Pregenerated sensors for TMEM120B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054434Ensembl transcript IDs: ENSMUST00000067505.15, ENSMUST00000111619.10, ENSMUST00000161059.8
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGAGTCCGCCAGAACTCCAACAACCCAGAGGCTGGGCGCCCTCTaGTGGAGGCCGTCCGCGTCCTTAACACCCTGCCACATGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: QESARTPTTQRLGAL*WRPSASLTPCHMEV Trigger: GACCTCCATGTGGCAGGGTGTTAAGGACGCGGACGGCCTCCACCAGAGGGCGCCCAGCCTCTGGGTTGTTGGAGTTCTGGCGGACTCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR TCA 90 bp | CCAGTGAGGGATTCAAATGATAGGAGTAGGAAGAGAGGGGTTCCCTaGGGCTTCTGGCCCCTCCCTGAAAGACAGACACAGGCCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: PVRDSNDRSRKRGVP*GFWPLPERQTQACP Trigger: TGGGCAGGCCTGTGTCTGTCTTTCAGGGAGGGGCCAGAAGCCTCAGGGAACCCCTCTCTTCCTACTCCTATCATTTGAATCCCTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR GCA 90 bp | CTTACAGAAGAGGTGGTGGCCCAGGACAGGGGAGGCTCCACAGGATaGTCAAAGTTTCATTCCTCCCGGTGCCTGGGACACAGTAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LTEEVVAQDRGGSTG*SKFHSSRCLGHSKV Trigger: TACTTTACTGTGTCCCAGGCACCGGGAGGAATGAAACTTTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACCTCTTCTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR CCA 90 bp | TTCTCTGAGAACTTAAATATTTGTCCACCGCAGAAGGTGGGGCTGTaGGAGGCTTACAGAAGAGGTGGTGGCCCAGGACAGGGGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FSENLNICPPQKVGL*EAYRRGGGPGQGRL Trigger: GAGCCTCCCCTGTCCTGGGCCACCACCTCTTCTGTAAGCCTCCCACAGCCCCACCTTCTGCGGTGGACAAATATTTAAGTTCTCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCCTGCGGTTCCGGAGACCAAGGCAAGAGACAACACAGGTAGGTTCTCTGTGGCCCTGCTCCCGGTaGTGCTGCTGGCCCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: AGLRFRRPRQETTQVGSLWPCSR*CCWPLR Trigger: TCTCAGGGGCCAGCAGCATCACCGGGAGCAGGGCCA...CAGAGAACCTACCTGTGTTGTCTCTTGCCTTGGTCTCCGGAACCGCAGGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGTGGTGGCCCAGGACAGGGGAGGCTCCACAGGATGCTCAAAGTTTCATGCCCATGGCTACCACTaGCCGGCAGCCAGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: EEVVAQDRGGSTGCSKFHAHGYH*PAARVL Trigger: CAGCACCCTGGCTGCCGGTCAGTGGTAGCCATGGGC...ATGAAACTTTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACCTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCAAGTCTATGAAGGTGGCTGGAGGGTTCAGGCACCCAAGAGTCCGCCAAGTGGCCAGCAGGCCTaGGGTTCCGGAGACCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SQQVYEGGWRVQAPKSPPSGQQA*GSGDQG Trigger: GCCTTGGTCTCCGGAACCGCAGGCCTGCTGGCCACT...TGGCGGACTCTTGGGTGCCTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGCCCAGGACAGGGGAGGCTCCACAGGATGCTCAAAGTTTCATTCCTCCTTCTGGCCCCTCCCTaGAAGACAGACACAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGGPGQGRLHRMLKVSFLLLAPP*KTDTGL Trigger: CAGGCCTGTGTCTGTCTTTCAGGGAGGGGCCAGAAG...GAGGAATGAAACTTTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGCAAGTCTATGAAGGTGGCTGGAGGGTTCAGGCACCCAAGAGTCCGCCATTACAGAAGAGGTGGTaGCCCAGGACAGGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SQQVYEGGWRVQAPKSPPLQKRW*PRTGEA Trigger: AGCCTCCCCTGTCCTGGGCCACCACCTCTTCTGTAA...TGGCGGACTCTTGGGTGCCTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCGGTTCCGGAGACCAAGGCAAGAGACAACACAGGTAGGTTCTCTGAGACAGAAGGTGGGGCTGTaGGAGGCTTACAGAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GLRFRRPRQETTQVGSLRQKVGL*EAYRRG Trigger: ACCTCTTCTGTAAGCCTCCCACAGCCCCACCTTCTG...TCTCAGAGAACCTACCTGTGTTGTCTCTTGCCTTGGTCTCCGGAACCGCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCAAGTCTATGAAGGTGGCTGGAGGGTTCAGGCACCCAAGAGTCCGCCAGGAGGCTCCACAGGATaGTCAAAGTTTCATTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQQVYEGGWRVQAPKSPPGGSTG*SKFHSS Trigger: GGAGGAATGAAACTTTGAGCATCCTGTGGAGCCTCC...TGGCGGACTCTTGGGTGCCTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR-3UTR TCA 90 bp | AATGAAGGACAAATCGACACGCCACAGCACCCAGAAGAAGAATTATGGTCAGGTACTTGGCCTGATTGCTaGGGAGGGTCACGCTCACGT | + |
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Preference number: 2 (lower is better) Translates to: NEGQIDTPQHPEEELWSGTWPDC*GGSRSR Trigger: ACGTGAGCGTGACCCTCCTCAGCAATCAGGCCAAGT...ACCTGACCATAATTCTTCTTCTGGGTGCTGTGGCGTGTCGATTTGTCCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAAGTCAGCATCACTCCAGACAGGAACGTGGAGACATAATGGTGAGACACCTCGAATGGTCAAGGTaGAGTAATACCACACGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RPSQHHSRQERGDIMVRHLEWSR*SNTTRA Trigger: TGCTCGTGTGGTATTACTGCACCTTGACCATTCGAG...GTGTCTCACCATTATGTCTCCACGTTCCTGTCTGGAGTGATGCTGACTTGGCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGCGTGGCCCCTGAGATGTTaGTGCCCATGGCTACCACTG | + |
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Preference number: 2 (lower is better) Translates to: RPDIKYVINRELGQVNTAWPLRC*CPWLPL Trigger: CAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCA...CGCAGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| 3UTR CCA 72 bp | GCCAGAACTCCAACAACCCAGAGGCTGGGCGCCCTCTaGTGGAGGCCGTCCGCGTCCTTAACACCCTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: ARTPTTQRLGAL*WRPSASLTPCH Trigger: GTGGCAGGGTGTTAAGGACGCGGACGGCCTCCACCAGAGGGCGCCCAGCCTCTGGGTTGTTGGAGTTCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR GCA 72 bp | GGCTTCTGGCCCCTCCCTGAAAGACAGACACAGGCCTaGCCACGGCCATTACACAGAGCTCCAGGGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GFWPLPERQTQA*PRPLHRAPGKA Trigger: TGCCTTCCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAGGGGCCAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR GCA 72 bp | GAGGCTGCATCTCTTTCCCCCAGTGGCCAGCAGGCCTaGGGTTCCGGAGACCAAGGCAAGAGACAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: EAASLSPSGQQA*GSGDQGKRQHR Trigger: CCTGTGTTGTCTCTTGCCTTGGTCTCCGGAACCGCAGGCCTGCTGGCCACTGGGGGAAAGAGATGCAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR CCA 72 bp | GAAGGTGGGGCTGTGGGAGGCTTACAGAAGAGGTGGTaGCCCAGGACAGGGGAGGCTCCACAGGATGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: EGGAVGGLQKRW*PRTGEAPQDAQ Trigger: TTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACCTCTTCTGTAAGCCTCCCACAGCCCCACCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR GCA 72 bp | CACTCAAACTGGACCTGTTTGCCCCTCCACTCTTGCTaGTTCCTGGACCTCACAGGGTCACACCCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: HSNWTCLPLHSC*FLDLTGSHPGL Trigger: CAGCCCAGGGTGTGACCCTGTGAGGTCCAGGAAGCAGCAAGAGTGGAGGGGCAAACAGGTCCAGTTTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR TCA 72 bp | GCCTGGCTCCTATGCCAAGGACTCTCAGCAAGTCTATaGAGGTGGCTGGAGGGTTCAGGCACCCAAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: AWLLCQGLSASL*RWLEGSGTQES Trigger: GGACTCTTGGGTGCCTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGAGTCCTTGGCATAGGAGCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR CCA 72 bp | GAGATGAAGAGAGGAAGGGAATGGGTGACCTCCGAATaGCTGAAGTTCCAGTCACAAGGAGGGCCTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: EMKRGREWVTSE*LKFQSQGGPGS Trigger: GGAGCCAGGCCCTCCTTGTGACTGGAACTTCAGCCATTCGGAGGTCACCCATTCCCTTCCTCTCTTCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR GCA 72 bp | GGCTCCACAGGATGCTCAAAGTTTCATTCCTCCCGGTaGCTGGGACACAGTAAAGTAGCAGGTCGGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GSTGCSKFHSSR*LGHSKVAGRLK Trigger: CTTTAGCCGACCTGCTACTTTACTGTGTCCCAGGCACCGGGAGGAATGAAACTTTGAGCATCCTGTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR CCA 72 bp | AACTTAAATATTTGTCCACCGCAGAAGGTGGGGCTGTaGGAGGCTTACAGAAGAGGTGGTGGCCCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: NLNICPPQKVGL*EAYRRGGGPGQ Trigger: CTGTCCTGGGCCACCACCTCTTCTGTAAGCCTCCCACAGCCCCACCTTCTGCGGTGGACAAATATTTAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| 3UTR TCA 72 bp | CATACTCATCCTTGTAAGCAAACTTGGCCTGATTGCTaGGGAGGGTCACGCTCACGTTGCCAAGAACCAGAT | + |
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Preference number: 3 (lower is better) Translates to: HTHPCKQTWPDC*GGSRSRCQEPD Trigger: ATCTGGTTCTTGGCAACGTGAGCGTGACCCTCCTCAGCAATCAGGCCAAGTTTGCTTACAAGGATGAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| 3UTR CAA 72 bp | GCCCTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTaGCTGCCCATGGCTACCACTGACCGGCAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALLPVMLLAPEM*LPMATTDRQPG Trigger: CCCTGGCTGCCGGTCAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR GCA 90 bp | GCCCTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCTCTCCCTCCAGCTCGTaGCACTCGCGCTCGCAACGC | + |
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Preference number: 4 (lower is better) Translates to: ALLPVMLLAPEMLLPMATSPSSS*HSRSQR Trigger: GCGTTGCGAGCGCGAGTGGCACGAGCTGGAGGGAGA...GGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | GCCCTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCGCCTCTTCTGCTTGCTaGTGGAGGTGCTGCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: ALLPVMLLAPEMLLPMATASSAC*WRCCTA Trigger: CGCTGTGCAGCACCTCCATCAGCAAGCAGAAGAGGC...GGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR GCA 90 bp | GTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTGACCGGCAGTCTCCCTCCAGCTCGTaGCACTCGCGCTCGCAACGC | + |
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Preference number: 4 (lower is better) Translates to: VMLLAPEMLLPMATTDRQSPSSS*HSRSQR Trigger: GCGTTGCGAGCGCGAGTGGCACGAGCTGGAGGGAGA...CTGCCGGTCAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | GGAACGCCCAGCAGTCTTAGGTCCCAAGGCCCCCAGGTGGCACAAGGGTCCGGAACTTGGCCTGATTGCTaGGGAGGGTCACGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: GTPSSLRSQGPQVAQGSGTWPDC*GGSRSR Trigger: ACGTGAGCGTGACCCTCCTCAGCAATCAGGCCAAGT...TCCGGACCCTTGTGCCACCTGGGGGCCTTGGGACCTAAGACTGCTGGGCGTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | CCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTGACCGGCGCCACATCCAGGATTaGAACCCTTCCACTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PVMLLAPEMLLPMATTDRRHIQD*NPSTVR Trigger: CCTCACAGTGGAAGGGTTCCAATCCTGGATGTGGCG...CCGGTCAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGAACCCTTCCACTGTaGGGTCCAGGTGGTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLPERQTQACPRPLHRAPGTLPL*GPGGSS Trigger: AGAGGAACCACCTGGACCTCACAGTGGAAGGGTTCC...TGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CCA 90 bp | AGCAGGCCTGCGGTTCCGGAGACCAAGGCAAGAGACAACACAGGTAGGTTCTCTACTGTGAGGTCCAGGTaGTTCCTCTCCCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRPAVPETKARDNTGRFSTVRSR*FLSPRA Trigger: GGCCCTGGGGGAGAGGAACCACCTGGACCTCACAGT...AGAGAACCTACCTGTGTTGTCTCTTGCCTTGGTCTCCGGAACCGCAGGCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR TCA 90 bp | CTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGAGAGCTCAAACAGGGTaGCGGCATTGTAGAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LPERQTQACPRPLHRAPGRAQTG*RHCRAA Trigger: GGCAGCTCTACAATGCCGTCACCCTGTTTGAGCTCT...CCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR GCA 90 bp | CTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTTTCAGGTGCCTCTTCTaGTTGCTGATGGAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPVMLLAPEMLLPMATTFRCLF*LLMEVL Trigger: CAGCACCTCCATCAGCAAGCAGAAGAGGCACCTGAA...AGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR GCA 90 bp | GGAACGCCCAGCAGTCTTAGGTCCCAAGGCCCCCAGGTGGCACAAGGGTCCGGACTCGAATGGTCAAGGTaGAGTAATACCACACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTPSSLRSQGPQVAQGSGLEWSR*SNTTRA Trigger: TGCTCGTGTGGTATTACTGCACCTTGACCATTCGAG...TCCGGACCCTTGTGCCACCTGGGGGCCTTGGGACCTAAGACTGCTGGGCGTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTTCCTCATGGCTGGAATaGCGCTTGTACCTCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLPVMLLAPEMLLPMATTSSWLE*RLYLWS Trigger: ACTCCAGAGGTACAAGCGCCATTCCAGCCATGAGGA...AGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR TCA 90 bp | GGCTCCTATGCCAAGGACTCTCAGCAAGTCTATGAAGGTGGCTGGAGGGTTCAGGCCTCTTCTGCTTGCTaGTGGAGGTGCTGCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: GSYAKDSQQVYEGGWRVQASSAC*WRCCTA Trigger: CGCTGTGCAGCACCTCCATCAGCAAGCAGAAGAGGC...CTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGAGTCCTTGGCATAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR GCA 90 bp | CTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGTACCTCTGGAGTGTGTaGTTCAGGTCCTTCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPERQTQACPRPLHRAPGYLWSV*FRSFRC Trigger: GCACCTGAAGGACCTGAAGCACACACTCCAGAGGTA...CCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CCA 90 bp | CCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTGACCGGGGATGCTCTCTCGAATaGTCAAGGTGCAGTAATACC | + |
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Preference number: 4 (lower is better) Translates to: PVMLLAPEMLLPMATTDRGCSLE*SRCSNT Trigger: GGTATTACTGCACCTTGACCATTCGAGAGAGCATCC...CCGGTCAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | CCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTGACCGGTTGTGGAGTTTGGCATaGACAACTTTGAGCGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PVMLLAPEMLLPMATTDRLWSLA*TTLSVV Trigger: GACCACGCTCAAAGTTGTCCATGCCAAACTCCACAA...CCGGTCAGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | CTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTTGGCATGGACAACTTTaGGCGTGGTCAGAAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: LLPVMLLAPEMLLPMATTWHGQL*AWSENC Trigger: GCAATTTTCTGACCACGCTCAAAGTTGTCCATGCCA...AGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCACTGGATGCTCTCTCGAATaGTCAAGGTGCAGTAATACC | + |
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Preference number: 4 (lower is better) Translates to: LLPVMLLAPEMLLPMATTGCSLE*SRCSNT Trigger: GGTATTACTGCACCTTGACCATTCGAGAGAGCATCC...AGTGGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCATGGCATGGACAACTTTaGGCGTGGTCAGAAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: PLPERQTQACPRPLHRAPWHGQL*AWSENC Trigger: GCAATTTTCTGACCACGCTCAAAGTTGTCCATGCCA...TGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR GCA 90 bp | GACAAATCGACACGCCACAGCACCCAGAAGAAGAATTATGGTCAGGTAGAGCTTTCTCCCTCCAGCTCGTaGCACTCGCGCTCGCAACGC | + |
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Preference number: 4 (lower is better) Translates to: DKSTRHSTQKKNYGQVELSPSSS*HSRSQR Trigger: GCGTTGCGAGCGCGAGTGGCACGAGCTGGAGGGAGA...AAGCTCTACCTGACCATAATTCTTCTTCTGGGTGCTGTGGCGTGTCGATTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| CDS-3UTR CCA 90 bp | CTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGTTGTGGAGTTTGGCATaGACAACTTTGAGCGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPERQTQACPRPLHRAPGLWSLA*TTLSVV Trigger: GACCACGCTCAAAGTTGTCCATGCCAAACTCCACAA...CCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR GCA 90 bp | AAGAGGTGGTGGCCCAGGACAGGGGAGGCTCCACAGGATGCTCAAAGTTTCATTTTCAGGTGCCTCTTCTaGTTGCTGATGGAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRWWPRTGEAPQDAQSFIFRCLF*LLMEVL Trigger: CAGCACCTCCATCAGCAAGCAGAAGAGGCACCTGAA...AATGAAACTTTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGCCCAGGACAGGGGAGGCTCCACAGGATGCTCAAAGTTTCATTCCTCTCTTTGCATTCCTCATaGGTGGAGAGCTCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGPGQGRLHRMLKVSFLSLHSS*VESSNR Trigger: CCTGTTTGAGCTCTCCACCCATGAGGAATGCAAAGA...GAGGAATGAAACTTTGAGCATCCTGTGGAGCCTCCCCTGTCCTGGGCCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR GCA 90 bp | AGCAGGCCTGCGGTTCCGGAGACCAAGGCAAGAGACAACACAGGTAGGTTCTCTCTCGAATGGTCAAGGTaGAGTAATACCACACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRPAVPETKARDNTGRFSLEWSR*SNTTRA Trigger: TGCTCGTGTGGTATTACTGCACCTTGACCATTCGAG...AGAGAACCTACCTGTGTTGTCTCTTGCCTTGGTCTCCGGAACCGCAGGCCTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR TCA 90 bp | AATGAAGGACAAATCGACACGCCACAGCACCCAGAAGAAGAATTATGGTCAGGTGCCTCTTCTGCTTGCTaGTGGAGGTGCTGCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: NEGQIDTPQHPEEELWSGASSAC*WRCCTA Trigger: CGCTGTGCAGCACCTCCATCAGCAAGCAGAAGAGGC...ACCTGACCATAATTCTTCTTCTGGGTGCTGTGGCGTGTCGATTTGTCCTTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| CDS-3UTR GCA 90 bp | GACAAATCGACACGCCACAGCACCCAGAAGAAGAATTATGGTCAGGTAGAGCTTTACCTCTGGAGTGTGTaGTTCAGGTCCTTCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DKSTRHSTQKKNYGQVELYLWSV*FRSFRC Trigger: GCACCTGAAGGACCTGAAGCACACACTCCAGAGGTA...AAGCTCTACCTGACCATAATTCTTCTTCTGGGTGCTGTGGCGTGTCGATTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| CDS-3UTR CCA 90 bp | ATAATGGTGAGACACCCACCAGCCCTTGATTCTGGAACCATTGCTGATGAGGATTCCTCATGGCTGGAATaGCGCTTGTACCTCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: IMVRHPPALDSGTIADEDSSWLE*RLYLWS Trigger: ACTCCAGAGGTACAAGCGCCATTCCAGCCATGAGGA...ATCCTCATCAGCAATGGTTCCAGAATCAAGGGCTGGTGGGTGTCTCACCATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| CDS-3UTR GCA 90 bp | AGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGCGAGCCTCTGGAGTGTGTaGTTCAGGTCCTTCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RPDIKYVINRELGQVNTASLWSV*FRSFRC Trigger: GCACCTGAAGGACCTGAAGCACACACTCCAGAGGCT...CGCAGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | AGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGCGCGCCACATCCAGGATTaGAACCCTTCCACTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RPDIKYVINRELGQVNTARHIQD*NPSTVR Trigger: CCTCACAGTGGAAGGGTTCCAATCCTGGATGTGGCG...CGCAGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR TCA 90 bp | GGAAGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTAGAGCTCAAACAGGGTaGCGGCATTGTAGAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GRPDIKYVINRELGQVNTRAQTG*RHCRAA Trigger: GGCAGCTCTACAATGCCGTCACCCTGTTTGAGCTCT...AGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CCA 90 bp | AGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGCGTCTTTGCATTCCTCATaGGTGGAGAGCTCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: RPDIKYVINRELGQVNTASLHSS*VESSNR Trigger: CCTGTTTGAGCTCTCCACCCATGAGGAATGCAAAGA...CGCAGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CAA 90 bp | GGAACGCCCAGCAGTCTTAGGTCCCAAGGCCCCCAGGTGGCACAAGGGTCCGGAAGGTGCCTCTTCTGCTaGCTGATGGAGGTGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: GTPSSLRSQGPQVAQGSGRCLFC*LMEVLH Trigger: GTGCAGCACCTCCATCAGCAAGCAGAAGAGGCACCT...TCCGGACCCTTGTGCCACCTGGGGGCCTTGGGACCTAAGACTGCTGGGCGTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGCTCCCGGTGATGCTGCTGGCCCCTGAGATGTTGCTGCCCATGGCTACCCCGCCACATCCAGGATaGGAACCCTTCCACTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ALLPVMLLAPEMLLPMATPPHPG*EPFHCE Trigger: CTCACAGTGGAAGGGTTCCAATCCTGGATGTGGCGG...GGTAGCCATGGGCAGCAACATCTCAGGGGCCAGCAGCATCACCGGGAGCAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS CCA 90 bp | TTGGCGGTCATCTGTTGGATGAGCGCCGCCTCCTCATGGCTGGAATaGCGCTTGTACCTCTGGAGTGTGTGCTTCAGGTCCTTCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LAVICWMSAASSWLE*RLYLWSVCFRSFRC Trigger: GCACCTGAAGGACCTGAAGCACACACTCCAGAGGTACAAGCGCCATTCCAGCCATGAGGAGGCGGCGCTCATCCAACAGATGACCGCCAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000161059.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCTATGCCAAGGACTCTCAGCAAGTCTATGAAGGTGGCTGGAGGGTTCAGCCGCCACATCCAGGATaGGAACCCTTCCACTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GSYAKDSQQVYEGGWRVQPPHPG*EPFHCE Trigger: CTCACAGTGGAAGGGTTCCAATCCTGGATGTGGCGG...CTGAACCCTCCAGCCACCTTCATAGACTTGCTGAGAGTCCTTGGCATAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CAA 90 bp | CTCCCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGAATACCTGCCATTCTTaGCATTCCTCATGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPERQTQACPRPLHRAPGNTCHS*HSSWVE Trigger: CTCCACCCATGAGGAATGCAAAGAATGGCAGGTATT...CCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CAA 90 bp | CCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGAAGTTGGCATGGACAACTTaGAGCGTGGTCAGAAAATTG | + |
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Preference number: 5 (lower is better) Translates to: PERQTQACPRPLHRAPGKLAWTT*SVVRKL Trigger: CAATTTTCTGACCACGCTCAAAGTTGTCCATGCCAA...CTTCCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CAA 90 bp | CCTGAAAGACAGACACAGGCCTGCCCACGGCCATTACACAGAGCTCCAGGGAAGGTCTTGTTTCTGTTCTaGTGGAGTTTGGCATGGACA | + |
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Preference number: 5 (lower is better) Translates to: PERQTQACPRPLHRAPGKVLFLF*WSLAWT Trigger: TGTCCATGCCAAACTCCACAAGAACAGAAACAAGAC...CTTCCCTGGAGCTCTGTGTAATGGCCGTGGGCAGGCCTGTGTCTGTCTTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067505.15 |
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| CDS-3UTR CAA 90 bp | GACAAATCGACACGCCACAGCACCCAGAAGAAGAATTATGGTCAGGTAGAGCTTAGGTGCCTCTTCTGCTaGCTGATGGAGGTGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: DKSTRHSTQKKNYGQVELRCLFC*LMEVLH Trigger: GTGCAGCACCTCCATCAGCAAGCAGAAGAGGCACCT...AAGCTCTACCTGACCATAATTCTTCTTCTGGGTGCTGTGGCGTGTCGATTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161059.8 |
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| CDS-3UTR CAA 90 bp | AGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGCGTTGGCATGGACAACTTaGAGCGTGGTCAGAAAATTG | + |
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Preference number: 5 (lower is better) Translates to: RPDIKYVINRELGQVNTALAWTT*SVVRKL Trigger: CAATTTTCTGACCACGCTCAAAGTTGTCCATGCCAA...CGCAGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS-3UTR CAA 90 bp | GGAAGACCCGATATTAAATATGTTATAAATAGGGAGCTGGGACAGGTTAATACTGTCTTGTTTCTGTTCTaGTGGAGTTTGGCATGGACA | + |
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Preference number: 5 (lower is better) Translates to: GRPDIKYVINRELGQVNTVLFLF*WSLAWT Trigger: TGTCCATGCCAAACTCCACAAGAACAGAAACAAGAC...AGTATTAACCTGTCCCAGCTCCCTATTTATAACATATTTAATATCGGGTCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS CCA 72 bp | GCCGCCTCCTCATGGCTGGAATGGCGCTTGTACCTCTaGAGTGTGTGCTTCAGGTCCTTCAGGTGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AASSWLEWRLYL*SVCFRSFRCLF Trigger: GAAGAGGCACCTGAAGGACCTGAAGCACACACTCCAGAGGTACAAGCGCCATTCCAGCCATGAGGAGGCGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000161059.8 |
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| CDS CAA 72 bp | TGGATGAGCGCCGCCTCCTCATGGCTGGAATGGCGCTaGTACCTCTGGAGTGTGTGCTTCAGGTCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: WMSAASSWLEWR*YLWSVCFRSFR Trigger: CCTGAAGGACCTGAAGCACACACTCCAGAGGTACAAGCGCCATTCCAGCCATGAGGAGGCGGCGCTCATCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000161059.8 |
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| CDS CAA 72 bp | GACATTCTGTCGCTCCTTAATGTTGGCGGTCATCTGTaGGATGAGCGCCGCCTCCTCATGGCTGGAATGGCG | + |
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Preference number: 6 (lower is better) Translates to: DILSLLNVGGHL*DERRLLMAGMA Trigger: CGCCATTCCAGCCATGAGGAGGCGGCGCTCATCCAACAGATGACCGCCAACATTAAGGAGCGACAGAATGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000161059.8 |
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| CDS TCA 72 bp | CTTTGCATTCCTCATGGGTGGAGAGCTCAAACAGGGTaGCGGCATTGTAGAGCTGCCAGAAATGGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LCIPHGWRAQTG*RHCRAARNGHR Trigger: TCTGTGGCCATTTCTGGCAGCTCTACAATGCCGTCACCCTGTTTGAGCTCTCCACCCATGAGGAATGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS CAA 72 bp | AGGAAGGTGAGAGCCAGCACGAATACCTGCCATTCTTaGCATTCCTCATGGGTGGAGAGCTCAAACAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RKVRASTNTCHS*HSSWVESSNRV Trigger: CACCCTGTTTGAGCTCTCCACCCATGAGGAATGCAAAGAATGGCAGGTATTCGTGCTGGCTCTCACCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS CAA 90 bp | TGCTTTGTCTTGTTTCTGTTCTTGTGGAGTTTGGCATGGACAACTTaGAGCGTGGTCAGAAAATTGCCCAGGAAGAGGATGAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CFVLFLFLWSLAWTT*SVVRKLPRKRMRKV Trigger: CACCTTCCTCATCCTCTTCCTGGGCAATTTTCTGACCACGCTCAAAGTTGTCCATGCCAAACTCCACAAGAACAGAAACAAGACAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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| CDS CAA 72 bp | TTGTTTCTGTTCTTGTGGAGTTTGGCATGGACAACTTaGAGCGTGGTCAGAAAATTGCCCAGGAAGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LFLFLWSLAWTT*SVVRKLPRKRM Trigger: CATCCTCTTCCTGGGCAATTTTCTGACCACGCTCAAAGTTGTCCATGCCAAACTCCACAAGAACAGAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067505.15 ENSMUST00000111619.10 |
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