Pregenerated sensors for TMEM128 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067365Ensembl transcript IDs: ENSMUST00000087511.10, ENSMUST00000119047.8, ENSMUST00000142277.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGTCACAGTTTCTCCATGGAACAACTCACTGCGGAGACAGCAGTaGACACTGAGCTTCTCCTTCACGTCAGCCGACAAGCTGGACGCT | + |
|
Preference number: 1 (lower is better) Translates to: RVTVSPWNNSLRRQQ*TLSFSFTSADKLDA Trigger: AGCGTCCAGCTTGTCGGCTGACGTGAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTTCCATGGAGAAACTGTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACCTAGGTGAGCTGATGCTAGGAATGGAATaGAGGTCCTCCGCAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTSSVEAEVLDLLDLGELMLGME*RSSARG Trigger: TCCTCTTGCGGAGGACCTGCATTCCATTCCTAGCAT...CAGCTCACCTAGGTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACAGTGATCTTCACCAGTaGGCCATCTCTTCATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AHMCLTSSVEAEVLDLLDSDLHQ*AISSSP Trigger: TGGGGATGAAGAGATGGCTCACTGGTGAAGATCACT...GTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGCGCAAGAGGAGCCAGTaGTCTTCACCAGTGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IAHMCLTSSVEAEVLDLLRKRSQ*SSPVSH Trigger: ATGGCTCACTGGTGAAGATCACTGGCTCCTCTTGCG...CAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACCTAGGATGCTAGGAATGGAATaGAGGTCCTCCGCAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YVPDIICGGRGVRSPGPRMLGME*RSSARG Trigger: TCCTCTTGCGGAGGACCTGCATTCCATTCCTAGCAT...CCTAGGTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCGCAAGAGGAGCCAGTaGTCTTCACCAGTGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: MYSTYVPDIICGGRGVRSRKRSQ*SSPVSH Trigger: ATGGCTCACTGGTGAAGATCACTGGCTCCTCTTGCG...AGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTAGTGATCTTCACCAGTaGGCCATCTCTTCATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: MYSTYVPDIICGGRGVRSSDLHQ*AISSSP Trigger: TGGGGATGAAGAGATGGCTCACTGGTGAAGATCACT...AGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGATAAAACCCAGAGTAACAAGAAACCATAAGATACTTCCGTTTGGTCCTCTTCTGCGGAGACAGCAGTaGACACTGAGCTTCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: MIKPRVTRNHKILPFGPLLRRQQ*TLSFSF Trigger: GAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAG...AAGAGGACCAAACGGAAGTATCTTATGGTTTCTTGTTACTCTGGGTTTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| 3UTR TCA 72 bp | CATGGAACAACTCACTGCGGAGACAGCAGTGCACACTaGGCTTCTCCTTCACGTCAGCCGACAAGCTGGACG | + |
|
Preference number: 3 (lower is better) Translates to: HGTTHCGDSSAH*ASPSRQPTSWT Trigger: CGTCCAGCTTGTCGGCTGACGTGAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTTCCATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| 3UTR TCA 72 bp | AGGAATGGAATGCAGGTCCTCCGCAAGAGGAGCCAGTaGTCTTCACCAGTGAGCCATCTCTTCATCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNGMQVLRKRSQ*SSPVSHLFIPR Trigger: TCTGGGGATGAAGAGATGGCTCACTGGTGAAGATCACTGGCTCCTCTTGCGGAGGACCTGCATTCCATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| 3UTR GCA 72 bp | GTTTCTCCATGGAACAACTCACTGCGGAGACAGCAGTaGACACTGAGCTTCTCCTTCACGTCAGCCGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSPWNNSLRRQQ*TLSFSFTSADK Trigger: CTTGTCGGCTGACGTGAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTTCCATGGAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| 3UTR TCA 72 bp | GACAGGTTAACACTCGCTAGTTCTAACACAAACTGCTaGGAAGCAATCACTTGTTTTGAACAGCAGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DRLTLASSNTNC*EAITCFEQQRE Trigger: TTCTCTCTGCTGTTCAAAACAAGTGATTGCTTCTCAGCAGTTTGTGTTAGAACTAGCGAGTGTTAACCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS-3UTR TCA 90 bp | AACAACTCACTGCGGAGACAGCAGTGCACACTGAGCTTCTCCTTCACGTCAGCCCAAGGGAGTGAAAAATaGCCACACATTCCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNSLRRQQCTLSFSFTSAQGSEK*PHIPQS Trigger: GCTCTGTGGAATGTGTGGTCATTTTTCACTCCCTTG...GGCTGACGTGAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS-3UTR TCA 90 bp | CTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACCTAGGTGAGCTGACAGCAGCAAGGGAGTaGAAAATGACCACACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTSSVEAEVLDLLDLGELTAARE*KMTTHS Trigger: GGAATGTGTGGTCATTTTTCACTCCCTTGCTGCTGT...CAGCTCACCTAGGTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| CDS-3UTR TCA 90 bp | TATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTTCCACAGAGCCAGGTTaGAGCTCACAGTGGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSTYVPDIICGGRGVRSPSTEPG*SSQWQV Trigger: CACTTGCCACTGTGAGCTTCAACCTGGCTCTGTGGA...AGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS-3UTR GCA 90 bp | GCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACGGCGAAACAAATCCCTaGCGCAATGAAAGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHMCLTSSVEAEVLDLLDGETNP*RNESCS Trigger: ACTGCAACTTTCATTGCGGCAGGGATTTGTTTCGCC...GTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS-3UTR GCA 90 bp | TGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCTGGCAAGTGTCCAGCTaGAGGCGAAACAAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CIAHMCLTSSVEAEVLDLWQVSS*RRNKSL Trigger: CAGGGATTTGTTTCGCCTGCAGCTGGACACTTGCCA...GAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGAACAACTCACTGCGGAGACAGCAGTGCACACTGAGCTTCTCCTTCACGCCAGTGTTGGGTATTTaGCATCATATTCTTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PWNNSLRRQQCTLSFSFTPVLGI*HHILQS Trigger: GGATTGAAGAATATGATGTCAAATACCCAACACTGG...CGTGAAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTTCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS-3UTR TCA 90 bp | GCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACCCAGTGTTGGGTATTTaGCATCATATTCTTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHMCLTSSVEAEVLDLLDPVLGI*HHILQS Trigger: GGATTGAAGAATATGATGTCAAATACCCAACACTGG...GTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119047.8 |
||
| CDS-3UTR TCA 90 bp | TATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTCAAGGGAGTGAAAAATaGCCACACATTCCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSTYVPDIICGGRGVRSPQGSEK*PHIPQS Trigger: GCTCTGTGGAATGTGTGGTCATTTTTCACTCCCTTG...AGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| CDS-3UTR TCA 90 bp | TGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCAAGGGAGTGAAAAATaGCCACACATTCCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CIAHMCLTSSVEAEVLDLQGSEK*PHIPQS Trigger: GCTCTGTGGAATGTGTGGTCATTTTTCACTCCCTTG...GAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| CDS-3UTR TCA 90 bp | TGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCACAGCAGCAAGGGAGTaGAAAATGACCACACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIAHMCLTSSVEAEVLDLTAARE*KMTTHS Trigger: GGAATGTGTGGTCATTTTTCACTCCCTTGCTGCTGT...GAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119047.8 ENSMUST00000142277.2 |
||
| CDS-3UTR TCA 90 bp | TCGCTAGTTCTAACACAAACTGCTGAGAAGCAATCACTTGTTTTGAACAGCAGAACAGCAGCAAGGGAGTaGAAAATGACCACACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVLTQTAEKQSLVLNSRTAARE*KMTTHS Trigger: GGAATGTGTGGTCATTTTTCACTCCCTTGCTGCTGT...TCTGCTGTTCAAAACAAGTGATTGCTTCTCAGCAGTTTGTGTTAGAACTAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS CCA 90 bp | GAAGAGGTCGCTCCTTTTTCTCAACAGCTGTGGGTGTTTCCGGCTTaGCCTCGTCCTCGCAGTCCAGCTCTACTTCGGAAGGAAACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EEVAPFSQQLWVFPA*PRPRSPALLRKETG Trigger: ACCTGTTTCCTTCCGAAGTAGAGCTGGACTGCGAGGACGAGGCCAAGCCGGAAACACCCACAGCTGTTGAGAAAAAGGAGCGACCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS-3UTR CAA 90 bp | TATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGGACCTAGGTTCCACAGAGCCAGGTaGAAGCAAATCCCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YVPDIICGGRGVRSPGPRFHRAR*KQIPAA Trigger: TGCGGCAGGGATTTGCTTCAACCTGGCTCTGTGGAA...CCTAGGTCCAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119047.8 |
||
| CDS GCA 90 bp | GAAGCTCACAGTGGCAAGTGTCCAGCTGCAGGCGAAACAAATCCCTaGCGCAATGAAAGTTGCAGTTGTGATGGGCACCAGTGTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EAHSGKCPAAGETNP*RNESCSCDGHQCWV Trigger: TACCCAACACTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATTTGTTTCGCCTGCAGCTGGACACTTGCCACTGTGAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATGGAACAACTCACTGCGGAGACAGCAGTGCACACTGAGCTTCTCCTTTTCCACAGAGCCAGGTaGAAGCAAATCCCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSMEQLTAETAVHTELLLFHRAR*KQIPAA Trigger: TGCGGCAGGGATTTGCTTCAACCTGGCTCTGTGGAA...AAGGAGAAGCTCAGTGTGCACTGCTGTCTCCGCAGTGAGTTGTTCCATGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCCTGTTCCACAGAGCCAGGTaGAAGCTCACAGTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IAHMCLTSSVEAEVLDLLFHRAR*KLTVAS Trigger: ACTTGCCACTGTGAGCTTCAACCTGGCTCTGTGGAA...CAGGAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS GCA 90 bp | AAGTGTCCAGCTGCAGGCGAAACAAATCCCTGCCGCAATGAAAGTTaGAGTTGTGATGGGCACCAGTGTTGGGTATTTGACATCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: KCPAAGETNPCRNES*SCDGHQCWVFDIIF Trigger: GAATATGATGTCAAATACCCAACACTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATTTGTTTCGCCTGCAGCTGGACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS GCA 90 bp | ATTCCACAGAGCCAGGTTGAAGCAAATCCCTGCCGCAATGAAAGTTaGAGTTGTGATGGGCACCAGTGTTGGGTATTTGACATCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: IPQSQVEANPCRNES*SCDGHQCWVFDIIF Trigger: GAATATGATGTCAAATACCCAACACTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATTTGCTTCAACCTGGCTCTGTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS CCA 90 bp | AATCCCTGCCGCAATGAAAGTTGCAGTTGTGATGGGCACCAGTGTTaGGTATTTGACATCATATTCTTCAATCCCACGGTACCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NPCRNESCSCDGHQC*VFDIIFFNPTVPFQ Trigger: CTGGAATGGTACCGTGGGATTGAAGAATATGATGTCAAATACCCAACACTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS-3UTR CAA 90 bp | TGTATAGCACATATGTGCCTGACATCATCTGTGGAGGCCGAGGTGTTAGATCTCACCAGTGTTGGGTATTaGACATCATATTCTTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: CIAHMCLTSSVEAEVLDLTSVGY*TSYSSI Trigger: GATTGAAGAATATGATGTCAAATACCCAACACTGGT...GAGATCTAACACCTCGGCCTCCACAGATGATGTCAGGCACATATGTGCTATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119047.8 |
||
| CDS TCA 90 bp | GGTACCATTCCAGATAGACTATGCAGTAAAATGCAATTGACAGGCTaGCAAATAACAAGGCTCCGCCAAAGAGAAACCAACTATTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTIPDRLCSKMQLTG*QITRLRQRETNYWC Trigger: ACACCAATAGTTGGTTTCTCTTTGGCGGAGCCTTGTTATTTGTCAGCCTGTCAATTGCATTTTACTGCATAGTCTATCTGGAATGGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTAACACAAACTGCTGAGAAGCAATCACTTGTTTTGAACAGCAGAGAGAAAACCAGTGTTGGGTATTaGACATCATATTCTTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLTQTAEKQSLVLNSREKTSVGY*TSYSSI Trigger: GATTGAAGAATATGATGTCAAATACCCAACACTGGT...TTTCTCTCTGCTGTTCAAAACAAGTGATTGCTTCTCAGCAGTTTGTGTTAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087511.10 |
||
| CDS GCA 90 bp | TTTAAAGGTTTTAAAGAAGTCAACATAATAGGTCACAACGATGGATaGCAAAATCCAGAATCCAGAATGAATGTTAAGTCTTGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKGFKEVNIIGHNDG*QNPESRMNVKSWKR Trigger: CCTCTTCCAAGACTTAACATTCATTCTGGATTCTGGATTTTGGCATCCATCGTTGTGACCTATTATGTTGACTTCTTTAAAACCTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS CAA 90 bp | GGAAGAGGTCGCTCCTTTTTCTCAACAGCTGTGGGTGTTTCCGGCTaGGCCTCGTCCTCGCAGTCCAGCTCTACTTCGGAAGGAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRSFFSTAVGVSG*ASSSQSSSTSEGNR Trigger: CCTGTTTCCTTCCGAAGTAGAGCTGGACTGCGAGGACGAGGCCAAGCCGGAAACACCCACAGCTGTTGAGAAAAAGGAGCGACCTCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS CCA 72 bp | GTCTTGGAAGAGGTCGCTCCTTTTTCTCAACAGCTGTaGGTGTTTCCGGCTTGGCCTCGTCCTCGCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLEEVAPFSQQL*VFPAWPRPRSP Trigger: TGGACTGCGAGGACGAGGCCAAGCCGGAAACACCCACAGCTGTTGAGAAAAAGGAGCGACCTCTTCCAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS GCA 72 bp | AGTGGCAAGTGTCCAGCTGCAGGCGAAACAAATCCCTaGCGCAATGAAAGTTGCAGTTGTGATGGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGKCPAAGETNP*RNESCSCDGHQ Trigger: CTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATTTGTTTCGCCTGCAGCTGGACACTTGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142277.2 |
||
| CDS GCA 72 bp | CCACACATTCCACAGAGCCAGGTTGAAGCAAATCCCTaGCGCAATGAAAGTTGCAGTTGTGATGGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHIPQSQVEANP*RNESCSCDGHQ Trigger: CTGGTGCCCATCACAACTGCAACTTTCATTGCGGCAGGGATTTGCTTCAACCTGGCTCTGTGGAATGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||
| CDS CCA 72 bp | CGCAATGAAAGTTGCAGTTGTGATGGGCACCAGTGTTaGGTATTTGACATCATATTCTTCAATCCCACGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RNESCSCDGHQC*VFDIIFFNPTV Trigger: TACCGTGGGATTGAAGAATATGATGTCAAATACCCAACACTGGTGCCCATCACAACTGCAACTTTCATTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087511.10 ENSMUST00000119047.8 |
||