Pregenerated sensors for TMEM126A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030615Ensembl transcript IDs: ENSMUST00000136652.8
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CCCCCATTGACGGGTATAGCCAAAAGGATAGGGTACAGACCACCCATAACCAAACTAGTGCACCCCGTGTaGTGGTACAGGTTTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPLTGIAKRIGYRPPITKLVHPV*WYRFHS Trigger: ACTGTGAAACCTGTACCACAACACGGGGTGCACTAG...TTTGGTTATGGGTGGTCTGTACCCTATCCTTTTGGCTATACCCGTCAATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136652.8 |
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| CDS-3UTR CAA 90 bp | CCCCCATTGACGGGTATAGCCAAAAGGATAGGGTACAGACCACCCATAACCAAAGCCGAAATAGACTGTTaGCTATTAGGCCCCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPLTGIAKRIGYRPPITKAEIDC*LLGPQK Trigger: CTTTTGGGGGCCTAATAGCAAACAGTCTATTTCGGC...TTTGGTTATGGGTGGTCTGTACCCTATCCTTTTGGCTATACCCGTCAATGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000136652.8 |
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| CDS-3UTR CAA 90 bp | CCACCCATAACCAAACCAACTAGTGCACCCCGTGTTGTGGTACAGGTTTCACAGTTTGGTAGGACAGGTTaGCTGTCAAAAATGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PPITKPTSAPRVVVQVSQFGRTG*LSKMGS Trigger: TGATCCCATTTTTGACAGCAAACCTGTCCTACCAAA...CTGTGAAACCTGTACCACAACACGGGGTGCACTAGTTGGTTTGGTTATGGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136652.8 |
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