Pregenerated sensors for TMEM117 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063296Ensembl transcript IDs: ENSMUST00000080141.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTaGGAGCTCACCCAACTGTTTCTCTTAACCTTTGTTCCCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SIPWWSRTLWKCQYI*ELTQLFLLTFVPKG Trigger: TCCTTTGGGAACAAAGGTTAAGAGAAACAGTTGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCACCCAGAAAGTCACATTTCGTaGGCAGTGACCCATGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLVVQDIVEMPIHLRAHPESHIS*AVTHGA Trigger: TGCACCATGGGTCACTGCTCACGAAATGTGACTTTC...TGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 90 bp | AGACAGTGGGCTGTGCCGGCTTCACATGATTACGACTTCAATTCCTaGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RQWAVPASHDYDFNS*VVQDIVEMPIHLRA Trigger: AGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAATCATGTGAAGCCGGCACAGCCCACTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CCA 90 bp | CGCATCAAAGTCACTTCACTGCTAAACAGTGAACCAAGAGAACTTTCTACAACCCTCAAGGCACCGCTATaGTTGGACATCAGATACATG | + |
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Preference number: 2 (lower is better) Translates to: RIKVTSLLNSEPRELSTTLKAPL*LDIRYM Trigger: CATGTATCTGATGTCCAACCATAGCGGTGCCTTGAG...GGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 90 bp | TTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTaGAGAGCTCACCCAACTGTTTCTCTTAACCTTTGTTCCCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FNSLVVQDIVEMPIH*RAHPTVSLNLCSQR Trigger: CCTTTGGGAACAAAGGTTAAGAGAAACAGTTGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CCA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCAGGCACCGCTATGGTTaGACATCAGATACATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFRHRYG*TSDTWV Trigger: TACCCATGTATCTGATGTCCAACCATAGCGGTGCCT...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR TCA 90 bp | ACCCATGGTGCATTGCAGCCCTCCGCTGACTGGATTTTACATTTATATTTATATCTAGAAAAAGCATGTTaGGCACCGTTGTGGCATAGT | + |
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Preference number: 2 (lower is better) Translates to: THGALQPSADWILHLYLYLEKAC*APLWHS Trigger: ACTATGCCACAACGGTGCTCAACATGCTTTTTCTAG...ATATAAATATAAATGTAAAATCCAGTCAGCGGAGGGCTGCAATGCACCATGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR GCA 90 bp | AAAAACAGTTTAATGTCTCAAGGCACCGCTATGGTTGGACATCAGATACATGGGAGTTACACTCAAGGTTaGTCTTTGTGCTATCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: KNSLMSQGTAMVGHQIHGSYTQG*SLCYLR Trigger: ACGGAGATAGCACAAAGAGCAACCTTGAGTGTAACT...CCCATGTATCTGATGTCCAACCATAGCGGTGCCTTGAGACATTAAACTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR GCA 90 bp | GTCAACATGGCCGTAAGGTTTTCTATTTTCACGGTCCAGAACCGTATTTACAGCTCAGTAAATAGCTTGTaGGGTTGGGAAAAGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: VNMAVRFSIFTVQNRIYSSVNSL*GWEKQS Trigger: AGATTGCTTTTCCCAACCGCACAAGCTATTTACTGA...GCTGTAAATACGGTTCTGGACCGTGAAAATAGAAAACCTTACGGCCATGTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR GCA 90 bp | TACATGGGTAATCGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTTGTGCCAAGGTTGCTCTTTGTaGTATCTCCGTCTAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: YMGNRLIYLAVKSVNSLCQGCSL*YLRLRD Trigger: ATCTCTTAGACGGAGATAGCACAAAGAGCAACCTTG...GCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCGATTACCCATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR GCA 90 bp | CGCATCAAAGTCACTTCACTGCTAAACAGTGAACCAAGAGAACTTTCTACAACCCTCTGTCTTGTTTTCTaGTCAGACATCAAGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: RIKVTSLLNSEPRELSTTLCLVF*SDIKCK Trigger: CTTACACTTGATGTCTGAGCAGAAAACAAGACAGAG...GGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CCA 90 bp | TTACGACTTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTAATAGCTTGTGCGGTTaGGAAAAGCAATCTCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLQFLGGPGHCGNANTFNSLCG*EKQSLE Trigger: CTCTAGAGATTGCTTTTCCCAACCGCACAAGCTATT...AAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CCA 90 bp | TTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCCATGTGAAATAGACTaGAGAACCATTCTACACTTC | + |
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Preference number: 2 (lower is better) Translates to: FNSLVVQDIVEMPIHLRAPCEID*RTILHF Trigger: GAAGTGTAGAATGGTTCTCCAGTCTATTTCACATGG...AGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CAA 90 bp | CGCATCAAAGTCACTTCACTGCTAAACAGTGAACCAAGAGAACTTTCTACAACCAAGGCACCGCTATGGTaGGACATCAGATACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: RIKVTSLLNSEPRELSTTKAPLW*DIRYMG Trigger: ACCCATGTATCTGATGTCCAACCATAGCGGTGCCTT...GGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CCA 72 bp | CTGTGCCGGCTTCACATGATTACGACTTCAATTCCTTaGTGGTCCAGGACATTGTGGAAATGCCAATACATT | + |
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Preference number: 3 (lower is better) Translates to: LCRLHMITTSIP*WSRTLWKCQYI Trigger: AATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAATCATGTGAAGCCGGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR TCA 72 bp | GCAGTCCCGCATCAAAGTCACTTCACTGCTAAACAGTaGACCAAGAGAACTTTCTACAACCACAAATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: AVPHQSHFTAKQ*TKRTFYNHKSA Trigger: AGCTGATTTGTGGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCGGGACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CAA 90 bp | CGCATCAAAGTCACTTCACTGCTAAACAGTGAACCAAGAGAACTTTCTACAACCAAGTTACACTCAAGGTaGCTCTTTGTGCTATCTCCG | + |
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Preference number: 3 (lower is better) Translates to: RIKVTSLLNSEPRELSTTKLHSR*LFVLSP Trigger: CGGAGATAGCACAAAGAGCAACCTTGAGTGTAACTT...GGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR TCA 72 bp | TGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTaGGAGCTCACCCAACTGTTTCTCTTAACCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: WWSRTLWKCQYI*ELTQLFLLTFV Trigger: AACAAAGGTTAAGAGAAACAGTTGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR-3UTR CAA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCACTCAAGGTTGCTCTTaGTGCTATCTCCGTCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFTQGCS*CYLRLR Trigger: TCTTAGACGGAGATAGCACAAAGAGCAACCTTGAGT...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | TGGAGAAAGTCACATTTCGTGAGCAGTGACCCATGGTGCATTGCAGCCCTCCGCTGGCCAAATAAACGCTaGTGGAAGAGGAACTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WRKSHFVSSDPWCIAALRWPNKR*WKRNLP Trigger: TGGCAAGTTCCTCTTCCATCAGCGTTTATTTGGCCA...GCGGAGGGCTGCAATGCACCATGGGTCACTGCTCACGAAATGTGACTTTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR GCA 90 bp | TGGAGAAAGTCACATTTCGTGAGCAGTGACCCATGGTGCATTGCAGCCCTCCGCGGGAATTCCCAGTCCTaGATCACAATAAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: WRKSHFVSSDPWCIAALRGNSQS*ITIRRS Trigger: TGACCTCCTTATTGTGATGCAGGACTGGGAATTCCC...GCGGAGGGCTGCAATGCACCATGGGTCACTGCTCACGAAATGTGACTTTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | TCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCACCCACATCAACGTCGCCCATaGAGTGTGGGAATTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLVVQDIVEMPIHLRAHPHQRRP*SVGIPS Trigger: ACTGGGAATTCCCACACTTCATGGGCGACGTTGATG...TGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | GTCAACATGGCCGTAAGGTTTTCTATTTTCACGGTCCAGAACCGTATTTACAGCATCTTGAACTGCATGTaGGGCGTGTGCAACCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VNMAVRFSIFTVQNRIYSILNCM*GVCNPG Trigger: CCCCGGGTTGCACACGCCTCACATGCAGTTCAAGAT...GCTGTAAATACGGTTCTGGACCGTGAAAATAGAAAACCTTACGGCCATGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCGCTTCTGTTTGGCTGTaGGAGACTGGGTCCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFASVWL*ETGSSA Trigger: CGCTGAGGACCCAGTCTCTCACAGCCAAACAGAAGC...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | TCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCACCCATGCGGTATTCCTCCTTaGAGATCTTCTGGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SLVVQDIVEMPIHLRAHPCGIPP*RSSGRR Trigger: CCTTCTTCCAGAAGATCTTCAAGGAGGAATACCGCA...TGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCCCACGGAAGTCAGGGTaGAGAGGACGGTCCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFPRKSG*RGRSRI Trigger: TATTCTGGACCGTCCTCTTCACCCTGACTTCCGTGG...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 72 bp | GCTGTGCCGGCTTCACATGATTACGACTTCAATTCCTaGGTGGTCCAGGACATTGTGGAAATGCCAATACAT | + |
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Preference number: 4 (lower is better) Translates to: AVPASHDYDFNS*VVQDIVEMPIH Trigger: ATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAATCATGTGAAGCCGGCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | TACATGGGTAATCGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTTGTGCTTACCATCCAAGCTGTaGCAAAGTCCCCCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YMGNRLIYLAVKSVNSLCLPSKL*QSPPSR Trigger: CCTGGATGGGGGACTTTGTCACAGCTTGGATGGTAA...GCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCGATTACCCATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | GTCAACATGGCCGTAAGGTTTTCTATTTTCACGGTCCAGAACCGTATTTACAGCGGGTGTTTTCTCGGGTaGTTCCCATATCTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VNMAVRFSIFTVQNRIYSGCFLG*FPYLCC Trigger: ACAGCAAAGATATGGGAATCACCCGAGAAAACACCC...GCTGTAAATACGGTTCTGGACCGTGAAAATAGAAAACCTTACGGCCATGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR GCA 90 bp | ACCCATGGTGCATTGCAGCCCTCCGCTGACTGGATTTTACATTTATATTTATATGGTAAGCCACGATCATaGGAGACCAAGGATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: THGALQPSADWILHLYLYGKPRS*ETKDAG Trigger: TCCAGCATCCTTGGTCTCGCATGATCGTGGCTTACC...ATATAAATATAAATGTAAAATCCAGTCAGCGGAGGGCTGCAATGCACCATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TTACGACTTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGTCGCCCATGAAGTGTaGGAATTCCCAGTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LRLQFLGGPGHCGNANTFVAHEV*EFPVLH Trigger: ATGCAGGACTGGGAATTCCCACACTTCATGGGCGAC...AAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | GTCAACATGGCCGTAAGGTTTTCTATTTTCACGGTCCAGAACCGTATTTACAGCGAAAGAGAATTGTGCTaGAGAACATCGTCATCCACG | + |
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Preference number: 4 (lower is better) Translates to: VNMAVRFSIFTVQNRIYSERELC*RTSSST Trigger: CGTGGATGACGATGTTCTTCAGCACAATTCTCTTTC...GCTGTAAATACGGTTCTGGACCGTGAAAATAGAAAACCTTACGGCCATGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTTTGGCTGTGAGAGACTaGGTCCTCAGCGAATATCAA | + |
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Preference number: 4 (lower is better) Translates to: FNSLVVQDIVEMPIHLRALAVRD*VLSEYQ Trigger: TTGATATTCGCTGAGGACCCAGTCTCTCACAGCCAA...AGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | AAAAACAGTTTAATGTCTCAAGGCACCGCTATGGTTGGACATCAGATACATGGGGTCATCCACGACCCATaGTCTTCCCGGAACATTTTT | + |
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Preference number: 4 (lower is better) Translates to: KNSLMSQGTAMVGHQIHGVIHDP*SSRNIF Trigger: AAAAATGTTCCGGGAAGACCATGGGTCGTGGATGAC...CCCATGTATCTGATGTCCAACCATAGCGGTGCCTTGAGACATTAAACTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCACCCATCCTTGAAGATCTTCTaGAAGAAGGGAATCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLVVQDIVEMPIHLRAHPSLKIF*KKGILN Trigger: GTTCAAGATTCCCTTCTTCCAGAAGATCTTCAAGGA...TGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TACGACTTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGTCTTCCACAGAGACCTaGGTGTTTTCTCGGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: YDFNSLVVQDIVEMPIHLSSTET*VFSRVI Trigger: AATCACCCGAGAAAACACCCAGGTCTCTGTGGAAGA...CAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 72 bp | CGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTaGTGCGGTTGGGAAAAGCAATCTCTAGAGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: RLIYLAVKSVNS*CGWEKQSLEDH Trigger: ATGGTCCTCTAGAGATTGCTTTTCCCAACCGCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCCAGCAATCAGTCCTATaGGAATGGCCAGTAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFQQSVL*EWPVAI Trigger: TATGGCTACTGGCCATTCTCATAGGACTGATTGCTG...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 72 bp | TTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTaGAGAGCTCACCCAACTGTTTCTCTTAACCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVVQDIVEMPIH*RAHPTVSLNLC Trigger: ACAAAGGTTAAGAGAAACAGTTGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| 3UTR CAA 72 bp | CCACATGAGGTTTCGGTGAATGATTTCAGAATTCCCTaGGTCAACATGGCCGTAAGGTTTTCTATTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: PHEVSVNDFRIP*VNMAVRFSIFT Trigger: CGTGAAAATAGAAAACCTTACGGCCATGTTGACCAAGGGAATTCTGAAATCATTCACCGAAACCTCATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | GTAAAGTCAGTAAATAGCTTGTGCGGTTGGGAAAAGCAATCTCTAGAGGACCATCATTTACCTGTTATGTaGATGCGGTATTCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VKSVNSLCGWEKQSLEDHHLPVM*MRYSSL Trigger: CAAGGAGGAATACCGCATTCACATAACAGGTAAATG...ATGGTCCTCTAGAGATTGCTTTTCCCAACCGCACAAGCTATTTACTGACTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCGTCCATCAGAAGGATaGTGTTATAGATGTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FNSLVVQDIVEMPIHLRARPSEG*CYRCER Trigger: TCTCTCACATCTATAACACCATCCTTCTGATGGACG...AGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCGTATATCTTCTGCCCTaGGCCAATATACTGTCCATA | + |
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Preference number: 4 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFVYLLP*ANILSI Trigger: TATGGACAGTATATTGGCCCAGGGCAGAAGATATAC...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR TCA 90 bp | ACCCATGGTGCATTGCAGCCCTCCGCTGACTGGATTTTACATTTATATTTATATGTCCAAAGAACCAAATaGAGAATCCAAACCACACAA | + |
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Preference number: 4 (lower is better) Translates to: THGALQPSADWILHLYLYVQRTK*RIQTTQ Trigger: TTGTGTGGTTTGGATTCTTCATTTGGTTCTTTGGAC...ATATAAATATAAATGTAAAATCCAGTCAGCGGAGGGCTGCAATGCACCATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CCA 90 bp | TACATGGGTAATCGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTTGTGCAAAAGCTATCAAACTTaGAACAAAAGCCAGACACTT | + |
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Preference number: 4 (lower is better) Translates to: YMGNRLIYLAVKSVNSLCKSYQT*NKSQTL Trigger: AAGTGTCTGGCTTTTGTTCCAAGTTTGATAGCTTTT...GCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCGATTACCCATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 90 bp | TCCTCCTTGAAGATCTTCTGGAAGAAGGGAATCTTGAACTGCATGTaGGGCGTGTGCAACCCGGGGAGATTCACATCAACGTCGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: SSLKIFWKKGILNCM*GVCNPGRFTSTSPM Trigger: CATGGGCGACGTTGATGTGAATCTCCCCGGGTTGCACACGCCTCACATGCAGTTCAAGATTCCCTTCTTCCAGAAGATCTTCAAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TTACGACTTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTAGAGGCTGCCGGCTCTaGCTCAGCCTCCACCTCACT | + |
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Preference number: 5 (lower is better) Translates to: LRLQFLGGPGHCGNANTFRGCRL*LSLHLT Trigger: AGTGAGGTGGAGGCTGAGCAAGAGCCGGCAGCCTCT...AAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 90 bp | TCTTCCCGGAACATTTTTAACCGGAGCAACTGGCCAAATAAACGCTaGTGGAAGAGGAACTTGCCAGCAATCAGTCCTATGAGAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSRNIFNRSNWPNKR*WKRNLPAISPMRMA Trigger: GGCCATTCTCATAGGACTGATTGCTGGCAAGTTCCTCTTCCATCAGCGTTTATTTGGCCAGTTGCTCCGGTTAAAAATGTTCCGGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | GTAAAGTCAGTAAATAGCTTGTGCGGTTGGGAAAAGCAATCTCTAGAGGACCATAACCCACGGTTCAGTTaGTCCCAGCTGATCCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: VKSVNSLCGWEKQSLEDHNPRFS*SQLIQS Trigger: CGACTGGATCAGCTGGGACAAACTGAACCGTGGGTT...ATGGTCCTCTAGAGATTGCTTTTCCCAACCGCACAAGCTATTTACTGACTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 90 bp | CAAATAAACGCTGATGGAAGAGGAACTTGCCAGCAATCAGTCCTATaGGAATGGCCAGTAGCCATAGAAGCACCTTCAAAATCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QINADGRGTCQQSVL*EWPVAIEAPSKSSS Trigger: GCTGGAGGATTTTGAAGGTGCTTCTATGGCTACTGGCCATTCTCATAGGACTGATTGCTGGCAAGTTCCTCTTCCATCAGCGTTTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TACATGGGTAATCGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTTGTGCTCTTCCAGAAAGCTCTaGCGGATTTCCCCCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: YMGNRLIYLAVKSVNSLCSSRKL*RISPSQ Trigger: CTGACTGGGGGAAATCCGCAAGAGCTTTCTGGAAGA...GCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCGATTACCCATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTGTGATTCCCATATCTTaGCTGTGTTCCGAGGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: FNSLVVQDIVEMPIHLRAVIPIS*LCSEGD Trigger: ATCCCCCTCGGAACACAGCAAAGATATGGGAATCAC...AGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CCA 90 bp | AAGAGAAAGAGAATTGTGCTGAAGAACATCGTCATCCACGACCCATaGTCTTCCCGGAACATTTTTAACCGGAGCAACTGGCCAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: KRKRIVLKNIVIHDP*SSRNIFNRSNWPNK Trigger: TTTATTTGGCCAGTTGCTCCGGTTAAAAATGTTCCGGGAAGACCATGGGTCGTGGATGACGATGTTCTTCAGCACAATTCTCTTTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TTACGACTTCAATTCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTACAAAAGCCAGACACTaGACATCTAGGCTAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: LRLQFLGGPGHCGNANTFTKARH*TSRLAP Trigger: AGGGGCTAGCCTAGATGTCAAGTGTCTGGCTTTTGT...AAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGAATTGAAGTCGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | GTAAAGTCAGTAAATAGCTTGTGCGGTTGGGAAAAGCAATCTCTAGAGGACCATAGGGTAGGGCTTGTCTaGAAGCATCATATCAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: VKSVNSLCGWEKQSLEDHRVGLV*KHHISY Trigger: GTAACTGATATGATGCTTCAAGACAAGCCCTACCCT...ATGGTCCTCTAGAGATTGCTTTTCCCAACCGCACAAGCTATTTACTGACTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TCCTTGGTGGTCCAGGACATTGTGGAAATGCCAATACATTTGAGAGCTCACCCACATTCCCAGGATAGCTaGGTTCTATTTAAATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLVVQDIVEMPIHLRAHPHSQDS*VLFKSF Trigger: AAAGGATTTAAATAGAACCAAGCTATCCTGGGAATG...TGGGTGAGCTCTCAAATGTATTGGCATTTCCACAATGTCCTGGACCACCAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CCA 90 bp | GTTTCCAACAACAATAACATTAGCTTCTGTTTGGCTGTGAGAGACTaGGTCCTCAGCGAATATCAAGAAGTTAAAGAAGATGACCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VSNNNNISFCLAVRD*VLSEYQEVKEDDQV Trigger: TACCTGGTCATCTTCTTTAACTTCTTGATATTCGCTGAGGACCCAGTCTCTCACAGCCAAACAGAAGCTAATGTTATTGTTGTTGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | TACATGGGTAATCGGCTAATCTACCTTGCTGTAAAGTCAGTAAATAGCTTGTGCAAAATGATCCTCACGTaGCCTTTCTTCCAGAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: YMGNRLIYLAVKSVNSLCKMILT*PFFQKA Trigger: AGCTTTCTGGAAGAAAGGCAACGTGAGGATCATTTT...GCACAAGCTATTTACTGACTTTACAGCAAGGTAGATTAGCCGATTACCCATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | AATTTAAAAAGGCAATCTCTATGCTTCTCTGCAGTCCCGCATCAAAGTCACTTCCAAAAGCTATCAAACTaGGAACAAAAGCCAGACACT | + |
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Preference number: 5 (lower is better) Translates to: NLKRQSLCFSAVPHQSHFQKLSN*EQKPDT Trigger: AGTGTCTGGCTTTTGTTCCAAGTTTGATAGCTTTTG...GAAGTGACTTTGATGCGGGACTGCAGAGAAGCATAGAGATTGCCTTTTTAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS-3UTR CAA 90 bp | CGCATCAAAGTCACTTCACTGCTAAACAGTGAACCAAGAGAACTTTCTACAACCAGTATAAGTTTTATCTaGATTCTCCATCCCTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RIKVTSLLNSEPRELSTTSISFI*ILHPLL Trigger: GAGCAAGGGATGGAGAATCAAGATAAAACTTATACT...GGTTGTAGAAAGTTCTCTTGGTTCACTGTTTAGCAGTGAAGTGACTTTGATGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 90 bp | AAGGCTCGGGAGACCTCATCACTGGGCAAAAACCCACGGTTCAGTTaGTCCCAGCTGATCCAGTCGGTCGTGATGACAAGCACCACCACG | + |
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Preference number: 6 (lower is better) Translates to: KARETSSLGKNPRFS*SQLIQSVVMTSTTT Trigger: CGTGGTGGTGCTTGTCATCACGACCGACTGGATCAGCTGGGACAAACTGAACCGTGGGTTTTTGCCCAGTGATGAGGTCTCCCGAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CCA 72 bp | CCCGGGGAGATTCACATCAACGTCGCCCATGAAGTGTaGGAATTCCCAGTCCTGCATCACAATAAGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PGEIHINVAHEV*EFPVLHHNKEV Trigger: GACCTCCTTATTGTGATGCAGGACTGGGAATTCCCACACTTCATGGGCGACGTTGATGTGAATCTCCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 72 bp | GAGACCTCATCACTGGGCAAAAACCCACGGTTCAGTTaGTCCCAGCTGATCCAGTCGGTCGTGATGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: ETSSLGKNPRFS*SQLIQSVVMTS Trigger: GCTTGTCATCACGACCGACTGGATCAGCTGGGACAAACTGAACCGTGGGTTTTTGCCCAGTGATGAGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 90 bp | GAAGTCAGGGTGAAGAGGACGGTCCAGAATAAAATGATCCTCACGTaGCCTTTCTTCCAGAAAGCTCTTGCGGATTTCCCCCAGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: EVRVKRTVQNKMILT*PFFQKALADFPQSG Trigger: CCCTGACTGGGGGAAATCCGCAAGAGCTTTCTGGAAGAAAGGCAACGTGAGGATCATTTTATTCTGGACCGTCCTCTTCACCCTGACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 72 bp | TGTCTTGAAGCATCATATCAGTTACCATCCAAGCTGTaGCAAAGTCCCCCATCCAGGTCCCCACAGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: CLEASYQLPSKL*QSPPSRSPQQL Trigger: TAGCTGCTGTGGGGACCTGGATGGGGGACTTTGTCACAGCTTGGATGGTAACTGATATGATGCTTCAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 72 bp | AAGATCTTCTGGAAGAAGGGAATCTTGAACTGCATGTaGGGCGTGTGCAACCCGGGGAGATTCACATCAACG | + |
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Preference number: 6 (lower is better) Translates to: KIFWKKGILNCM*GVCNPGRFTST Trigger: CGTTGATGTGAATCTCCCCGGGTTGCACACGCCTCACATGCAGTTCAAGATTCCCTTCTTCCAGAAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 72 bp | TCTTGCGGATTTCCCCCAGTCAGGGTAGGGCTTGTCTaGAAGCATCATATCAGTTACCATCCAAGCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SCGFPPVRVGLV*KHHISYHPSCD Trigger: GTCACAGCTTGGATGGTAACTGATATGATGCTTCAAGACAAGCCCTACCCTGACTGGGGGAAATCCGCAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CCA 72 bp | AGAATTGTGCTGAAGAACATCGTCATCCACGACCCATaGTCTTCCCGGAACATTTTTAACCGGAGCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RIVLKNIVIHDP*SSRNIFNRSNW Trigger: CCAGTTGCTCCGGTTAAAAATGTTCCGGGAAGACCATGGGTCGTGGATGACGATGTTCTTCAGCACAATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 72 bp | GTGAAGAGGACGGTCCAGAATAAAATGATCCTCACGTaGCCTTTCTTCCAGAAAGCTCTTGCGGATTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VKRTVQNKMILT*PFFQKALADFP Trigger: GGGGAAATCCGCAAGAGCTTTCTGGAAGAAAGGCAACGTGAGGATCATTTTATTCTGGACCGTCCTCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 72 bp | GCTGATGGAAGAGGAACTTGCCAGCAATCAGTCCTATaGGAATGGCCAGTAGCCATAGAAGCACCTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ADGRGTCQQSVL*EWPVAIEAPSK Trigger: TTTTGAAGGTGCTTCTATGGCTACTGGCCATTCTCATAGGACTGATTGCTGGCAAGTTCCTCTTCCATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS TCA 72 bp | TTTCCAACAACAATAACATTAGCTTCTGTTTGGCTGTaGGAGACTGGGTCCTCAGCGAATATCAAGAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FPTTITLASVWL*ETGSSANIKKL Trigger: TAACTTCTTGATATTCGCTGAGGACCCAGTCTCTCACAGCCAAACAGAAGCTAATGTTATTGTTGTTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CCA 72 bp | ACTTTCAGAGTCTTTCACTGTGTATATCTTCTGCCCTaGGCCAATATACTGTCCATATTCATGAGGTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TFRVFHCVYLLP*ANILSIFMRFV Trigger: TACAAACCTCATGAATATGGACAGTATATTGGCCCAGGGCAGAAGATATACACAGTGAAAGACTCTGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 72 bp | AAAACAGTTTCCAACAACAATAACATTAGCTTCTGTTaGGCTGTGAGAGACTGGGTCCTCAGCGAATATCAA | + |
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Preference number: 6 (lower is better) Translates to: KTVSNNNNISFC*AVRDWVLSEYQ Trigger: TTGATATTCGCTGAGGACCCAGTCTCTCACAGCCAAACAGAAGCTAATGTTATTGTTGTTGGAAACTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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| CDS CAA 72 bp | CATGCGAGTATAAGTTTTATCTTGATTCTCCATCCCTaGCTCATTTTTCAGAAACCGTCCAAAGAACCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HASISFILILHP*LIFQKPSKEPN Trigger: ATTTGGTTCTTTGGACGGTTTCTGAAAAATGAGCAAGGGATGGAGAATCAAGATAAAACTTATACTCGCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080141.6 |
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