Pregenerated sensors for TMEM121B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094626Ensembl transcript IDs: ENSMUST00000178687.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACACAGCGAAGCTGGGGGACACAGTCAGAGCACTGGGAGCAGCTaGAGCCCCCGCCCGGGCCTTAGGCCCAGGACCATGAGTCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: KHSEAGGHSQSTGSS*SPRPGLRPRTMSPV Trigger: GACTGGACTCATGGTCCTGGGCCTAAGGCCCGGGCGGGGGCTGCAGCTGCTCCCAGTGCTCTGACTGTGTCCCCCAGCTTCGCTGTGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 90 bp | CTGGGAGCAGCTGCAGCCCCCGCCCGGGCCTTAGGCCCAGGACCATaGGTCCAGTCAGAAGGACAGTCAGCCAGGTTGAGGAGAAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LGAAAAPARALGPGP*VQSEGQSARLRRKG Trigger: GCCTTTTCTCCTCAACCTGGCTGACTGTCCTTCTGACTGGACTCATGGTCCTGGGCCTAAGGCCCGGGCGGGGGCTGCAGCTGCTCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | CCCTTGAAGGACAATCCTAAGGACAGCCTCTCCAGGGAACCCTGCTaGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCCTTCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLKDNPKDSLSREPC*GRLGRRALQCAFSL Trigger: CAGGGAGAAGGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATTGTCCTTCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR GCA 90 bp | CTTCCCTTGAAGGACAATCCTAAGGACAGCCTCTCCAGGGAACCCTaGTGGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LPLKDNPKDSLSREP*WGRLGRRALQCAFS Trigger: GGAGAAGGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATTGTCCTTCAAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | AGCACAGAGGTAGAGTGCGTGCTCACCCAAGAAAGGGTGGGTGTTTaGTCCTTCCATAGAGACCTGCTCCTCCCCAGGCTGAGCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: STEVECVLTQERVGV*SFHRDLLLPRLSRE Trigger: CTCTCTGCTCAGCCTGGGGAGGAGCAGGTCTCTATGGAAGGACCAAACACCCACCCTTTCTTGGGTGAGCACGCACTCTACCTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | TATAGAGCGCAGACTGTAAACACCCTCCACACGGCCCACATTAGCTaGGCAGGCCCACGAGTGTTCCAGCTCAGCCGTCCACACTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: YRAQTVNTLHTAHIS*AGPRVFQLSRPHFC Trigger: ACAGAAGTGTGGACGGCTGAGCTGGAACACTCGTGGGCCTGCCCAGCTAATGTGGGCCGTGTGGAGGGTGTTTACAGTCTGCGCTCTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 90 bp | ATGACATCCCTCATGAAGCCTGCAGGAGCCAACCCTGACTTCCCTTaGAGGACAATCCTAAGGACAGCCTCTCCAGGGAACCCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: MTSLMKPAGANPDFP*RTILRTASPGNPAG Trigger: CCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATTGTCCTTCAAGGGAAGTCAGGGTTGGCTCCTGCAGGCTTCATGAGGGATGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR GCA 90 bp | GAAGAAGACCGCGGTGAACATGGGCCCTTCTTCCTCACGGTATATTaGTGGTCTCCCTCCAAGCAGTCTCTACCCACGGGGTGCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: EEDRGEHGPFFLTVY*WSPSKQSLPTGCRR Trigger: TCTTCTGCACCCCGTGGGTAGAGACTGCTTGGAGGGAGACCAGCAATATACCGTGAGGAAGAAGGGCCCATGTTCACCGCGGTCTTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | GAAGACCGCGGTGAACATGGGCCCTTCTTCCTCACGGTATATTGCTaGTCTCCCTCCAAGCAGTCTCTACCCACGGGGTGCAGAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: EDRGEHGPFFLTVYC*SPSKQSLPTGCRRI Trigger: GATTCTTCTGCACCCCGTGGGTAGAGACTGCTTGGAGGGAGACCAGCAATATACCGTGAGGAAGAAGGGCCCATGTTCACCGCGGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | GGGAGAGCAAGCCAATGGCTGGTACTCCACAGACCCTGTAATATCTaGCACCGAATCCCAAGGGGATCCAGTGGCCCTGTTGAATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: GRASQWLVLHRPCNI*HRIPRGSSGPVECN Trigger: GTTGCATTCAACAGGGCCACTGGATCCCCTTGGGATTCGGTGCCAGATATTACAGGGTCTGTGGAGTACCAGCCATTGGCTTGCTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | CCACAGCAGAGGGACAGCTATCCAAACAGTAGAAAGAGGGTGGGTTaGGGGCCAGCCAGAGCCGGCCATGGCTCAGAGATCATTTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: PQQRDSYPNSRKRVG*GPARAGHGSEIISF Trigger: AAAAGAAATGATCTCTGAGCCATGGCCGGCTCTGGCTGGCCCCCAACCCACCCTCTTTCTACTGTTTGGATAGCTGTCCCTCTGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | CATTTCCACAGCAGAGGGACAGCTATCCAAACAGTAGAAAGAGGGTaGGTTGGGGGCCAGCCAGAGCCGGCCATGGCTCAGAGATCATTT | + |
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Preference number: 1 (lower is better) Translates to: HFHSRGTAIQTVERG*VGGQPEPAMAQRSF Trigger: AAATGATCTCTGAGCCATGGCCGGCTCTGGCTGGCCCCCAACCCACCCTCTTTCTACTGTTTGGATAGCTGTCCCTCTGCTGTGGAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | TCAGACACTCACAGAAGACTTGTAGATGATGTACAGGACCTGTGCTaGGCCCTCACTAGGCCCTCAGCAACCCTGGCCTCACTCACACGT | + |
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Preference number: 1 (lower is better) Translates to: SDTHRRLVDDVQDLC*ALTRPSATLASLTR Trigger: ACGTGTGAGTGAGGCCAGGGTTGCTGAGGGCCTAGTGAGGGCCCAGCACAGGTCCTGTACATCATCTACAAGTCTTCTGTGAGTGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 90 bp | TACAGAAGCAGAGCCCTCCTCAAGTCCACCTGGACAGTTCCTCTCTaGCTACCTTTACGGCAGCGTTATGACCAGACTCTTCAAGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: YRSRALLKSTWTVPL*LPLRQRYDQTLQAP Trigger: TGGGGCTTGAAGAGTCTGGTCATAACGCTGCCGTAAAGGTAGTCAGAGAGGAACTGTCCAGGTGGACTTGAGGAGGGCTCTGCTTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 90 bp | TATTCTGGTGCAGAGGGAGGAACAAAGGGAGAGCAAGCCAATGGCTaGTACTCCACAGACCCTGTAATATCTGGCACCGAATCCCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: YSGAEGGTKGEQANG*YSTDPVISGTESQG Trigger: CCCTTGGGATTCGGTGCCAGATATTACAGGGTCTGTGGAGTACCAGCCATTGGCTTGCTCTCCCTTTGTTCCTCCCTCTGCACCAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 90 bp | GTCCACCTGGACAGTTCCTCTCTGACTACCTTTACGGCAGCGTTATaGCCAGACTCTTCAAGCCCCAACTCAAAGAACACTACCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VHLDSSSLTTFTAAL*PDSSSPNSKNTTPE Trigger: CTCTGGGGTAGTGTTCTTTGAGTTGGGGCTTGAAGAGTCTGGTCATAACGCTGCCGTAAAGGTAGTCAGAGAGGAACTGTCCAGGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 90 bp | AAATGTTTAAAAGATGGGATGCAAGTCTTTAGAGAGAGCACAGACTaGATAAGACTTGGTGTTGGGGATGTTGAGCGGCAGGCTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: KCLKDGMQVFRESTD*IRLGVGDVERQADK Trigger: CTTGTCAGCCTGCCGCTCAACATCCCCAACACCAAGTCTTATTCAGTCTGTGCTCTCTCTAAAGACTTGCATCCCATCTTTTAAACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTAAGGACAGCCTCTCCAGGGAACCCTGCTGGGGAAGGCTAGGCAGGAGGGAAGCAGAGGAGAGGTaGAAGGTCACACACCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NPKDSLSREPCWGRLGRREAEER*KVTHPL Trigger: GAGAGGGTGTGTGACCTTTCACCTCTCCTCTGCTTC...CCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGGAGGGAGGAAGACCCTGGGCGAGCTTCTCCCTTGGAGTACAGCAACCCTCACGGTATATTGCTaGTCTCCCTCCAAGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GAGGRKTLGELLPWSTATLTVYC*SPSKQS Trigger: AGACTGCTTGGAGGGAGACCAGCAATATACCGTGAG...GGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTCCCTCCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTCACTCACACGTGGCCATGTGACCATGTCTCTTGATGTACCAAGGAAAAGAAAGAGGGTGGGTTaGGGGCCAGCCAGAGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: LASLTRGHVTMSLDVPRKRKRVG*GPARAG Trigger: GCCGGCTCTGGCTGGCCCCCAACCCACCCTCTTTCT...TTTCCTTGGTACATCAAGAGACATGGTCACATGGCCACGTGTGAGTGAGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CAA 90 bp | CCAGCCTGGCTCCTTGTTGGGGTGAGTATACCCCAGCCTGGCTCCTaGTGCCTTCTGAACCTTGATTGCCCTCAGAATACATATCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PAWLLVGVSIPQPGS*CLLNLDCPQNTYPA Trigger: GGCAGGATATGTATTCTGAGGGCAATCAAGGTTCAGAAGGCACAAGGAGCCAGGCTGGGGTATACTCACCCCAACAAGGAGCCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGCTGCTAAGTTACTAGTCAGTGACTTGGCACTCTGGGCCTTCCCCTGTGCTCCTTGTGCCTTCTaGACCTTGATTGCCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GLAAKLLVSDLALWAFPCAPCAF*TLIALR Trigger: TCTGAGGGCAATCAAGGTTCAGAAGGCACAAGGAGC...ACAGGGGAAGGCCCAGAGTGCCAAGTCACTGACTAGTAACTTAGCAGCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGCTGCTAAGTTACTAGTCAGTGACTTGGCACTCTGGGCCTTCCCCTGTGAGCAAGCCAATGGCTaGTACTCCACAGACCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GLAAKLLVSDLALWAFPCEQANG*YSTDPV Trigger: TACAGGGTCTGTGGAGTACCAGCCATTGGCTTGCTC...ACAGGGGAAGGCCCAGAGTGCCAAGTCACTGACTAGTAACTTAGCAGCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGCTGCTAAGTTACTAGTCAGTGACTTGGCACTCTGGGCCTTCCCCTGTCAAGGGGCATGGGACTaGCACCCAGAAAATACACTA | + |
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Preference number: 2 (lower is better) Translates to: GLAAKLLVSDLALWAFPCQGAWD*HPENTL Trigger: TAGTGTATTTTCTGGGTGTCAGTCCCATGCCCCTTG...ACAGGGGAAGGCCCAGAGTGCCAAGTCACTGACTAGTAACTTAGCAGCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCTCACTCACACGTGGCCATGTGACCATGTCTCTTGATGTACCAAGGAAAAGCCTGGCTCCTTGTTaGGGTGAGTATACCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LASLTRGHVTMSLDVPRKSLAPC*GEYTPA Trigger: GGCTGGGGTATACTCACCCCAACAAGGAGCCAGGCT...TTTCCTTGGTACATCAAGAGACATGGTCACATGGCCACGTGTGAGTGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTAAGGCAGGCTTACTGTaGAAAGCAGCTAGTCGGCCG | + |
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Preference number: 2 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVKAGLL*KAASRP Trigger: CGGCCGACTAGCTGCTTTTCACAGTAAGCCTGCCTT...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCTGCTCTGTGCCAAGTTTTCTAAAGGCACCGGTGCTACTGCCCGGGTCCAATCCACTGGCCTTCTaGCTTATCAACACTTACCTC | + |
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Preference number: 2 (lower is better) Translates to: PLCSVPSFLKAPVLLPGSNPLAF*LINTYL Trigger: GAGGTAAGTGTTGATAAGGCAGAAGGCCAGTGGATT...GGACCCGGGCAGTAGCACCGGTGCCTTTAGAAAACTTGGCACAGAGCAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGGCTGCTAAGTTACTAGTCAGTGACTTGGCACTCTGGGCCTTCCCCTGTGTCACACACCCTCTCTaGTCTGTGCCAAGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GLAAKLLVSDLALWAFPCVTHPL*SVPSFL Trigger: TAGAAAACTTGGCACAGAGCAGAGAGGGTGTGTGAC...ACAGGGGAAGGCCCAGAGTGCCAAGTCACTGACTAGTAACTTAGCAGCCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTGAAACACAGCGAAGCTaGGGGACACAGTCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVETQRS*GTQSEH Trigger: GTGCTCTGACTGTGTCCCCCAGCTTCGCTGTGTTTC...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAGAGGGTCTCCTAAACCCCCAAATTCTAAGCCAGCCCTGGGAACACAGTTGGACAGTTCCTCTCTaGCTACCTTTACGGCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: AKEGLLNPQILSQPWEHSWTVPL*LPLRQR Trigger: ACGCTGCCGTAAAGGTAGTCAGAGAGGAACTGTCCA...ACTGTGTTCCCAGGGCTGGCTTAGAATTTGGGGGTTTAGGAGACCCTCTTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTTCCTTGAGATTAGGCCCAGGACCATaGGTCCAGTCAGAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: VNRHSLGWMTQGTPVSLRLGPGP*VQSEGQ Trigger: CTGTCCTTCTGACTGGACTCATGGTCCTGGGCCTAA...TCTCAAGGAAACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTTCCTTGAGAAGATCTCCTTCCCACTaGAAGGGGCATGGGACTGAC | + |
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Preference number: 2 (lower is better) Translates to: VNRHSLGWMTQGTPVSLRRSPSH*KGHGTD Trigger: GTCAGTCCCATGCCCCTTGCAGTGGGAAGGAGATCT...TCTCAAGGAAACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTTCCTTGAGAAGTGTGCCTTCTCCCTaGAGAGATCTGAAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VNRHSLGWMTQGTPVSLRSVPSP*RDLKQR Trigger: CCTCTGCTTCAGATCTCTTCAGGGAGAAGGCACACT...TCTCAAGGAAACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | GTAATTAACTTGTTTTTAAAACTCAGGTACCAGGCCCTCAGCCTCTATGCTCAGACACAGTCAGAGCACTaGGAGCAGCTGCAGCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: VINLFLKLRYQALSLYAQTQSEH*EQLQPP Trigger: CGGGGGCTGCAGCTGCTCCCAGTGCTCTGACTGTGT...CTGAGCATAGAGGCTGAGGGCCTGGTACCTGAGTTTTAAAAACAAGTTAATTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAGAGGGTCTCCTAAACCCCCAAATTCTAAGCCAGCCCTGGGAACACAGTATCCAGTGGCCCTGTTaGATGCAACTTCTGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: AKEGLLNPQILSQPWEHSIQWPC*MQLLSV Trigger: AACACTCAGAAGTTGCATTCAACAGGGCCACTGGAT...ACTGTGTTCCCAGGGCTGGCTTAGAATTTGGGGGTTTAGGAGACCCTCTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATAAATAGCCCAGAGGAAGGAACCAGCCCTGAGTCAGACACTCACAGAAGATCTCTACCCACGGGGTaGAGAAGAATCCACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KINSPEEGTSPESDTHRRSLPTG*RRIHWP Trigger: AGGCCAGTGGATTCTTCTGCACCCCGTGGGTAGAGA...TCTTCTGTGAGTGTCTGACTCAGGGCTGGTTCCTTCCTCTGGGCTATTTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAATAGCCCAGAGGAAGGAACCAGCCCTGAGTCAGACACTCACAGAAGAGACAGTCAGCCAGGTTaGGGAGAAAAGGCAGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: KINSPEEGTSPESDTHRRDSQPG*GEKAGL Trigger: TAAGCCTGCCTTTTCTCCTCAACCTGGCTGACTGTC...TCTTCTGTGAGTGTCTGACTCAGGGCTGGTTCCTTCCTCTGGGCTATTTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTTGCAGAAGAATCCACTaGCCTTCTGCCTTATCAACA | + |
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Preference number: 2 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVCRRIH*PSALST Trigger: TGTTGATAAGGCAGAAGGCCAGTGGATTCTTCTGCA...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | GTAATTAACTTGTTTTTAAAACTCAGGTACCAGGCCCTCAGCCTCTATGCTCAGGCCCCATACAGCCCTTaGTTCTCAGAAGGTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: VINLFLKLRYQALSLYAQAPYSP*FSEGPN Trigger: GTTAGGACCTTCTGAGAACCAAGGGCTGTATGGGGC...CTGAGCATAGAGGCTGAGGGCCTGGTACCTGAGTTTTAAAAACAAGTTAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTGACCATGTCTCTTGATGTACCAAGGAAATGTCAGCCTTCCTGTCCTAAAAACCCTGACTTCCCTTaGAGGACAATCCTAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: HVTMSLDVPRKCQPSCPKNPDFP*RTILRT Trigger: TGTCCTTAGGATTGTCCTTCAAGGGAAGTCAGGGTT...TTTAGGACAGGAAGGCTGACATTTCCTTGGTACATCAAGAGACATGGTCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGACCATGTCTCTTGATGTACCAAGGAAATGTCAGCCTTCCTGTCCTAAACAGTGTGTGATGCACTaGAAATCGAAGCACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HVTMSLDVPRKCQPSCPKQCVMH*KSKHRG Trigger: ACCTCTGTGCTTCGATTTCCAGTGCATCACACACTG...TTTAGGACAGGAAGGCTGACATTTCCTTGGTACATCAAGAGACATGGTCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR GCA 72 bp | GAAGCTGGGGGACACAGTCAGAGCACTGGGAGCAGCTaGAGCCCCCGCCCGGGCCTTAGGCCCAGGACCATG | + |
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Preference number: 3 (lower is better) Translates to: EAGGHSQSTGSS*SPRPGLRPRTM Trigger: CATGGTCCTGGGCCTAAGGCCCGGGCGGGGGCTGCAGCTGCTCCCAGTGCTCTGACTGTGTCCCCCAGCTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR TCA 72 bp | GCTGCAGCCCCCGCCCGGGCCTTAGGCCCAGGACCATaGGTCCAGTCAGAAGGACAGTCAGCCAGGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AAAPARALGPGP*VQSEGQSARLR Trigger: CCTCAACCTGGCTGACTGTCCTTCTGACTGGACTCATGGTCCTGGGCCTAAGGCCCGGGCGGGGGCTGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 72 bp | GACAATCCTAAGGACAGCCTCTCCAGGGAACCCTGCTaGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: DNPKDSLSREPC*GRLGRRALQCA Trigger: GGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR GCA 72 bp | GGGAATGTGATGAATGCTAGCGAGGTGCCACTTCTCTaGCTCTTCCGGGCTTGCTGTCCCAGCTCTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GNVMNASEVPLL*LFRACCPSSGP Trigger: GGGCCCAGAGCTGGGACAGCAAGCCCGGAAGAGGCAGAGAAGTGGCACCTCGCTAGCATTCATCACATTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR CCA 72 bp | CAGACTGTAAACACCCTCCACACGGCCCACATTAGCTaGGCAGGCCCACGAGTGTTCCAGCTCAGCCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: QTVNTLHTAHIS*AGPRVFQLSRP Trigger: TGGACGGCTGAGCTGGAACACTCGTGGGCCTGCCCAGCTAATGTGGGCCGTGTGGAGGGTGTTTACAGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| 3UTR GCA 72 bp | CGCGGTGAACATGGGCCCTTCTTCCTCACGGTATATTaGTGGTCTCCCTCCAAGCAGTCTCTACCCACGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RGEHGPFFLTVY*WSPSKQSLPTG Trigger: CCCCGTGGGTAGAGACTGCTTGGAGGGAGACCAGCAATATACCGTGAGGAAGAAGGGCCCATGTTCACCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGAACCCTGCTGGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCCTTCTCGATCCAGTGGCCCTGTaGAATGCAACTTCTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QGTLLGKARQEGSAVCLLDPVAL*NATSEC Trigger: ACACTCAGAAGTTGCATTCAACAGGGCCACTGGATC...GAGAAGGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GGTGAACATGGGCCCTTCTTCCTCACGGTATATTGCTaGTCTCCCTCCAAGCAGTCTCTACCCACGGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GEHGPFFLTVYC*SPSKQSLPTGC Trigger: GCACCCCGTGGGTAGAGACTGCTTGGAGGGAGACCAGCAATATACCGTGAGGAAGAAGGGCCCATGTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GTAGAGTGCGTGCTCACCCAAGAAAGGGTGGGTGTTTaGTCCTTCCATAGAGACCTGCTCCTCCCCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VECVLTQERVGV*SFHRDLLLPRL Trigger: CAGCCTGGGGAGGAGCAGGTCTCTATGGAAGGACCAAACACCCACCCTTTCTTGGGTGAGCACGCACTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | CACAGAAGACTTGTAGATGATGTACAGGACCTGTGCTaGGCCCTCACTAGGCCCTCAGCAACCCTGGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRRLVDDVQDLC*ALTRPSATLAS Trigger: TGAGGCCAGGGTTGCTGAGGGCCTAGTGAGGGCCCAGCACAGGTCCTGTACATCATCTACAAGTCTTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | GAGGGCTCTGCAGTGTGCCTTCTCCCTGAAGAGATCTaGAGCAGAGGAGAGGTGAAAGGTCACACACCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGSAVCLLPEEI*SRGEVKGHTPS Trigger: AGAGGGTGTGTGACCTTTCACCTCTCCTCTGCTTCAGATCTCTTCAGGGAGAAGGCACACTGCAGAGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | CTCATGAAGCCTGCAGGAGCCAACCCTGACTTCCCTTaGAGGACAATCCTAAGGACAGCCTCTCCAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LMKPAGANPDFP*RTILRTASPGN Trigger: GTTCCCTGGAGAGGCTGTCCTTAGGATTGTCCTTCAAGGGAAGTCAGGGTTGGCTCCTGCAGGCTTCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | AGCCAATGGCTGGTACTCCACAGACCCTGTAATATCTaGCACCGAATCCCAAGGGGATCCAGTGGCCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQWLVLHRPCNI*HRIPRGSSGPV Trigger: AACAGGGCCACTGGATCCCCTTGGGATTCGGTGCCAGATATTACAGGGTCTGTGGAGTACCAGCCATTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | GATGACATCCCTCATGAAGCCTGCAGGAGCCAACCCTaGCTTCCCTTGAAGGACAATCCTAAGGACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DDIPHEACRSQP*LPLKDNPKDSL Trigger: GAGGCTGTCCTTAGGATTGTCCTTCAAGGGAAGTCAGGGTTGGCTCCTGCAGGCTTCATGAGGGATGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | CCTCAGCAACCCTGGCCTCACTCACACGTGGCCATGTaGCCATGTCTCTTGATGTACCAAGGAAATGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQQPWPHSHVAM*PCLLMYQGNVS Trigger: GCTGACATTTCCTTGGTACATCAAGAGACATGGTCACATGGCCACGTGTGAGTGAGGCCAGGGTTGCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GCAGAGGGAGGAACAAAGGGAGAGCAAGCCAATGGCTaGTACTCCACAGACCCTGTAATATCTGGCACCGAA | + |
|
Preference number: 3 (lower is better) Translates to: AEGGTKGEQANG*YSTDPVISGTE Trigger: TTCGGTGCCAGATATTACAGGGTCTGTGGAGTACCAGCCATTGGCTTGCTCTCCCTTTGTTCCTCCCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | TGGTGCAGAGGGAGGAACAAAGGGAGAGCAAGCCAATaGCTGGTACTCCACAGACCCTGTAATATCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WCRGRNKGRASQ*LVLHRPCNIWH Trigger: GTGCCAGATATTACAGGGTCTGTGGAGTACCAGCCATTGGCTTGCTCTCCCTTTGTTCCTCCCTCTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GCTTCCCAGAGCATGGTTAACAGGCACAGTCTTGGTTaGATGACACAGGGCACTCCTGTTTCCTTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASQSMVNRHSLG*MTQGTPVSLRG Trigger: GCCTCTCAAGGAAACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | ATCCCTTGTATGTCAGGACAGGGAAGAAGACCGCGGTaGACATGGGCCCTTCTTCCTCACGGTATATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPCMSGQGRRPR*TWALLPHGILL Trigger: CAGCAATATACCGTGAGGAAGAAGGGCCCATGTTCACCGCGGTCTTCTTCCCTGTCCTGACATACAAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | AGAGCCCTCCTCAAGTCCACCTGGACAGTTCCTCTCTaGCTACCTTTACGGCAGCGTTATGACCAGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RALLKSTWTVPL*LPLRQRYDQTL Trigger: AAGAGTCTGGTCATAACGCTGCCGTAAAGGTAGTCAGAGAGGAACTGTCCAGGTGGACTTGAGGAGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR GCA 72 bp | GTTGTGAAGCAAGGCCTCTCTAGATCTCCTTCCCACTaGAAGGGGCATGGGACTGACACCCAGAAAATACAC | + |
|
Preference number: 3 (lower is better) Translates to: VVKQGLSRSPSH*KGHGTDTQKIH Trigger: GTGTATTTTCTGGGTGTCAGTCCCATGCCCCTTGCAGTGGGAAGGAGATCTAGAGAGGCCTTGCTTCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATTCCAACCCGGCTGGCACCAACACAGGAAGGATAATTATTCTGGTGCAGAGCTTCCTCACGGTATATaGCTGGTCTCCCTCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QFQPGWHQHRKDNYSGAELPHGI*LVSLQA Trigger: TGCTTGGAGGGAGACCAGCAATATACCGTGAGGAAG...CTCTGCACCAGAATAATTATCCTTCCTGTGTTGGTGCCAGCCGGGTTGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | AAGCAGTCTCTACCCACGGGGTGCAGAAGAATCCACTaGCCTTCTGCCTTATCAACACTTACCTCCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: KQSLPTGCRRIH*PSALSTLTSKH Trigger: GTGTTTGGAGGTAAGTGTTGATAAGGCAGAAGGCCAGTGGATTCTTCTGCACCCCGTGGGTAGAGACTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | GACAGTTCCTCTCTGACTACCTTTACGGCAGCGTTATaGCCAGACTCTTCAAGCCCCAACTCAAAGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: DSSSLTTFTAAL*PDSSSPNSKNT Trigger: AGTGTTCTTTGAGTTGGGGCTTGAAGAGTCTGGTCATAACGCTGCCGTAAAGGTAGTCAGAGAGGAACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GAGGGTCTCCTAAACCCCCAAATTCTAAGCCAGCCCTaGGAACACAGTGAGACACCCACTAAAAGAAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: EGLLNPQILSQP*EHSETPTKRNV Trigger: AACATTTCTTTTAGTGGGTGTCTCACTGTGTTCCCAGGGCTGGCTTAGAATTTGGGGGTTTAGGAGACCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | AAAGATGGGATGCAAGTCTTTAGAGAGAGCACAGACTaGATAAGACTTGGTGTTGGGGATGTTGAGCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KDGMQVFRESTD*IRLGVGDVERQ Trigger: CTGCCGCTCAACATCCCCAACACCAAGTCTTATTCAGTCTGTGCTCTCTCTAAAGACTTGCATCCCATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CCA 72 bp | GACTCAGGACAGTGTACTATTCTGGTCATGACACTTTaGGGACATCTCAAGTCTGATCCCTGTCTACAGATA | + |
|
Preference number: 3 (lower is better) Translates to: DSGQCTILVMTL*GHLKSDPCLQI Trigger: TATCTGTAGACAGGGATCAGACTTGAGATGTCCCCAAAGTGTCATGACCAGAATAGTACACTGTCCTGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR TCA 72 bp | TATTCTGGTCATGACACTTTGGGGACATCTCAAGTCTaGTCCCTGTCTACAGATACCCTAGAAAGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YSGHDTLGTSQV*SLSTDTLESKR Trigger: TCTCTTGCTTTCTAGGGTATCTGTAGACAGGGATCAGACTTGAGATGTCCCCAAAGTGTCATGACCAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAACCCTGCTGGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCCTTCTCGGCGAAAGCCCGTGGTaGCAAAGGGCGCGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGTLLGKARQEGSAVCLLGESPW*QRARAA Trigger: AGCTGCGCGCGCCCTTTGGCACCACGGGCTTTCGCC...GAGAAGGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGAGGGAGGAAGACCCTGGGCGAGCTTCTCCCTTGGAGTACAGCAACCCGATGCTGCTGTGGCTaGAGGAGCAGGGGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGGRKTLGELLPWSTATRCCCG*RSRGPA Trigger: GGCGGGTCCCCTGCTCCTGCAGCCACAGCAGCATCG...GGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTCCCTCCTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTAAGGACAGCCTCTCCAGGGAACCCTGCTGGGGAAGGCTAGGCAGGAGGAGGTGGGCGTGGAAGTaGAGGAGGCGGCGGCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NPKDSLSREPCWGRLGRRRWAWK*RRRRRA Trigger: CGCCCGCCGCCGCCTCCTCCACTTCCACGCCCACCT...CCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTGGAGAGGCTGTCCTTAGGATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGACCCTGGGCGAGCTTCTCCCTTGGAGTACAGCAACCGAGCAACAACTCCGCGGCGGTCATGCTaGAGGAAGAGGTGGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEDPGRASPLEYSNRATTPRRSC*RKRWAW Trigger: CCACGCCCACCTCTTCCTGCAGCATGACCGCCGCGG...AGTTGTTGCTCGGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGACCCTGGGCGAGCTTCTCCCTTGGAGTACAGCAACCGAGCAACAACTGGCGGAGCCGAGTGGTaGTGGAGCTGGTGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEDPGRASPLEYSNRATTGGAEW*WSWWWL Trigger: CAACCACCACCAGCTCCACCACCACTCGGCTCCGCC...AGTTGTTGCTCGGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CAA 72 bp | GGCAGGAGGGAGGAAGACCCTGGGCGAGCTTCTCCCTaGGAGTACAGCAACCGAGCAACAACTCCATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRREEDPGRASP*EYSNRATTPSR Trigger: CCTCGATGGAGTTGTTGCTCGGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTCCCTCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTCACTCACACGTGGCCATGTGACCATGTCTCTTGATGTACCAAGGAAACGCGGCTGGTGCTGGTaGTGGTGCTGCTGTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LASLTRGHVTMSLDVPRKRGWCW*WCCCRP Trigger: CGGGCGACAGCAGCACCAGCACCAGCACCAGCCGCG...TTTCCTTGGTACATCAAGAGACATGGTCACATGGCCACGTGTGAGTGAGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAACCCTGCTGGGGAAGGCTAGGCAGGAGGGCTCTGCAGTGTGCCTTCTCGTACAGGTCAGTGACTaGAATGAGGTACAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGTLLGKARQEGSAVCLLVQVSD*NEVQVQ Trigger: CTGGACCTGTACCTCATTGCAGTCACTGACCTGTAC...GAGAAGGCACACTGCAGAGCCCTCCTGCCTAGCCTTCCCCAGCAGGGTTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | AAATCGAAGCACAGAGGTAGAGTGCGTGCTCACCCAAGAAAGGGTGGGTGTTTGGGCTGGTGCTGGTGCTaGTGCTGCTGTCGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKHRGRVRAHPRKGGCLGWCWC*CCCRPS Trigger: GCTCGGGCGACAGCAGCACCAGCACCAGCACCAGCC...CAAACACCCACCCTTTCTTGGGTGAGCACGCACTCTACCTCTGTGCTTCGATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTGGCGCGATGCTGCTGTaGCTGCAGGAGCAGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVGAMLL*LQEQGT Trigger: GGTCCCCTGCTCCTGCAGCCACAGCAGCATCGCGCC...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTAGTCCGCGGCGGTCATaGTGCAGGAAGAGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVSPRRS*CRKRWA Trigger: CGCCCACCTCTTCCTGCAGCATGACCGCCGCGGACT...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCATTTCCACAGCAGAGGGACAGCTATCCAAACAGTAGAAAGAGGGTGGGTGGAAGTAGACGGCGATaGGCAGGTAGCGCAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAFPQQRDSYPNSRKRVGGSRRR*AGSAGA Trigger: CGCACCTGCGCTACCTGCTCATCGCCGTCTACTTCC...ACCCACCCTCTTTCTACTGTTTGGATAGCTGTCCCTCTGCTGTGGAAATGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTAAATCCAGTGGCAGTCTCTCAGCAGCAGACAGCATTTCCACAGCAGAGGAGGAGCACCATAGCTaGTTCTGGCCCGACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPKSSGSLSAADSISTAEEEHHS*FWPDLG Trigger: CCCCAAGTCGGGCCAGAAGCAGCTATGGTGCTCCTC...CTCTGCTGTGGAAATGCTGTCTGCTGCTGAGAGACTGCCACTGGATTTAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | CAATTCCAACCCGGCTGGCACCAACACAGGAAGGATAATTATTCTGGTGCAGAGGGCCCCGGCTGTTCTTaGCGAAGAAGATGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFQPGWHQHRKDNYSGAEGPGCS*RRRWPS Trigger: GCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCC...CTCTGCACCAGAATAATTATCCTTCCTGTGTTGGTGCCAGCCGGGTTGGAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CAA 72 bp | AGGCGAGAAAAGCCGGTGGCACGTGTATCCAATCCCTaGTATGTCAGGACAGGGAAGAAGACCGCGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RREKPVARVSNP*YVRTGKKTAVN Trigger: GTTCACCGCGGTCTTCTTCCCTGTCCTGACATACAAGGGATTGGATACACGTGCCACCGGCTTTTCTCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | GTAATTAACTTGTTTTTAAAACTCAGGTACCAGGCCCTCAGCCTCTATGCTCAGCCCGCGGCGCGATGCTaGTGTGGCTGCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VINLFLKLRYQALSLYAQPAARC*CGCRSR Trigger: CCTGCTCCTGCAGCCACAGCAGCATCGCGCCGCGGG...CTGAGCATAGAGGCTGAGGGCCTGGTACCTGAGTTTTAAAAACAAGTTAATTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTAAATCCAGTGGCAGTCTCTCAGCAGCAGACAGCATTTCCACAGCAGAGCAACAGCTAGAGTGTTaGCATAGCCATGAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CPKSSGSLSAADSISTAEQQLEC*HSHEGP Trigger: GGGGCCCTCATGGCTATGTCAACACTCTAGCTGTTG...CTCTGCTGTGGAAATGCTGTCTGCTGCTGAGAGACTGCCACTGGATTTAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGACCATGTCTCTTGATGTACCAAGGAAATGTCAGCCTTCCTGTCCTAAATCACGACCAGGAGGCTaGGCAGCGCCAGCAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVTMSLDVPRKCQPSCPKSRPGG*AAPARA Trigger: TGCCCTTGCTGGCGCTGCGCAGCCTCCTGGTCGTGA...TTTAGGACAGGAAGGCTGACATTTCCTTGGTACATCAAGAGACATGGTCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | CAATTCCAACCCGGCTGGCACCAACACAGGAAGGATAATTATTCTGGTGCAGAGTCTTGGCGAAGAAGATaGCCCAGCCCACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QFQPGWHQHRKDNYSGAESWRRR*PSPPPP Trigger: TGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGA...CTCTGCACCAGAATAATTATCCTTCCTGTGTTGGTGCCAGCCGGGTTGGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAAATCCAGTGGCAGTCTCTCAGCAGCAGACAGCATTTCCACAGCAGAGTGGTGGTGGAGCTGGTaGTGGTTGTGCATGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPKSSGSLSAADSISTAEWWWSW*WLCMLF Trigger: GAACAGCATGCACAACCACCACCAGCTCCACCACCA...CTCTGCTGTGGAAATGCTGTCTGCTGCTGAGAGACTGCCACTGGATTTAGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGACCATGTCTCTTGATGTACCAAGGAAATGTCAGCCTTCCTGTCCTAAAAGAGGCGGAGCCGAGTaGTGGTGGAGCTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVTMSLDVPRKCQPSCPKRGGAE*WWSWWW Trigger: CCACCACCAGCTCCACCACCACTCGGCTCCGCCTCT...TTTAGGACAGGAAGGCTGACATTTCCTTGGTACATCAAGAGACATGGTCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCATGGTTAACAGGCACAGTCTTGGTTGGATGACACAGGGCACTCCTGTTAGGACGGAGCTGCTGTaGCAGTGTTCAGCTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QSMVNRHSLGWMTQGTPVRTELL*QCSART Trigger: TGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCT...AACAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| 3UTR CAA 72 bp | CTCCTTGTTGGGGTGAGTATACCCCAGCCTGGCTCCTaGTGCCTTCTGAACCTTGATTGCCCTCAGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: LLVGVSIPQPGS*CLLNLDCPQNT Trigger: TGTATTCTGAGGGCAATCAAGGTTCAGAAGGCACAAGGAGCCAGGCTGGGGTATACTCACCCCAACAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGAACCCCTTTCCTCCATTCTCCCCTACAGGAATAGGAATCAGGATGAAAAGCGATGGAGTAGATaGGCCAGGCCAGGTACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPEPLSSILPYRNRNQDEKRWSR*ARPGTQ Trigger: TTGCGTACCTGGCCTGGCTCATCTACTCCATCGCTT...TTCATCCTGATTCCTATTCCTGTAGGGGAGAATGGAGGAAAGGGGTTCAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS GCA 90 bp | AGACACGTGCCCAGGAAGCAGCCCGCGGCGCGATGCTGCTGTGGCTaGAGGAGCAGGGGACCCGCCGAGCCCGGGGGCGCGCCCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHVPRKQPAARCCCG*RSRGPAEPGGAPAS Trigger: CGAGGCGGGCGCGCCCCCGGGCTCGGCGGGTCCCCTGCTCCTGCAGCCACAGCAGCATCGCGCCGCGGGCTGCTTCCTGGGCACGTGTCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS GCA 90 bp | TCCAGCAGGTCCAGACACGTGCCCAGGAAGCAGCCCGCGGCGCGATaGTGCTGTGGCTGCAGGAGCAGGGGACCCGCCGAGCCCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSRHVPRKQPAAR*CCGCRSRGPAEPGG Trigger: GCCCCCGGGCTCGGCGGGTCCCCTGCTCCTGCAGCCACAGCAGCATCGCGCCGCGGGCTGCTTCCTGGGCACGTGTCTGGACCTGCTGGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
||
| CDS CCA 90 bp | GCGGATAGGTGCAGAGGCGGAGCCGAGTGGTGGTGGAGCTGGTGGTaGTTGTGCATGCTGTTCGCTGGGCCGCCCCGACGGCCCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ADRCRGGAEWWWSWW*LCMLFAGPPRRPRL Trigger: CAGCCGGGGCCGTCGGGGCGGCCCAGCGAACAGCATGCACAACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | GCTGCGGATAGGTGCAGAGGCGGAGCCGAGTGGTGGTGGAGCTGGTaGTGGTTGTGCATGCTGTTCGCTGGGCCGCCCCGACGGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: AADRCRGGAEWWWSW*WLCMLFAGPPRRPR Trigger: CCGGGGCCGTCGGGGCGGCCCAGCGAACAGCATGCACAACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | GCCGCTGCGGATAGGTGCAGAGGCGGAGCCGAGTGGTGGTGGAGCTaGTGGTGGTTGTGCATGCTGTTCGCTGGGCCGCCCCGACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: AAADRCRGGAEWWWS*WWLCMLFAGPPRRP Trigger: GGGCCGTCGGGGCGGCCCAGCGAACAGCATGCACAACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGCAGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | CCCGCCGACGCCGCTGCGGATAGGTGCAGAGGCGGAGCCGAGTGGTaGTGGAGCTGGTGGTGGTTGTGCATGCTGTTCGCTGGGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PADAAADRCRGGAEW*WSWWWLCMLFAGPP Trigger: GGGCGGCCCAGCGAACAGCATGCACAACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGCAGCGGCGTCGGCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | GCCCCCGCCGACGCCGCTGCGGATAGGTGCAGAGGCGGAGCCGAGTaGTGGTGGAGCTGGTGGTGGTTGTGCATGCTGTTCGCTGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: APADAAADRCRGGAE*WWSWWWLCMLFAGP Trigger: CGGCCCAGCGAACAGCATGCACAACCACCACCAGCTCCACCACCACTCGGCTCCGCCTCTGCACCTATCCGCAGCGGCGTCGGCGGGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | TCGCTGGGCCGCCCCGACGGCCCCGGCTGTTCTTGGCGAAGAAGATaGCCCAGCCCACCACCACCACGAGGTCGGTGGCGATCCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLGRPDGPGCSWRRR*PSPPPPRGRWRSKS Trigger: GCTCTTGGATCGCCACCGACCTCGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCCCAGCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 90 bp | GGAGTAGATGAGCCAGGCCAGGTACGCAAAAGCGAACTCGCCCGCTaGCCCAGTCGTCCCCGGCCCGGCTCCGGAGCCTCCAGAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GVDEPGQVRKSELAR*PSRPRPGSGASRTS Trigger: GGAGGTTCTGGAGGCTCCGGAGCCGGGCCGGGGACGACTGGGGCAGCGGGCGAGTTCGCTTTTGCGTACCTGGCCTGGCTCATCTACTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 90 bp | GCGGCTGCAGCTTCCGGGCCCGGAGGTCTGACCCCAGGACGGAGCTaGTGTGGCAGTGTTCAGCTCGTACAGCCAGAGCACTGGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAAASGPGGLTPGRS*CGSVQLVQPEHWGG Trigger: GCCTCCCCAGTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 90 bp | AGGGCACGTCCACCAGGCAGCCGCCCAGCAAACGTAAAAGGCGGCTaGAGCTTCCGGGCCCGGAGGTCTGACCCCAGGACGGAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RARPPGSRPANVKGG*SFRARRSDPRTELL Trigger: CAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGCCTTTTACGTTTGCTGGGCGGCTGCCTGGTGGACGTGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | TGTGCATGCTGTTCGCTGGGCCGCCCCGACGGCCCCGGCTGTTCTTaGCGAAGAAGATGGCCCAGCCCACCACCACCACGAGGTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CACCSLGRPDGPGCS*RRRWPSPPPPRGRW Trigger: CCACCGACCTCGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCCCAGCGAACAGCATGCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | GGGAGGGGCAGAGGGAGGAGCACCATAGCTGCTTCTGGCCCGACTTaGGGATACCCAACTCCCCCGGTCCCAGCAGCCCTCCAAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GRGRGRSTIAASGPT*GYPTPPVPAALQGL Trigger: GAGGCCTTGGAGGGCTGCTGGGACCGGGGGAGTTGGGTATCCCCAAGTCGGGCCAGAAGCAGCTATGGTGCTCCTCCCTCTGCCCCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | TGCAGCTTCCGGGCCCGGAGGTCTGACCCCAGGACGGAGCTGCTGTaGCAGTGTTCAGCTCGTACAGCCAGAGCACTGGGGAGGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: CSFRARRSDPRTELL*QCSARTARALGRQE Trigger: CTCTTGCCTCCCCAGTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS TCA 90 bp | CCCAGCAAACGTAAAAGGCGGCTGCAGCTTCCGGGCCCGGAGGTCTaGCCCCAGGACGGAGCTGCTGTGGCAGTGTTCAGCTCGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: PSKRKRRLQLPGPEV*PQDGAAVAVFSSYS Trigger: GCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGCCTTTTACGTTTGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 90 bp | CACGAGGTCGGTGGCGATCCAAGAGCACCAGTACAGGTCAGTGACTaGAATGAGGTACAGGTCCAGCAGACCGCCCTGCGCCAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HEVGGDPRAPVQVSD*NEVQVQQTALRQQQ Trigger: CTGCTGCTGGCGCAGGGCGGTCTGCTGGACCTGTACCTCATTGCAGTCACTGACCTGTACTGGTGCTCTTGGATCGCCACCGACCTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 90 bp | GGACGGAGCTGCTGTGGCAGTGTTCAGCTCGTACAGCCAGAGCACTaGGGAGGCAAGAGTGAGGAAGTAGACGGCGATGAGCAGGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRSCCGSVQLVQPEH*GGKSEEVDGDEQVA Trigger: CGCTACCTGCTCATCGCCGTCTACTTCCTCACTCTTGCCTCCCCAGTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGGCTGCTAAGTTACTAGTCAGTGACTTGGCACTCTGGGCCTTCCCCTGTCGGCCCCGGCTGTTCTaGGCGAAGAAGATGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GLAAKLLVSDLALWAFPCRPRLF*AKKMAQ Trigger: CTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCG...ACAGGGGAAGGCCCAGAGTGCCAAGTCACTGACTAGTAACTTAGCAGCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS-3UTR CAA 90 bp | GAGGAAGACCCTGGGCGAGCTTCTCCCTTGGAGTACAGCAACCGAGCAACAACTGCGGGCACCAGTGGCTaGCTGATGCTAATGCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: EEDPGRASPLEYSNRATTAGTSG*LMLMLS Trigger: CGAGAGCATTAGCATCAGCAAGCCACTGGTGCCCGC...AGTTGTTGCTCGGTTGCTGTACTCCAAGGGAGAAGCTCGCCCAGGGTCTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGAACCCCTTTCCTCCATTCTCCCCTACAGGAATAGGAATCAGGATGAATGGAGCTGGTGGTGGTaGTGCATGCTGTTCGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LPEPLSSILPYRNRNQDEWSWWW*CMLFAG Trigger: CCCAGCGAACAGCATGCACAACCACCACCAGCTCCA...TTCATCCTGATTCCTATTCCTGTAGGGGAGAATGGAGGAAAGGGGTTCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS-3UTR CAA 90 bp | ACAGCATTTCCACAGCAGAGGGACAGCTATCCAAACAGTAGAAAGAGGGTGGGTAGGAAAAAGAGATTCTaGAGCATAAAGATGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: TAFPQQRDSYPNSRKRVGRKKRF*SIKMDS Trigger: GCTGTCCATCTTTATGCTCAAGAATCTCTTTTTCCT...ACCCACCCTCTTTCTACTGTTTGGATAGCTGTCCCTCTGCTGTGGAAATGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | GAGCCAGGCCAGGTACGCAAAAGCGAACTCGCCCGCTaGCCCAGTCGTCCCCGGCCCGGCTCCGGAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EPGQVRKSELAR*PSRPRPGSGAS Trigger: GGAGGCTCCGGAGCCGGGCCGGGGACGACTGGGGCAGCGGGCGAGTTCGCTTTTGCGTACCTGGCCTGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | AGACACGTGCCCAGGAAGCAGCCCGCGGCGCGATGCTaGTGTGGCTGCAGGAGCAGGGGACCCGCCGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RHVPRKQPAARC*CGCRSRGPAEP Trigger: GGGCTCGGCGGGTCCCCTGCTCCTGCAGCCACAGCAGCATCGCGCCGCGGGCTGCTTCCTGGGCACGTGTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 72 bp | CGCCCCGACGGCCCCGGCTGTTCTTGGCGAAGAAGATaGCCCAGCCCACCACCACCACGAGGTCGGTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RPDGPGCSWRRR*PSPPPPRGRWR Trigger: TCGCCACCGACCTCGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | CCACCAGGCAGCCGCCCAGCAAACGTAAAAGGCGGCTaGAGCTTCCGGGCCCGGAGGTCTGACCCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: PPGSRPANVKGG*SFRARRSDPRT Trigger: CGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGCCTTTTACGTTTGCTGGGCGGCTGCCTGGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CAA 90 bp | TTGTGCATGCTGTTCGCTGGGCCGCCCCGACGGCCCCGGCTGTTCTaGGCGAAGAAGATGGCCCAGCCCACCACCACCACGAGGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LCMLFAGPPRRPRLF*AKKMAQPTTTTRSV Trigger: CACCGACCTCGTGGTGGTGGTGGGCTGGGCCATCTTCTTCGCCAAGAACAGCCGGGGCCGTCGGGGCGGCCCAGCGAACAGCATGCACAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | TGGACAGCGGCTGTTGGTAGCTCACGACCAGGAGGCTaGGCAGCGCCAGCAAGGGCACGTCCACCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WTAAVGSSRPGG*AAPARARPPGS Trigger: GCTGCCTGGTGGACGTGCCCTTGCTGGCGCTGCGCAGCCTCCTGGTCGTGAGCTACCAACAGCCGCTGTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 72 bp | CGGGCCCGGAGGTCTGACCCCAGGACGGAGCTGCTGTaGCAGTGTTCAGCTCGTACAGCCAGAGCACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RARRSDPRTELL*QCSARTARALG Trigger: CCCCAGTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS TCA 72 bp | CGTAAAAGGCGGCTGCAGCTTCCGGGCCCGGAGGTCTaGCCCCAGGACGGAGCTGCTGTGGCAGTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RKRRLQLPGPEV*PQDGAAVAVFS Trigger: GCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGCTGCAGCCGCCTTTTACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | GCTTCCGGGCCCGGAGGTCTGACCCCAGGACGGAGCTaGTGTGGCAGTGTTCAGCTCGTACAGCCAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASGPGGLTPGRS*CGSVQLVQPEH Trigger: GTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCAGCTCCGTCCTGGGGTCAGACCTCCGGGCCCGGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 72 bp | AGAGGGAGGAGCACCATAGCTGCTTCTGGCCCGACTTaGGGATACCCAACTCCCCCGGTCCCAGCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGRSTIAASGPT*GYPTPPVPAAL Trigger: GAGGGCTGCTGGGACCGGGGGAGTTGGGTATCCCCAAGTCGGGCCAGAAGCAGCTATGGTGCTCCTCCCTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CAA 72 bp | CAGAGGGAGGAGCACCATAGCTGCTTCTGGCCCGACTaGGGGATACCCAACTCCCCCGGTCCCAGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: QREEHHSCFWPD*GIPNSPGPSSP Trigger: AGGGCTGCTGGGACCGGGGGAGTTGGGTATCCCCAAGTCGGGCCAGAAGCAGCTATGGTGCTCCTCCCTCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS GCA 72 bp | GGTGGCGATCCAAGAGCACCAGTACAGGTCAGTGACTaGAATGAGGTACAGGTCCAGCAGACCGCCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: GGDPRAPVQVSD*NEVQVQQTALR Trigger: GCGCAGGGCGGTCTGCTGGACCTGTACCTCATTGCAGTCACTGACCTGTACTGGTGCTCTTGGATCGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CCA 72 bp | TGCTGTGGCAGTGTTCAGCTCGTACAGCCAGAGCACTaGGGAGGCAAGAGTGAGGAAGTAGACGGCGATGAG | + |
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Preference number: 6 (lower is better) Translates to: CCGSVQLVQPEH*GGKSEEVDGDE Trigger: CTCATCGCCGTCTACTTCCTCACTCTTGCCTCCCCAGTGCTCTGGCTGTACGAGCTGAACACTGCCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CAA 90 bp | GCCAAGGAAAAAGAGATTCTTGAGCATAAAGATGGACAGCGGCTGTaGGTAGCTCACGACCAGGAGGCTGCGCAGCGCCAGCAAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AKEKEILEHKDGQRL*VAHDQEAAQRQQGH Trigger: GTGCCCTTGCTGGCGCTGCGCAGCCTCCTGGTCGTGAGCTACCAACAGCCGCTGTCCATCTTTATGCTCAAGAATCTCTTTTTCCTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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| CDS CAA 72 bp | AAAGAGATTCTTGAGCATAAAGATGGACAGCGGCTGTaGGTAGCTCACGACCAGGAGGCTGCGCAGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KEILEHKDGQRL*VAHDQEAAQRQ Trigger: CTGGCGCTGCGCAGCCTCCTGGTCGTGAGCTACCAACAGCCGCTGTCCATCTTTATGCTCAAGAATCTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178687.2 |
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