Pregenerated sensors for TMEM120A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039886Ensembl transcript IDs: ENSMUST00000043378.9, ENSMUST00000153399.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGCACCTGCCACTCCTTaGACTCCGGGTCCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLAPATP*TPGPGP Trigger: TGGCCCGGGACCCGGAGTGCAAGGAGTGGCAGGTGC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGCAGATCCTCCCAGTTaGGCAGGCAGTCGCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLADPPS*AGSRPA Trigger: CGCTGGGCGACTGCCTGCGCAACTGGGAGGATCTGC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAGGGGAAGCCGCACATaGGCACCTGCCACTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLRGSRT*APATPC Trigger: GCAAGGAGTGGCAGGTGCTCATGTGCGGCTTCCCCT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCCGCACATGAGCACCTaGCACTCCTTGCACTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLPHMST*HSLHSG Trigger: CCCGGAGTGCAAGGAGTGGCAGGTGCTCATGTGCGG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCACCAAGGCCAGCTCCTaGAGCCGCTTCTTCTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLTKASS*SRFFCR Trigger: ACGGCAGAAGAAGCGGCTCCAGGAGCTGGCCTTGGT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCCTGTGCAGCCTCCATaGACTCGGATGGGAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLPVQPP*TRMGER Trigger: CCTCTCTCCCATCCGAGTCCATGGAGGCTGCACAGG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCTGGCCAGGTCAGCATaGCTCCTGACAGGAATGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLLARSA*LLTGMW Trigger: CCACATTCCTGTCAGGAGTCATGCTGACCTGGCCAG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCCTTGGAAGTCCTGCTaGAGATCCTCCCAGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLPWKSC*RSSQLR Trigger: GCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTCAGCTCCTCTAGCTTaGGGCGATACAGGCGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLSAPLA*GDTGDV Trigger: CACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCCACTCGCAGGGTGGTaGAGAAATTGCCGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLPLAGW*RNCRGR Trigger: TCTTCCTCGGCAATTTCTTCACCACCCTGCGAGTGG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGTTTTCCAGCTCCTGTaGAGCCTCCATGGACTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLVFQLL*SLHGLG Trigger: TCCGAGTCCATGGAGGCTGCACAGGAGCTGGAAAAC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCAGGAAGTTGAAGGCTaGGTCCGTCACCCTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLQEVEG*VRHPGV Trigger: AACTCCAGGGTGACGGACGCAGCCTTCAACTTCCTG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCTCCACATCCAAGACTaGAAGCCCTCTACGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLLHIQD*KPSTVR Trigger: TCTCACCGTAGAGGGCTTTCAGTCTTGGATGTGGAG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCCCGGATGGTCAGCGTaGAATAATACCAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLPGWSA*NNTRPA Trigger: TGCTGGTCTGGTATTATTGCACGCTGACCATCCGGG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTCAGAAGTGTCACGTTaGCATTCCCCAGAACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLSEVSR*HSPEPD Trigger: GTCTGGTTCTGGGGAATGTCAACGTGACACTTCTGA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCATACCTTGGAAGTCCTaGTGCAGATCCTCCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLIPWKS*CRSSQL Trigger: CAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTAT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTGGAGCCGCTTCTTCTaGCGTGTGATGGAGTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLWSRFF*RVMEFV Trigger: TACAAACTCCATCACACGGCAGAAGAAGCGGCTCCA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAGGCGATGTGTTTCCTaGATACCTTGGAAGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLRRCVS*IPWKSC Trigger: GCAGGACTTCCAAGGTATCCAGGAAACACATCGCCT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTGGTTCCGGAACTTCTaGTACATGAGTCCATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLWFRNF*YMSPSG Trigger: GCCAGATGGACTCATGTACCAGAAGTTCCGGAACCA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCACAATGTCAGCGCATTaGAGAGTTGCCAGAAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLTMSAH*RVARSV Trigger: GACACTTCTGGCAACTCTTCAATGCGCTGACATTGT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTTTGTACAGTTGGCCTaGAGTTTGGTCAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLFVQLA*SLVSSS Trigger: AGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTGGAGTTTGTACAGTTaGCCTGGAGTTTGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLWSLYS*PGVWSA Trigger: AGCTGACCAAACTCCAGGCCAACTGTACAAACTCCA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTCGAAGAAGAGGCCTTaGCGCTCTTTCATCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLSKKRP*RSFIWF Trigger: AAACCAGATGAAAGAGCGCCAAGGCCTCTTCTTCGA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAGCGCATTGAAGAGTTaGCAGAAGTGTCCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLSALKS*QKCPKK Trigger: CTTCTTTGGACACTTCTGGCAACTCTTCAATGCGCT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCAAAGCTCTGGTACATaGAGAAAGACAGGAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLQSSGT*RKTGTG Trigger: ACCAGTTCCTGTCTTTCTCCATGTACCAGAGCTTTG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAATTGCACAAAGCTCTaGTACATGGAGAAAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LRPRARILQAGLQAQAFLNCTKL*YMEKDR Trigger: CCTGTCTTTCTCCATGTACCAGAGCTTTGTGCAATT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAGCACCTGCCACTCCTaGCACTCCGGGTCCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLSTCHS*HSGSRA Trigger: GGCCCGGGACCCGGAGTGCAAGGAGTGGCAGGTGCT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTGCAGATCCTCCCAGTaGCGCAGGCAGTCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLCRSSQ*RRQSPS Trigger: GCTGGGCGACTGCCTGCGCAACTGGGAGGATCTGCA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS GCA 90 bp | AGGCGATACAGGCGATGTGTTTCCTGGATACCTTGGAAGTCCTGCTaGAGATCCTCCCAGTTGCGCAGGCAGTCGCCCAGCGGGTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RRYRRCVSWIPWKSC*RSSQLRRQSPSGSG Trigger: CCCGGACCCGCTGGGCGACTGCCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGTCAGCTCCTCTAGCTaGAGGCGATACAGGCGATGT | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLVSSSS*RRYRRC Trigger: ACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGAC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS GCA 90 bp | TTGAGGCGATACAGGCGATGTGTTTCCTGGATACCTTGGAAGTCCTaGTGCAGATCCTCCCAGTTGCGCAGGCAGTCGCCCAGCGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LRRYRRCVSWIPWKS*CRSSQLRRQSPSGS Trigger: GGACCCGCTGGGCGACTGCCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGTCGAAGAAGAGGCCTaGGCGCTCTTTCATCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLVEEEA*ALFHLV Trigger: AACCAGATGAAAGAGCGCCAAGGCCTCTTCTTCGAC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGCGAACTTAGCCTGCTaGCTCAGAAGTGTCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLANLAC*LRSVTL Trigger: CAACGTGACACTTCTGAGCAAGCAGGCTAAGTTCGC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCATCCTGGAACCATTGTaGATGAGGATGCTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLILEPL*MRMLSR Trigger: CCGGGAGAGCATCCTCATCAACAATGGTTCCAGGAT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTGTTTCCTGGATACCTaGGAAGTCCTGCTGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLCFLDT*EVLLQI Trigger: GATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCCTCAGAAGTGTCACGTaGACATTCCCCAGAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLLRSVT*TFPRTR Trigger: TCTGGTTCTGGGGAATGTCAACGTGACACTTCTGAG...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 90 bp | TCCTCTAGCTTGAGGCGATACAGGCGATGTGTTTCCTGGATACCTTaGAAGTCCTGCTGCAGATCCTCCCAGTTGCGCAGGCAGTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: SSSLRRYRRCVSWIP*KSCCRSSQLRRQSP Trigger: GGGCGACTGCCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCTTGATCCTGGAACCATaGTTGATGAGGATGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLLILEP*LMRMLS Trigger: GGAGAGCATCCTCATCAACAATGGTTCCAGGATCAA...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCAAAACCCACCAGCCTTaGATCCTGGAACCATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLKTHQP*ILEPLL Trigger: CAACAATGGTTCCAGGATCAAAGGCTGGTGGGTTTT...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGCCTAGAGCCCGAATCCTGCAAGCTGGGCTCCAGGCCCAGGCCTTCCTCGTAATACTGCAGGAATaGCACAAAGCTCTGGTACAT | + |
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Preference number: 5 (lower is better) Translates to: LRPRARILQAGLQAQAFLVILQE*HKALVH Trigger: ATGTACCAGAGCTTTGTGCAATTCCTGCAGTATTAC...GAGGAAGGCCTGGGCCTGGAGCCCAGCTTGCAGGATTCGGGCTCTAGGCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 90 bp | TGGAGCCGCTTCTTCTGCCGTGTGATGGAGTTTGTACAGTTGGCCTaGAGTTTGGTCAGCTCCTCTAGCTTGAGGCGATACAGGCGATGT | + |
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Preference number: 5 (lower is better) Translates to: WSRFFCRVMEFVQLA*SLVSSSSLRRYRRC Trigger: ACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAAGCGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 90 bp | AAGCTCTGGTACATGGAGAAAGACAGGAACTGGTTCCGGAACTTCTaGTACATGAGTCCATCTGGCCAGGTCAGCATGACTCCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: KLWYMEKDRNWFRNF*YMSPSGQVSMTPDR Trigger: CCTGTCAGGAGTCATGCTGACCTGGCCAGATGGACTCATGTACCAGAAGTTCCGGAACCAGTTCCTGTCTTTCTCCATGTACCAGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS TCA 90 bp | TGGAGTTTGTACAGTTGGCCTGGAGTTTGGTCAGCTCCTCTAGCTTaGGGCGATACAGGCGATGTGTTTCCTGGATACCTTGGAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: WSLYSWPGVWSAPLA*GDTGDVFPGYLGSP Trigger: AGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 72 bp | TGGATACCTTGGAAGTCCTGCTGCAGATCCTCCCAGTaGCGCAGGCAGTCGCCCAGCGGGTCCGGGGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: WIPWKSCCRSSQ*RRQSPSGSGGG Trigger: CCCGCCCCCGGACCCGCTGGGCGACTGCCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043378.9 ENSMUST00000153399.2 |
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| CDS GCA 72 bp | TACAGGCGATGTGTTTCCTGGATACCTTGGAAGTCCTaGTGCAGATCCTCCCAGTTGCGCAGGCAGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: YRRCVSWIPWKS*CRSSQLRRQSP Trigger: GGGCGACTGCCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS TCA 72 bp | CCAAGGCCAGCTCCTGGAGCCGCTTCTTCTGCCGTGTaGTGGAGTTTGTACAGTTGGCCTGGAGTTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRPAPGAASSAV*WSLYSWPGVWS Trigger: TGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAAGCGGCTCCAGGAGCTGGCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 90 bp | AGCTCCTGGAGCCGCTTCTTCTGCCGTGTGATGGAGTTTGTACAGTaGGCCTGGAGTTTGGTCAGCTCCTCTAGCTTGAGGCGATACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSWSRFFCRVMEFVQ*AWSLVSSSSLRRYR Trigger: CCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAAGCGGCTCCAGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS TCA 72 bp | TCCTTCTTGTTCCCGTGCTGCTGGCTGTGGAACTTCTaGTGCACCACTCGCAGGGTGGTGAAGAAATTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SFLFPCCWLWNF*CTTRRVVKKLP Trigger: CGGCAATTTCTTCACCACCCTGCGAGTGGTGCATCAGAAGTTCCACAGCCAGCAGCACGGGAACAAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 72 bp | TTGAGGCGATACAGGCGATGTGTTTCCTGGATACCTTaGAAGTCCTGCTGCAGATCCTCCCAGTTGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRRYRRCVSWIP*KSCCRSSQLRR Trigger: CCTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 72 bp | CTTGAGGCGATACAGGCGATGTGTTTCCTGGATACCTaGGAAGTCCTGCTGCAGATCCTCCCAGTTGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LEAIQAMCFLDT*EVLLQILPVAQ Trigger: CTGCGCAACTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 72 bp | TCCTCTAGCTTGAGGCGATACAGGCGATGTGTTTCCTaGATACCTTGGAAGTCCTGCTGCAGATCCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSLRRYRRCVS*IPWKSCCRSSQ Trigger: CTGGGAGGATCTGCAGCAGGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 72 bp | AGCCGCTTCTTCTGCCGTGTGATGGAGTTTGTACAGTaGGCCTGGAGTTTGGTCAGCTCCTCTAGCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRFFCRVMEFVQ*AWSLVSSSSLR Trigger: CCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAAGCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 90 bp | CGCTTCTTCTGCCGTGTGATGGAGTTTGTACAGTTGGCCTGGAGTTaGGTCAGCTCCTCTAGCTTGAGGCGATACAGGCGATGTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RFFCRVMEFVQLAWS*VSSSSLRRYRRCVS Trigger: GGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 90 bp | CTCCGGGTCCCGGGCCAAGTTAAACAATGTCAGCGCATTGAAGAGTaGCCAGAAGTGTCCAAAGAAGAGGAACGGAAGCAGGAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LRVPGQVKQCQRIEE*PEVSKEEERKQEGE Trigger: CTCACCTTCCTGCTTCCGTTCCTCTTCTTTGGACACTTCTGGCAACTCTTCAATGCGCTGACATTGTTTAACTTGGCCCGGGACCCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 72 bp | GTACAGTTGGCCTGGAGTTTGGTCAGCTCCTCTAGCTaGAGGCGATACAGGCGATGTGTTTCCTGGATACCT | + |
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Preference number: 6 (lower is better) Translates to: VQLAWSLVSSSS*RRYRRCVSWIP Trigger: AGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CAA 90 bp | ATGGAGTTTGTACAGTTGGCCTGGAGTTTGGTCAGCTCCTCTAGCTaGAGGCGATACAGGCGATGTGTTTCCTGGATACCTTGGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: MEFVQLAWSLVSSSS*RRYRRCVSWIPWKS Trigger: GGACTTCCAAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS TCA 72 bp | TACAGTTGGCCTGGAGTTTGGTCAGCTCCTCTAGCTTaGGGCGATACAGGCGATGTGTTTCCTGGATACCTT | + |
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Preference number: 6 (lower is better) Translates to: YSWPGVWSAPLA*GDTGDVFPGYL Trigger: AAGGTATCCAGGAAACACATCGCCTGTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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| CDS CCA 72 bp | TTCTTCTGCCGTGTGATGGAGTTTGTACAGTTGGCCTaGAGTTTGGTCAGCTCCTCTAGCTTGAGGCGATAC | + |
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Preference number: 6 (lower is better) Translates to: FFCRVMEFVQLA*SLVSSSSLRRY Trigger: GTATCGCCTCAAGCTAGAGGAGCTGACCAAACTCCAGGCCAACTGTACAAACTCCATCACACGGCAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043378.9 |
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