger: AGGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTGGCCTCCCTTGCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CCA 72 bp | TCCTTAACCATCTGTGACCTCCTTCCTCGTTCCTTCTaGCTTGGGCGGAGCTGCATTGCCAGGGACCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SLTICDLLPRSF*LGRSCIARDLS Trigger: ACTGAGGTCCCTGGCAATGCAGCTCCGCCCAAGCCAGAAGGAACGAGGAAGGAGGTCACAGATGGTTAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 72 bp | TGGGAACAGCTTACAGCACTGACTAGACTGTACGGATaGGTAGATGACAGTGGGGAGGCGACACAAAGGACG | + |
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Preference number: 3 (lower is better) Translates to: WEQLTALTRLYG*VDDSGEATQRT Trigger: CGTCCTTTGTGTCGCCTCCCCACTGTCATCTACTCATCCGTACAGTCTAGTCAGTGCTGTAAGCTGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR GCA 72 bp | AACAAGCCTTCCAGATACGCAGCAAATCATCTCAGGTaGTCCATCACCTCCACGTGTGCCCTTCCTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NKPSRYAANHLR*SITSTCALPCC Trigger: ACAGCAAGGAAGGGCACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAGGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CCA 72 bp | CCAGTGAGCAATGGGCAAGGGGCAGCCAGACCCACTTaGGAGAGTCTTAACACAACACACCAAAGATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PVSNGQGAARPT*ESLNTTHQRSE Trigger: TTCTGATCTTTGGTGTGTTGTGTTAAGACTCTCCCAAGTGGGTCTGGCTGCCCCTTGCCCATTGCTCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR GCA 72 bp | ACCTTGAACTCTGATCTGATATCTACCGGCCTTTGCTaGCCGAGTGCTGAGGTTAAAGGTGTGCACCACCAT | + |
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Preference number: 3 (lower is better) Translates to: TLNSDLISTGLC*PSAEVKGVHHH Trigger: ATGGTGGTGCACACCTTTAACCTCAGCACTCGGGCAGCAAAGGCCGGTAGATATCAGATCAGAGTTCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 72 bp | TCGTGTTATCTTTCACTATCTGTCCTTAACCATCTGTaGCCTCCTTCCTCGTTCCTTCTGGCTTGGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: SCYLSLSVLNHL*PPSSFLLAWAE Trigger: CTCCGCCCAAGCCAGAAGGAACGAGGAAGGAGGTCACAGATGGTTAAGGACAGATAGTGAAAGATAACACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 72 bp | AGGTTAAAGGTGTGCACCACCATGCCAGGCTTCTCCTaGTCATCTTTTATCATCTTTCAAAGCATCGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: RLKVCTTMPGFS*SSFIIFQSIVC Trigger: GCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATGGTGGTGCACACCTTTAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR-3UTR CAA 90 bp | CATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTTTTCCTCGGTGGACATaGAGCTTACAGATTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: HARLLLIIFYHLSKHRLPFPRWT*SLQISR Trigger: CCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAA...AGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR TCA 72 bp | TTATTTGCCCCCAATTACTTTTTCCTCGGTGGACATTaGGCTTACAGATTTCAAGGAAAGAGGATCCACTTA | + |
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Preference number: 3 (lower is better) Translates to: LFAPNYFFLGGH*AYRFQGKRIHL Trigger: TAAGTGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAGTAATTGGGGGCAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | GGCTACCCTGGCATGCCGGGTACCAGGGGAAGCCTGGAAGCTTACAGCCACACCGTCACCAACACAGCGTaGCATTCTCTGTCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GYPGMPGTRGSLEAYSHTVTNTA*HSLSSS Trigger: ACTGGAGGACAGAGAATGCCACGCTGTGTTGGTGAC...GGTGTGGCTGTAAGCTTCCAGGCTTCCCCTGGTACCCGGCATGCCAGGGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CAA 72 bp | ACAGAGGGCAAGGGAGGCCAGGCTCGGGTGCCACCTTaGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TEGKGGQARVPP*RSSSNPSQQQA Trigger: GGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTGGCCTCCCTTGCCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCTCGTTCCTTCTGGCTTGGGCGGAGCTGCATTGCCAGGGACCTCAGTTATCTGCTCCCATTCTaGCACCACCCTGACTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LLPRSFWLGRSCIARDLSYLLPF*HHPDFH Trigger: GTGAAAGTCAGGGTGGTGGCAGAATGGGAGCAGATA...ACTGAGGTCCCTGGCAATGCAGCTCCGCCCAAGCCAGAAGGAACGAGGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | CTTCCAGATACGCAGCAAATCATCTCAGGTGCTCCATCACCTCCACGTGTGCCCGCCCCAAAATCTGGATaGCTTGAAGCGACTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LPDTQQIISGAPSPPRVPAPKSG*LEATPA Trigger: TGCGGGAGTCGCTTCAAGGCATCCAGATTTTGGGGC...GGGCACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTCGGGTGCCACCTTTGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCCATGTCTGCAGGAGGGTaGGCCCCAAAATCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: QARVPPLRSSSNPSQQQAMSAGG*APKSGC Trigger: GCATCCAGATTTTGGGGCCCACCCTCCTGCAGACAT...GGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTTCCAGATACGCAGCAAATCATCTCAGGTGCTCCATCACCTCCACGTGTAACCCAGACAGAGATTaGGAAGTCCCCAGGCACGCC | + |
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Preference number: 4 (lower is better) Translates to: KPSRYAANHLRCSITSTCNPDRD*EVPRHA Trigger: GGCGTGCCTGGGGACTTCCCAATCTCTGTCTGGGTT...ACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTCGGGTGCCACCTTTGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCCGACAGGGAGGTGTTCTaGGTAACGACAATGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: QARVPPLRSSSNPSQQQADREVF*VTTMFP Trigger: GGGAAACATTGTCGTTACCCAGAACACCTCCCTGTC...GGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTCGGGTGCCACCTTTGAGGTCTAGTTCAAATCCATCCCAGCAACAAGCCGCACAGTCATATACATaGGAAAAACCAGCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: QARVPPLRSSSNPSQQQAAQSYT*EKPAAR Trigger: CCGTGCTGCTGGTTTTTCTCATGTATATGACTGTGC...GGCTTGTTGCTGGGATGGATTTGAACTAGACCTCAAAGGTGGCACCCGAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | TGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTCCTCCAGTGGGAGACACTaGGGCTTGAGACCCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CQASPDHLLSSFKASSASSSGRH*GLRPQH Trigger: GTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGA...GGAGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCCAGACCCACTTGGGAGAGTCTTAACACAACACACCAAAGATCAGAATAGGTTTGTAGAGGGGTaGAAGCAGCCCGTGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GQPDPLGRVLTQHTKDQNRFVEG*KQPVVL Trigger: GAGAACCACGGGCTGCTTCCACCCCTCTACAAACCT...ATTCTGATCTTTGGTGTGTTGTGTTAAGACTCTCCCAAGTGGGTCTGGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | TGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTCCTGGGGAGGAGTAGAGTaGTCCTGGCTAATGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CQASPDHLLSSFKASSASWGGVE*SWLMAG Trigger: GCCAGCCATTAGCCAGGAGCACTCTACTCCTCCCCA...GGAGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| 3UTR CAA 72 bp | AACAGTTACAGTGACACGAGATCTACCTTCCCAGACTaGATCATCCTTATCCTGCAGGTGCAGGCTACCCTG | + |
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Preference number: 4 (lower is better) Translates to: NSYSDTRSTFPD*IILILQVQATL Trigger: CAGGGTAGCCTGCACCTGCAGGATAAGGATGATCAAGTCTGGGAAGGTAGATCTCGTGTCACTGTAACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTCCTCTCATTCTTGGCAGTaGGTGTCAGAGGTGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: CQASPDHLLSSFKASSASSHSWQ*VSEVCG Trigger: TCCACACACCTCTGACACTCACTGCCAAGAATGAGA...GGAGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | CATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTAGCTTTTGGAATGTCTaGAGGAGGGTGGGCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: HARLLLIIFYHLSKHRLPSFWNV*RRVGPK Trigger: TTTGGGGCCCACCCTCCTGCAGACATTCCAAAAGCT...AGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | CTTTTTCCTCGGTGGACATTGAGCTTACAGATTTCAAGGAAAGAGGATCCACTTGATGTCCTTCTGGGTTaGAGCGCTCCGCACAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFPRWTLSLQISRKEDPLDVLLG*SAPHSH Trigger: ATGACTGTGCGGAGCGCTGCAACCCAGAAGGACATC...AAGTGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | GTAGTACGAGGCTGCTATCCCAAATCCTCTCTATCTCAACCTTTCTTTTATTTGTTCTCTGTCCTCCAGTaGGAGACACTGCGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VVRGCYPKSSLSQPFFYLFSVLQ*ETLRLE Trigger: CTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAA...CAAATAAAAGAAAGGTTGAGATAGAGAGGATTTGGGATAGCAGCCTCGTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | TTACTTTTTCCTCGGTGGACATTGAGCTTACAGATTTCAAGGAAAGAGGATCCAGCAAAGACAAATGGCTaGAAGCTGGAGGGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: LLFPRWTLSLQISRKEDPAKTNG*KLEGHT Trigger: GGTGTGGCCCTCCAGCTTCCAGCCATTTGTCTTTGC...TGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR GCA 90 bp | TTACTTTTTCCTCGGTGGACATTGAGCTTACAGATTTCAAGGAAAGAGGATCCAGTGTCTGGCTTTATCTaGTCCCATTCTGCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLFPRWTLSLQISRKEDPVSGFI*SHSATT Trigger: GGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACAC...TGGATCCTCTTTCCTTGAAATCTGTAAGCTCAATGTCCACCGAGGAAAAAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | CCCACTTGGGAGAGTCTTAACACAACACACCAAAGATCAGAATCCTGCTTGGTATTCATTGTCAGCTTTTaGAATGTCTGCAGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTWESLNTTHQRSESCLVFIVSF*NVCRRV Trigger: CACCCTCCTGCAGACATTCCAAAAGCTGACAATGAA...TACCAAGCAGGATTCTGATCTTTGGTGTGTTGTGTTAAGACTCTCCCAAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | CGAGCCCATCTATCTGATCGTGTTATCTTTCACTATCTGTCCTTAACCATCTGTGAAAGCAAAGACAAATaGCTGGAAGCTGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAHLSDRVIFHYLSLTICESKDK*LEAGGP Trigger: TGGCCCTCCAGCTTCCAGCCATTTGTCTTTGCTTTC...ACAGATGGTTAAGGACAGATAGTGAAAGATAACACGATCAGATAGATGGGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CCA 90 bp | CATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTAAGTCGCTTGGGTCATaGAGAAGAAAGGACAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HARLLLIIFYHLSKHRLPKSLGS*RRKDSL Trigger: TAGACTGTCCTTTCTTCTCCATGACCCAAGCGACTT...AGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | GGCTACCCTGGCATGCCGGGTACCAGGGGAAGCCTGGAAGCTTACAGCCACACCACCTGGCAGCAACACTaGAGCCCAGTGGCCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GYPGMPGTRGSLEAYSHTTWQQH*SPVAPG Trigger: CCCAGGGGCCACTGGGCTCAAGTGTTGCTGCCAGGT...GGTGTGGCTGTAAGCTTCCAGGCTTCCCCTGGTACCCGGCATGCCAGGGTAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS TCA 90 bp | TGCAGGCAGGGGCAGGCTTCCATTGTCCTTGACCTCCAGGCTGGCTaGGATGGTCACTTCGGTGCCCACGGTAGCAGGACCGTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CRQGQASIVLDLQAG*DGHFGAHGSRTVSS Trigger: ACTGCTGACGGTCCTGCTACCGTGGGCACCGAAGTGACCATCTCAGCCAGCCTGGAGGTCAAGGACAATGGAAGCCTGCCCCTGCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | TGGCTGGCACACCCAACAGTCGACAGCAGTAACCCAGACAGAGATTaGGAAGTCCCCAGGCACGCCGCCCACCACGTGGATGGTCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLAHPTVDSSNPDRD*EVPRHAAHHVDGRG Trigger: ACCTCGACCATCCACGTGGTGGGCGGCGTGCCTGGGGACTTCCCAATCTCTGTCTGGGTTACTGCTGTCGACTGTTGGGTGTGCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 90 bp | GTCACCAACACAGCGTGGCATTCTCTGTCCTCCAGTGGGAGACACTaGGGCTTGAGACCCCAGCACACATGCAGCGGTGGGCTTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTNTAWHSLSSSGRH*GLRPQHTCSGGLPK Trigger: CTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCACGCTGTGTTGGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | AGGTACTCAGACGGGGAGTCCAGAAAGAGGGATCCACAGCACACCTaGCAGCAACACTTGAGCCCAGTGGCCCCTGGGCTCTCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: RYSDGESRKRDPQHT*QQHLSPVAPGLSTM Trigger: CATCGTGGAGAGCCCAGGGGCCACTGGGCTCAAGTGTTGCTGCCAGGTGTGCTGTGGATCCCTCTTTCTGGACTCCCCGTCTGAGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 90 bp | TGTCAGAGGTGTGTGGATCCAGTGGAAACGGTAGAGGTGGGTGTCTaGAGGCAGGGGCAGGCTTCCATTGTCCTTGACCTCCAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQRCVDPVETVEVGV*RQGQASIVLDLQAG Trigger: GCCAGCCTGGAGGTCAAGGACAATGGAAGCCTGCCCCTGCCTGCAGACACCCACCTCTACCGTTTCCACTGGATCCACACACCTCTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS TCA 90 bp | ACACAGCGTGGCATTCTCTGTCCTCCAGTGGGAGACACTGCGGCTTaGGACCCCAGCACACATGCAGCGGTGGGCTTCCGAAGAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQRGILCPPVGDTAA*DPSTHAAVGFRRSS Trigger: TGAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCACGCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 90 bp | CTGTCCTCCAGTGGGAGACACTGCGGCTTGAGACCCCAGCACACATaGAGCGGTGGGCTTCCGAAGAAGTTCAGGTTCATTGTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSGRHCGLRPQHT*SGGLPKKFRFIVSF Trigger: AAAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | ACCCAGACAGAGATTGGGAAGTCCCCAGGCACGCCGCCCACCACGTaGATGGTCGAGGTTAGATTCTTCTCATTCTTGGCAGTGAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQTEIGKSPGTPPTT*MVEVRFFSFLAVSV Trigger: GACACTCACTGCCAAGAATGAGAAGAATCTAACCTCGACCATCCACGTGGTGGGCGGCGTGCCTGGGGACTTCCCAATCTCTGTCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | CAACACTTGAGCCCAGTGGCCCCTGGGCTCTCCACGATGTCCTTCTaGGTTGCAGCGCTCCGCACAGTCATATACATGAGAAAAACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHLSPVAPGLSTMSF*VAALRTVIYMRKTS Trigger: GCTGGTTTTTCTCATGTATATGACTGTGCGGAGCGCTGCAACCCAGAAGGACATCGTGGAGAGCCCAGGGGCCACTGGGCTCAAGTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | AAGACGTGGGTCAGGTTAAAAGATGTCCGAGTCACCAACACAGCGTaGCATTCTCTGTCCTCCAGTGGGAGACACTGCGGCTTGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: KTWVRLKDVRVTNTA*HSLSSSGRHCGLRP Trigger: GGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCACGCTGTGTTGGTGACTCGGACATCTTTTAACCTGACCCACGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | AGGGACTCTTTAATGGGGAGGAGTAGAGTGCTCCTGGCTAATGGCTaGCACACCCAACAGTCGACAGCAGTAACCCAGACAGAGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDSLMGRSRVLLANG*HTQQSTAVTQTEIG Trigger: CCCAATCTCTGTCTGGGTTACTGCTGTCGACTGTTGGGTGTGCCAGCCATTAGCCAGGAGCACTCTACTCCTCCCCATTAAAGAGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 90 bp | CAGTGGGAGACACTGCGGCTTGAGACCCCAGCACACATGCAGCGGTaGGCTTCCGAAGAAGTTCAGGTTCATTGTCAGCTTTTGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: QWETLRLETPAHMQR*ASEEVQVHCQLLEC Trigger: ACATTCCAAAAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 90 bp | CTGTATAGTGCCCTTTGTGGTGTCTGGCTTTATCTGCTCCCATTCTaGCACCACCCTGACTTTCACTGTGAAGGTTCCAGGGCTCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LYSALCGVWLYLLPF*HHPDFHCEGSRARV Trigger: TACTCGAGCCCTGGAACCTTCACAGTGAAAGTCAGGGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACACCACAAAGGGCACTATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | CCCACTTGGGAGAGTCTTAACACAACACACCAAAGATCAGAATCCTGCTTGGTAAGGGGCAGGCTTCCATaGTCCTTGACCTCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTWESLNTTHQRSESCLVRGRLP*SLTSRL Trigger: CAGCCTGGAGGTCAAGGACAATGGAAGCCTGCCCCT...TACCAAGCAGGATTCTGATCTTTGGTGTGTTGTGTTAAGACTCTCCCAAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 90 bp | TCACCAGTCTTCTGTATAGTGCCCTTTGTGGTGTCTGGCTTTATCTaGTCCCATTCTGCCACCACCCTGACTTTCACTGTGAAGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVFCIVPFVVSGFI*SHSATTLTFTVKVP Trigger: TGGAACCTTCACAGTGAAAGTCAGGGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACACCACAAAGGGCACTATACAGAAGACTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | CGAGCCCATCTATCTGATCGTGTTATCTTTCACTATCTGTCCTTAACCATCTGTAGGCTTCCATTGTCCTaGACCTCCAGGCTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAHLSDRVIFHYLSLTICRLPLS*TSRLAE Trigger: CTCAGCCAGCCTGGAGGTCAAGGACAATGGAAGCCT...ACAGATGGTTAAGGACAGATAGTGAAAGATAACACGATCAGATAGATGGGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTTCCAGATACGCAGCAAATCATCTCAGGTGCTCCATCACCTCCACGTGTAGATTCTTCTCATTCTaGGCAGTGAGTGTCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPSRYAANHLRCSITSTCRFFSF*AVSVRG Trigger: ACCTCTGACACTCACTGCCAAGAATGAGAAGAATCT...ACACGTGGAGGTGATGGAGCACCTGAGATGATTTGCTGCGTATCTGGAAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAGGTGTGCACCACCATGCCAGGCTTCTCCTGATCATCTTTTATCATCTTGTTCATTGTCAGCTTTaGGAATGTCTGCAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VKGVHHHARLLLIIFYHLVHCQL*ECLQEG Trigger: ACCCTCCTGCAGACATTCCAAAAGCTGACAATGAAC...AAGATGATAAAAGATGATCAGGAGAAGCCTGGCATGGTGGTGCACACCTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGGCTTCTCCTGATCATCTTTTATCATCTTTCAAAGCATCGTCTGCCTCCAGAAGTTCAGGTTCATaGTCAGCTTTTGGAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQASPDHLLSSFKASSASRSSGS*SAFGMS Trigger: AGACATTCCAAAAGCTGACAATGAACCTGAACTTCT...GGAGGCAGACGATGCTTTGAAAGATGATAAAAGATGATCAGGAGAAGCCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 72 bp | GCACACCTGGCAGCAACACTTGAGCCCAGTGGCCCCTaGGCTCTCCACGATGTCCTTCTGGGTTGCAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHLAATLEPSGP*ALHDVLLGCSA Trigger: AGCGCTGCAACCCAGAAGGACATCGTGGAGAGCCCAGGGGCCACTGGGCTCAAGTGTTGCTGCCAGGTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 72 bp | GACGGGGAGTCCAGAAAGAGGGATCCACAGCACACCTaGCAGCAACACTTGAGCCCAGTGGCCCCTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DGESRKRDPQHT*QQHLSPVAPGL Trigger: GAGCCCAGGGGCCACTGGGCTCAAGTGTTGCTGCCAGGTGTGCTGTGGATCCCTCTTTCTGGACTCCCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 72 bp | ACAGCGTGGCATTCTCTGTCCTCCAGTGGGAGACACTaGGGCTTGAGACCCCAGCACACATGCAGCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TAWHSLSSSGRH*GLRPQHTCSGG Trigger: CCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCACGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CAA 72 bp | TGGCATTCTCTGTCCTCCAGTGGGAGACACTGCGGCTaGAGACCCCAGCACACATGCAGCGGTGGGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: WHSLSSSGRHCG*RPQHTCSGGLP Trigger: CGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 72 bp | CACCCAACAGTCGACAGCAGTAACCCAGACAGAGATTaGGAAGTCCCCAGGCACGCCGCCCACCACGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPTVDSSNPDRD*EVPRHAAHHVD Trigger: ATCCACGTGGTGGGCGGCGTGCCTGGGGACTTCCCAATCTCTGTCTGGGTTACTGCTGTCGACTGTTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CAA 72 bp | TGGGTGTCTGCAGGCAGGGGCAGGCTTCCATTGTCCTaGACCTCCAGGCTGGCTGAGATGGTCACTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WVSAGRGRLPLS*TSRLAEMVTSV Trigger: CACCGAAGTGACCATCTCAGCCAGCCTGGAGGTCAAGGACAATGGAAGCCTGCCCCTGCCTGCAGACACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CAA 90 bp | AACACAGCGTGGCATTCTCTGTCCTCCAGTGGGAGACACTGCGGCTaGAGACCCCAGCACACATGCAGCGGTGGGCTTCCGAAGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NTAWHSLSSSGRHCG*RPQHTCSGGLPKKF Trigger: GAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACTGGAGGACAGAGAATGCCACGCTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS TCA 72 bp | GTCTGCAGGAGGGTGGGCCCCAAAATCTGGATGCCTTaGAGCGACTCCCGCAGATCCAACGATGCTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VCRRVGPKIWMP*SDSRRSNDAEK Trigger: CTTCTCAGCATCGTTGGATCTGCGGGAGTCGCTTCAAGGCATCCAGATTTTGGGGCCCACCCTCCTGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS GCA 72 bp | TGTGTGGATCCAGTGGAAACGGTAGAGGTGGGTGTCTaGAGGCAGGGGCAGGCTTCCATTGTCCTTGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVDPVETVEVGV*RQGQASIVLDL Trigger: GAGGTCAAGGACAATGGAAGCCTGCCCCTGCCTGCAGACACCCACCTCTACCGTTTCCACTGGATCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 72 bp | GGAATGTCTGCAGGAGGGTGGGCCCCAAAATCTGGATaGCTTGAAGCGACTCCCGCAGATCCAACGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GMSAGGWAPKSG*LEATPADPTML Trigger: CAGCATCGTTGGATCTGCGGGAGTCGCTTCAAGGCATCCAGATTTTGGGGCCCACCCTCCTGCAGACATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS GCA 72 bp | AGTGGGAGACACTGCGGCTTGAGACCCCAGCACACATaGAGCGGTGGGCTTCCGAAGAAGTTCAGGTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SGRHCGLRPQHT*SGGLPKKFRFI Trigger: AATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGTCTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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| CDS CCA 72 bp | ACACTGCGGCTTGAGACCCCAGCACACATGCAGCGGTaGGCTTCCGAAGAAGTTCAGGTTCATTGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLRLETPAHMQR*ASEEVQVHCQL Trigger: AAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCATGTGTGCTGGGGTCTCAAGCCGCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CAA 72 bp | CATGCAGCGGTGGGCTTCCGAAGAAGTTCAGGTTCATaGTCAGCTTTTGGAATGTCTGCAGGAGGGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HAAVGFRRSSGS*SAFGMSAGGWA Trigger: GGCCCACCCTCCTGCAGACATTCCAAAAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS GCA 72 bp | GCCCTTTGTGGTGTCTGGCTTTATCTGCTCCCATTCTaGCACCACCCTGACTTTCACTGTGAAGGTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALCGVWLYLLPF*HHPDFHCEGSR Trigger: CCTGGAACCTTCACAGTGAAAGTCAGGGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACACCACAAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CAA 90 bp | ATGCAGCGGTGGGCTTCCGAAGAAGTTCAGGTTCATTGTCAGCTTTaGGAATGTCTGCAGGAGGGTGGGCCCCAAAATCTGGATGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MQRWASEEVQVHCQL*ECLQEGGPQNLDAL Trigger: CAAGGCATCCAGATTTTGGGGCCCACCCTCCTGCAGACATTCCAAAAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCACCGCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CCA 72 bp | GTCACCAGTCTTCTGTATAGTGCCCTTTGTGGTGTCTaGCTTTATCTGCTCCCATTCTGCCACCACCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTSLLYSALCGV*LYLLPFCHHPD Trigger: GTCAGGGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACACCACAAAGGGCACTATACAGAAGACTGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CAA 72 bp | ACCACGTGGATGGTCGAGGTTAGATTCTTCTCATTCTaGGCAGTGAGTGTCAGAGGTGTGTGGATCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TTWMVEVRFFSF*AVSVRGVWIQW Trigger: CCACTGGATCCACACACCTCTGACACTCACTGCCAAGAATGAGAAGAATCTAACCTCGACCATCCACGTGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CAA 72 bp | TGGGCTTCCGAAGAAGTTCAGGTTCATTGTCAGCTTTaGGAATGTCTGCAGGAGGGTGGGCCCCAAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: WASEEVQVHCQL*ECLQEGGPQNL Trigger: CAGATTTTGGGGCCCACCCTCCTGCAGACATTCCAAAAGCTGACAATGAACCTGAACTTCTTCGGAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS GCA 72 bp | TTCTGTATAGTGCCCTTTGTGGTGTCTGGCTTTATCTaGTCCCATTCTGCCACCACCCTGACTTTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FCIVPFVVSGFI*SHSATTLTFTV Trigger: CACAGTGAAAGTCAGGGTGGTGGCAGAATGGGAGCAGATAAAGCCAGACACCACAAAGGGCACTATACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CCA 72 bp | TCACACATTGTAAGTTTTCACAGGTTTGTAGAGGGGTaGAAGCAGCCCGTGGTTCTCTCGGACGATTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHIVSFHRFVEG*KQPVVLSDDFQ Trigger: CTGGAAATCGTCCGAGAGAACCACGGGCTGCTTCCACCCCTCTACAAACCTGTGAAAACTTACAATGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CCA 72 bp | AAGAAGGAAGCGGACTTGAAGAAGTCGCTTGGGTCATaGAGAAGAAAGGACAGTCTAAGACTTCTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KKEADLKKSLGS*RRKDSLRLLLV Trigger: CACCAAGAGAAGTCTTAGACTGTCCTTTCTTCTCCATGACCCAAGCGACTTCTTCAAGTCCGCTTCCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
||
| CDS CCA 72 bp | TCGGTAAAAGAAGGAAGCGGACTTGAAGAAGTCGCTTaGGTCATGGAGAAGAAAGGACAGTCTAAGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVKEGSGLEEVA*VMEKKGQSKTS Trigger: AGAAGTCTTAGACTGTCCTTTCTTCTCCATGACCCAAGCGACTTCTTCAAGTCCGCTTCCTTCTTTTACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061446.8 |
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