RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM125 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050854

Ensembl transcript IDs: ENSMUST00000060214.10, ENSMUST00000128098.8, ENSMUST00000150044.2, ENSMUST00000156191.2

Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTaGTCACTAGTGTCGTTGTGGATAGGCAACAGTCACCTCTGTGGA +
Preference number: 1 (lower is better)
Translates to: GSHFSQFSRESLSEE*SLVSLWIGNSHLCG
Trigger: TCCACAGAGGTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR TCA 90 bp CTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTaGAGAGTGATCACTAGTGTCGTTGTGGATAGGCAACAGTCACCT +
Preference number: 1 (lower is better)
Translates to: LIRKPFLSVFPRVTL*RVITSVVVDRQQSP
Trigger: AGGTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR CCA 90 bp ACAGTCACCTCTGTGGAGATCCTTGATGATGTCATAGGGCAAGGCTaGAGTTGTAGGGTCTTGGAAATATGGGTCAAGTCTTCAGAGACT +
Preference number: 1 (lower is better)
Translates to: TVTSVEILDDVIGQG*SCRVLEIWVKSSET
Trigger: AGTCTCTGAAGACTTGACCCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCACAGAGGTGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR GCA 90 bp AAACTGAGGCAGGAGTGTCTGAGTCACCTCTCACTGGCCCCAGCTGCTAGGTTATCACATATCATGAAATaGCATGGCGGGGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: KLRQECLSHLSLAPAARLSHIMK*HGGGGG
Trigger: GCCCCCACCCCCGCCATGGCATTTCATGATATGTGA...TAACCTAGCAGCTGGGGCCAGTGAGAGGTGACTCAGACACTCCTGCCTCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR GCA 90 bp AAGAAACTGAGGCAGGAGTGTCTGAGTCACCTCTCACTGGCCCCAGCTGCTAGGGCACCTGTGAATGTCTaGCACAAGTTCTGGGGATAC +
Preference number: 2 (lower is better)
Translates to: KKLRQECLSHLSLAPAARAPVNV*HKFWGY
Trigger: GTATCCCCAGAACTTGTGGCAGACATTCACAGGTGC...CCTAGCAGCTGGGGCCAGTGAGAGGTGACTCAGACACTCCTGCCTCAGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR TCA 90 bp TCCCCAGTCAGGTCCATCTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGGAGCATGACAGTCCATaGTACAAACAGCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SPVRSISSGSHFSQFSREEHDSP*YKQPQG
Trigger: TCCTTGGGGCTGTTTGTATCATGGACTGTCATGCTC...CTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAGATGGACCTGACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR TCA 90 bp ACAGTCACCTCTGTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTCTCATGGAATGGATATaGGGGTGCACACGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: TVTSVEILDDVIGQGWSCLMEWI*GCTRAP
Trigger: AGGAGCTCGTGTGCACCCTCATATCCATTCCATGAG...ACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCACAGAGGTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR CCA 90 bp GAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATAATGCCATGGCGGGGGTaGGGGCGACACACATATATG +
Preference number: 2 (lower is better)
Translates to: EILDDVIGQGWSCRVLEIMPWRG*GRHTYM
Trigger: CATATATGTGTGTCGCCCCCACCCCCGCCATGGCAT...TATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR-3UTR TCA 90 bp ATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATGGATATGCGTGCACCTGTaGATGTCTGCCACAAGTTCT +
Preference number: 2 (lower is better)
Translates to: ILDDVIGQGWSCRVLEIWICVHL*MSATSS
Trigger: AGAACTTGTGGCAGACATTCACAGGTGCACGCATAT...CCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR TCA 72 bp GAGACCCCAGGACCAGGCATAGAGCATGACAGTCCATaGTACAAACAGCCCCAAGGAGGTATCCCTCACCTT +
Preference number: 3 (lower is better)
Translates to: ETPGPGIEHDSP*YKQPQGGIPHL
Trigger: AAGGTGAGGGATACCTCCTTGGGGCTGTTTGTATCATGGACTGTCATGCTCTATGCCTGGTCCTGGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR CCA 72 bp GCACACGAGCTCCTAATCACATATCATGAAATGCCATaGCGGGGGTGGGGGCGACACACATATATGCGTGCA +
Preference number: 3 (lower is better)
Translates to: AHELLITYHEMP*RGWGRHTYMRA
Trigger: TGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGATTAGGAGCTCGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR CCA 72 bp CTCCTAATCACATATCATGAAATGCCATGGCGGGGGTaGGGGCGACACACATATATGCGTGCACCTGTGAAT +
Preference number: 3 (lower is better)
Translates to: LLITYHEMPWRG*GRHTYMRAPVN
Trigger: ATTCACAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGATTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR TCA 72 bp TTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTaGTCACTAGTGTCGTTGTGGATAGGCAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: FSQFSRESLSEE*SLVSLWIGNSH
Trigger: GTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR CCA 72 bp ATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATaGGTCAAGTCTTCAGAGACTCCAGATGAGTATCCT +
Preference number: 3 (lower is better)
Translates to: IGQGWSCRVLEI*VKSSETPDEYP
Trigger: AGGATACTCATCTGGAGTCTCTGAAGACTTGACCCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
3UTR TCA 72 bp AAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTaGAGAGTGATCACTAGTGTCGTTGTGGATAGGCAA +
Preference number: 3 (lower is better)
Translates to: KPFLSVFPRVTL*RVITSVVVDRQ
Trigger: TTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR CCA 90 bp ATCATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCACCTGCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACAC +
Preference number: 4 (lower is better)
Translates to: IMKCHGGGGGDTHICVHLRIGCW*RTAAPH
Trigger: GTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCG...CAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp TCTCACTGGCCCCAGCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAG +
Preference number: 4 (lower is better)
Translates to: SHWPQLLGYKLKGVSPVRRSKAT*WAWRMQ
Trigger: CTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCG...CCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGCTGGGGCCAGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp GTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAACTGGGGGCAGCCCCCTaGCCACTGAGGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VEILDDVIGQGWSCRVLELGAAP*PLRLAG
Trigger: CCCAGCAAGCCTCAGTGGGCAGGGGGCTGCCCCCAG...TTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR CCA 90 bp GCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGTCCATCTCATCCGGTGCCCACAGACAGCATaGCAGCCAGTGGCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: AARLQAQRCFPSQVHLIRCPQTA*QPVAVP
Trigger: CGGCACGGCCACTGGCTGCCATGCTGTCTGTGGGCA...CCGGATGAGATGGACCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR CCA 90 bp GCCACAAGTTCTGGGGATACTGAGGCAGGGCATGGGAAGAAGGGCTCCATCTCTGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCC +
Preference number: 4 (lower is better)
Translates to: ATSSGDTEAGHGKKGSISATCWA*RMQFIS
Trigger: GGATATGAACTGCATACGCCAGGCCCAGCACGTGGC...AGAGATGGAGCCCTTCTTCCCATGCCCTGCCTCAGTATCCCCAGAACTTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp GTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: VEILDDVIGQGWSCRVLEKERRG*WDHHSS
Trigger: GGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTT...TTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp CATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCACCTGTGATTTTGGGCGGAGAATaGCTCTGTACAGATCGGAGG +
Preference number: 4 (lower is better)
Translates to: HEMPWRGWGRHTYMRAPVILGGE*LCTDRR
Trigger: CCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAAT...CACAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR CCA 90 bp CCCCAGCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGTCCATCTCATGGCAATGCTGGAGGTaGTCTCATGACGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQLLGYKLKGVSPVRSISWQCWR*SHDAGQ
Trigger: CTGGCCAGCGTCATGAGACCACCTCCAGCATTGCCA...TGAGATGGACCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp CATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTGATATTCGCCGGATCGGCTaGTGGTGGAGGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: HPEAISLSFPESHSLKSDIRRIG*WWRTAA
Trigger: CGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAAT...ATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp ATCACATATCATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ITYHEMPWRGWGRHTYMRAGPGV*SSYPAR
Trigger: CCGTGCAGGATATGAACTGCATACGCCAGGCCCAGC...ACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR TCA 90 bp CATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTGATCCCCAGCAGCAAGACTaGGCCCAAGGAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HPEAISLSFPESHSLKSDPQQQD*AQGSQG
Trigger: ACCTTGGCTTCCTTGGGCTCAGTCTTGCTGCTGGGG...ATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR CCA 90 bp ACTCCAGATGAGTATCCTCTAGAGACCCCAGGACCAGGCATAGAGCATGACAGTTCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TPDEYPLETPGPGIEHDSSPWPF*AENASV
Trigger: TACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGA...ACTGTCATGCTCTATGCCTGGTCCTGGGGTCTCTAGAGGATACTCATCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR TCA 90 bp TCCCCAGTCAGGTCCATCTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: SPVRSISSGSHFSQFSRERRQLS*DAKDAT
Trigger: AGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCT...CTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAGATGGACCTGACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS-3UTR GCA 90 bp ATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATGGATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: ILDDVIGQGWSCRVLEIWMQFIS*TAELIS
Trigger: GCTGATGAGCTCTGCCGTGCAGGATATGAACTGCAT...CCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS GCA 90 bp GACAGAGCACAGTGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTaGTGGTGGAGGACAGCAGCGCCACACCACCGGCCCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: DRAQCPRLVAIRRIG*WWRTAAPHHRPHSQ
Trigger: CTGGCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGCTCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 90 bp GCACAGTGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACACCACCGGCCCCACAGCCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: AQCPRLVAIRRIGCW*RTAAPHHRPHSQPQ
Trigger: TTGTGGCTGGCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
CDS CCA 90 bp GCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASAPPPLRSKATCWA*RMQFISCTAELISC
Trigger: GCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 90 bp ACTACAACAGCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: TTTASAPPPLRSKAT*WAWRMQFISCTAEL
Trigger: GAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGCTGTTGTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 90 bp ACAACAGCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTaGGCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: TTASAPPPLRSKATC*AWRMQFISCTAELI
Trigger: GATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGCTGTTGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 90 bp TCAGCTGCTTCACCAGAACCAGCAGGGCCAGCAGACAGAGCACAGTaGCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SAASPEPAGPADRAQ*PRLVAIRRIGCWWR
Trigger: CCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGCTCTGTCTGCTGGCCCTGCTGGTTCTGGTGAAGCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 90 bp CGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGGCAGAGCTCATCAGCTGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: RLRRCAARPRAGPGV*SSYPARQSSSAASP
Trigger: TGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 90 bp AGGATCACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTGCTaGGACCACCATAGCTCCACCTGCTCTGCCAGCACATCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RITATEKQSKERRGC*DHHSSTCSASTSGG
Trigger: GCCCCCAGATGTGCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGTGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
ENSMUST00000156191.2
CDS GCA 90 bp ACAAGGATCACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCCACCTGCTCTGCCAGCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: TRITATEKQSKERRG*WDHHSSTCSASTSG
Trigger: CCCAGATGTGCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGTGATCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
ENSMUST00000156191.2
CDS GCA 90 bp CGCAGCAAGGCCACGTGCTGGGCCTGGCGTATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGCTGCTTCACCAGAACCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RSKATCWAWRMQFIS*TAELISCFTRTSRA
Trigger: GGCCCTGCTGGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 90 bp GCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATCAGCTaGTTCACCAGAACCAGCAGGGCCAGCAGACAGAGCACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: AWRMQFISCTAELIS*FTRTSRASRQSTVP
Trigger: GGGCACTGTGCTCTGTCTGCTGGCCCTGCTGGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 90 bp AATGCCTCTGTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTaGTACAGTAGCAACCCCAGCAGCAAGACTGAGCCCAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: NASVQIGGQCPLTPT*YSSNPSSKTEPKEA
Trigger: GGCTTCCTTGGGCTCAGTCTTGCTGCTGGGGTTGCTACTGTACCAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTACAGAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS GCA 90 bp GCTAAAGATGCTACTGTTATCACCGTGGCCATTTTGGGCGGAGAATaGCTCTGTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTG +
Preference number: 5 (lower is better)
Translates to: AKDATVITVAILGGE*LCTDRRAVSTHTHL
Trigger: CAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CCA 90 bp TGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAGTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: CPEMLKMLLLSPWPF*AENASVQIGGQCPL
Trigger: GAGTGGACACTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS TCA 90 bp AATGCTGGAGGTGGTCTCATGACGCTGGCCAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTGGGC +
Preference number: 5 (lower is better)
Translates to: NAGGGLMTLARRQLS*DAKDATVITVAILG
Trigger: GCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCTGGCCAGCGTCATGAGACCACCTCCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CCA 90 bp GAAGACAACTGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTaGCCATTTTGGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EDNCPEMLKMLLLSP*PFWAENASVQIGGQ
Trigger: CTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CCA 72 bp CCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACACCACCGGCCCCACAGC +
Preference number: 6 (lower is better)
Translates to: PRLVAIRRIGCW*RTAAPHHRPHS
Trigger: GCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
CDS CCA 72 bp TGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTaGTGGAGGACAGCAGCGCCACACCACCGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: CPRLVAIRRIGC*WRTAAPHHRPH
Trigger: GTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
CDS GCA 72 bp GCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAGTTCATATCCTGCACG +
Preference number: 6 (lower is better)
Translates to: ASAPPPLRSKAT*WAWRMQFISCT
Trigger: CGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 72 bp TCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTaGGCCTGGCGTATGCAGTTCATATCCTGCACGGCA +
Preference number: 6 (lower is better)
Translates to: SAPPPLRSKATC*AWRMQFISCTA
Trigger: TGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 72 bp CCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCCTGCACGGCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: PPPLRSKATCWA*RMQFISCTAEL
Trigger: GAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 72 bp ACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCCACCTGCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: TATEKQSKERRG*WDHHSSTCSAS
Trigger: GCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
ENSMUST00000150044.2
ENSMUST00000156191.2
CDS GCA 72 bp CGCTGCGCAGCAAGGCCACGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGGCAGAGCTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: RCAARPRAGPGV*SSYPARQSSSA
Trigger: AGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS GCA 72 bp GCCACGTGCTGGGCCTGGCGTATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGCTGCTTCACCAGAACC +
Preference number: 6 (lower is better)
Translates to: ATCWAWRMQFIS*TAELISCFTRT
Trigger: GGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060214.10
ENSMUST00000128098.8
CDS CCA 72 bp GTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTaGTACAGTAGCAACCCCAGCAGCAAGACTGAGCCC +
Preference number: 6 (lower is better)
Translates to: VQIGGQCPLTPT*YSSNPSSKTEP
Trigger: GGGCTCAGTCTTGCTGCTGGGGTTGCTACTGTACCAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS TCA 72 bp GGTGGTCTCATGACGCTGGCCAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACTGTTATCACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: GGLMTLARRQLS*DAKDATVITVA
Trigger: GGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCTGGCCAGCGTCATGAGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CCA 72 bp ATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: MLKMLLLSPWPF*AENASVQIGGQ
Trigger: CTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CAA 72 bp GATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTaGGGCGGAGAATGCCTCTGTACAGATCGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: DAKDATVITVAI*GGECLCTDRRA
Trigger: TGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10
CDS CCA 72 bp TGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTaGCCATTTTGGGCGGAGAATGCCTCTGTACAGATC +
Preference number: 6 (lower is better)
Translates to: CPEMLKMLLLSP*PFWAENASVQI
Trigger: GATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060214.10