Pregenerated sensors for TMEM129 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019295Ensembl transcript IDs: ENSMUST00000019439.9, ENSMUST00000200849.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCACAGTCACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTaGCACCCTGGTGACCCTCTCAACTGTCAGTGTCTACCCAACACC | + |
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Preference number: 1 (lower is better) Translates to: SHSHQDTLEEDFTLE*HPGDPLNCQCLPNT Trigger: GGTGTTGGGTAGACACTGACAGTTGAGAGGGTCACCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 90 bp | TTGAAACTGGCTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTaGGTTTGCTCTGGTAGCAAATCCCTGGGGTTAGGTGCAGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LKLAVSWSYFRDRQN*VCSGSKSLGLGAVL Trigger: CAACACTGCACCTAACCCCAGGGATTTGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAGCCAGTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 90 bp | GACAACAAAAGCATTGTGGACCCTCTAAAGCATATGCAACCCTCGTaGGGAACTTGGGAAAGTACTCTGTCATACCTTCCTACCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: DNKSIVDPLKHMQPS*GTWESTLSYLPTKK Trigger: CTTCTTGGTAGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATATGCTTTAGAGGGTCCACAATGCTTTTGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 90 bp | ATGCTATGTAATAGAATTAAGGCAAACAGGCCAAATAAAGGCTCTTaGGCCAAACTCCAATGTCTTGGGGCTTTGGAGCATCCTATGTGG | + |
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Preference number: 1 (lower is better) Translates to: MLCNRIKANRPNKGS*AKLQCLGALEHPMW Trigger: CCACATAGGATGCTCCAAAGCCCCAAGACATTGGAGTTTGGCTCAAGAGCCTTTATTTGGCCTGTTTGCCTTAATTCTATTACATAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR GCA 90 bp | TCTACCCAACACCATAGGGTCTGGTTTTTAACTGAAATACAGGTATaGTATGTAATAGAATTAAGGCAAACAGGCCAAATAAAGGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: STQHHRVWFLTEIQV*YVIELRQTGQIKAL Trigger: AAGAGCCTTTATTTGGCCTGTTTGCCTTAATTCTATTACATAGCATACCTGTATTTCAGTTAAAAACCAGACCCTATGGTGTTGGGTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACTCCAATGTCTTGGGGCTTTGGAGCATCCTATGTGGCATATCAGCCCCACGGCACTCCCCAGAAGTaGCTAGTGGAGACACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QTPMSWGFGASYVAYQPHGTPQK*LVETQN Trigger: GTTCTGTGTCTCCACTAGCCACTTCTGGGGAGTGCC...GTGGGGCTGATATGCCACATAGGATGCTCCAAAGCCCCAAGACATTGGAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR CAA 90 bp | CTTGGGAAAGTACTCTGTCATACCTTCCTACCAAGAAGTGGCCCCTaGGCTAGCCACAGTCACCAGGATACCCTAGAAGAGGACTTCACA | + |
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Preference number: 2 (lower is better) Translates to: LGKVLCHTFLPRSGP*ASHSHQDTLEEDFT Trigger: TGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGGCTAGCCAAGGGGCCACTTCTTGGTAGGAAGGTATGACAGAGTACTTTCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR-3UTR TCA 90 bp | ATATGCAACCCTCGTGAGGAACTTGGGAAAGTACTCTGTCATACCTTCCTACCATGGAAGAGAAGAGGCTaGAGGTCCAGGGATAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ICNPREELGKVLCHTFLPWKRRG*RSRDRA Trigger: TGCCCTATCCCTGGACCTTCAGCCTCTTCTCTTCCA...TGGTAGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGTCACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTGGCACCCTCAAACTCCAATGTCTTaGGGCTTTGGAGCATCCTAT | + |
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Preference number: 2 (lower is better) Translates to: SHSHQDTLEEDFTLEWHPQTPMS*GFGASY Trigger: ATAGGATGCTCCAAAGCCCCAAGACATTGGAGTTTG...AGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAACTGACCATAGATAGACTCAAGGTAGAGAGTGGCTGTAGATTAAGTGTGGGCACTCCCCAGAAGTaGCTAGTGGAGACACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LQLTIDRLKVESGCRLSVGTPQK*LVETQN Trigger: GTTCTGTGTCTCCACTAGCCACTTCTGGGGAGTGCC...CACACTTAATCTACAGCCACTCTCTACCTTGAGTCTATCTATGGTCAGTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTAAAAATAACTTCAAACCACTTGGCCTCTGCTAGGCAGACAGCCCTTGAATTGGTCTGCTACTACTaGTTTCAACAACTAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: WLKITSNHLASARQTALELVCYY*FQQLNV Trigger: TACATTTAGTTGTTGAAAGCAGTAGTAGCAGACCAA...TTCAAGGGCTGTCTGCCTAGCAGAGGCCAAGTGGTTTGAAGTTATTTTTAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTCTGCTACTACTGCTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTCAACACCATAGGGTCTaGTTTTTAACTGAAATACAG | + |
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Preference number: 2 (lower is better) Translates to: LGLLLLLSTTKCKCFRTSQHHRV*FLTEIQ Trigger: CTGTATTTCAGTTAAAAACCAGACCCTATGGTGTTG...ACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAGCAGTAGTAGCAGACCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | CCTAGAAGAGGACTTCACACTAGAGTGGCACCCTGGTaGCCCTCTCAACTGTCAGTGTCTACCCAACACCAT | + |
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Preference number: 3 (lower is better) Translates to: PRRGLHTRVAPW*PSQLSVSTQHH Trigger: ATGGTGTTGGGTAGACACTGACAGTTGAGAGGGTCACCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | GCTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTaGGTTTGCTCTGGTAGCAAATCCCTGGGGTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: AVSWSYFRDRQN*VCSGSKSLGLG Trigger: ACCTAACCCCAGGGATTTGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR CCA 72 bp | AAGGCTCTTGAGCCAAACTCCAATGTCTTGGGGCTTTaGAGCATCCTATGTGGCATATCAGCCCCACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: KALEPNSNVLGL*SILCGISAPPG Trigger: TCCAGGTGGGGCTGATATGCCACATAGGATGCTCCAAAGCCCCAAGACATTGGAGTTTGGCTCAAGAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR CCA 72 bp | CACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTaGCACCCTGGTGACCCTCTCAACTGTCAGTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: HQDTLEEDFTLE*HPGDPLNCQCL Trigger: TAGACACTGACAGTTGAGAGGGTCACCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR CCA 72 bp | GGTCATCCCTCTAGCAGCTACACTTTGTGTCAGAGATaGAGAGTAAAGAGCAACCTCTTCCCCACCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: GHPSSSYTLCQR*RVKSNLFPTHL Trigger: CAGATGGGTGGGGAAGAGGTTGCTCTTTACTCTCCATCTCTGACACAAAGTGTAGCTGCTAGAGGGATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | AGCATTGTGGACCCTCTAAAGCATATGCAACCCTCGTaGGGAACTTGGGAAAGTACTCTGTCATACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SIVDPLKHMQPS*GTWESTLSYLP Trigger: AGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATATGCTTTAGAGGGTCCACAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | GCAACCTCTTCCCCACCCATCTGTACCATAGATAAGTaGGTACATCTATGTATATGTGCGTCCATCAGAACC | + |
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Preference number: 3 (lower is better) Translates to: ATSSPPICTIDK*VHLCICASIRT Trigger: GGTTCTGATGGACGCACATATACATAGATGTACTCACTTATCTATGGTACAGATGGGTGGGGAAGAGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | AATAGAATTAAGGCAAACAGGCCAAATAAAGGCTCTTaGGCCAAACTCCAATGTCTTGGGGCTTTGGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: NRIKANRPNKGS*AKLQCLGALEH Trigger: ATGCTCCAAAGCCCCAAGACATTGGAGTTTGGCTCAAGAGCCTTTATTTGGCCTGTTTGCCTTAATTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR TCA 72 bp | CTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTTaGAGGAGAGGTCATCCCTCTAGCAGCTACACTTTG | + |
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Preference number: 3 (lower is better) Translates to: LSTTKCKCFRTS*RRGHPSSSYTL Trigger: CAAAGTGTAGCTGCTAGAGGGATGACCTCTCCTTCAACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| 3UTR GCA 72 bp | CACCATAGGGTCTGGTTTTTAACTGAAATACAGGTATaGTATGTAATAGAATTAAGGCAAACAGGCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: HHRVWFLTEIQV*YVIELRQTGQI Trigger: TATTTGGCCTGTTTGCCTTAATTCTATTACATAGCATACCTGTATTTCAGTTAAAAACCAGACCCTATGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | ACCTCTTGTCAAAGTCAAAGAGCTTCAGGCACTCCCCAGAAGTGGCTAGTGGAGAGCGGGCACGGCAAGTaGGGCAGGGCACACGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TSCQSQRASGTPQKWLVESGHGK*GRAHGW Trigger: CCAGCCGTGTGCCCTGCCCCACTTGCCGTGCCCGCT...CTCCACTAGCCACTTCTGGGGAGTGCCTGAAGCTCTTTGACTTTGACAAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS-3UTR CCA 90 bp | CACTTGGCCTCTGCTAGGCAGACAGCCCTTGAAACTGGCTGTCTCCTGGTCATAAGGTCCCCCAGGCTCTaGCGGATGACCACATTGGCT | + |
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Preference number: 4 (lower is better) Translates to: HLASARQTALETGCLLVIRSPRL*RMTTLA Trigger: AGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCT...TATGACCAGGAGACAGCCAGTTTCAAGGGCTGTCTGCCTAGCAGAGGCCAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | ACTTTGTGTCAGAGATGGAGAGTAAAGAGCAACCTCTTCCCCACCCATCTGTACAGGCGGCGTCCTCGCTaGCCAGCCAGCCCGACAACA | + |
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Preference number: 4 (lower is better) Translates to: TLCQRWRVKSNLFPTHLYRRRPR*PASPTT Trigger: TGTTGTCGGGCTGGCTGGGCAGCGAGGACGCCGCCT...GTACAGATGGGTGGGGAAGAGGTTGCTCTTTACTCTCCATCTCTGACACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | ACCTCTTGTCAAAGTCAAAGAGCTTCAGGCACTCCCCAGAAGTGGCTAGTGGAGGGGGATCCTGGCGGCTaGCAAACCACTTGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TSCQSQRASGTPQKWLVEGDPGG*QTTCPC Trigger: GCATGGGCAAGTGGTTTGCCAGCCGCCAGGATCCCC...CTCCACTAGCCACTTCTGGGGAGTGCCTGAAGCTCTTTGACTTTGACAAGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS-3UTR TCA 90 bp | CTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTGAGTTTGCTCTGGTAGCACCAGGCTCTGGCGGATaGCCACATTGGCTGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LSPGHTSGTGRTEFALVAPGSGG*PHWLHF Trigger: GAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGG...TGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR TCA 90 bp | CTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTGAGTTTGCTCTGGTAGCACCGACCGCTGGCTCCTaGCAGGTCTTCACCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: LSPGHTSGTGRTEFALVAPTAGS*QVFTNF Trigger: GAAGTTGGTGAAGACCTGTCAGGAGCCAGCGGTCGG...TGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | GTCTTGGGGCTTTGGAGCATCCTATGTGGCATATCAGCCCCACCTGGAGGTAAAACGCTGGCCCGTGTTTaGATGCAGCCTATACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGLWSILCGISAPPGGKTLARV*MQPIQG Trigger: GCCCTGTATAGGCTGCATGCAAACACGGGCCAGCGT...TTTACCTCCAGGTGGGGCTGATATGCCACATAGGATGCTCCAAAGCCCCAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | GGAAGAGAAGAGGCTGAAGGTCCAGGGATAGGGCATTTCCATGAGAATTTCTTCCAAGTGTCAGGGCGCTaGGGATCCTGGCGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GREEAEGPGIGHFHENFFQVSGR*GSWRLA Trigger: TGCCAGCCGCCAGGATCCCCAGCGCCCTGACACTTG...GAAGAAATTCTCATGGAAATGCCCTATCCCTGGACCTTCAGCCTCTTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS-3UTR TCA 90 bp | CCACAGTCACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTGGCACCCTGGGAGATCATGCTGCCGTaGCTCTGTCACAGTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PQSPGYPRRGLHTRVAPWEIMLP*LCHSQV Trigger: CACTTGACTGTGACAGAGTCACGGCAGCATGATCTC...CCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | CACTTGGCCTCTGCTAGGCAGACAGCCCTTGAAACTGGCTGTCTCCTGGTCATATCTGGCGAGAGATCATaGTGCCGTGACTCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HLASARQTALETGCLLVISGERS*CRDSVT Trigger: TGTGACAGAGTCACGGCAGCATGATCTCTCGCCAGA...TATGACCAGGAGACAGCCAGTTTCAAGGGCTGTCTGCCTAGCAGAGGCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | ACCTCTTGTCAAAGTCAAAGAGCTTCAGGCACTCCCCAGAAGTGGCTAGTGGAGAGCACACATCCAGGATaGAGAAGCGGGCACGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TSCQSQRASGTPQKWLVESTHPG*RSGHGK Trigger: CTTGCCGTGCCCGCTTCTGCATCCTGGATGTGTGCT...CTCCACTAGCCACTTCTGGGGAGTGCCTGAAGCTCTTTGACTTTGACAAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| 3UTR CAA 72 bp | CTTCAAACCACTTGGCCTCTGCTAGGCAGACAGCCCTaGAAACTGGCTGTCTCCTGGTCATACTTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LQTTWPLLGRQP*KLAVSWSYFRD Trigger: GTCCCTGAAGTATGACCAGGAGACAGCCAGTTTCAAGGGCTGTCTGCCTAGCAGAGGCCAAGTGGTTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR TCA 90 bp | GGAAGAGAAGAGGCTGAAGGTCCAGGGATAGGGCATTTCCATGAGAATTTCTTCCCGACCGCTGGCTCCTaGCAGGTCTTCACCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: GREEAEGPGIGHFHENFFPTAGS*QVFTNF Trigger: GAAGTTGGTGAAGACCTGTCAGGAGCCAGCGGTCGG...GAAGAAATTCTCATGGAAATGCCCTATCCCTGGACCTTCAGCCTCTTCTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS-3UTR GCA 90 bp | CCCTCTAGCAGCTACACTTTGTGTCAGAGATGGAGAGTAAAGAGCAACCTCTTCCCCGACAACAGATTCTaGACTGTGAGCCCGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: PSSSYTLCQRWRVKSNLFPDNRF*TVSPAE Trigger: CTCGGCCGGGCTCACAGTGCAGAATCTGTTGTCGGG...GAAGAGGTTGCTCTTTACTCTCCATCTCTGACACAAAGTGTAGCTGCTAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | ACTCTTCAACTGACCATAGATAGACTCAAGGTAGAGAGTGGCTGTAGATTAAGTAGCGGGCACGGCAAGTaGGGCAGGGCACACGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TLQLTIDRLKVESGCRLSSGHGK*GRAHGW Trigger: CCAGCCGTGTGCCCTGCCCCACTTGCCGTGCCCGCT...ACTTAATCTACAGCCACTCTCTACCTTGAGTCTATCTATGGTCAGTTGAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS-3UTR TCA 90 bp | TCAAAGAGCTTCAGGCACTCCCCAGAAGTGGCTAGTGGAGACACAGAACATACTAACGGCAGCAGTGAGTaGCACAGTAGTGTGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: SKSFRHSPEVASGDTEHTNGSSE*HSSVAE Trigger: TTCCGCCACACTACTGTGTCACTCACTGCTGCCGTT...AGTATGTTCTGTGTCTCCACTAGCCACTTCTGGGGAGTGCCTGAAGCTCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | ACAGGCCAAATAAAGGCTCTTGAGCCAAACTCCAATGTCTTGGGGCTTTGGAGCGAAGAAGCGACAGCCTaGCAACCAGACTGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TGQIKALEPNSNVLGLWSEEATA*QPDCGR Trigger: CCTTCCACAGTCTGGTTGGCAGGCTGTCGCTTCTTC...GCTCCAAAGCCCCAAGACATTGGAGTTTGGCTCAAGAGCCTTTATTTGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGCAGCTACACTTTGTGTCAGAGATGGAGAGTAAAGAGCAACCTCTTCCTGCCAACCAGACTGTaGAAGGGCATAGAGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSSSYTLCQRWRVKSNLFLPTRL*KGIEGQ Trigger: CTGGCCCTCTATGCCCTTCCACAGTCTGGTTGGCAG...GAAGAGGTTGCTCTTTACTCTCCATCTCTGACACAAAGTGTAGCTGCTAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | ACAGGCCAAATAAAGGCTCTTGAGCCAAACTCCAATGTCTTGGGGCTTTGGAGCGAACACGAAGCACACTaGGAAGACCAGGTAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TGQIKALEPNSNVLGLWSEHEAH*EDQVGQ Trigger: TTGGCCTACCTGGTCTTCGCAGTGTGCTTCGTGTTC...GCTCCAAAGCCCCAAGACATTGGAGTTTGGCTCAAGAGCCTTTATTTGGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | CTTGGTCTGCTACTACTGCTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTCAAGTGTCAGGGCGCTaGGGATCCTGGCGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGLLLLLSTTKCKCFRTSQVSGR*GSWRLA Trigger: TGCCAGCCGCCAGGATCCCCAGCGCCCTGACACTTG...ACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAGCAGTAGTAGCAGACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR TCA 90 bp | ATATGCAACCCTCGTGAGGAACTTGGGAAAGTACTCTGTCATACCTTCCTACCAAGAACTCGTTGGGCGTaGACACGAAGCACACTGCGA | + |
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Preference number: 4 (lower is better) Translates to: ICNPREELGKVLCHTFLPRTRWA*TRSTLR Trigger: TCGCAGTGTGCTTCGTGTTCACGCCCAACGAGTTCT...TGGTAGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR TCA 90 bp | ATATGCAACCCTCGTGAGGAACTTGGGAAAGTACTCTGTCATACCTTCCTACCACTGGTTGCTGGGTACTaGATAGGCTGGGTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: ICNPREELGKVLCHTFLPLVAGY*IGWVDL Trigger: GAGGTCAACCCAGCCTATTCAGTACCCAGCAACCAG...TGGTAGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | TGGTTAAAAATAACTTCAAACCACTTGGCCTCTGCTAGGCAGACAGCCCTTGAAAGCACACATCCAGGATaGAGAAGCGGGCACGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: WLKITSNHLASARQTALESTHPG*RSGHGK Trigger: CTTGCCGTGCCCGCTTCTGCATCCTGGATGTGTGCT...TTCAAGGGCTGTCTGCCTAGCAGAGGCCAAGTGGTTTGAAGTTATTTTTAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | CTTGGTCTGCTACTACTGCTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTGGGGATCCTGGCGGCTaGCAAACCACTTGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: LGLLLLLSTTKCKCFRTSGDPGG*QTTCPC Trigger: GCATGGGCAAGTGGTTTGCCAGCCGCCAGGATCCCC...ACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAGCAGTAGTAGCAGACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | CTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTGAGTTTGCTCTGGTAGCACATGTACACGGTATGTaGTCACCTTCATTACCCATG | + |
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Preference number: 4 (lower is better) Translates to: LSPGHTSGTGRTEFALVAHVHGM*SPSLPM Trigger: CATGGGTAATGAAGGTGACCACATACCGTGTACATG...TGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | CAAACTCCAATGTCTTGGGGCTTTGGAGCATCCTATGTGGCATATCAGCCCCACCGTATAGTAAGAAGCTaGACAGGTAGGTTTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QTPMSWGFGASYVAYQPHRIVRS*TGRFES Trigger: AGACTCAAACCTACCTGTGCAGCTTCTTACTATACG...GTGGGGCTGATATGCCACATAGGATGCTCCAAAGCCCCAAGACATTGGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | ACTCTTCAACTGACCATAGATAGACTCAAGGTAGAGAGTGGCTGTAGATTAAGTTTCTGGGGCCTGACCTaGGGAGTAGAGCTGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLQLTIDRLKVESGCRLSFWGLT*GVELLF Trigger: GAAAAGCAGCTCTACTCCCCAGGTCAGGCCCCAGAA...ACTTAATCTACAGCCACTCTCTACCTTGAGTCTATCTATGGTCAGTTGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CCA 90 bp | ATATGCAACCCTCGTGAGGAACTTGGGAAAGTACTCTGTCATACCTTCCTACCAGGGTTGACCTCCACATaGGAAGCAAATGTTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: ICNPREELGKVLCHTFLPGLTST*EANVSR Trigger: CCTAGAAACATTTGCTTCCCATGTGGAGGTCAACCC...TGGTAGGAAGGTATGACAGAGTACTTTCCCAAGTTCCTCACGAGGGTTGCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR GCA 90 bp | AGAATTTCTTCTAAAACTCTTCAACTGACCATAGATAGACTCAAGGTAGAGAGTTATCAAAGGGCTGTGTaGCAGGGCTGGTGCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RISSKTLQLTIDRLKVESYQRAV*QGWCLP Trigger: TGGCAAGCACCAGCCCTGGCACACAGCCCTTTGATA...ACTCTCTACCTTGAGTCTATCTATGGTCAGTTGAAGAGTTTTAGAAGAAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS TCA 90 bp | GGCGCTGGGGATCCTGGCGGCTGGCAAACCACTTGCCCATGCAAGTaGGACACCACATGGGTCGGCAGTAACACTGCTGGCACTCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: GAGDPGGWQTTCPCK*DTTWVGSNTAGTRR Trigger: TCGGCGAGTGCCAGCAGTGTTACTGCCGACCCATGTGGTGTCTCACTTGCATGGGCAAGTGGTTTGCCAGCCGCCAGGATCCCCAGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS GCA 90 bp | GAGCCCGGCCGAGTAGAACTCGTTGGGCGTGAACACGAAGCACACTaGGAAGACCAGGTAGGCCAACGTGAAGGTCACCTCAGGGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: EPGRVELVGREHEAH*EDQVGQREGHLRAV Trigger: GACAGCCCTGAGGTGACCTTCACGTTGGCCTACCTGGTCTTCGCAGTGTGCTTCGTGTTCACGCCCAACGAGTTCTACTCGGCCGGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 90 bp | AGTAGCCTAACGGCAGCAGTGAGTGACACAGTAGTGTGGCGGAAGTaGGGCGAAGGTGGTAAGGTACGAAGGCGGCGTCCTCGCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSLTAAVSDTVVWRK*GEGGKVRRRRPRCP Trigger: TGGGCAGCGAGGACGCCGCCTTCGTACCTTACCACCTTCGCCGCACTTCCGCCACACTACTGTGTCACTCACTGCTGCCGTTAGGCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 90 bp | ACACCACATGGGTCGGCAGTAACACTGCTGGCACTCGCCGACCGCTaGCTCCTGACAGGTCTTCACCAACTTCACGCTGGCCCGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TPHGSAVTLLALADR*LLTGLHQLHAGPCL Trigger: CAAACACGGGCCAGCGTGAAGTTGGTGAAGACCTGTCAGGAGCCAGCGGTCGGCGAGTGCCAGCAGTGTTACTGCCGACCCATGTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS CCA 90 bp | TGCCCATGTAGTAGCCTAACGGCAGCAGTGAGTGACACAGTAGTGTaGCGGAAGTGCGGCGAAGGTGGTAAGGTACGAAGGCGGCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CPCSSLTAAVSDTVV*RKCGEGGKVRRRRP Trigger: AGGACGCCGCCTTCGTACCTTACCACCTTCGCCGCACTTCCGCCACACTACTGTGTCACTCACTGCTGCCGTTAGGCTACTACATGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 90 bp | GAACTCTGTGTTGATGGAAGAAGCGACAGCCTGCCAACCAGACTGTaGAAGGGCATAGAGGGCCAGGGTTTGGGCCAGTGGGTGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: ELCVDGRSDSLPTRL*KGIEGQGLGQWVSG Trigger: ACCCGACACCCACTGGCCCAAACCCTGGCCCTCTATGCCCTTCCACAGTCTGGTTGGCAGGCTGTCGCTTCTTCCATCAACACAGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | CCACAGTCACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTGGCACCCTGGATAGAGGGCCAGGGTTaGGGCCAGTGGGTGTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: PQSPGYPRRGLHTRVAPWIEGQG*GQWVSG Trigger: ACCCGACACCCACTGGCCCAAACCCTGGCCCTCTAT...CCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS TCA 90 bp | GGGAAGCAAATGTTTCTAGGAAGAGGTCCCCCAGGCTCTGGCGGATaGCCACATTGGCTGCACTTCGGATTGGGGCGTGGAGCTTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GKQMFLGRGPPGSGG*PHWLHFGLGRGASH Trigger: GTGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCTCTTCCTAGAAACATTTGCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 90 bp | TCCACATGGGAAGCAAATGTTTCTAGGAAGAGGTCCCCCAGGCTCTaGCGGATGACCACATTGGCTGCACTTCGGATTGGGGCGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: STWEANVSRKRSPRL*RMTTLAALRIGAWS Trigger: GCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCTCTTCCTAGAAACATTTGCTTCCCATGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 90 bp | GGCTGTGTGCCAGGGCTGGTGCTTGCCACACGTATAGTAAGAAGCTaGACAGGTAGGTTTGAGTCTGGCGAGAGATCATGCTGCCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GCVPGLVLATRIVRS*TGRFESGERSCCRD Trigger: GTCACGGCAGCATGATCTCTCGCCAGACTCAAACCTACCTGTGCAGCTTCTTACTATACGTGTGGCAAGCACCAGCCCTGGCACACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 90 bp | GCTCCTGACAGGTCTTCACCAACTTCACGCTGGCCCGTGTTTGCATaGAGCCTATACAGGGCTCCAGCTCCTGGTTGCTGGGTACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: APDRSSPTSRWPVFA*SLYRAPAPGCWVLN Trigger: ATTCAGTACCCAGCAACCAGGAGCTGGAGCCCTGTATAGGCTGCATGCAAACACGGGCCAGCGTGAAGTTGGTGAAGACCTGTCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | CCACAGTCACCAGGATACCCTAGAAGAGGACTTCACACTAGAGTGGCACCCTGGCGTCGGAACTCTGTGTaGATGGAAGAAGCGACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PQSPGYPRRGLHTRVAPWRRNSV*MEEATA Trigger: GGCTGTCGCTTCTTCCATCAACACAGAGTTCCGACG...CCAGGGTGCCACTCTAGTGTGAAGTCCTCTTCTAGGGTATCCTGGTGACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 90 bp | CCTGACCTGGGGAGTAGAGCTGCTTTTCTGAGGCTGCAAAGCACATaGCCATGTAGTAGCCTAACGGCAGCAGTGAGTGACACAGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: PDLGSRAAFLRLQST*PCSSLTAAVSDTVV Trigger: CACTACTGTGTCACTCACTGCTGCCGTTAGGCTACTACATGGGCATGTGCTTTGCAGCCTCAGAAAAGCAGCTCTACTCCCCAGGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 90 bp | AGGCTCTGGCGGATGACCACATTGGCTGCACTTCGGATTGGGGCGTaGAGCTTCTCACATAGTTCGCCATATTCTGATGAATTCAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: RLWRMTTLAALRIGA*SFSHSSPYSDEFSR Trigger: TCGGCTGAATTCATCAGAATATGGCGAACTATGTGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | GGAAGAGAAGAGGCTGAAGGTCCAGGGATAGGGCATTTCCATGAGAATTTCTTCTGGCGGATGACCACATaGGCTGCACTTCGGATTGGG | + |
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Preference number: 5 (lower is better) Translates to: GREEAEGPGIGHFHENFFWRMTT*AALRIG Trigger: CCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCA...GAAGAAATTCTCATGGAAATGCCCTATCCCTGGACCTTCAGCCTCTTCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 90 bp | CACCTTCATTACCCATGTGTCTGTCACAATCACTCGGGCACCAGGTaGCCCTGTAGCAAACTTGTCAATCCGTCGGAACTCTGTGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: HLHYPCVCHNHSGTR*PCSKLVNPSELCVD Trigger: ATCAACACAGAGTTCCGACGGATTGACAAGTTTGCTACAGGGGCACCTGGTGCCCGAGTGATTGTGACAGACACATGGGTAATGAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | CTGTCTCCTGGTCATACTTCAGGGACAGGCAGAACTGAGTTTGCTCTGGTAGCACAAGTGAACATCCTGTaGCTGAGCCACATGTACACG | + |
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Preference number: 5 (lower is better) Translates to: LSPGHTSGTGRTEFALVAQVNIL*LSHMYT Trigger: CGTGTACATGTGGCTCAGCAACAGGATGTTCACTTG...TGCTACCAGAGCAAACTCAGTTCTGCCTGTCCCTGAAGTATGACCAGGAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 90 bp | CAGTCAAGTGAACATCCTGTTGCTGAGCCACATGTACACGGTATGTaGTCACCTTCATTACCCATGTGTCTGTCACAATCACTCGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: QSSEHPVAEPHVHGM*SPSLPMCLSQSLGH Trigger: GTGCCCGAGTGATTGTGACAGACACATGGGTAATGAAGGTGACCACATACCGTGTACATGTGGCTCAGCAACAGGATGTTCACTTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | CTTGGTCTGCTACTACTGCTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTCACGCTGGCCCGTGTTaGCATGCAGCCTATACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LGLLLLLSTTKCKCFRTSHAGPC*HAAYTG Trigger: CCCTGTATAGGCTGCATGCAAACACGGGCCAGCGTG...ACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAGCAGTAGTAGCAGACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS-3UTR CAA 90 bp | GTCTGCTACTACTGCTTTCAACAACTAAATGTAAGTGCTTCAGGACAAGTTGAAGCTGCACAGGTAGGTTaGAGTCTGGCGAGAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: VCYYCFQQLNVSASGQVEAAQVG*SLARDH Trigger: ATGATCTCTCGCCAGACTCAAACCTACCTGTGCAGC...TTCAACTTGTCCTGAAGCACTTACATTTAGTTGTTGAAAGCAGTAGTAGCAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 72 bp | GGGTCGGCAGTAACACTGCTGGCACTCGCCGACCGCTaGCTCCTGACAGGTCTTCACCAACTTCACGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSAVTLLALADR*LLTGLHQLHAG Trigger: GCCAGCGTGAAGTTGGTGAAGACCTGTCAGGAGCCAGCGGTCGGCGAGTGCCAGCAGTGTTACTGCCGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS CCA 72 bp | AGCACACATCCAGGATGCAGAAGCGGGCACGGCAAGTaGGGCAGGGCACACGGCTGGCTAGCCAAGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: STHPGCRSGHGK*GRAHGWLAKCQ Trigger: CTGACACTTGGCTAGCCAGCCGTGTGCCCTGCCCCACTTGCCGTGCCCGCTTCTGCATCCTGGATGTGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019439.9 ENSMUST00000200849.2 |
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| CDS GCA 72 bp | ACGGCAGCAGTGAGTGACACAGTAGTGTGGCGGAAGTaGGGCGAAGGTGGTAAGGTACGAAGGCGGCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TAAVSDTVVWRK*GEGGKVRRRRP Trigger: AGGACGCCGCCTTCGTACCTTACCACCTTCGCCGCACTTCCGCCACACTACTGTGTCACTCACTGCTGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 72 bp | AGGAAGAGGTCCCCCAGGCTCTGGCGGATGACCACATaGGCTGCACTTCGGATTGGGGCGTGGAGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RKRSPRLWRMTT*AALRIGAWSFS Trigger: TGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCTCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS TCA 72 bp | ATGTTTCTAGGAAGAGGTCCCCCAGGCTCTGGCGGATaGCCACATTGGCTGCACTTCGGATTGGGGCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: MFLGRGPPGSGG*PHWLHFGLGRG Trigger: TCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCTCTTCCTAGAAACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 72 bp | AGGTCTTCACCAACTTCACGCTGGCCCGTGTTTGCATaGAGCCTATACAGGGCTCCAGCTCCTGGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSSPTSRWPVFA*SLYRAPAPGCW Trigger: CCAGCAACCAGGAGCTGGAGCCCTGTATAGGCTGCATGCAAACACGGGCCAGCGTGAAGTTGGTGAAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 72 bp | CGAGTAGAACTCGTTGGGCGTGAACACGAAGCACACTaGGAAGACCAGGTAGGCCAACGTGAAGGTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: RVELVGREHEAH*EDQVGQREGHL Trigger: GAGGTGACCTTCACGTTGGCCTACCTGGTCTTCGCAGTGTGCTTCGTGTTCACGCCCAACGAGTTCTACTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 72 bp | CTGACAGGTCTTCACCAACTTCACGCTGGCCCGTGTTaGCATGCAGCCTATACAGGGCTCCAGCTCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LTGLHQLHAGPC*HAAYTGLQLLV Trigger: AACCAGGAGCTGGAGCCCTGTATAGGCTGCATGCAAACACGGGCCAGCGTGAAGTTGGTGAAGACCTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 90 bp | CCAGGTGCCCCTGTAGCAAACTTGTCAATCCGTCGGAACTCTGTGTaGATGGAAGAAGCGACAGCCTGCCAACCAGACTGTGGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGAPVANLSIRRNSV*MEEATACQPDCGRA Trigger: TGCCCTTCCACAGTCTGGTTGGCAGGCTGTCGCTTCTTCCATCAACACAGAGTTCCGACGGATTGACAAGTTTGCTACAGGGGCACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 90 bp | AATGTTTCTAGGAAGAGGTCCCCCAGGCTCTGGCGGATGACCACATaGGCTGCACTTCGGATTGGGGCGTGGAGCTTCTCACATAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: NVSRKRSPRLWRMTT*AALRIGAWSFSHSS Trigger: CGAACTATGTGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCGCCAGAGCCTGGGGGACCTCTTCCTAGAAACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS GCA 72 bp | TACCCATGTGTCTGTCACAATCACTCGGGCACCAGGTaGCCCTGTAGCAAACTTGTCAATCCGTCGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: YPCVCHNHSGTR*PCSKLVNPSEL Trigger: GAGTTCCGACGGATTGACAAGTTTGCTACAGGGGCACCTGGTGCCCGAGTGATTGTGACAGACACATGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 72 bp | CGGATGACCACATTGGCTGCACTTCGGATTGGGGCGTaGAGCTTCTCACATAGTTCGCCATATTCTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: RMTTLAALRIGA*SFSHSSPYSDE Trigger: TTCATCAGAATATGGCGAACTATGTGAGAAGCTCCACGCCCCAATCCGAAGTGCAGCCAATGTGGTCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 72 bp | CCTGTAGCAAACTTGTCAATCCGTCGGAACTCTGTGTaGATGGAAGAAGCGACAGCCTGCCAACCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: PVANLSIRRNSV*MEEATACQPDC Trigger: ACAGTCTGGTTGGCAGGCTGTCGCTTCTTCCATCAACACAGAGTTCCGACGGATTGACAAGTTTGCTACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CAA 72 bp | ACAATCACTCGGGCACCAGGTGCCCCTGTAGCAAACTaGTCAATCCGTCGGAACTCTGTGTTGATGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: TITRAPGAPVAN*SIRRNSVLMEE Trigger: TTCTTCCATCAACACAGAGTTCCGACGGATTGACAAGTTTGCTACAGGGGCACCTGGTGCCCGAGTGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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| CDS CCA 72 bp | GAACATCCTGTTGCTGAGCCACATGTACACGGTATGTaGTCACCTTCATTACCCATGTGTCTGTCACAATCA | + |
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Preference number: 6 (lower is better) Translates to: EHPVAEPHVHGM*SPSLPMCLSQS Trigger: TGATTGTGACAGACACATGGGTAATGAAGGTGACCACATACCGTGTACATGTGGCTCAGCAACAGGATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019439.9 |
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