Pregenerated sensors for TMEM127 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034850Ensembl transcript IDs: ENSMUST00000035871.15, ENSMUST00000174288.2, ENSMUST00000174503.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTACAGCCAGGCCTGCACATCTGACAGGGCCCTGACACCAACCTaGTGGGCCTCTGGGTGGAGTACCTATGTGGAGAGTGGAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GYSQACTSDRALTPT*WASGWSTYVESGGS Trigger: GGACCCTCCACTCTCCACATAGGTACTCCACCCAGAGGCCCACCAGGTTGGTGTCAGGGCCCTGTCAGATGTGCAGGCCTGGCTGTAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | GGCCTCTGGGTGGAGTACCTATGTGGAGAGTGGAGGGTCCTGCCCTaGTTGGCCCCTGTCCCTGAACTGAGGCCAGGTTACATCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: GLWVEYLCGEWRVLP*LAPVPELRPGYISV Trigger: CACTGAGATGTAACCTGGCCTCAGTTCAGGGACAGGGGCCAAGCAGGGCAGGACCCTCCACTCTCCACATAGGTACTCCACCCAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | TTGACTCTGAAGGCTACAGCCAGGCCTGCACATCTGACAGGGCCCTaGCACCAACCTGGTGGGCCTCTGGGTGGAGTACCTATGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LTLKATARPAHLTGP*HQPGGPLGGVPMWR Trigger: TCTCCACATAGGTACTCCACCCAGAGGCCCACCAGGTTGGTGTCAGGGCCCTGTCAGATGTGCAGGCCTGGCTGTAGCCTTCAGAGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | AACCTGACCACTACTGCCATTCCCTCAGAGGGAACAGCCCCTCCCTaGAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: NLTTTAIPSEGTAPP*NALAHQPSSISFPP Trigger: AGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTCAGGGAGGGGCTGTTCCCTCTGAGGGAATGGCAGTAGTGGTCAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CTAGCTGTGGGCTTTGAGAACTTCCTCTGTGAAAGGTGCCAGGAGTaGGAGGCTCCCAAGGATCCAAATGTGCGTGGTGCAGGCGCATGC | + |
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Preference number: 1 (lower is better) Translates to: LAVGFENFLCERCQE*EAPKDPNVRGAGAC Trigger: GCATGCGCCTGCACCACGCACATTTGGATCCTTGGGAGCCTCCCACTCCTGGCACCTTTCACAGAGGAAGTTCTCAAAGCCCACAGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | GGGTCTGGGAAAATGGGAGAGTCATACTGGGGCACACTTTGGCATTaGAGCAGGGAACTCCAAGCAGATGCCTTCTTGTGGGCACGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GSGKMGESYWGTLWH*SRELQADAFLWARL Trigger: CAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTCCCAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CTTTCTTGCCTCCGAGAGGGGTCTGGGAAAATGGGAGAGTCATACTaGGGCACACTTTGGCATTGCAGCAGGGAACTCCAAGCAGATGCC | + |
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Preference number: 1 (lower is better) Translates to: LSCLREGSGKMGESY*GTLWHCSRELQADA Trigger: GGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTCCCAGACCCCTCTCGGAGGCAAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | CATAGTCCCTTCCCCTTGTGCTCTGTTGGTACCTCTCTCAGGGACTaGCCACTACCAGCAGCAACCCAAGGAAAGTCCCAGTCCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: HSPFPLCSVGTSLRD*PLPAATQGKSQSQR Trigger: TCTTTGGGACTGGGACTTTCCTTGGGTTGCTGCTGGTAGTGGTCAGTCCCTGAGAGAGGTACCAACAGAGCACAAGGGGAAGGGACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | TGGCATGCATGTTTGGTGCCTGATCTTCTGGCCTGCTCCCTCAGGTaGCATGTTAGAGAGAGCTGGCTACACACTTCAGCAACCTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: WHACLVPDLLACSLR*HVRESWLHTSATCQ Trigger: TTGGCAGGTTGCTGAAGTGTGTAGCCAGCTCTCTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | GAGATGCTCATAACGGAACAAGAACAGCTTGCCTACCTGGATCCATaGTGCAGGCCTCTCAGGTCTTACCTACCTTGTGCCCCAGATCAC | + |
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Preference number: 1 (lower is better) Translates to: EMLITEQEQLAYLDP*CRPLRSYLPCAPDH Trigger: GTGATCTGGGGCACAAGGTAGGTAAGACCTGAGAGGCCTGCAGCATGGATCCAGGTAGGCAAGCTGTTCTTGTTCCGTTATGAGCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | AAGGTGCCAGGAGTGGGAGGCTCCCAAGGATCCAAATGTGCGTGGTaGAGGCGCATGCCAAGTCCCTCCTCACTTTGTTTCATATTACAA | + |
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Preference number: 1 (lower is better) Translates to: KVPGVGGSQGSKCAW*RRMPSPSSLCFILQ Trigger: TTGTAATATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGATCCTTGGGAGCCTCCCACTCCTGGCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | AACGGTCCGCAGGATCAAGTCCTCATTCACTTTGGCATGCATGTTTaGTGCCTGATCTTCTGGCCTGCTCCCTCAGGTGCCATGTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: NGPQDQVLIHFGMHV*CLIFWPAPSGAMLE Trigger: CTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAATGAGGACTTGATCCTGCGGACCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | CCTCATTCACTTTGGCATGCATGTTTGGTGCCTGATCTTCTGGCCTaGTCCCTCAGGTGCCATGTTAGAGAGAGCTGGCTACACACTTCA | + |
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Preference number: 1 (lower is better) Translates to: PHSLWHACLVPDLLA*SLRCHVRESWLHTS Trigger: TGAAGTGTGTAGCCAGCTCTCTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAATGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | CTACTATATCTAGCTGTGGGCTTTGAGAACTTCCTCTGTGAAAGGTaGCAGGAGTGGGAGGCTCCCAAGGATCCAAATGTGCGTGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LLYLAVGFENFLCER*QEWEAPKDPNVRGA Trigger: TGCACCACGCACATTTGGATCCTTGGGAGCCTCCCACTCCTGGCACCTTTCACAGAGGAAGTTCTCAAAGCCCACAGCTAGATATAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | AGACATGGCCCACAGAGAGAGGAAACTTATCTGACCATCCCTGGTTaGAAGGAGCTAGTGAATAGGAAAGGAGCAGAGGGTACTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RHGPQREETYLTIPG*KELVNRKGAEGTGR Trigger: CCTCCCAGTACCCTCTGCTCCTTTCCTATTCACTAGCTCCTTCCAACCAGGGATGGTCAGATAAGTTTCCTCTCTCTGTGGGCCATGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | ACCACTACCAGCAGCAACCCAAGGAAAGTCCCAGTCCCAAAGACATaGCCCACAGAGAGAGGAAACTTATCTGACCATCCCTGGTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TTTSSNPRKVPVPKT*PTERGNLSDHPWLE Trigger: TTCCAACCAGGGATGGTCAGATAAGTTTCCTCTCTCTGTGGGCCATGTCTTTGGGACTGGGACTTTCCTTGGGTTGCTGCTGGTAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CTGGGCACTCTAGAAGGAATGAGGGTCAGCCCAGAGATACACAAGTaGCACAAATGCTGGGCCTGGCAAAGTGAACTTGCATGGCATAGT | + |
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Preference number: 1 (lower is better) Translates to: LGTLEGMRVSPEIHK*HKCWAWQSELAWHS Trigger: ACTATGCCATGCAAGTTCACTTTGCCAGGCCCAGCATTTGTGCCACTTGTGTATCTCTGGGCTGACCCTCATTCCTTCTAGAGTGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CAAGTCCTCATTCACTTTGGCATGCATGTTTGGTGCCTGATCTTCTaGCCTGCTCCCTCAGGTGCCATGTTAGAGAGAGCTGGCTACACA | + |
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Preference number: 1 (lower is better) Translates to: QVLIHFGMHVWCLIF*PAPSGAMLERAGYT Trigger: TGTGTAGCCAGCTCTCTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAATGAGGACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | CTCCAGAAAACCAGATCATGTATGAGGAGTGCCTGGAGACTAAAGTaGAGAGAATCCACAACGTGGACAACTGGGCCTGGGCACTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LQKTRSCMRSAWRLK*RESTTWTTGPGHSR Trigger: TCTAGAGTGCCCAGGCCCAGTTGTCCACGTTGTGGATTCTCTGCACTTTAGTCTCCAGGCACTCCTCATACATGATCTGGTTTTCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CTGGAAGAAGGAGCCAGGACAGAAAGCCTGCATACTGTTGGAAACTaGGAAGGCGTGACTATAGGCTCAGAGGGTGCTATGGTCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LEEGARTESLHTVGN*EGVTIGSEGAMVQN Trigger: ATTTTGGACCATAGCACCCTCTGAGCCTATAGTCACGCCTTCCCAGTTTCCAACAGTATGCAGGCTTTCTGTCCTGGCTCCTTCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | GGAGACTACTCATTTCACTGTTTCCTTGTGGCTGAGTCCATCTCCTaGGCTAAGGAAAGAATCCTAGGAGAGAGGTCCTGTCAGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: GDYSFHCFLVAESIS*AKERILGERSCQAL Trigger: GAGTGCCTGACAGGACCTCTCTCCTAGGATTCTTTCCTTAGCTCAGGAGATGGACTCAGCCACAAGGAAACAGTGAAATGAGTAGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CTGAAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTaGAAGACGTTGGTAATTTTTCTGGTTAGATCCAGCCTCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: LKCSRTPTQLHQLPT*KTLVIFLVRSSLPF Trigger: AAATGGGAGGCTGGATCTAACCAGAAAAATTACCAACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | GCATACTGTTGGAAACTGGGAAGGCGTGACTATAGGCTCAGAGGGTaGTATGGTCCAAAATATTGCAGAGCCATAAGGGATGGGCTACAT | + |
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Preference number: 1 (lower is better) Translates to: AYCWKLGRRDYRLRG*YGPKYCRAIRDGLH Trigger: ATGTAGCCCATCCCTTATGGCTCTGCAATATTTTGGACCATAGCACCCTCTGAGCCTATAGTCACGCCTTCCCAGTTTCCAACAGTATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | GTGATTCCTTCTCTCCAGAAAACCAGATCATGTATGAGGAGTGCCTaGAGACTAAAGTGCAGAGAATCCACAACGTGGACAACTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: VIPSLQKTRSCMRSA*RLKCRESTTWTTGP Trigger: AGGCCCAGTTGTCCACGTTGTGGATTCTCTGCACTTTAGTCTCCAGGCACTCCTCATACATGATCTGGTTTTCTGGAGAGAAGGAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | ACACTTTGGCATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTTGTaGGCACGCTTGGTCTTCATCTGCATAGGCATTTGTCCACATATT | + |
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Preference number: 1 (lower is better) Translates to: TLWHCSRELQADAFL*ARLVFICIGICPHI Trigger: AATATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | AGCAGATTCACCCAGATTGGAGTCATCTTCTCTGTATGTCCTGCCTaGGCTAGTTACAATGGTACTCCCACAAGAAAGGCACAGGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SRFTQIGVIFSVCPA*ASYNGTPTRKAQED Trigger: GTCTTCCTGTGCCTTTCTTGTGGGAGTACCATTGTAACTAGCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | GGCTTGGGTTTTCCCACTCAGTATAACGGACAAGCCAGTCCACTCTaGATCTCTTCTGAAGAAAGAGCCCCTATTCCAGGATTGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: GLGFPTQYNGQASPL*ISSEERAPIPGLKS Trigger: TGACTTCAATCCTGGAATAGGGGCTCTTTCTTCAGAAGAGATTCAGAGTGGACTGGCTTGTCCGTTATACTGAGTGGGAAAACCCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | GAACTCCAAGCAGATGCCTTCTTGTGGGCACGCTTGGTCTTCATCTaGATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: ELQADAFLWARLVFI*IGICPHIHHSFWPK Trigger: CTTTGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | AATGCTTTCACACACTTGGGGTCCAGTGTATGGGTTGAGAATGAATaGACTAAGACTGTGGGTAGCCATCAAGGTATCACCCATCAACTG | + |
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Preference number: 1 (lower is better) Translates to: NAFTHLGSSVWVENE*TKTVGSHQGITHQL Trigger: CAGTTGATGGGTGATACCTTGATGGCTACCCACAGTCTTAGTTCATTCATTCTCAACCCATACACTGGACCCCAAGTGTGTGAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | CTCTCTGCTGTCCTTACCCAACATAGCTCTCTTTTGAGGCACACTTaGGCTACAAGGTTGATCCCATCTTCTAGTGCATATGACAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LSAVLTQHSSLLRHT*ATRLIPSSSAYDKD Trigger: ATCCTTGTCATATGCACTAGAAGATGGGATCAACCTTGTAGCTCAAGTGTGCCTCAAAAGAGAGCTATGTTGGGTAAGGACAGCAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR TCA 90 bp | TGCCAAGTCCCTCCTCACTTTGTTTCATATTACAAGCTTCGTCAGTaGATGCCTTCTGCTTCTCTGGGAGGAAGAAAACAAACATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CQVPPHFVSYYKLRQ*MPSASLGGRKQTSG Trigger: TCCAGATGTTTGTTTTCTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAGGAGGGACTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | AATGAACTAAGACTGTGGGTAGCCATCAAGGTATCACCCATCAACTaGCTGGAAGAGCGACTCTGCAGGTCTTGCTCATTTTTATTTTCA | + |
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Preference number: 1 (lower is better) Translates to: NELRLWVAIKVSPIN*LEERLCRSCSFLFS Trigger: TGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATGGGTGATACCTTGATGGCTACCCACAGTCTTAGTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | GCTCAGAGGGTGCTATGGTCCAAAATATTGCAGAGCCATAAGGGATaGGCTACATTTCTGAACAACAACAGCCTTATCCCTATTTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AQRVLWSKILQSHKG*ATFLNNNSLIPILE Trigger: TTCTAAAATAGGGATAAGGCTGTTGTTGTTCAGAAATGTAGCCCATCCCTTATGGCTCTGCAATATTTTGGACCATAGCACCCTCTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR GCA 90 bp | AAGTCCCTCCTCACTTTGTTTCATATTACAAGCTTCGTCAGTGAATaGCTTCTGCTTCTCTGGGAGGAAGAAAACAAACATCTGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KSLLTLFHITSFVSE*LLLLWEEENKHLEN Trigger: ATTCTCCAGATGTTTGTTTTCTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAGGAGGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | CCATTCTTGTTCAAAATGTTTGTTGTCTTATGGGAGGGCAGAGATTaGAATTCATCTTCCCTTCAGCTAACACTAGACTATTACTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PFLFKMFVVLWEGRD*NSSSLQLTLDYYSR Trigger: TCTGGAGTAATAGTCTAGTGTTAGCTGAAGGGAAGATGAATTCCAATCTCTGCCCTCCCATAAGACAACAAACATTTTGAACAAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CCA 90 bp | TTGTTTCATATTACAAGCTTCGTCAGTGAATGCCTTCTGCTTCTCTaGGAGGAAGAAAACAAACATCTGGAGAATTGTAACAGAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: LFHITSFVSECLLLL*EEENKHLENCNRND Trigger: GTCATTTCTGTTACAATTCTCCAGATGTTTGTTTTCTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTGCTTGGCCCCTGTCCCTGAACTGAGGCCAGGTTACATCTCAGTGCCATGGGGGATGGGCTGCTaGGGAAGAGAGCCCCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPCLAPVPELRPGYISVPWGMGC*GREPRL Trigger: CAGCCGGGGCTCTCTTCCTCAGCAGCCCATCCCCCA...TGGCACTGAGATGTAACCTGGCCTCAGTTCAGGGACAGGGGCCAAGCAGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGAGCAGGGACACATGGACAAACCTAAAGGCAGAGTGTCTCCTGGGGAAGTGGGGGATGGGCTGCTaGGGAAGAGAGCCCCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQSRDTWTNLKAECLLGKWGMGC*GREPRL Trigger: CAGCCGGGGCTCTCTTCCTCAGCAGCCCATCCCCCA...CTTCCCCAGGAGACACTCTGCCTTTAGGTTTGTCCATGTGTCCCTGCTCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGACCAATGAGACCTGCTaGGGGAAGTGGCTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLGSLPQHLAVIILSSYQTNETC*GKWLLW Trigger: CCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGT...CTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR TCA 90 bp | GAAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTTCTTGGCCCCTGTCCCTaGACTGAGGCCAGGTTACAT | + |
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Preference number: 2 (lower is better) Translates to: EMLSHTNPAPSASHLEDVLGPCP*TEARLH Trigger: ATGTAACCTGGCCTCAGTTCAGGGACAGGGGCCAAG...AACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR TCA 90 bp | TCCAAATGTGCGTGGTGCAGGCGCATGCCAAGTCCCTCCTCACTTTGTTTCATACCAGGCCTGCACATCTaGCAGGGCCCTGACACCAAC | + |
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Preference number: 2 (lower is better) Translates to: SKCAWCRRMPSPSSLCFIPGLHI*QGPDTN Trigger: GTTGGTGTCAGGGCCCTGTCAGATGTGCAGGCCTGG...TATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTGCTTGGCCCCTGTCCCTGAACTGAGGCCAGGTTACATCTCAGTGCCAAAGCCTGCATACTGTTaGAAACTGGGAAGGCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LPCLAPVPELRPGYISVPKPAYC*KLGRRD Trigger: GTCACGCCTTCCCAGTTTCCAACAGTATGCAGGCTT...TGGCACTGAGATGTAACCTGGCCTCAGTTCAGGGACAGGGGCCAAGCAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 90 bp | GGGCACTCAGTCCCCTTCACTGGGGTCCTTGATAGGAGCAGTCTCTaGTCTGGTTCTGCTTCCTTGCCTGGTTCTAACCACAGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GHSVPFTGVLDRSSL*SGSASLPGSNHRKP Trigger: TGGCTTCCTGTGGTTAGAACCAGGCAAGGAAGCAGAACCAGACAAGAGACTGCTCCTATCAAGGACCCCAGTGAAGGGGACTGAGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCTTCTGCAGCTAATCAGGACATGCAGAGAGAGGCGGCTCAAGGTCTGTACCTCTCTCAGGGACTaGCCACTACCAGCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: TALLQLIRTCRERRLKVCTSLRD*PLPAAT Trigger: GGTTGCTGCTGGTAGTGGTCAGTCCCTGAGAGAGGT...ACAGACCTTGAGCCGCCTCTCTCTGCATGTCCTGATTAGCTGCAGAAGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR CCA 90 bp | TCCAAATGTGCGTGGTGCAGGCGCATGCCAAGTCCCTCCTCACTTTGTTTCATATGTGGCACTGGGGGATaGGCTGCTGAGGAAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SKCAWCRRMPSPSSLCFICGTGG*AAEEES Trigger: GCTCTCTTCCTCAGCAGCCCATCCCCCAGTGCCACA...TATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAGGCAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCCTATGTGGCACTGGGGGATaGGCTGCTGAGGAAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PKGRVSPGEDLVKMVRVLCGTGG*AAEEES Trigger: GCTCTCTTCCTCAGCAGCCCATCCCCCAGTGCCACA...TAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR CAA 90 bp | TTTAGCTCCTTGACTTTGTGCTCAGGCATCACCTGGCAGCCTTTCTaGCCTCCGAGAGGGGTCTGGGAAAATGGGAGAGTCATACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FSSLTLCSGITWQPF*PPRGVWENGRVILG Trigger: CCCCAGTATGACTCTCCCATTTTCCCAGACCCCTCTCGGAGGCAAGAAAGGCTGCCAGGTGATGCCTGAGCACAAAGTCAAGGAGCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTCTACCTCCCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTGGGTCCAGGACAGAAAGCCTaGATACTGTTGGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLYLPFSIFGKGTSPGLGPGQKA*ILLETG Trigger: CCCAGTTTCCAACAGTATGCAGGCTTTCTGTCCTGG...ACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGGGAGGTAGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | GGACACATGGACAAACCTAAAGGCAGAGTGTCTCCTGGGGAAGATTaGGTGAAGATGGTCAGGGTCCTACCAATGAGACCTGCTGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GHMDKPKGRVSPGED*VKMVRVLPMRPAGG Trigger: TCCCCCAGCAGGTCTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGGTTTGTCCATGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR CAA 90 bp | GAACGGTCCGCAGGATCAAGTCCTCATTCACTTTGGCATGCATGTTaGGTGCCTGATCTTCTGGCCTGCTCCCTCAGGTGCCATGTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: ERSAGSSPHSLWHAC*VPDLLACSLRCHVR Trigger: TCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAATGAGGACTTGATCCTGCGGACCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGAAAGAGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACCAATGAGACCTGCTaGGGGAAGTGGCTCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGKSTLYEIRVPALQSRDTNETC*GKWLLW Trigger: CCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGT...GTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR CAA 90 bp | GGCACACTTTGGCATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTaGTGGGCACGCTTGGTCTTCATCTGCATAGGCATTTGTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: GTLWHCSRELQADAF*WARLVFICIGICPH Trigger: ATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTCTACCTCCCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTGGGTCAAGCCAGTCCACTCTaGATCTCTTCTGAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLYLPFSIFGKGTSPGLGQASPL*ISSEER Trigger: TCTTTCTTCAGAAGAGATTCAGAGTGGACTGGCTTG...ACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGGGAGGTAGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGCGCTTGGTCTTCATCTaGATAGGCATTTGTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: FLGSLPQHLAVIILSSYQRLVFI*IGICPH Trigger: ATGTGGACAAATGCCTATGCAGATGAAGACCAAGCG...CTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAGCAGATTCACCCAGATTGGAGTCATCTTCTCTGTATGTCCTGCCTGAGCTTCCTCTGTGAAAGGTaGCAGGAGTGGGAGGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FKQIHPDWSHLLCMSCLSFLCER*QEWEAP Trigger: GGGAGCCTCCCACTCCTGGCACCTTTCACAGAGGAA...GCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTCTACCTCCCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTGGGTCCAGGGACCTTTATATaGCAAACTATCAGTGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLYLPFSIFGKGTSPGLGPGTFI*QTISVR Trigger: TCTGACACTGATAGTTTGTCATATAAAGGTCCCTGG...ACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGGGAGGTAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACATCCTACCAATGAGACCTaGTGGGGGAAGTGGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ERVHYMKSESRLCRAGTHPTNET*WGKWLL Trigger: GAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGG...ATGTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTCTTCATCTGCATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCATGGAGGGTCCTGCCCTaGTTGGCCCCTGTCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVFICIGICPHIHHSFWPWRVLP*LAPVPE Trigger: TTCAGGGACAGGGGCCAAGCAGGGCAGGACCCTCCA...TGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | AAATCACAAGGAACGGTCCGCAGGATCAAGTCCTCATTCACTTTGGCATGCATGCCCCTTGTGCTCTGTTaGTACCTCTCTCAGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: KSQGTVRRIKSSFTLACMPLVLC*YLSQGL Trigger: CAGTCCCTGAGAGAGGTACCAACAGAGCACAAGGGG...CATGCATGCCAAAGTGAATGAGGACTTGATCCTGCGGACCGTTCCTTGTGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTTTGTATGAGGAGTGCCTaGAGACTAAAGTGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EMLSHTNPAPSASHLEDVCMRSA*RLKCRE Trigger: TTCTCTGCACTTTAGTCTCCAGGCACTCCTCATACA...AACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR TCA 90 bp | GAACATGTATTGAGAAGATTATCAGTTTCCAGGAAAGACATGCATCCTGCTAGGCATCTGACAGGGCCCTaGCACCAACCTGGTGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: EHVLRRLSVSRKDMHPARHLTGP*HQPGGP Trigger: AGGCCCACCAGGTTGGTGTCAGGGCCCTGTCAGATG...CCTAGCAGGATGCATGTCTTTCCTGGAAACTGATAATCTTCTCAATACATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAGCAGATTCACCCAGATTGGAGTCATCTTCTCTGTATGTCCTGCCTGAGCCCAGAGATACACAAGTaGCACAAATGCTGGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FKQIHPDWSHLLCMSCLSPEIHK*HKCWAW Trigger: CCAGGCCCAGCATTTGTGCCACTTGTGTATCTCTGG...GCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAATGTGCGTGGTGCAGGCGCATGCCAAGTCCCTCCTCACTTTGTTTCATACTATCAGTGTCAGAATaGCAGGGAGAGGAGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKCAWCRRMPSPSSLCFILSVSE*QGEEEE Trigger: TTCTTCCTCCTCTCCCTGCCATTCTGACACTGATAG...TATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | CATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTTGTGGGCACGCTaGGTCTTCATCTGCATAGGCATTTGTCCACATATTCACCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HCSRELQADAFLWAR*VFICIGICPHIHHS Trigger: AGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | ATCCAAATGTGCGTGGTGCAGGCGCATGCCAAGTCCCTCCTCACTTaGTTTCATATTACAAGCTTCGTCAGTGAATGCCTTCTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IQMCVVQAHAKSLLT*FHITSFVSECLLLL Trigger: GAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAGCAGATTCACCCAGATTGGAGTCATCTTCTCTGTATGTCCTGCCTGAGCGCCTGGAGACTAAAGTaGAGAGAATCCACAACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FKQIHPDWSHLLCMSCLSAWRLK*RESTTW Trigger: CCACGTTGTGGATTCTCTGCACTTTAGTCTCCAGGC...GCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAGAGCCATAAGGGATGGGCTACATTTCTGAACAACAACAGCCTTATCCCTCCAGTCCCAAAGACATaGCCCACAGAGAGAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LQSHKGWATFLNNNSLIPPVPKT*PTERGN Trigger: GTTTCCTCTCTCTGTGGGCCATGTCTTTGGGACTGG...AGGGATAAGGCTGTTGTTGTTCAGAAATGTAGCCCATCCCTTATGGCTCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | AGTCATCTAGAGAGAATGACCTTTCCCCCAGATACAACAGCCACTTaGTGTTTTCAGAGGCCTCTCTCTGCTGTCCTTACCCAACATAGC | + |
|
Preference number: 2 (lower is better) Translates to: SHLERMTFPPDTTAT*CFQRPLSAVLTQHS Trigger: GCTATGTTGGGTAAGGACAGCAGAGAGAGGCCTCTGAAAACACAAAGTGGCTGTTGTATCTGGGGGAAAGGTCATTCTCTCTAGATGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | AAAATATTGCAGAGCCATAAGGGATGGGCTACATTTCTGAACAACAACAGCCTTCCTACCAATGAGACCTaGTGGGGGAAGTGGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KILQSHKGWATFLNNNSLPTNET*WGKWLL Trigger: GAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGG...AAGGCTGTTGTTGTTCAGAAATGTAGCCCATCCCTTATGGCTCTGCAATATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | CATCAACTGCCTGGAAGAGCGACTCTGCAGGTCTTGCTCATTTTTATTTTCAGGCAGAGCAGGGACACATaGACAAACCTAAAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HQLPGRATLQVLLIFIFRQSRDT*TNLKAE Trigger: CTCTGCCTTTAGGTTTGTCCATGTGTCCCTGCTCTG...CCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | CATCAACTGCCTGGAAGAGCGACTCTGCAGGTCTTGCTCATTTTTATTTTCAGGCTGACCATCCCTGGTTaGAAGGAGCTAGTGAATAGG | + |
|
Preference number: 2 (lower is better) Translates to: HQLPGRATLQVLLIFIFRLTIPG*KELVNR Trigger: CCTATTCACTAGCTCCTTCCAACCAGGGATGGTCAG...CCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTCTTCATCTGCATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCATACCTGGATCCATGCTaGAGGCCTCTCAGGTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LVFICIGICPHIHHSFWPYLDPC*RPLRSY Trigger: GTAAGACCTGAGAGGCCTGCAGCATGGATCCAGGTA...TGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CCA 90 bp | CATCAACTGCCTGGAAGAGCGACTCTGCAGGTCTTGCTCATTTTTATTTTCAGGATGACAGGCAGCCACTaGCATTTGCGTTCTCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: HQLPGRATLQVLLIFIFRMTGSH*HLRSHL Trigger: CAAATGAGAACGCAAATGCCAGTGGCTGCCTGTCAT...CCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR TCA 90 bp | GAACATGTATTGAGAAGATTATCAGTTTCCAGGAAAGACATGCATCCTGCTAGGGTACCAGCAGAGGTCTaGAACAGCTCTTCTGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EHVLRRLSVSRKDMHPARVPAEV*NSSSAA Trigger: AGCTGCAGAAGAGCTGTTTCAGACCTCTGCTGGTAC...CCTAGCAGGATGCATGTCTTTCCTGGAAACTGATAATCTTCTCAATACATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCTCATTTCAAGCAGATTCACCCAGATTGGAGTCATCTTCTCTGTATGTCCGGAGAACAGTTGCATTaGTCCCCAGCAGTGATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSHFKQIHPDWSHLLCMSGEQLH*SPAVIP Trigger: AGGAATCACTGCTGGGGAGCAATGCAACTGTTCTCC...GGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAAATGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | AAGCATTTCCCCACATCTCATAAGGAACTGACATCCCCAAAGAGTTaGTCTCATTTCAAGCAGATTCACCCAGATTGGAGTCATCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KHFPTSHKELTSPKS*SHFKQIHPDWSHLL Trigger: GAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAAATGAGACAAACTCTTTGGGGATGTCAGTTCCTTATGAGATGTGGGGAAATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCATCTGCATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCAAAGAATCTGGTTCTGCTTCCTTaGCTGGTTCTAACCACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FICIGICPHIHHSFWPKNLVLLP*LVLTTG Trigger: TCCTGTGGTTAGAACCAGGCAAGGAAGCAGAACCAG...ATTCTTTGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 90 bp | CACAGGTCAACAACTGTATTCATTCTCCATTCTTGTTCAAAATGTTaGTTGTCTTATGGGAGGGCAGAGATTGGAATTCATCTTCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HRSTTVFILHSCSKC*LSYGRAEIGIHLPF Trigger: GAAGGGAAGATGAATTCCAATCTCTGCCCTCCCATAAGACAACAAACATTTTGAACAAGAATGGAGAATGAATACAGTTGTTGACCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR TCA 90 bp | GAACATGTATTGAGAAGATTATCAGTTTCCAGGAAAGACATGCATCCTGCTAGGAAAGAGTACATTATATaGAATCAGAGTCCCGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EHVLRRLSVSRKDMHPARKEYII*NQSPGS Trigger: AGAGCCGGGACTCTGATTTCATATAATGTACTCTTT...CCTAGCAGGATGCATGTCTTTCCTGGAAACTGATAATCTTCTCAATACATGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CACCAACCTGGTGGGCCTCTGGGTGGAGTACCTATGTaGAGAGTGGAGGGTCCTGCCCTGCTTGGCCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQPGGPLGGVPM*RVEGPALLGPC Trigger: ACAGGGGCCAAGCAGGGCAGGACCCTCCACTCTCCACATAGGTACTCCACCCAGAGGCCCACCAGGTTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | ACTACTGCCATTCCCTCAGAGGGAACAGCCCCTCCCTaGAATGCTCTCGCACACCAACCCAGCTCCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTAIPSEGTAPP*NALAHQPSSIS Trigger: GCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTCAGGGAGGGGCTGTTCCCTCTGAGGGAATGGCAGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | GGAGTGGGAGGCTCCCAAGGATCCAAATGTGCGTGGTaGAGGCGCATGCCAAGTCCCTCCTCACTTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVGGSQGSKCAW*RRMPSPSSLCF Trigger: GAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCACATTTGGATCCTTGGGAGCCTCCCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCTACCTCCCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTGGGTATACTGGGGCACACTTaGGCATTGCAGCAGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GLYLPFSIFGKGTSPGLGILGHT*ALQQGT Trigger: AGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTAT...ACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGGGAGGTAGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | TTCCCCTTGTGCTCTGTTGGTACCTCTCTCAGGGACTaGCCACTACCAGCAGCAACCCAAGGAAAGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPLCSVGTSLRD*PLPAATQGKSQ Trigger: CTGGGACTTTCCTTGGGTTGCTGCTGGTAGTGGTCAGTCCCTGAGAGAGGTACCAACAGAGCACAAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CTCCGAGAGGGGTCTGGGAAAATGGGAGAGTCATACTaGGGCACACTTTGGCATTGCAGCAGGGAACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LREGSGKMGESY*GTLWHCSRELQ Trigger: TTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTCCCAGACCCCTCTCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | GGCTTTGAGAACTTCCTCTGTGAAAGGTGCCAGGAGTaGGAGGCTCCCAAGGATCCAAATGTGCGTGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFENFLCERCQE*EAPKDPNVRGA Trigger: TGCACCACGCACATTTGGATCCTTGGGAGCCTCCCACTCCTGGCACCTTTCACAGAGGAAGTTCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGGCCGCGACTCTGCAGGTCTaGCTCATTTTTATTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGSLPQHLAVIILSSYQAATLQV*LIFIFR Trigger: CCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGC...GGCCTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | TTGATAGGAGCAGTCTCTTGTCTGGTTCTGCTTCCTTaGCTGGTTCTAACCACAGGAAGCCAGGGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LIGAVSCLVLLP*LVLTTGSQGRA Trigger: TGCCCTGCCCTGGCTTCCTGTGGTTAGAACCAGGCAAGGAAGCAGAACCAGACAAGAGACTGCTCCTATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | TGTTTGGTGCCTGATCTTCTGGCCTGCTCCCTCAGGTaGCATGTTAGAGAGAGCTGGCTACACACTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLVPDLLACSLR*HVRESWLHTSA Trigger: TGCTGAAGTGTGTAGCCAGCTCTCTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | TGGCACAAATGCTGGGCCTGGCAAAGTGAACTTGCATaGCATAGTCCCTTCCCCTTGTGCTCTGTTGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: WHKCWAWQSELA*HSPFPLCSVGT Trigger: GGTACCAACAGAGCACAAGGGGAAGGGACTATGCCATGCAAGTTCACTTTGCCAGGCCCAGCATTTGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CAGGATCAAGTCCTCATTCACTTTGGCATGCATGTTTaGTGCCTGATCTTCTGGCCTGCTCCCTCAGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QDQVLIHFGMHV*CLIFWPAPSGA Trigger: GGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAATGAGGACTTGATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | AGCAGAGGGTACTGGGAGGGGAAAGAGTACATTATATaGAATCAGAGTCCCGGCTCTGCAGAGCAGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SRGYWEGKEYII*NQSPGSAEQGH Trigger: GTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTCCCCTCCCAGTACCCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR GCA 72 bp | ACCAGATCATGTATGAGGAGTGCCTGGAGACTAAAGTaGAGAGAATCCACAACGTGGACAACTGGGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TRSCMRSAWRLK*RESTTWTTGPG Trigger: CCCAGGCCCAGTTGTCCACGTTGTGGATTCTCTGCACTTTAGTCTCCAGGCACTCCTCATACATGATCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | ATAACGGAACAAGAACAGCTTGCCTACCTGGATCCATaGTGCAGGCCTCTCAGGTCTTACCTACCTTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ITEQEQLAYLDP*CRPLRSYLPCA Trigger: GGCACAAGGTAGGTAAGACCTGAGAGGCCTGCAGCATGGATCCAGGTAGGCAAGCTGTTCTTGTTCCGTTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | TACTCCAGAGATGCTCATAACGGAACAAGAACAGCTTaGCTACCTGGATCCATGCTGCAGGCCTCTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: YSRDAHNGTRTA*LPGSMLQASQV Trigger: GACCTGAGAGGCCTGCAGCATGGATCCAGGTAGGCAAGCTGTTCTTGTTCCGTTATGAGCATCTCTGGAGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | CACACTTTGGCATTGCAGCAGGGAACTCCAAGCAGATaGCTTCTTGTGGGCACGCTTGGTCTTCATCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTLALQQGTPSR*LLVGTLGLHLH Trigger: ATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | AGCAGCAACCCAAGGAAAGTCCCAGTCCCAAAGACATaGCCCACAGAGAGAGGAAACTTATCTGACCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSNPRKVPVPKT*PTERGNLSDHP Trigger: GGGATGGTCAGATAAGTTTCCTCTCTCTGTGGGCCATGTCTTTGGGACTGGGACTTTCCTTGGGTTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | TCTGGGAAAATGGGAGAGTCATACTGGGGCACACTTTaGCATTGCAGCAGGGAACTCCAAGCAGATGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGKMGESYWGTL*HCSRELQADAF Trigger: GAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGGAAAGAGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGTCTCCTGGGGAAGATTaGGTGAAGATGGTCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GGERVHYMKSESRLCRAGSPGED*VKMVRV Trigger: GACCCTGACCATCTTCACCAAATCTTCCCCAGGAGA...CCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTCCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTCCTATGGCTTCCCATTGCTTTGAGAAACATCAGATAGGCCTTCAGCGTTCCCCTTGTGCTCTGTaGGTACCTCTCTCAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: HPPMASHCFEKHQIGLQRSPCAL*VPLSGT Trigger: AGTCCCTGAGAGAGGTACCAACAGAGCACAAGGGGA...ACGCTGAAGGCCTATCTGATGTTTCTCAAAGCAATGGGAAGCCATAGGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTCTTCTGCAGCTAATCAGGACATGCAGAGAGAGGCGGCTCAAGGTCTGTTTTAGCTCCTTGACTTaGTGCTCAGGCATCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TALLQLIRTCRERRLKVCFSSLT*CSGITW Trigger: CCAGGTGATGCCTGAGCACAAAGTCAAGGAGCTAAA...ACAGACCTTGAGCCGCCTCTCTCTGCATGTCCTGATTAGCTGCAGAAGAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTTAAGTCCTCATTCACTTaGGCATGCATGTTTGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: EMLSHTNPAPSASHLEDVKSSFT*ACMFGA Trigger: GGCACCAAACATGCATGCCAAAGTGAATGAGGACTT...AACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGAGGGTACTGGGAGGGGAAAGAGTACATTATATGAAATCAGAGTCCCGTCTCCTGGGGAAGATTaGGTGAAGATGGTCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GAEGTGRGKSTLYEIRVPSPGED*VKMVRV Trigger: GACCCTGACCATCTTCACCAAATCTTCCCCAGGAGA...CGGGACTCTGATTTCATATAATGTACTCTTTCCCCTCCCAGTACCCTCTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTCCTATGGCTTCCCATTGCTTTGAGAAACATCAGATAGGCCTTCAGCGTCCTTCACTGGGGTCCTaGATAGGAGCAGTCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPPMASHCFEKHQIGLQRPSLGS*IGAVSC Trigger: ACAAGAGACTGCTCCTATCAAGGACCCCAGTGAAGG...ACGCTGAAGGCCTATCTGATGTTTCTCAAAGCAATGGGAAGCCATAGGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | ATGAGGGTCAGCCCAGAGATACACAAGTGGCACAAATaGTGGGCCTGGCAAAGTGAACTTGCATGGCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: MRVSPEIHKWHK*WAWQSELAWHS Trigger: ACTATGCCATGCAAGTTCACTTTGCCAGGCCCAGCATTTGTGCCACTTGTGTATCTCTGGGCTGACCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CTAGAAGGAATGAGGGTCAGCCCAGAGATACACAAGTaGCACAAATGCTGGGCCTGGCAAAGTGAACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LEGMRVSPEIHK*HKCWAWQSELA Trigger: TGCAAGTTCACTTTGCCAGGCCCAGCATTTGTGCCACTTGTGTATCTCTGGGCTGACCCTCATTCCTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTTGTaGGCACGCTTGGTCTTCATCTGCATAGGCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HCSRELQADAFL*ARLVFICIGIC Trigger: ACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | ATTCACTTTGGCATGCATGTTTGGTGCCTGATCTTCTaGCCTGCTCCCTCAGGTGCCATGTTAGAGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IHFGMHVWCLIF*PAPSGAMLERA Trigger: AGCTCTCTCTAACATGGCACCTGAGGGAGCAGGCCAGAAGATCAGGCACCAAACATGCATGCCAAAGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | TCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTaGAAGACGTTGGTAATTTTTCTGGTTAGATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRTPTQLHQLPT*KTLVIFLVRSS Trigger: GCTGGATCTAACCAGAAAAATTACCAACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTaGGTTTTCCCACTCAGTATAACGGACAAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSASLEKAPHQA*VFPLSITDKPV Trigger: GACTGGCTTGTCCGTTATACTGAGTGGGAAAACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | CCACAGAGAGAGGAAACTTATCTGACCATCCCTGGTTaGAAGGAGCTAGTGAATAGGAAAGGAGCAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PQREETYLTIPG*KELVNRKGAEG Trigger: ACCCTCTGCTCCTTTCCTATTCACTAGCTCCTTCCAACCAGGGATGGTCAGATAAGTTTCCTCTCTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | GGAAGAAAGGCCCAGGAACAGGAAGCTAGTAAAAAGTaGGTTCCAAATCACAAGGAACGGTCCGCAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GRKAQEQEASKK*VPNHKERSAGS Trigger: TGATCCTGCGGACCGTTCCTTGTGATTTGGAACCCACTTTTTACTAGCTTCCTGTTCCTGGGCCTTTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTCCTATGGCTTCCCATTGCTTTGAGAAACATCAGATAGGCCTTCAGCGTATGGGAGGGCAGAGATaGGAATTCATCTTCCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HPPMASHCFEKHQIGLQRMGGQR*EFIFPS Trigger: TGAAGGGAAGATGAATTCCAATCTCTGCCCTCCCAT...ACGCTGAAGGCCTATCTGATGTTTCTCAAAGCAATGGGAAGCCATAGGAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTCTTCTGCAGCTAATCAGGACATGCAGAGAGAGGCGGCTCAAGGTCTGTTGTTCAAAATGTTTGTaGTCTTATGGGAGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TALLQLIRTCRERRLKVCCSKCL*SYGRAE Trigger: CTCTGCCCTCCCATAAGACAACAAACATTTTGAACA...ACAGACCTTGAGCCGCCTCTCTCTGCATGTCCTGATTAGCTGCAGAAGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | AGGACATGCAGAGAGAGGCGGCTCAAGGTCTGTAGTTaGGATTTTGGGCAGAGCAACCTACTATATCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTCRERRLKVCS*DFGQSNLLYLA Trigger: AGCTAGATATAGTAGGTTGCTCTGCCCAAAATCTCAACTACAGACCTTGAGCCGCCTCTCTCTGCATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | ACACACTTGGGGTCCAGTGTATGGGTTGAGAATGAATaGACTAAGACTGTGGGTAGCCATCAAGGTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: THLGSSVWVENE*TKTVGSHQGIT Trigger: GGTGATACCTTGATGGCTACCCACAGTCTTAGTTCATTCATTCTCAACCCATACACTGGACCCCAAGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | TCATTTCACTGTTTCCTTGTGGCTGAGTCCATCTCCTaGGCTAAGGAAAGAATCCTAGGAGAGAGGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFHCFLVAESIS*AKERILGERSC Trigger: ACAGGACCTCTCTCCTAGGATTCTTTCCTTAGCTCAGGAGATGGACTCAGCCACAAGGAAACAGTGAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | ACCCAGATTGGAGTCATCTTCTCTGTATGTCCTGCCTaGGCTAGTTACAATGGTACTCCCACAAGAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TQIGVIFSVCPA*ASYNGTPTRKA Trigger: TGCCTTTCTTGTGGGAGTACCATTGTAACTAGCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | TTTCCCACTCAGTATAACGGACAAGCCAGTCCACTCTaGATCTCTTCTGAAGAAAGAGCCCCTATTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPTQYNGQASPL*ISSEERAPIPG Trigger: TCCTGGAATAGGGGCTCTTTCTTCAGAAGAGATTCAGAGTGGACTGGCTTGTCCGTTATACTGAGTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | GCAGATGCCTTCTTGTGGGCACGCTTGGTCTTCATCTaGATAGGCATTTGTCCACATATTCACCATTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ADAFLWARLVFI*IGICPHIHHSF Trigger: GAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | AAGGTATCACCCATCAACTGCCTGGAAGAGCGACTCTaGAGGTCTTGCTCATTTTTATTTTCAGGCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KVSPINCLEERL*RSCSFLFSGFS Trigger: GGAGAAGCCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATGGGTGATACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CCA 72 bp | TCTCTCCAGAAAACCAGATCATGTATGAGGAGTGCCTaGAGACTAAAGTGCAGAGAATCCACAACGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SLQKTRSCMRSA*RLKCRESTTWT Trigger: TGTCCACGTTGTGGATTCTCTGCACTTTAGTCTCCAGGCACTCCTCATACATGATCTGGTTTTCTGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GAACATGTATTGAGAAGATTATCAGTTTCCAGGAAAGACATGCATCCTGCTAGGCATAGTCCCTTCCCCTaGTGCTCTGTTGGTACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EHVLRRLSVSRKDMHPARHSPFP*CSVGTS Trigger: AGAGGTACCAACAGAGCACAAGGGGAAGGGACTATG...CCTAGCAGGATGCATGTCTTTCCTGGAAACTGATAATCTTCTCAATACATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | AAAATATTGCAGAGCCATAAGGGATGGGCTACATTTCTGAACAACAACAGCCTTAGGAGAACAGTTGCATaGCTCCCCAGCAGTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KILQSHKGWATFLNNNSLRRTVA*LPSSDS Trigger: GGAATCACTGCTGGGGAGCAATGCAACTGTTCTCCT...AAGGCTGTTGTTGTTCAGAAATGTAGCCCATCCCTTATGGCTCTGCAATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | GTCCTTACCCAACATAGCTCTCTTTTGAGGCACACTTaGGCTACAAGGTTGATCCCATCTTCTAGTGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: VLTQHSSLLRHT*ATRLIPSSSAY Trigger: ATATGCACTAGAAGATGGGATCAACCTTGTAGCTCAAGTGTGCCTCAAAAGAGAGCTATGTTGGGTAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCTGCATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCAAAGAATGATAGGAGCAGTCTCTaGTCTGGTTCTGCTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FICIGICPHIHHSFWPKNDRSSL*SGSASL Trigger: CAAGGAAGCAGAACCAGACAAGAGACTGCTCCTATC...ATTCTTTGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | CCTCCTCACTTTGTTTCATATTACAAGCTTCGTCAGTaGATGCCTTCTGCTTCTCTGGGAGGAAGAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PPHFVSYYKLRQ*MPSASLGGRKQ Trigger: TTGTTTTCTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | ATATTCACCATTCTTTCTGGCCAAAGAATGGCGAGTTaGCAGTCTTCTTGTAGTCACAGGTCAACAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IFTILSGQRMAS*QSSCSHRSTTV Trigger: TACAGTTGTTGACCTGTGACTACAAGAAGACTGTCAACTCGCCATTCTTTGGCCAGAAAGAATGGTGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR TCA 72 bp | TTGAAGTCAAGCATTTCCCCACATCTCATAAGGAACTaGCATCCCCAAAGAGTTTGTCTCATTTCAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKSSISPHLIRN*HPQRVCLISSR Trigger: TCTGCTTGAAATGAGACAAACTCTTTGGGGATGTCAGTTCCTTATGAGATGTGGGGAAATGCTTGACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR-3UTR CAA 90 bp | GAACATGTATTGAGAAGATTATCAGTTTCCAGGAAAGACATGCATCCTGCTAGGGGTCCAGTGTATGGGTaGAGAATGAATGAACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EHVLRRLSVSRKDMHPARGPVYG*RMNELR Trigger: TCTTAGTTCATTCATTCTCAACCCATACACTGGACC...CCTAGCAGGATGCATGTCTTTCCTGGAAACTGATAATCTTCTCAATACATGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR GCA 72 bp | CTCACTTTGTTTCATATTACAAGCTTCGTCAGTGAATaGCTTCTGCTTCTCTGGGAGGAAGAAAACAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LTLFHITSFVSE*LLLLWEEENKH Trigger: ATGTTTGTTTTCTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR CCA 90 bp | GTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTCCGCTCCGGCTGCTTaGGAAGAGCGCTGCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLPMRPAGGSGSSGCKRSSAPAA*EERCFP Trigger: CGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGA...GCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTGTGGCGCTGCTGGGCCAGGATaGGCTCAGAAGCCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMRPAGGSGSSGCKRSCGAAGPG*AQKPNR Trigger: CCTATTGGGCTTCTGAGCTCATCCTGGCCCAGCAGC...GCCACAGCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTGTGGCTGCAGTAGCCAGGATTaGGGCTCCACCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PMRPAGGSGSSGCKRSCGCSSQD*GSTSSC Trigger: GCAGGAGCTGGTGGAGCCTCAATCCTGGCTACTGCA...GCCACAGCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTGCTTGGCCCCTGTCCCTGAACTGAGGCCAGGTTACATCTCAGTGCCAGAACAGGTGCCTCCATaGATGTGCAACCAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPCLAPVPELRPGYISVPEQVPP*MCNQAG Trigger: GCCCGCTTGGTTGCACATCCATGGAGGCACCTGTTC...TGGCACTGAGATGTAACCTGGCCTCAGTTCAGGGACAGGGGCCAAGCAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAGCAGGGACACATGGACAAACCTAAAGGCAGAGTGTCTCCTGGGGAAGGAGACCCCCAGCTCCTaGCGGGAACAGGTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSRDTWTNLKAECLLGKETPSS*REQVPP Trigger: TGGAGGCACCTGTTCCCGCCAGGAGCTGGGGGTCTC...CTTCCCCAGGAGACACTCTGCCTTTAGGTTTGTCCATGTGTCCCTGCTCTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR TCA 90 bp | GGCCCACAGAGAGAGGAAACTTATCTGACCATCCCTGGTTGGAAGGAGCTAGTGCAGTGCACAGCGCTGTaGTGGACAGGGCGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPQREETYLTIPGWKELVQCTAL*WTGRQA Trigger: TGCCTGGCGCCCTGTCCATCACAGCGCTGTGCACTG...CACTAGCTCCTTCCAACCAGGGATGGTCAGATAAGTTTCCTCTCTCTGTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR GCA 90 bp | CCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTGTGGCCCGTGGTACTTCTTATaGTGTTGCTGCTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMRPAGGSGSSGCKRSCGPWYFL*CCCWAR Trigger: CCTGGCCCAGCAGCAACAGCATAAGAAGTACCACGG...GCCACAGCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCTACCTCCCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTTGGGTAGCAGAAAGCAGCGATaGCCCTCAGGAGCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLYLPFSIFGKGTSPGLGSRKQR*PSGAAL Trigger: CAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTGCT...ACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGGGAGGTAGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR GCA 90 bp | GTGAAGATGGTCAGGGTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGCTCCACCAGCTCCTaGCACCAAGTAGAAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKMVRVLPMRPAGGSGSSGSTSS*HQVEAN Trigger: GTTAGCTTCTACTTGGTGGCAGGAGCTGGTGGAGCC...AGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGACCCTGACCATCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGGCCTTATGCTGTTGCTGCTaGGCCAGGATGAGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLPQHLAVIILSSYQALCCCC*ARMSSE Trigger: TTCTGAGCTCATCCTGGCCCAGCAGCAACAGCATAA...GGCCTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGGCCTTCTTCTTCCTCTGTTaGGTAGTGGCGCAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSLPQHLAVIILSSYQAFFFLC*VVAQEV Trigger: AACCTCCTGCGCCACTACCCAACAGAGGAAGAAGAA...GGCCTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR TCA 90 bp | GTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCCACACTGTAGGACAGTaGGGATGTGAGCAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPMRPAGGSGSSGCKRSHTVGQ*GCEQRH Trigger: ATGCCTTTGCTCACATCCTCACTGTCCTACAGTGTG...GCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR TCA 90 bp | TCGCACACCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTTGGTAATTTTGCTGCTGGGCCAGGATaGGCTCAGAAGCCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTNPAPSASHLEDVGNFAAGPG*AQKPNR Trigger: CCTATTGGGCTTCTGAGCTCATCCTGGCCCAGCAGC...AAAATTACCAACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | GAAGATTTGGTGAAGATGGTCAGGGTCCTACCAATGAGACCTGCTGGGGGAAGTCCTGGCGGGAACAGGTaGCTCCATGGATGTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: EDLVKMVRVLPMRPAGGSPGGNR*LHGCAT Trigger: GGTTGCACATCCATGGAGGCACCTGTTCCCGCCAGG...ACTTCCCCCAGCAGGTCTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | CACTTTGGCATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTTGTGGGCACGCTCCGTGGTACTTCTTATaGTGTTGCTGCTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFGIAAGNSKQMPSCGHAPWYFL*CCCWAR Trigger: CCTGGCCCAGCAGCAACAGCATAAGAAGTACCACGG...AGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR CCA 90 bp | GTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTTCTTCTTCCTCTGTTaGGTAGTGGCGCAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLPMRPAGGSGSSGCKRSFFFLC*VVAQEV Trigger: AACCTCCTGCGCCACTACCCAACAGAGGAAGAAGAA...GCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CCA 90 bp | GTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCGGGGGTGGCTGGAATTaGTTGATGACCTCATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPMRPAGGSGSSGCKRSGGGWN*LMTSYS Trigger: AGAGTATGAGGTCATCAACCAATTCCAGCCACCCCC...GCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CCA 90 bp | GTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGAGGAGCTGTATAGGCAGGGGGTaGCTGGAATTGGTTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLPMRPAGGSGSSGCKRSCIGRG*LELVDD Trigger: GTCATCAACCAATTCCAGCCACCCCCTGCCTATACA...GCTCCTCTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR CAA 72 bp | CTTGATAGGAGCAGTCTCTTGTCTGGTTCTGCTTCCTaGCCTGGTTCTAACCACAGGAAGCCAGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRSSLLSGSAS*PGSNHRKPGQG Trigger: GCCCTGCCCTGGCTTCCTGTGGTTAGAACCAGGCAAGGAAGCAGAACCAGACAAGAGACTGCTCCTATCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | TTGACTTTGTGCTCAGGCATCACCTGGCAGCCTTTCTaGCCTCCGAGAGGGGTCTGGGAAAATGGGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLCSGITWQPF*PPRGVWENGRV Trigger: GACTCTCCCATTTTCCCAGACCCCTCTCGGAGGCAAGAAAGGCTGCCAGGTGATGCCTGAGCACAAAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCCTACCAATGAGAGCAGAAAGCAGCGATaGCCCTCAGGAGCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVSWGRFGEDGQGPTNESRKQR*PSGAAL Trigger: CAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTGCT...CTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR CAA 72 bp | AACTTGCATGGCATAGTCCCTTCCCCTTGTGCTCTGTaGGTACCTCTCTCAGGGACTGACCACTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHGIVPSPCAL*VPLSGTDHYQQ Trigger: CTGCTGGTAGTGGTCAGTCCCTGAGAGAGGTACCAACAGAGCACAAGGGGAAGGGACTATGCCATGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGCAGGGACACATGGACAAACCTAAAGGCAGAGTGTCTCCTGGGGAAGAGAGACTACACAGGATaGCCAGGAAGCAGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRDTWTNLKAECLLGKRDYTG*PGSRKQ Trigger: CTGCTTTCTGCTTCCTGGGCATCCTGTGTAGTCTCT...CTTCCCCAGGAGACACTCTGCCTTTAGGTTTGTCCATGTGTCCCTGCTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR CAA 72 bp | ACAAGTGGCACAAATGCTGGGCCTGGCAAAGTGAACTaGCATGGCATAGTCCCTTCCCCTTGTGCTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGTNAGPGKVN*HGIVPSPCALL Trigger: CAACAGAGCACAAGGGGAAGGGACTATGCCATGCAAGTTCACTTTGCCAGGCCCAGCATTTGTGCCACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 72 bp | TGGCATTGCAGCAGGGAACTCCAAGCAGATGCCTTCTaGTGGGCACGCTTGGTCTTCATCTGCATAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WHCSRELQADAF*WARLVFICIGI Trigger: AATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| 3UTR CAA 72 bp | GTCTGGGAAAATGGGAGAGTCATACTGGGGCACACTTaGGCATTGCAGCAGGGAACTCCAAGCAGATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWENGRVILGHT*ALQQGTPSRCL Trigger: AAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTCCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | AAACCTAAAGGCAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCGGCTCCACCAGCTCCTaGCACCAAGTAGAAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKGRVSPGEDLVKMVRVGSTSS*HQVEAN Trigger: GTTAGCTTCTACTTGGTGGCAGGAGCTGGTGGAGCC...GACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCCTACCAATGAGCACACTGTAGGACAGTaGGGATGTGAGCAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVSWGRFGEDGQGPTNEHTVGQ*GCEQRH Trigger: ATGCCTTTGCTCACATCCTCACTGTCCTACAGTGTG...CTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCCTACCAATGAGTACTTCTTATGCTGTTaGTGCTGGGCCAGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVSWGRFGEDGQGPTNEYFLCC*CWARMS Trigger: GCTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTA...CTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| 3UTR CAA 72 bp | GAAAATGGGAGAGTCATACTGGGGCACACTTTGGCATaGCAGCAGGGAACTCCAAGCAGATGCCTTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENGRVILGHTLA*QQGTPSRCLLV Trigger: CACAAGAAGGCATCTGCTTGGAGTTCCCTGCTGCAATGCCAAAGTGTGCCCCAGTATGACTCTCCCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | CCCTTCAGCATCTTTGGAAAAGGCACCTCACCAGGCTaGGGTTTTCCCACTCAGTATAACGGACAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIFGKGTSPG*GFPTQYNGQAS Trigger: ACTGGCTTGTCCGTTATACTGAGTGGGAAAACCCAAGCCTGGTGAGGTGCCTTTTCCAAAGATGCTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR TCA 90 bp | TTGGTCTTCATCTGCATAGGCATTTGTCCACATATTCACCATTCTTTCTGGCCATGCAGTAGCCAGGATTaGGGCTCCACCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFICIGICPHIHHSFWPCSSQD*GSTSSC Trigger: GCAGGAGCTGGTGGAGCCTCAATCCTGGCTACTGCA...TGGCCAGAAAGAATGGTGAATATGTGGACAAATGCCTATGCAGATGAAGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | GAAATGCTCTCGCACACCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTTCTGTCTGGGGGTTCATaGAGAAATCTTTTAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EMLSHTNPAPSASHLEDVLSGGS*RNLLAD Trigger: ATCTGCTAAAAGATTTCTGCATGAACCCCCAGACAG...AACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGGTGTGCGAGAGCATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | AAACCTAAAGGCAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCAGAGACTACACAGGATaGCCAGGAAGCAGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKGRVSPGEDLVKMVRVRDYTG*PGSRKQ Trigger: CTGCTTTCTGCTTCCTGGGCATCCTGTGTAGTCTCT...GACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR GCA 90 bp | AAACCTAAAGGCAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCTACTTCTTATGCTGTTaGTGCTGGGCCAGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPKGRVSPGEDLVKMVRVYFLCC*CWARMS Trigger: GCTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTA...GACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR CAA 72 bp | GACAAACCTAAAGGCAGAGTGTCTCCTGGGGAAGATTaGGTGAAGATGGTCAGGGTCCTACCAATGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: DKPKGRVSPGED*VKMVRVLPMRP Trigger: AGGTCTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGGTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR CAA 72 bp | TGCGTGGTGCAGGCGCATGCCAAGTCCCTCCTCACTTaGTTTCATATTACAAGCTTCGTCAGTGAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVVQAHAKSLLT*FHITSFVSECL Trigger: AAGGCATTCACTGACGAAGCTTGTAATATGAAACAAAGTGAGGAGGGACTTGGCATGCGCCTGCACCACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | CCAACCCAGCTCCATCAGCTTCCCACCTGGAAGACGTaGGTAATTTTTCTGGTTAGATCCAGCCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQLHQLPTWKT*VIFLVRSSLPF Trigger: AAATGGGAGGCTGGATCTAACCAGAAAAATTACCAACGTCTTCCAGGTGGGAAGCTGATGGAGCTGGGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | GAGAGAATGACCTTTCCCCCAGATACAACAGCCACTTaGTGTTTTCAGAGGCCTCTCTCTGCTGTCCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: ERMTFPPDTTAT*CFQRPLSAVLT Trigger: GGTAAGGACAGCAGAGAGAGGCCTCTGAAAACACAAAGTGGCTGTTGTATCTGGGGGAAAGGTCATTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR CCA 90 bp | AGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACATGGACAGGGGGTGGCTGGAATTaGTTGATGACCTCATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLYEIRVPALQSRDTWTGGGWN*LMTSYS Trigger: AGAGTATGAGGTCATCAACCAATTCCAGCCACCCCC...TGTCCATGTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CCA 90 bp | AGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACATGGACATGTATAGGCAGGGGGTaGCTGGAATTGGTTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: STLYEIRVPALQSRDTWTCIGRG*LELVDD Trigger: GTCATCAACCAATTCCAGCCACCCCCTGCCTATACA...TGTCCATGTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| 3UTR CAA 72 bp | AGGGAACTCCAAGCAGATGCCTTCTTGTGGGCACGCTaGGTCTTCATCTGCATAGGCATTTGTCCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: RELQADAFLWAR*VFICIGICPHI Trigger: AATATGTGGACAAATGCCTATGCAGATGAAGACCAAGCGTGCCCACAAGAAGGCATCTGCTTGGAGTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR CCA 90 bp | GAAAGAGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACATAGGAGCAGCACTGTCTaGGGGTTCATGCAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVHYMKSESRLCRAGTHRSSTV*GFMQKS Trigger: AGATTTCTGCATGAACCCCCAGACAGTGCTGCTCCT...ATGTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR GCA 90 bp | TGTTTCATATTACAAGCTTCGTCAGTGAATGCCTTCTGCTTCTCTGGGAGGAAGATCTTCAGAGCTGGATaGTTGGGCCCAAAGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: CFILQASSVNAFCFSGRKIFRAG*LGPKTS Trigger: GGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGAT...CTTCCTCCCAGAGAAGCAGAAGGCATTCACTGACGAAGCTTGTAATATGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | ACCCATCAACTGCCTGGAAGAGCGACTCTGCAGGTCTaGCTCATTTTTATTTTCAGGCTTCTCCCAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: THQLPGRATLQV*LIFIFRLLPVS Trigger: ACTTACTGGGAGAAGCCTGAAAATAAAAATGAGCAAGACCTGCAGAGTCGCTCTTCCAGGCAGTTGATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | AAAGAGTTTGTCTCATTTCAAGCAGATTCACCCAGATaGGAGTCATCTTCTCTGTATGTCCTGCCTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KEFVSFQADSPR*ESSSLYVLPEL Trigger: TAGCTCAGGCAGGACATACAGAGAAGATGACTCCAATCTGGGTGAATCTGCTTGAAATGAGACAAACTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | GTTCAAAATGTTTGTTGTCTTATGGGAGGGCAGAGATaGGAATTCATCTTCCCTTCAGCTAACACTAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: VQNVCCLMGGQR*EFIFPSANTRL Trigger: TAGTCTAGTGTTAGCTGAAGGGAAGATGAATTCCAATCTCTGCCCTCCCATAAGACAACAAACATTTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| 3UTR CAA 72 bp | GCACTCTATTTCTTTCATGGGGCTCATAATTTCATTTaGTGCATAATCCAATGGACCCTTCATATAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYFFHGAHNFI*CIIQWTLHISV Trigger: CACACTTATATGAAGGGTCCATTGGATTATGCACAAAATGAAATTATGAGCCCCATGAAAGAAATAGAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS CCA 90 bp | ACAGGGCGCCAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTGCTTaGGAAGAGCGCTGCTTCCCGGGCTTCTCCGCCGGCGCCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGRQAGPRPGSAPAA*EERCFPGFSAGALP Trigger: CGGGAGGGCGCCGGCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTGGCGCCCTGT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS GCA 90 bp | ATGGACAGGGCGCCAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTaGTTGGGAAGAGCGCTGCTTCCCGGGCTTCTCCGCCGGCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MDRAPGRAEARLRSG*LGRALLPGLLRRRP Trigger: AGGGCGCCGGCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTGGCGCCCTGTCCAT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
||
| CDS TCA 90 bp | GGATGTGCAACCAAGCGGGCTCCGCGAGGGCAGTGCACAGCGCTGTaGTGGACAGGGCGCCAGGCAGGGCCGAGGCCAGGCTCCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCATKRAPRGQCTAL*WTGRQAGPRPGSAP Trigger: CGGAGCGGAGCCTGGCCTCGGCCCTGCCTGGCGCCCTGTCCATCACAGCGCTGTGCACTGCCCTCGCGGAGCCCGCTTGGTTGCACATCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCTTCTGCAGCTAATCAGGACATGCAGAGAGAGGCGGCTCAAGGTCTGTCTCCGCTCCGGCTGCTaGGGAAGAGCGCTGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TALLQLIRTCRERRLKVCLRSGC*GRALLP Trigger: GGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAG...ACAGACCTTGAGCCGCCTCTCTCTGCATGTCCTGATTAGCTGCAGAAGAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS TCA 90 bp | CTCTGTTGGGTAGTGGCGCAGGAGGTTGGCTGCAGTAGCCAGGATTaGGGCTCCACCAGCTCCTGCCACCAAGTAGAAGCTAACAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCWVVAQEVGCSSQD*GSTSSCHQVEANSK Trigger: TTTGCTGTTAGCTTCTACTTGGTGGCAGGAGCTGGTGGAGCCTCAATCCTGGCTACTGCAGCCAACCTCCTGCGCCACTACCCAACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGGCCGGTGGCTGGAATTGGTaGATGACCTCATACTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSLPQHLAVIILSSYQAGGWNW*MTSYSA Trigger: AGCAGAGTATGAGGTCATCAACCAATTCCAGCCACC...GGCCTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR CAA 90 bp | GTCAGGGTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTGGGTGTAAGTTCAGAGCTGGATGCTaGGGCCCAAAGACATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRVLPMRPAGGSGSSGCKFRAGC*GPKTSK Trigger: TTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAA...CTTACACCCAGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGACCCTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGATGGTCAGGGTCCTACCAATGAGACCTGCTGGGGGAAGTGGCTCCTCTAGGGGGTGGCTGGAATaGGTTGATGACCTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: VKMVRVLPMRPAGGSGSSRGWLE*VDDLIL Trigger: GAGTATGAGGTCATCAACCAATTCCAGCCACCCCCT...AGAGGAGCCACTTCCCCCAGCAGGTCTCATTGGTAGGACCCTGACCATCTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
||
| CDS TCA 90 bp | ATGCAGAGAGACTACACAGGATGCCCAGGAAGCAGAAAGCAGCGATaGCCCTCAGGAGCAGCACTGTCTGGGGGTTCATGCAGAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: MQRDYTGCPGSRKQR*PSGAALSGGSCRNL Trigger: AAGATTTCTGCATGAACCCCCAGACAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTGCTTCCTGGGCATCCTGTGTAGTCTCTCTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
||
| CDS-3UTR CAA 90 bp | GGCCCACAGAGAGAGGAAACTTATCTGACCATCCCTGGTTGGAAGGAGCTAGTGGTACTTCTTATGCTGTaGCTGCTGGGCCAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: GPQREETYLTIPGWKELVVLLML*LLGQDE Trigger: CTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTAC...CACTAGCTCCTTCCAACCAGGGATGGTCAGATAAGTTTCCTCTCTCTGTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGCTCTCTACCCCAGCACCTGGCAGTGATCATTCTCTCCTCCTACCAGAAAGGTGACATAGACTaGGGAGCCGTGGTACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLGSLPQHLAVIILSSYQKGDID*GAVVLL Trigger: AAGAAGTACCACGGCTCCCAAGTCTATGTCACCTTT...CTGGTAGGAGGAGAGAATGATCACTGCCAGGTGCTGGGGTAGAGAGCCCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS-3UTR CAA 90 bp | GAAGATTTGGTGAAGATGGTCAGGGTCCTACCAATGAGACCTGCTGGGGGAAGTGTACTTCTTATGCTGTaGCTGCTGGGCCAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: EDLVKMVRVLPMRPAGGSVLLML*LLGQDE Trigger: CTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTAC...ACTTCCCCCAGCAGGTCTCATTGGTAGGACCCTGACCATCTTCACCAAATCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CAA 90 bp | CCTAAAGGCAGAGTGTCTCCTGGGGAAGATTTGGTGAAGATGGTCAGGGTCCTAGGTGGCTGGAATTGGTaGATGACCTCATACTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PKGRVSPGEDLVKMVRVLGGWNW*MTSYSA Trigger: AGCAGAGTATGAGGTCATCAACCAATTCCAGCCACC...TAGGACCCTGACCATCTTCACCAAATCTTCCCCAGGAGACACTCTGCCTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CAA 90 bp | AGGGGAAAGAGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACAGGGGGTGGCTGGAATaGGTTGATGACCTCATACTC | + |
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Preference number: 5 (lower is better) Translates to: RGKSTLYEIRVPALQSRDRGWLE*VDDLIL Trigger: GAGTATGAGGTCATCAACCAATTCCAGCCACCCCCT...GTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACTCTTTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGGGTACTGGGAGGGGAAAGAGTACATTATATGAAATCAGAGTCCCGTTCAGAGCTGGATGCTaGGGCCCAAAGACATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GAEGTGRGKSTLYEIRVPFRAGC*GPKTSK Trigger: TTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAA...CGGGACTCTGATTTCATATAATGTACTCTTTCCCCTCCCAGTACCCTCTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS CCA 90 bp | AGTGAGGATGTGAGCAAAGGCATACCGACGAGTAATCTTCAGAGCTaGATGCTTGGGCCCAAAGACATCCAAAAGGAATGCAGAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: SEDVSKGIPTSNLQS*MLGPKDIQKECRET Trigger: AGTCTCTCTGCATTCCTTTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGATTACTCGTCGGTATGCCTTTGCTCACATCCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS-3UTR CAA 90 bp | AGTACATTATATGAAATCAGAGTCCCGGCTCTGCAGAGCAGGGACACATGGACAAAAGGTGACATAGACTaGGGAGCCGTGGTACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: STLYEIRVPALQSRDTWTKGDID*GAVVLL Trigger: AAGAAGTACCACGGCTCCCAAGTCTATGTCACCTTT...TGTCCATGTGTCCCTGCTCTGCAGAGCCGGGACTCTGATTTCATATAATGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS CAA 90 bp | GACAGGGCGCCAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTGCTaGGGAAGAGCGCTGCTTCCCGGGCTTCTCCGCCGGCGCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: DRAPGRAEARLRSGC*GRALLPGLLRRRPP Trigger: GGGAGGGCGCCGGCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTGGCGCCCTGTC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS GCA 72 bp | GCGCCAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTaGTTGGGAAGAGCGCTGCTTCCCGGGCTTCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: APGRAEARLRSG*LGRALLPGLLR Trigger: GCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTGGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS CCA 72 bp | CAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTGCTTaGGAAGAGCGCTGCTTCCCGGGCTTCTCCGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: QAGPRPGSAPAA*EERCFPGFSAG Trigger: GCCGGCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS CAA 72 bp | CCAGGCAGGGCCGAGGCCAGGCTCCGCTCCGGCTGCTaGGGAAGAGCGCTGCTTCCCGGGCTTCTCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: PGRAEARLRSGC*GRALLPGLLRR Trigger: CCGGCGGAGAAGCCCGGGAAGCAGCGCTCTTCCCAAGCAGCCGGAGCGGAGCCTGGCCTCGGCCCTGCCTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS GCA 72 bp | CCCAGCTCCTGGCGGGAACAGGTGCCTCCATGGATGTaGAACCAAGCGGGCTCCGCGAGGGCAGTGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PSSWREQVPPWM*NQAGSARAVHS Trigger: GCTGTGCACTGCCCTCGCGGAGCCCGCTTGGTTGCACATCCATGGAGGCACCTGTTCCCGCCAGGAGCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS GCA 72 bp | GCACGTCCGAGACCCCCAGCTCCTGGCGGGAACAGGTaGCTCCATGGATGTGCAACCAAGCGGGCTCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: ARPRPPAPGGNR*LHGCATKRAPR Trigger: TCGCGGAGCCCGCTTGGTTGCACATCCATGGAGGCACCTGTTCCCGCCAGGAGCTGGGGGTCTCGGACGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174503.2 |
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| CDS TCA 72 bp | GTAGTGGCGCAGGAGGTTGGCTGCAGTAGCCAGGATTaGGGCTCCACCAGCTCCTGCCACCAAGTAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VVAQEVGCSSQD*GSTSSCHQVEA Trigger: AGCTTCTACTTGGTGGCAGGAGCTGGTGGAGCCTCAATCCTGGCTACTGCAGCCAACCTCCTGCGCCACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 ENSMUST00000174503.2 |
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| CDS TCA 72 bp | GACTACACAGGATGCCCAGGAAGCAGAAAGCAGCGATaGCCCTCAGGAGCAGCACTGTCTGGGGGTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: DYTGCPGSRKQR*PSGAALSGGSC Trigger: GCATGAACCCCCAGACAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTGCTTCCTGGGCATCCTGTGTAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS CCA 72 bp | CAGAAAGCAGCGATGACCCTCAGGAGCAGCACTGTCTaGGGGTTCATGCAGAAATCTTTTAGCAGATCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QKAAMTLRSSTV*GFMQKSFSRSG Trigger: CCCGGATCTGCTAAAAGATTTCTGCATGAACCCCCAGACAGTGCTGCTCCTGAGGGTCATCGCTGCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035871.15 |
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| CDS CAA 72 bp | GACATAGACTTGGGAGCCGTGGTACTTCTTATGCTGTaGCTGCTGGGCCAGGATGAGCTCAGAAGCCCAATA | + |
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Preference number: 6 (lower is better) Translates to: DIDLGAVVLLML*LLGQDELRSPI Trigger: TATTGGGCTTCTGAGCTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTACCACGGCTCCCAAGTCTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 ENSMUST00000174503.2 |
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| CDS CAA 90 bp | AGCAAAGGTGACATAGACTTGGGAGCCGTGGTACTTCTTATGCTGTaGCTGCTGGGCCAGGATGAGCTCAGAAGCCCAATAGGAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SKGDIDLGAVVLLML*LLGQDELRSPIGKA Trigger: GGCTTTTCCTATTGGGCTTCTGAGCTCATCCTGGCCCAGCAGCAACAGCATAAGAAGTACCACGGCTCCCAAGTCTATGTCACCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 ENSMUST00000174503.2 |
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| CDS TCA 72 bp | CCAATGACGGTAGCACACTGTAGGACAGTGAGGATGTaGGCAAAGGCATACCGACGAGTAATCTTCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PMTVAHCRTVRM*AKAYRRVIFRA Trigger: AGCTCTGAAGATTACTCGTCGGTATGCCTTTGCTCACATCCTCACTGTCCTACAGTGTGCTACCGTCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS GCA 72 bp | GCAAAGGCATACCGACGAGTAATCTTCAGAGCTGGATaGTTGGGCCCAAAGACATCCAAAAGGAATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AKAYRRVIFRAG*LGPKTSKRNAE Trigger: CTCTGCATTCCTTTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGATTACTCGTCGGTATGCCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS CCA 72 bp | GTGAGCAAAGGCATACCGACGAGTAATCTTCAGAGCTaGATGCTTGGGCCCAAAGACATCCAAAAGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: VSKGIPTSNLQS*MLGPKDIQKEC Trigger: GCATTCCTTTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGATTACTCGTCGGTATGCCTTTGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS CAA 72 bp | AAGGCATACCGACGAGTAATCTTCAGAGCTGGATGCTaGGGCCCAAAGACATCCAAAAGGAATGCAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KAYRRVIFRAGC*GPKTSKRNAER Trigger: TCTCTCTGCATTCCTTTTGGATGTCTTTGGGCCCAAGCATCCAGCTCTGAAGATTACTCGTCGGTATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 |
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| CDS CAA 72 bp | CACCAAGTAGAAGCTAACAGCAAAGGTGACATAGACTaGGGAGCCGTGGTACTTCTTATGCTGTTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HQVEANSKGDID*GAVVLLMLLLL Trigger: CAGCAGCAACAGCATAAGAAGTACCACGGCTCCCAAGTCTATGTCACCTTTGCTGTTAGCTTCTACTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035871.15 ENSMUST00000174288.2 ENSMUST00000174503.2 |
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