Pregenerated sensors for TMEM119 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054675Ensembl transcript IDs: ENSMUST00000067853.6
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCAAGAGTCATTAAGGGCGCTGGAACTTGGGGAGATGTTTCCTaGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGGGGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: VARVIKGAGTWGDVS*GAPEGIGSASSGSA Trigger: GGCTGACCCCGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGTTCCAGCGCCCTTAATGACTCTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 90 bp | CGTGGACTGACAGAGAAGAGTTCTGCTCACTCCCCTCGCCCCACATaGGGAAGCCAGGGTTGCTTGACACTTGAGAGAGCCAGACGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RGLTEKSSAHSPRPT*GSQGCLTLERARRP Trigger: AGGGCGTCTGGCTCTCTCAAGTGTCAAGCAACCCTGGCTTCCGCATGTGGGGCGAGGGGAGTGAGCAGAACTCTTCTCTGTCAGTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 90 bp | GTCCCTGGTATTACCAGACACGGGCTGCGCCGCAGGCCCAGTCATTaGTGTCTTCCAAATCTAACAGCCCCTCTGGTCTCCACAGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: VPGITRHGLRRRPSH*CLPNLTAPLVSTAE Trigger: CTCGGCTGTGGAGACCAGAGGGGCTGTTAGATTTGGAAGACATCAATGACTGGGCCTGCGGCGCAGCCCGTGTCTGGTAATACCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CCA 90 bp | TCATATATCCACATCCGAAGAGCTGAGGACTCGGGGAGCCCTGAATaGAGGTGTGGGGAGTCCCTCAGAACAGAGCCTAAGCATTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SYIHIRRAEDSGSPE*RCGESLRTEPKHCQ Trigger: TTGACAATGCTTAGGCTCTGTTCTGAGGGACTCCCCACACCTCCATTCAGGGCTCCCCGAGTCCTCAGCTCTTCGGATGTGGATATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CAA 90 bp | TGGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGGGGTCAGCCTaGGCACCAGCAATGGCCAAGCCACGTGGTATCAAGGAGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: WGAPEGIGSASSGSA*APAMAKPRGIKEQL Trigger: TAACTGCTCCTTGATACCACGTGGCTTGGCCATTGCTGGTGCCAAGGCTGACCCCGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGCCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTTCTGCTCTGAGGACTCCTTGGCACCAGCAATaGCCAAGCCACGTGGTATCA | + |
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Preference number: 2 (lower is better) Translates to: SLPRHRWPLAWSPSALRTPWHQQ*PSHVVS Trigger: TGATACCACGTGGCTTGGCCATTGCTGGTGCCAAGG...AGTCCTCAGAGCAGAAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR-3UTR CCA 90 bp | CTTAGAGTAGCCATGTCAGCTTGTGGAGGGGCACAGCGGCTCCTAAAGCCACTTAGGTGGCCTCTGGCCTaGTCCCCTTCTGCTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LRVAMSACGGAQRLLKPLRWPLA*SPSALR Trigger: CCTCAGAGCAGAAGGGGACCAGGCCAGAGGCCACCT...AAGTGGCTTTAGGAGCCGCTGTGCCCCTCCACAAGCTGACATGGCTACTCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCGGCTCCTAAAGCCACTTGATTTTGAGTTTGTGTTTCCACGGGGTGTCAGTGGTGCGTTAGGGTaGAGCCCCCAGGGTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AQRLLKPLDFEFVFPRGVSGALG*SPQGGK Trigger: CTTGCCACCCTGGGGGCTTCACCCTAACGCACCACT...GACACCCCGTGGAAACACAAACTCAAAATCAAGTGGCTTTAGGAGCCGCTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAGTAGCCATGTCAGCTTGTGGAGGGGCACAGCGGCTCCTAAAGCCACTTAGATGTTTCCTGGGGTaGACCAGAGGGCATCGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LRVAMSACGGAQRLLKPLRCFLG*TRGHRL Trigger: GAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCT...AAGTGGCTTTAGGAGCCGCTGTGCCCCTCCACAAGCTGACATGGCTACTCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | GTGGCCTCTGGCCTGGTCCCCTTCTGCTCTGAGGACTaGCTCATGCAGCCCCAACTGGCATGTGTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VASGLVPFCSED*LMQPQLACVWP Trigger: AGGCCAGACACATGCCAGTTGGGGCTGCATGAGGCAGTCCTCAGAGCAGAAGGGGACCAGGCCAGAGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | AACAGCCCCTCTGGTCTCCACAGCCGAGATGCAGTTTaGCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: NSPSGLHSRDAV*PVTGGLWPGPL Trigger: AAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACTGCATCTCGGCTGTGGAGACCAGAGGGGCTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 72 bp | ACTCCCCTCGCCCCACATGCGGAAGCCAGGGTTGCTTaGCACTTGAGAGAGCCAGACGCCCTGCATCCCATA | + |
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Preference number: 3 (lower is better) Translates to: TPLAPHAEARVA*HLREPDALHPI Trigger: TATGGGATGCAGGGCGTCTGGCTCTCTCAAGTGTCAAGCAACCCTGGCTTCCGCATGTGGGGCGAGGGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | GCGACATTGCAGGTGATGGGAAGATGCAAACGCCTCTaGCGTCCCTGGTATTACCAGACACGGGCTGCGCCG | + |
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Preference number: 3 (lower is better) Translates to: ATLQVMGRCKRL*RPWYYQTRAAP Trigger: CGGCGCAGCCCGTGTCTGGTAATACCAGGGACGGCAGAGGCGTTTGCATCTTCCCATCACCTGCAATGTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | TGGCATGTGTCTGGCCTTCCCCTTCCAGAGAAGTGGTaGGTTAGGGTGAAGCCCCCAGGGTGGCAAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: WHVSGLPLPEKW*VRVKPPGWQES Trigger: TGACTCTTGCCACCCTGGGGGCTTCACCCTAACGCACCACTTCTCTGGAAGGGGAAGGCCAGACACATGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CCA 72 bp | GTCATTAAGGGCGCTGGAACTTGGGGAGATGTTTCCTaGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCG | + |
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Preference number: 3 (lower is better) Translates to: VIKGAGTWGDVS*GAPEGIGSASS Trigger: CGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGTTCCAGCGCCCTTAATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CCA 72 bp | CCCAGGGTGGCAAGAGTCATTAAGGGCGCTGGAACTTaGGGAGATGTTTCCTGGGGTGCACCAGAGGGCATC | + |
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Preference number: 3 (lower is better) Translates to: PRVARVIKGAGT*GDVSWGAPEGI Trigger: GATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGTTCCAGCGCCCTTAATGACTCTTGCCACCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 72 bp | TCGCCCCACATGCGGAAGCCAGGGTTGCTTGACACTTaGGAGAGCCAGACGCCCTGCATCCCATATTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: SPHMRKPGLLDT*ESQTPCIPYSN Trigger: GTTGGAATATGGGATGCAGGGCGTCTGGCTCTCTCAAGTGTCAAGCAACCCTGGCTTCCGCATGTGGGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | ACAGAGAAGAGTTCTGCTCACTCCCCTCGCCCCACATaGGGAAGCCAGGGTTGCTTGACACTTGAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: TEKSSAHSPRPT*GSQGCLTLERA Trigger: GGCTCTCTCAAGTGTCAAGCAACCCTGGCTTCCGCATGTGGGGCGAGGGGAGTGAGCAGAACTCTTCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 72 bp | ATTACCAGACACGGGCTGCGCCGCAGGCCCAGTCATTaGTGTCTTCCAAATCTAACAGCCCCTCTGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: ITRHGLRRRPSH*CLPNLTAPLVS Trigger: GGAGACCAGAGGGGCTGTTAGATTTGGAAGACATCAATGACTGGGCCTGCGGCGCAGCCCGTGTCTGGTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 72 bp | AGTCCCTCAGAACAGAGCCTAAGCATTGTCAAGGACTaGGGAGTTGTGTGGGCTCAGGCTGCCAGACCACTG | + |
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Preference number: 3 (lower is better) Translates to: SPSEQSLSIVKD*GVVWAQAARPL Trigger: CAGTGGTCTGGCAGCCTGAGCCCACACAACTCCTCAGTCCTTGACAATGCTTAGGCTCTGTTCTGAGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR GCA 72 bp | GGCAGAGTGACAGCGACATTGCAGGTGATGGGAAGATaGAAACGCCTCTGCCGTCCCTGGTATTACCAGACA | + |
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Preference number: 3 (lower is better) Translates to: GRVTATLQVMGR*KRLCRPWYYQT Trigger: TGTCTGGTAATACCAGGGACGGCAGAGGCGTTTGCATCTTCCCATCACCTGCAATGTCGCTGTCACTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR-3UTR CAA 90 bp | CTTAGAGTAGCCATGTCAGCTTGTGGAGGGGCACAGCGGCTCCTAAAGCCACTTCCGCAGGCCCAGTCATaGATGTCTTCCAAATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LRVAMSACGGAQRLLKPLPQAQS*MSSKSN Trigger: GTTAGATTTGGAAGACATCAATGACTGGGCCTGCGG...AAGTGGCTTTAGGAGCCGCTGTGCCCCTCCACAAGCTGACATGGCTACTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR TCA 72 bp | GTAGCTGTGAGGCATCCTGGTAATAAGAAAGCAGCTTaGGGAAAGCGTAGCAAAGCCAGCCCAGCAGGAACC | + |
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Preference number: 3 (lower is better) Translates to: VAVRHPGNKKAA*GKRSKASPAGT Trigger: GGTTCCTGCTGGGCTGGCTTTGCTACGCTTTCCTCAAGCTGCTTTCTTATTACCAGGATGCCTCACAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | GAGGACTGCCTCATGCAGCCCCAACTGGCATGTGTCTGGCCTTCCCCTTCCAGACAGGAGGTTGGTGGGTaGCACGGGGCCGTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EDCLMQPQLACVWPSPSRQEVGG*HGAVQS Trigger: GCTCTGGACGGCCCCGTGCCACCCACCAACCTCCTG...TCTGGAAGGGGAAGGCCAGACACATGCCAGTTGGGGCTGCATGAGGCAGTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | AGTTTGCCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTTCTGCTCTGAGGACTGCTCGGGGAAGAGGCTaGAGAACCCTCAGCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLPRHRWPLAWSPSALRTARGRG*RTLSFP Trigger: GGGGAAGCTGAGGGTTCTTCAGCCTCTTCCCCGAGC...AGTCCTCAGAGCAGAAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGAGGACTCGGGGAGCCCTGAATGGAGGTGTGGGGAGTCCCTCAGAATCTCCGGTGTGGGACTaGAGGCTGGAGTCCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EELRTRGALNGGVGSPSESPVWD*RLESQA Trigger: CGCCTGGGACTCCAGCCTTCAGTCCCACACCGGAGA...TTCTGAGGGACTCCCCACACCTCCATTCAGGGCTCCCCGAGTCCTCAGCTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | AGTTTGCCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTTCTGCTCTGAGGACTAGCCCACCACCGCGATaGGCATCACGTACTGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPRHRWPLAWSPSALRTSPPPR*ASRTAG Trigger: TCCGGCAGTACGTGATGCTCATCGCGGTGGTGGGCT...AGTCCTCAGAGCAGAAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | ACTTGGGGAGATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGCCTCCTCCTGACCGCTaGGCACCTCTTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TWGDVSWGAPEGIGSASSPPPDR*APLPPP Trigger: AGGAGGAGGAAGAGGTGCTCAGCGGTCAGGAGGAGG...CGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | GATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGGGGTCAGCCGGAGACCGGAGGTTCTaGGTAGCAGCCAGAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: DVSWGAPEGIGSASSGSAGDRRF*VAARMS Trigger: TGACATTCTGGCTGCTACCCAGAACCTCCGGTCTCC...GGCTGACCCCGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | CTGCCAGTTCGGGGTCAGCCTTGGCACCAGCAATGGCCAAGCCACGTGGTATCATCCCTCCCCATTGCCTaGCAGGGCTCTAGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LPVRGQPWHQQWPSHVVSSLPIA*QGSSWR Trigger: TCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGA...TGATACCACGTGGCTTGGCCATTGCTGGTGCCAAGGCTGACCCCGAACTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | TGGAACTTGGGGAGATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGAGTGACCCCACATACTaGGGCTTCCTGGGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WNLGRCFLGCTRGHRLCQSDPTY*GFLGLL Trigger: GAGGAGGCCCAGGAAGCCCCAGTATGTGGGGTCACT...CTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CAA 72 bp | CTGCTCCAGGCTGGGCGTCAGAATCCAGACCGTCAGTaGCCCCCAGGCACCCGTTGGCTTCTAGTCTACTTC | + |
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Preference number: 4 (lower is better) Translates to: LLQAGRQNPDRQ*PPGTRWLLVYF Trigger: GAAGTAGACTAGAAGCCAACGGGTGCCTGGGGGCAACTGACGGTCTGGATTCTGACGCCCAGCCTGGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR GCA 90 bp | GAGATGCAGTTTGCCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTTCTGCTCTGGAGAAAGACCCTTCTaGTTCCCCTTGGCCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: EMQFAPSQVASGLVPFCSGERPF*FPLALT Trigger: AGTGAGGGCCAAGGGGAAGCAGAAGGGTCTTTCTCC...AGAGCAGAAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACTGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | ACTTGGGGAGATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGGCCGGAAGAAATCCATaGTCCCTTCCAGGAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TWGDVSWGAPEGIGSASSAGRNP*SLPGGW Trigger: CCAACCTCCTGGAAGGGATCATGGATTTCTTCCGGC...CGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | TGGAACTTGGGGAGATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGGCTCCCTGGGATTCCTaGGCTAAGGAGAAAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: WNLGRCFLGCTRGHRLCQAPWDS*AKEKDP Trigger: AGGGTCTTTCTCCTTAGCCCAGGAATCCCAGGGAGC...CTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATCTCCCCAAGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR GCA 90 bp | GATGTTTCCTGGGGTGCACCAGAGGGCATCGGCTCTGCCAGTTCGGGGTCAGCCATGAGCATCACGTACTaGCGGAAGAAATCCATGATC | + |
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Preference number: 4 (lower is better) Translates to: DVSWGAPEGIGSASSGSAMSITY*RKKSMI Trigger: GATCATGGATTTCTTCCGGCAGTACGTGATGCTCAT...GGCTGACCCCGAACTGGCAGAGCCGATGCCCTCTGGTGCACCCCAGGAAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR GCA 90 bp | CTTAGAGTAGCCATGTCAGCTTGTGGAGGGGCACAGCGGCTCCTAAAGCCACTTACCCTTCACAGGCTTTaGTCCCTCCCCATTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRVAMSACGGAQRLLKPLTLHRL*SLPIAW Trigger: CCAGGCAATGGGGAGGGAGCAAAGCCTGTGAAGGGT...AAGTGGCTTTAGGAGCCGCTGTGCCCCTCCACAAGCTGACATGGCTACTCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | GCACAGCGGCTCCTAAAGCCACTTGATTTTGAGTTTGTGTTTCCACGGGGTGTCCCTTCTGCTTCCCCTTaGCCCTCACTGGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AQRLLKPLDFEFVFPRGVPSASP*PSLVAG Trigger: TCCTGCCACCAGTGAGGGCCAAGGGGAAGCAGAAGG...GACACCCCGTGGAAACACAAACTCAAAATCAAGTGGCTTTAGGAGCCGCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CAA 72 bp | TATTACCAGACACGGGCTGCGCCGCAGGCCCAGTCATaGATGTCTTCCAAATCTAACAGCCCCTCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: YYQTRAAPQAQS*MSSKSNSPSGL Trigger: GAGACCAGAGGGGCTGTTAGATTTGGAAGACATCAATGACTGGGCCTGCGGCGCAGCCCGTGTCTGGTAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CAA 72 bp | TCAAGTCCACTGAACAGGGGCAGAGTGACAGCGACATaGCAGGTGATGGGAAGATGCAAACGCCTCTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SSPLNRGRVTAT*QVMGRCKRLCR Trigger: ACGGCAGAGGCGTTTGCATCTTCCCATCACCTGCAATGTCGCTGTCACTCTGCCCCTGTTCAGTGGACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR TCA 90 bp | TATTATGCTAGTGTGTCATATATCCACATCCGAAGAGCTGAGGACTCGGGGAGCATGTCAGCCTGGAGCTaGTGGGAGGTGTCCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: YYASVSYIHIRRAEDSGSMSAWS*WEVSRP Trigger: AGGCCTGGACACCTCCCATCAGCTCCAGGCTGACAT...GCTCCCCGAGTCCTCAGCTCTTCGGATGTGGATATATGACACACTAGCATAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CCA 90 bp | TATTATGCTAGTGTGTCATATATCCACATCCGAAGAGCTGAGGACTCGGGGAGCTTCAGGGAACGAGGATaGGTAGTAGGCTGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YYASVSYIHIRRAEDSGSFRERG*VVGCGL Trigger: AAGGCCACAGCCTACTACCCATCCTCGTTCCCTGAA...GCTCCCCGAGTCCTCAGCTCTTCGGATGTGGATATATGACACACTAGCATAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR GCA 90 bp | ATCAAGATTTATTATGCTAGTGTGTCATATATCCACATCCGAAGAGCTGAGGACCCTCAGCTTCCCCGCTaGCGGCTACATCCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IKIYYASVSYIHIRRAEDPQLPR*RLHPPG Trigger: TCCTGGAGGATGTAGCCGGCAGCGGGGAAGCTGAGG...GTCCTCAGCTCTTCGGATGTGGATATATGACACACTAGCATAATAAATCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| 3UTR CAA 72 bp | TGGAGAACAGTATTTTCCAGTGCGGGTGCTGTGAGATaGGACTTTGTAGCTGTGAGGCATCCTGGTAATAAG | + |
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Preference number: 4 (lower is better) Translates to: WRTVFSSAGAVR*DFVAVRHPGNK Trigger: CTTATTACCAGGATGCCTCACAGCTACAAAGTCCAATCTCACAGCACCCGCACTGGAAAATACTGTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 90 bp | TCCAGGAGGTTGGTGGGTGGCACGGGGCCGTCCAGAGCTGTGGGCTaGGGTCTCTCCGGTGTGGGACTGAAGGCTGGAGTCCCAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SRRLVGGTGPSRAVG*GLSGVGLKAGVPGG Trigger: GCCGCCTGGGACTCCAGCCTTCAGTCCCACACCGGAGAGACCCCAGCCCACAGCTCTGGACGGCCCCGTGCCACCCACCAACCTCCTGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCTCCAGGCTGGGCGTCAGAATCCAGACCGTCAGTTGCCCCCAGGCACCCCTTCTGCTTCCCCTaGGCCCTCACTGGTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: APAPGWASESRPSVAPRHPFCFP*ALTGGR Trigger: CCTGCCACCAGTGAGGGCCAAGGGGAAGCAGAAGGG...GTGCCTGGGGGCAACTGACGGTCTGGATTCTGACGCCCAGCCTGGAGCAGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS TCA 90 bp | ACTGAAGGCTGGAGTCCCAGGCGGCGGCAGGCTCGGGGAAGAGGCTaGAGAACCCTCAGCTTCCCCGCTGCCGGCTACATCCTCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TEGWSPRRRQARGRG*RTLSFPAAGYILQE Trigger: TTCCTGGAGGATGTAGCCGGCAGCGGGGAAGCTGAGGGTTCTTCAGCCTCTTCCCCGAGCCTGCCGCCGCCTGGGACTCCAGCCTTCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS GCA 90 bp | GCGGCAGGCTCGGGGAAGAGGCTGAAGAACCCTCAGCTTCCCCGCTaGCGGCTACATCCTCCAGGAAGGAGGCCGGGAGTGACACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: AAGSGKRLKNPQLPR*RLHPPGRRPGVTQS Trigger: ACTCTGTGTCACTCCCGGCCTCCTTCCTGGAGGATGTAGCCGGCAGCGGGGAAGCTGAGGGTTCTTCAGCCTCTTCCCCGAGCCTGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS TCA 90 bp | GGCCTTCTTCATGCCGGCTGTCAGGTGCCCTGTCAGGGACCTCGCTaGAGGTACGGGGTCCCCCAGCCCGGTCTCTCTGGTCCACATACT | + |
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Preference number: 5 (lower is better) Translates to: GLLHAGCQVPCQGPR*RYGVPQPGLSGPHT Trigger: AGTATGTGGACCAGAGAGACCGGGCTGGGGGACCCCGTACCTTCAGCGAGGTCCCTGACAGGGCACCTGACAGCCGGCATGAAGAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | GAGATGCAGTTTGCCCCGTCACAGGTGGCCTCTGGCCTGGTCCCCTTCTGCTCTTTTGCTCCCTCCCCATaGCCTGGCAGGGCTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: EMQFAPSQVASGLVPFCSFAPSP*PGRALA Trigger: AGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAA...AGAGCAGAAGGGGACCAGGCCAGAGGCCACCTGTGACGGGGCAAACTGCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | GGCTCTGCCAGTTCGGGGTCAGCCTTGGCACCAGCAATGGCCAAGCCACGTGGTTTTCAGGAGGACCAGTaGCTCCCTGGGATTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSASSGSALAPAMAKPRGFQEDQ*LPGIPG Trigger: CCCAGGAATCCCAGGGAGCAACTGGTCCTCCTGAAA...ACCACGTGGCTTGGCCATTGCTGGTGCCAAGGCTGACCCCGAACTGGCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 90 bp | CTTCACAGGCTTTGCTCCCTCCCCATTGCCTGGCAGGGCTCTAGCTaGAGACCGGAGGTTCTGGGTAGCAGCCAGAATGTCAGCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LHRLCSLPIAWQGSS*RPEVLGSSQNVSLE Trigger: CTCCAGGCTGACATTCTGGCTGCTACCCAGAACCTCCGGTCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAAGCCTGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | CTCAGAACAGAGCCTAAGCATTGTCAAGGACTGAGGAGTTGTGTGGGCTCAGGCATCCCTTCCAGGAGGTaGGTGGGTGGCACGGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: LRTEPKHCQGLRSCVGSGIPSRR*VGGTGP Trigger: CGGCCCCGTGCCACCCACCAACCTCCTGGAAGGGAT...GCCTGAGCCCACACAACTCCTCAGTCCTTGACAATGCTTAGGCTCTGTTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS GCA 90 bp | ATGAGGAAGGTCAGCGAGCCCACCACCGCGATGAGCATCACGTACTaGCGGAAGAAATCCATGATCCCTTCCAGGAGGTTGGTGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: MRKVSEPTTAMSITY*RKKSMIPSRRLVGG Trigger: GCCACCCACCAACCTCCTGGAAGGGATCATGGATTTCTTCCGGCAGTACGTGATGCTCATCGCGGTGGTGGGCTCGCTGACCTTCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 90 bp | AGCCCGGTCTCTCTGGTCCACATACTTCTTTTCAGGGAACGAGGATaGGTAGTAGGCTGTGGCCTTGTGCTTCTGGCGCGTGATGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPVSLVHILLFRERG*VVGCGLVLLARDEG Trigger: GCCCTCATCACGCGCCAGAAGCACAAGGCCACAGCCTACTACCCATCCTCGTTCCCTGAAAAGAAGTATGTGGACCAGAGAGACCGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | TATTATGCTAGTGTGTCATATATCCACATCCGAAGAGCTGAGGACTCGGGGAGCCACCCTTCACAGGCTTaGCTCCCTCCCCATTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: YYASVSYIHIRRAEDSGSHPSQA*LPPHCL Trigger: CAGGCAATGGGGAGGGAGCAAAGCCTGTGAAGGGTG...GCTCCCCGAGTCCTCAGCTCTTCGGATGTGGATATATGACACACTAGCATAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS-3UTR CAA 90 bp | TATTATGCTAGTGTGTCATATATCCACATCCGAAGAGCTGAGGACTCGGGGAGCCTGGGGGAGACTCTGTaGCAGGCACAGGGACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: YYASVSYIHIRRAEDSGSLGETL*QAQGLS Trigger: TGAAAGTCCCTGTGCCTGCAACAGAGTCTCCCCCAG...GCTCCCCGAGTCCTCAGCTCTTCGGATGTGGATATATGACACACTAGCATAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | TGTGGGCTGGGGTCTCTCCGGTGTGGGACTGAAGGCTaGAGTCCCAGGCGGCGGCAGGCTCGGGGAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CGLGSLRCGTEG*SPRRRQARGRG Trigger: GCCTCTTCCCCGAGCCTGCCGCCGCCTGGGACTCCAGCCTTCAGTCCCACACCGGAGAGACCCCAGCCCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS TCA 72 bp | CATGCCGGCTGTCAGGTGCCCTGTCAGGGACCTCGCTaGAGGTACGGGGTCCCCCAGCCCGGTCTCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAGCQVPCQGPR*RYGVPQPGLSG Trigger: ACCAGAGAGACCGGGCTGGGGGACCCCGTACCTTCAGCGAGGTCCCTGACAGGGCACCTGACAGCCGGCATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS GCA 72 bp | TCGGGGAAGAGGCTGAAGAACCCTCAGCTTCCCCGCTaGCGGCTACATCCTCCAGGAAGGAGGCCGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SGKRLKNPQLPR*RLHPPGRRPGV Trigger: CACTCCCGGCCTCCTTCCTGGAGGATGTAGCCGGCAGCGGGGAAGCTGAGGGTTCTTCAGCCTCTTCCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS TCA 72 bp | GCCCTCACTGGTGGCAGGAACCCCTTCAGCCTCTGCTaGGACCGACTCCTCTGGGACCCCCAGCTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ALTGGRNPFSLC*DRLLWDPQLLF Trigger: GAAGAGAAGCTGGGGGTCCCAGAGGAGTCGGTCTCAGCAGAGGCTGAAGGGGTTCCTGCCACCAGTGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | CCCACCCTTCACAGGCTTTGCTCCCTCCCCATTGCCTaGCAGGGCTCTAGCTGGAGACCGGAGGTTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PTLHRLCSLPIA*QGSSWRPEVLG Trigger: ACCCAGAACCTCCGGTCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAAGCCTGTGAAGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | TGGGACCCCCAGCTTCTCTTCAGTGACCCCACATACTaGGGCTTCCTGGGCCTCCTCCTGACCGCTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: WDPQLLFSDPTY*GFLGLLLTAEH Trigger: GTGCTCAGCGGTCAGGAGGAGGCCCAGGAAGCCCCAGTATGTGGGGTCACTGAAGAGAAGCTGGGGGTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CAA 72 bp | TCCGACCCACCCTTCACAGGCTTTGCTCCCTCCCCATaGCCTGGCAGGGCTCTAGCTGGAGACCGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SDPPFTGFAPSP*PGRALAGDRRF Trigger: GAACCTCCGGTCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAAGCCTGTGAAGGGTGGGTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CAA 90 bp | TCCTCCTCCTCCGACCCACCCTTCACAGGCTTTGCTCCCTCCCCATaGCCTGGCAGGGCTCTAGCTGGAGACCGGAGGTTCTGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSDPPFTGFAPSP*PGRALAGDRRFWVA Trigger: TGCTACCCAGAACCTCCGGTCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAAGCCTGTGAAGGGTGGGTCGGAGGAGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CAA 90 bp | AGCATCACGTACTGCCGGAAGAAATCCATGATCCCTTCCAGGAGGTaGGTGGGTGGCACGGGGCCGTCCAGAGCTGTGGGCTGGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SITYCRKKSMIPSRR*VGGTGPSRAVGWGL Trigger: GAGACCCCAGCCCACAGCTCTGGACGGCCCCGTGCCACCCACCAACCTCCTGGAAGGGATCATGGATTTCTTCCGGCAGTACGTGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | GAAGAAATCCATGATCCCTTCCAGGAGGTTGGTGGGTaGCACGGGGCCGTCCAGAGCTGTGGGCTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EEIHDPFQEVGG*HGAVQSCGLGS Trigger: AGACCCCAGCCCACAGCTCTGGACGGCCCCGTGCCACCCACCAACCTCCTGGAAGGGATCATGGATTTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CAA 72 bp | TACTGCCGGAAGAAATCCATGATCCCTTCCAGGAGGTaGGTGGGTGGCACGGGGCCGTCCAGAGCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: YCRKKSMIPSRR*VGGTGPSRAVG Trigger: GCCCACAGCTCTGGACGGCCCCGTGCCACCCACCAACCTCCTGGAAGGGATCATGGATTTCTTCCGGCAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | CTTTGCTCCCTCCCCATTGCCTGGCAGGGCTCTAGCTaGAGACCGGAGGTTCTGGGTAGCAGCCAGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: LCSLPIAWQGSS*RPEVLGSSQNV Trigger: GACATTCTGGCTGCTACCCAGAACCTCCGGTCTCCAGCTAGAGCCCTGCCAGGCAATGGGGAGGGAGCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS CCA 72 bp | AGGAGAAAGACCCTTCTGCTTCCCCTTGGCCCTCACTaGTGGCAGGAACCCCTTCAGCCTCTGCTGAGACCG | + |
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Preference number: 6 (lower is better) Translates to: RRKTLLLPLGPH*WQEPLQPLLRP Trigger: CGGTCTCAGCAGAGGCTGAAGGGGTTCCTGCCACCAGTGAGGGCCAAGGGGAAGCAGAAGGGTCTTTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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| CDS GCA 72 bp | GTCAGCGAGCCCACCACCGCGATGAGCATCACGTACTaGCGGAAGAAATCCATGATCCCTTCCAGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VSEPTTAMSITY*RKKSMIPSRRL Trigger: CAACCTCCTGGAAGGGATCATGGATTTCTTCCGGCAGTACGTGATGCTCATCGCGGTGGTGGGCTCGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067853.6 |
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