Pregenerated sensors for TMEM125 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050854Ensembl transcript IDs: ENSMUST00000060214.10, ENSMUST00000128098.8, ENSMUST00000150044.2, ENSMUST00000156191.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTaGTCACTAGTGTCGTTGTGGATAGGCAACAGTCACCTCTGTGGA | + |
Preference number: 1 (lower is better) Translates to: GSHFSQFSRESLSEE*SLVSLWIGNSHLCG Trigger: TCCACAGAGGTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR TCA 90 bp | CTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTaGAGAGTGATCACTAGTGTCGTTGTGGATAGGCAACAGTCACCT | + |
Preference number: 1 (lower is better) Translates to: LIRKPFLSVFPRVTL*RVITSVVVDRQQSP Trigger: AGGTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR CCA 90 bp | ACAGTCACCTCTGTGGAGATCCTTGATGATGTCATAGGGCAAGGCTaGAGTTGTAGGGTCTTGGAAATATGGGTCAAGTCTTCAGAGACT | + |
Preference number: 1 (lower is better) Translates to: TVTSVEILDDVIGQG*SCRVLEIWVKSSET Trigger: AGTCTCTGAAGACTTGACCCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCACAGAGGTGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR GCA 90 bp | AAACTGAGGCAGGAGTGTCTGAGTCACCTCTCACTGGCCCCAGCTGCTAGGTTATCACATATCATGAAATaGCATGGCGGGGGTGGGGGC | + |
Preference number: 2 (lower is better) Translates to: KLRQECLSHLSLAPAARLSHIMK*HGGGGG Trigger: GCCCCCACCCCCGCCATGGCATTTCATGATATGTGA...TAACCTAGCAGCTGGGGCCAGTGAGAGGTGACTCAGACACTCCTGCCTCAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR GCA 90 bp | AAGAAACTGAGGCAGGAGTGTCTGAGTCACCTCTCACTGGCCCCAGCTGCTAGGGCACCTGTGAATGTCTaGCACAAGTTCTGGGGATAC | + |
Preference number: 2 (lower is better) Translates to: KKLRQECLSHLSLAPAARAPVNV*HKFWGY Trigger: GTATCCCCAGAACTTGTGGCAGACATTCACAGGTGC...CCTAGCAGCTGGGGCCAGTGAGAGGTGACTCAGACACTCCTGCCTCAGTTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR TCA 90 bp | TCCCCAGTCAGGTCCATCTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGGAGCATGACAGTCCATaGTACAAACAGCCCCAAGGA | + |
Preference number: 2 (lower is better) Translates to: SPVRSISSGSHFSQFSREEHDSP*YKQPQG Trigger: TCCTTGGGGCTGTTTGTATCATGGACTGTCATGCTC...CTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAGATGGACCTGACTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR TCA 90 bp | ACAGTCACCTCTGTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTCTCATGGAATGGATATaGGGGTGCACACGAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: TVTSVEILDDVIGQGWSCLMEWI*GCTRAP Trigger: AGGAGCTCGTGTGCACCCTCATATCCATTCCATGAG...ACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCACAGAGGTGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR CCA 90 bp | GAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATAATGCCATGGCGGGGGTaGGGGCGACACACATATATG | + |
Preference number: 2 (lower is better) Translates to: EILDDVIGQGWSCRVLEIMPWRG*GRHTYM Trigger: CATATATGTGTGTCGCCCCCACCCCCGCCATGGCAT...TATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR-3UTR TCA 90 bp | ATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATGGATATGCGTGCACCTGTaGATGTCTGCCACAAGTTCT | + |
Preference number: 2 (lower is better) Translates to: ILDDVIGQGWSCRVLEIWICVHL*MSATSS Trigger: AGAACTTGTGGCAGACATTCACAGGTGCACGCATAT...CCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR TCA 72 bp | GAGACCCCAGGACCAGGCATAGAGCATGACAGTCCATaGTACAAACAGCCCCAAGGAGGTATCCCTCACCTT | + |
Preference number: 3 (lower is better) Translates to: ETPGPGIEHDSP*YKQPQGGIPHL Trigger: AAGGTGAGGGATACCTCCTTGGGGCTGTTTGTATCATGGACTGTCATGCTCTATGCCTGGTCCTGGGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR CCA 72 bp | GCACACGAGCTCCTAATCACATATCATGAAATGCCATaGCGGGGGTGGGGGCGACACACATATATGCGTGCA | + |
Preference number: 3 (lower is better) Translates to: AHELLITYHEMP*RGWGRHTYMRA Trigger: TGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGATTAGGAGCTCGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR CCA 72 bp | CTCCTAATCACATATCATGAAATGCCATGGCGGGGGTaGGGGCGACACACATATATGCGTGCACCTGTGAAT | + |
Preference number: 3 (lower is better) Translates to: LLITYHEMPWRG*GRHTYMRAPVN Trigger: ATTCACAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGATTAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR TCA 72 bp | TTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTaGTCACTAGTGTCGTTGTGGATAGGCAACAGTCAC | + |
Preference number: 3 (lower is better) Translates to: FSQFSRESLSEE*SLVSLWIGNSH Trigger: GTGACTGTTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR CCA 72 bp | ATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATaGGTCAAGTCTTCAGAGACTCCAGATGAGTATCCT | + |
Preference number: 3 (lower is better) Translates to: IGQGWSCRVLEI*VKSSETPDEYP Trigger: AGGATACTCATCTGGAGTCTCTGAAGACTTGACCCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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3UTR TCA 72 bp | AAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTaGAGAGTGATCACTAGTGTCGTTGTGGATAGGCAA | + |
Preference number: 3 (lower is better) Translates to: KPFLSVFPRVTL*RVITSVVVDRQ Trigger: TTGCCTATCCACAACGACACTAGTGATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR CCA 90 bp | ATCATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCACCTGCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACAC | + |
Preference number: 4 (lower is better) Translates to: IMKCHGGGGGDTHICVHLRIGCW*RTAAPH Trigger: GTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCG...CAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | TCTCACTGGCCCCAGCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAG | + |
Preference number: 4 (lower is better) Translates to: SHWPQLLGYKLKGVSPVRRSKAT*WAWRMQ Trigger: CTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCG...CCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGCTGGGGCCAGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | GTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAACTGGGGGCAGCCCCCTaGCCACTGAGGCTTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: VEILDDVIGQGWSCRVLELGAAP*PLRLAG Trigger: CCCAGCAAGCCTCAGTGGGCAGGGGGCTGCCCCCAG...TTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR CCA 90 bp | GCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGTCCATCTCATCCGGTGCCCACAGACAGCATaGCAGCCAGTGGCCGTGCCG | + |
Preference number: 4 (lower is better) Translates to: AARLQAQRCFPSQVHLIRCPQTA*QPVAVP Trigger: CGGCACGGCCACTGGCTGCCATGCTGTCTGTGGGCA...CCGGATGAGATGGACCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTCTGGGGATACTGAGGCAGGGCATGGGAAGAAGGGCTCCATCTCTGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCC | + |
Preference number: 4 (lower is better) Translates to: ATSSGDTEAGHGKKGSISATCWA*RMQFIS Trigger: GGATATGAACTGCATACGCCAGGCCCAGCACGTGGC...AGAGATGGAGCCCTTCTTCCCATGCCCTGCCTCAGTATCCCCAGAACTTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | GTGGAGATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VEILDDVIGQGWSCRVLEKERRG*WDHHSS Trigger: GGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTT...TTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGATCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | CATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCACCTGTGATTTTGGGCGGAGAATaGCTCTGTACAGATCGGAGG | + |
Preference number: 4 (lower is better) Translates to: HEMPWRGWGRHTYMRAPVILGGE*LCTDRR Trigger: CCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAAT...CACAGGTGCACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR CCA 90 bp | CCCCAGCTGCTAGGTTACAAGCTCAAAGGTGTTTCCCCAGTCAGGTCCATCTCATGGCAATGCTGGAGGTaGTCTCATGACGCTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: PQLLGYKLKGVSPVRSISWQCWR*SHDAGQ Trigger: CTGGCCAGCGTCATGAGACCACCTCCAGCATTGCCA...TGAGATGGACCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGCAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | CATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTGATATTCGCCGGATCGGCTaGTGGTGGAGGACAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: HPEAISLSFPESHSLKSDIRRIG*WWRTAA Trigger: CGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAAT...ATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | ATCACATATCATGAAATGCCATGGCGGGGGTGGGGGCGACACACATATATGCGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGG | + |
Preference number: 4 (lower is better) Translates to: ITYHEMPWRGWGRHTYMRAGPGV*SSYPAR Trigger: CCGTGCAGGATATGAACTGCATACGCCAGGCCCAGC...ACGCATATATGTGTGTCGCCCCCACCCCCGCCATGGCATTTCATGATATGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR TCA 90 bp | CATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGTCACTCTCTGAAGAGTGATCCCCAGCAGCAAGACTaGGCCCAAGGAAGCCAAGGT | + |
Preference number: 4 (lower is better) Translates to: HPEAISLSFPESHSLKSDPQQQD*AQGSQG Trigger: ACCTTGGCTTCCTTGGGCTCAGTCTTGCTGCTGGGG...ATCACTCTTCAGAGAGTGACTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR CCA 90 bp | ACTCCAGATGAGTATCCTCTAGAGACCCCAGGACCAGGCATAGAGCATGACAGTTCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTA | + |
Preference number: 4 (lower is better) Translates to: TPDEYPLETPGPGIEHDSSPWPF*AENASV Trigger: TACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGA...ACTGTCATGCTCTATGCCTGGTCCTGGGGTCTCTAGAGGATACTCATCTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR TCA 90 bp | TCCCCAGTCAGGTCCATCTCATCCGGAAGCCATTTCTCTCAGTTTTCCCGAGAGAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACT | + |
Preference number: 4 (lower is better) Translates to: SPVRSISSGSHFSQFSRERRQLS*DAKDAT Trigger: AGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCT...CTCTCGGGAAAACTGAGAGAAATGGCTTCCGGATGAGATGGACCTGACTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS-3UTR GCA 90 bp | ATCCTTGATGATGTCATAGGGCAAGGCTGGAGTTGTAGGGTCTTGGAAATATGGATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGC | + |
Preference number: 4 (lower is better) Translates to: ILDDVIGQGWSCRVLEIWMQFIS*TAELIS Trigger: GCTGATGAGCTCTGCCGTGCAGGATATGAACTGCAT...CCATATTTCCAAGACCCTACAACTCCAGCCTTGCCCTATGACATCATCAAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS GCA 90 bp | GACAGAGCACAGTGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTaGTGGTGGAGGACAGCAGCGCCACACCACCGGCCCCACAGCCAG | + |
Preference number: 5 (lower is better) Translates to: DRAQCPRLVAIRRIG*WWRTAAPHHRPHSQ Trigger: CTGGCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGCTCTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 90 bp | GCACAGTGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACACCACCGGCCCCACAGCCAGCCACAA | + |
Preference number: 5 (lower is better) Translates to: AQCPRLVAIRRIGCW*RTAAPHHRPHSQPQ Trigger: TTGTGGCTGGCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 |
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CDS CCA 90 bp | GCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: ASAPPPLRSKATCWA*RMQFISCTAELISC Trigger: GCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 90 bp | ACTACAACAGCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTC | + |
Preference number: 5 (lower is better) Translates to: TTTASAPPPLRSKAT*WAWRMQFISCTAEL Trigger: GAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGCTGTTGTAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 90 bp | ACAACAGCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTaGGCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATC | + |
Preference number: 5 (lower is better) Translates to: TTASAPPPLRSKATC*AWRMQFISCTAELI Trigger: GATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGCTGTTGT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 90 bp | TCAGCTGCTTCACCAGAACCAGCAGGGCCAGCAGACAGAGCACAGTaGCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTGGAGG | + |
Preference number: 5 (lower is better) Translates to: SAASPEPAGPADRAQ*PRLVAIRRIGCWWR Trigger: CCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCACTGTGCTCTGTCTGCTGGCCCTGCTGGTTCTGGTGAAGCAGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 90 bp | CGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGGCAGAGCTCATCAGCTGCTTCACCA | + |
Preference number: 5 (lower is better) Translates to: RLRRCAARPRAGPGV*SSYPARQSSSAASP Trigger: TGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 90 bp | AGGATCACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTGCTaGGACCACCATAGCTCCACCTGCTCTGCCAGCACATCTGGGGGC | + |
Preference number: 5 (lower is better) Translates to: RITATEKQSKERRGC*DHHSSTCSASTSGG Trigger: GCCCCCAGATGTGCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGTGATCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 ENSMUST00000156191.2 |
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CDS GCA 90 bp | ACAAGGATCACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCCACCTGCTCTGCCAGCACATCTGGG | + |
Preference number: 5 (lower is better) Translates to: TRITATEKQSKERRG*WDHHSSTCSASTSG Trigger: CCCAGATGTGCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGTGATCCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 ENSMUST00000156191.2 |
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CDS GCA 90 bp | CGCAGCAAGGCCACGTGCTGGGCCTGGCGTATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGCTGCTTCACCAGAACCAGCAGGGCC | + |
Preference number: 5 (lower is better) Translates to: RSKATCWAWRMQFIS*TAELISCFTRTSRA Trigger: GGCCCTGCTGGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 90 bp | GCCTGGCGTATGCAGTTCATATCCTGCACGGCAGAGCTCATCAGCTaGTTCACCAGAACCAGCAGGGCCAGCAGACAGAGCACAGTGCCC | + |
Preference number: 5 (lower is better) Translates to: AWRMQFISCTAELIS*FTRTSRASRQSTVP Trigger: GGGCACTGTGCTCTGTCTGCTGGCCCTGCTGGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 90 bp | AATGCCTCTGTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTaGTACAGTAGCAACCCCAGCAGCAAGACTGAGCCCAAGGAAGCC | + |
Preference number: 5 (lower is better) Translates to: NASVQIGGQCPLTPT*YSSNPSSKTEPKEA Trigger: GGCTTCCTTGGGCTCAGTCTTGCTGCTGGGGTTGCTACTGTACCAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTACAGAGGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS GCA 90 bp | GCTAAAGATGCTACTGTTATCACCGTGGCCATTTTGGGCGGAGAATaGCTCTGTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTG | + |
Preference number: 5 (lower is better) Translates to: AKDATVITVAILGGE*LCTDRRAVSTHTHL Trigger: CAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CCA 90 bp | TGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAGTGTCCACTC | + |
Preference number: 5 (lower is better) Translates to: CPEMLKMLLLSPWPF*AENASVQIGGQCPL Trigger: GAGTGGACACTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS TCA 90 bp | AATGCTGGAGGTGGTCTCATGACGCTGGCCAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTGGGC | + |
Preference number: 5 (lower is better) Translates to: NAGGGLMTLARRQLS*DAKDATVITVAILG Trigger: GCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCTGGCCAGCGTCATGAGACCACCTCCAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CCA 90 bp | GAAGACAACTGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTaGCCATTTTGGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAG | + |
Preference number: 5 (lower is better) Translates to: EDNCPEMLKMLLLSP*PFWAENASVQIGGQ Trigger: CTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CCA 72 bp | CCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTGGTaGAGGACAGCAGCGCCACACCACCGGCCCCACAGC | + |
Preference number: 6 (lower is better) Translates to: PRLVAIRRIGCW*RTAAPHHRPHS Trigger: GCTGTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 |
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CDS CCA 72 bp | TGCCCACGGCTAGTCGCCATTCGCCGGATCGGCTGCTaGTGGAGGACAGCAGCGCCACACCACCGGCCCCAC | + |
Preference number: 6 (lower is better) Translates to: CPRLVAIRRIGC*WRTAAPHHRPH Trigger: GTGGGGCCGGTGGTGTGGCGCTGCTGTCCTCCACCAGCAGCCGATCCGGCGAATGGCGACTAGCCGTGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 |
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CDS GCA 72 bp | GCGTCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTaGTGGGCCTGGCGTATGCAGTTCATATCCTGCACG | + |
Preference number: 6 (lower is better) Translates to: ASAPPPLRSKAT*WAWRMQFISCT Trigger: CGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 72 bp | TCGGCGCCTCCGCCGCTGCGCAGCAAGGCCACGTGCTaGGCCTGGCGTATGCAGTTCATATCCTGCACGGCA | + |
Preference number: 6 (lower is better) Translates to: SAPPPLRSKATC*AWRMQFISCTA Trigger: TGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGGCGCCGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 72 bp | CCTCCGCCGCTGCGCAGCAAGGCCACGTGCTGGGCCTaGCGTATGCAGTTCATATCCTGCACGGCAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: PPPLRSKATCWA*RMQFISCTAEL Trigger: GAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCGGCGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 72 bp | ACGGCCACGGAGAAACAGAGCAAGGAGCGACGGGGCTaGTGGGACCACCATAGCTCCACCTGCTCTGCCAGC | + |
Preference number: 6 (lower is better) Translates to: TATEKQSKERRG*WDHHSSTCSAS Trigger: GCTGGCAGAGCAGGTGGAGCTATGGTGGTCCCAGCAGCCCCGTCGCTCCTTGCTCTGTTTCTCCGTGGCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 ENSMUST00000150044.2 ENSMUST00000156191.2 |
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CDS GCA 72 bp | CGCTGCGCAGCAAGGCCACGTGCTGGGCCTGGCGTATaGAGTTCATATCCTGCACGGCAGAGCTCATCAGCT | + |
Preference number: 6 (lower is better) Translates to: RCAARPRAGPGV*SSYPARQSSSA Trigger: AGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGCCTTGCTGCGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS GCA 72 bp | GCCACGTGCTGGGCCTGGCGTATGCAGTTCATATCCTaGACGGCAGAGCTCATCAGCTGCTTCACCAGAACC | + |
Preference number: 6 (lower is better) Translates to: ATCWAWRMQFIS*TAELISCFTRT Trigger: GGTTCTGGTGAAGCAGCTGATGAGCTCTGCCGTGCAGGATATGAACTGCATACGCCAGGCCCAGCACGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060214.10 ENSMUST00000128098.8 |
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CDS CCA 72 bp | GTACAGATCGGAGGGCAGTGTCCACTCACACCCACCTaGTACAGTAGCAACCCCAGCAGCAAGACTGAGCCC | + |
Preference number: 6 (lower is better) Translates to: VQIGGQCPLTPT*YSSNPSSKTEP Trigger: GGGCTCAGTCTTGCTGCTGGGGTTGCTACTGTACCAGGTGGGTGTGAGTGGACACTGCCCTCCGATCTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS TCA 72 bp | GGTGGTCTCATGACGCTGGCCAGAAGACAACTGTCCTaGGATGCTAAAGATGCTACTGTTATCACCGTGGCC | + |
Preference number: 6 (lower is better) Translates to: GGLMTLARRQLS*DAKDATVITVA Trigger: GGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACAGTTGTCTTCTGGCCAGCGTCATGAGACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CCA 72 bp | ATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTTaGGCGGAGAATGCCTCTGTACAGATCGGAGGGCAG | + |
Preference number: 6 (lower is better) Translates to: MLKMLLLSPWPF*AENASVQIGGQ Trigger: CTGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CAA 72 bp | GATGCTAAAGATGCTACTGTTATCACCGTGGCCATTTaGGGCGGAGAATGCCTCTGTACAGATCGGAGGGCA | + |
Preference number: 6 (lower is better) Translates to: DAKDATVITVAI*GGECLCTDRRA Trigger: TGCCCTCCGATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |
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CDS CCA 72 bp | TGTCCTGAGATGCTAAAGATGCTACTGTTATCACCGTaGCCATTTTGGGCGGAGAATGCCTCTGTACAGATC | + |
Preference number: 6 (lower is better) Translates to: CPEMLKMLLLSP*PFWAENASVQI Trigger: GATCTGTACAGAGGCATTCTCCGCCCAAAATGGCCACGGTGATAACAGTAGCATCTTTAGCATCTCAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060214.10 |