Pregenerated sensors for TMEM115 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010045Ensembl transcript IDs: ENSMUST00000010189.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGAACCCCCAGCAGACCCTCTTCCCTCTCCTCAGAGCAGTCAGTaGTCTGCAGTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: QEPPADPLPSPQSSQ*SAVAETDREGMGVE Trigger: TTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTGCAGAGCACTGACTGCTCTGAGGAGAGGGAAGAGGGTCTGCTGGGGGTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 90 bp | TTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTaGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACAGCAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: LAARSDGPVENTWEL*QPRLGTVVTATAEG Trigger: CCCTTCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCGGGCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 90 bp | GAAGCAGGTTTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATACCTaGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACA | + |
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Preference number: 1 (lower is better) Translates to: EAGLAARSDGPVENT*ELWQPRLGTVVTAT Trigger: TGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCGGGCAGCCAAACCTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR GCA 90 bp | AAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTaGCACAGCAGAAGGGCACAAGAAACCCTGATGAGAATGCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: KYLGAVAAPARHSCH*HSRRAQETLMRMQS Trigger: AGACTGCATTCTCATCAGGGTTTCTTGTGCCCTTCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 90 bp | TGCAAATGGGGATCTGCACTGGCTGCTGCTCAGAGACCCCGTACCTaGCATTGTGGTTGTCTGGAGTCAGAACCAGGTAGCAACAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CKWGSALAAAQRPRT*HCGCLESEPGSNKG Trigger: ACCCTTGTTGCTACCTGGTTCTGACTCCAGACAACCACAATGCCAGGTACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR TCA 90 bp | CACCAGTGTCCCTGCAGCCACTTCCTTGGTGAGGAATTGTACCGCTaGGGTACAATCTTACTGCAAATGGGGATCTGCACTGGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: HQCPCSHFLGEELYR*GTILLQMGICTGCC Trigger: GCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGATTGTACCTCAGCGGTACAATTCCTCACCAAGGAAGTGGCTGCAGGGACACTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 90 bp | ATTGTACCGCTGAGGTACAATCTTACTGCAAATGGGGATCTGCACTaGCTGCTGCTCAGAGACCCCGTACCTGGCATTGTGGTTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: IVPLRYNLTANGDLH*LLLRDPVPGIVVVW Trigger: CCAGACAACCACAATGCCAGGTACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGATTGTACCTCAGCGGTACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR TCA 90 bp | CGGAGCCCAGGAGCCAGACCTCAAAGAACCGCTTTATTGATACTGTaGAGCAGGTTTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATAC | + |
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Preference number: 1 (lower is better) Translates to: RSPGARPQRTALLIL*SRFGCPLRWSCRKY Trigger: GTATTTTCTACAGGACCATCTGAGCGGGCAGCCAAACCTGCTTCACAGTATCAATAAAGCGGTTCTTTGAGGTCTGGCTCCTGGGCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTCCCACAAATCCTTGCCTTaGCTCGGGGCTGTTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: ENAVWGWAGMFRPTLAGSHKSLP*LGAVGN Trigger: GTTGCCAACAGCCCCGAGCCAAGGCAAGGATTTGTG...GGACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR GCA 90 bp | CGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCTGGCACCAGTGTCCCTaGAGCCACTTCCTTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RSDGPVENTWELWQPRLGWHQCP*SHFLGE Trigger: CTCACCAAGGAAGTGGCTGCAGGGACACTGGTGCCA...GCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTCAGAGACCCCGTACCTaGCATTGTGGTTGTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: MRMQSGGGRGCSDPHWLGQRPRT*HCGCLE Trigger: CTCCAGACAACCACAATGCCAGGTACGGGGTCTCTG...ACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CCA 90 bp | TACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACAGCAGATTGGCTCGGGGCTGTTaGCAACCAGTTTCAGACATA | + |
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Preference number: 2 (lower is better) Translates to: YLGAVAAPARHSCHCHSRLARGC*QPVSDI Trigger: TATGTCTGAAACTGGTTGCCAACAGCCCCGAGCCAA...TCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CAA 90 bp | TGTCTGGAGTCAGAACCAGGTAGCAACAAGGGTCCTGTGTTAGTGTaGTCCAGACACAGCGGAAGGCCACAGGAACCCCCAGCAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: CLESEPGSNKGPVLV*SRHSGRPQEPPADP Trigger: AGGGTCTGCTGGGGGTTCCTGTGGCCTTCCGCTGTGTCTGGACAACACTAACACAGGACCCTTGTTGCTACCTGGTTCTGACTCCAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCCTTGCCTTGGCTCGGGGCTGTTGGCAACCAGTTTCAGACATAAGGGCAATGGGGATCTGCACTaGCTGCTGCTCAGAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: TNPCLGSGLLATSFRHKGNGDLH*LLLRDP Trigger: GGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATT...GCCCTTATGTCTGAAACTGGTTGCCAACAGCCCCGAGCCAAGGCAAGGATTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACAGCAGAAGGACCCCGTACCTGGCATaGTGGTTGTCTGGAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LGAVAAPARHSCHCHSRRTPYLA*WLSGVR Trigger: TCTGACTCCAGACAACCACAATGCCAGGTACGGGGT...CCTTCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | GGCACAAGAAACCCTGATGAGAATGCAGTCTGGGGGTaGGCGGGGATGTTCAGACCCACACTGGCTGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GTRNPDENAVWG*AGMFRPTLAGS Trigger: GGACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTCTCATCAGGGTTTCTTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR GCA 72 bp | GGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTaGCACAGCAGAAGGGCACAAGAAACCCTGATGAGA | + |
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Preference number: 3 (lower is better) Translates to: GAVAAPARHSCH*HSRRAQETLMR Trigger: TCTCATCAGGGTTTCTTGTGCCCTTCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | TTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATACCTaGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LAARSDGPVENT*ELWQPRLGTVV Trigger: GACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCGGGCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CAA 90 bp | GAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACACCTGCAGCCACTTCCTaGGTGAGGAATTGTACCGCT | + |
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Preference number: 3 (lower is better) Translates to: ENTWELWQPRLGTVVTATPAATS*VRNCTA Trigger: AGCGGTACAATTCCTCACCAAGGAAGTGGCTGCAGG...TGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | CAGAAGGGCACAAGAAACCCTGATGAGAATGCAGTCTaGGGGTGGGCGGGGATGTTCAGACCCACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: QKGTRNPDENAV*GWAGMFRPTLA Trigger: AGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTCTCATCAGGGTTTCTTGTGCCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | CGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTaGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: RSDGPVENTWEL*QPRLGTVVTAT Trigger: TGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | CTGCTCAGAGACCCCGTACCTGGCATTGTGGTTGTCTaGAGTCAGAACCAGGTAGCAACAAGGGTCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LLRDPVPGIVVV*SQNQVATRVLC Trigger: ACACAGGACCCTTGTTGCTACCTGGTTCTGACTCCAGACAACCACAATGCCAGGTACGGGGTCTCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR TCA 72 bp | GGAGCCCAGGAGCCAGACCTCAAAGAACCGCTTTATTaGTACTGTGAAGCAGGTTTGGCTGCCCGCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: GAQEPDLKEPLY*YCEAGLAARSD Trigger: ATCTGAGCGGGCAGCCAAACCTGCTTCACAGTATCAATAAAGCGGTTCTTTGAGGTCTGGCTCCTGGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | CTGAGGTACAATCTTACTGCAAATGGGGATCTGCACTaGCTGCTGCTCAGAGACCCCGTACCTGGCATTGTG | + |
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Preference number: 3 (lower is better) Translates to: LRYNLTANGDLH*LLLRDPVPGIV Trigger: CACAATGCCAGGTACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGATTGTACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR-3UTR CAA 90 bp | TACTGTGAAGCAGGTTTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATACCTGGCTTGGCTCGGGGCTGTaGGCAACCAGTTTCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: YCEAGLAARSDGPVENTWLGSGL*ATSFRH Trigger: ATGTCTGAAACTGGTTGCCAACAGCCCCGAGCCAAG...CCAGGTATTTTCTACAGGACCATCTGAGCGGGCAGCCAAACCTGCTTCACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR TCA 72 bp | GGAGCCAGACCTCAAAGAACCGCTTTATTGATACTGTaGAGCAGGTTTGGCTGCCCGCTCAGATGGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GARPQRTALLIL*SRFGCPLRWSC Trigger: ACAGGACCATCTGAGCGGGCAGCCAAACCTGCTTCACAGTATCAATAAAGCGGTTCTTTGAGGTCTGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CCA 72 bp | AGGAATTGTACCGCTGAGGTACAATCTTACTGCAAATaGGGATCTGCACTGGCTGCTGCTCAGAGACCCCGT | + |
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Preference number: 3 (lower is better) Translates to: RNCTAEVQSYCK*GSALAAAQRPR Trigger: ACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGATTGTACCTCAGCGGTACAATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR TCA 72 bp | CCCTGCAGCCACTTCCTTGGTGAGGAATTGTACCGCTaGGGTACAATCTTACTGCAAATGGGGATCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: PCSHFLGEELYR*GTILLQMGICT Trigger: AGTGCAGATCCCCATTTGCAGTAAGATTGTACCTCAGCGGTACAATTCCTCACCAAGGAAGTGGCTGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR TCA 90 bp | CGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCAAAGGTAGCCTGGGGTaGCGGCCAGGCAGCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RSDGPVENTWELWQPRLGKGSLG*RPGSPC Trigger: ACACGGGCTGCCTGGCCGTCACCCCAGGCTACCTTT...GCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR TCA 90 bp | GTTGTCCAGACACAGCGGAAGGCCACAGGAACCCCCAGCAGACCCTCTTCCCTCAGGAAGCCATGTAGGTaGGGAGGTAGGCGAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VVQTQRKATGTPSRPSSLRKPCR*GGRRGP Trigger: GGGCCCTCGCCTACCTCCTCACCTACATGGCTTCCT...GAGGGAAGAGGGTCTGCTGGGGGTTCCTGTGGCCTTCCGCTGTGTCTGGACAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | GCACTGGCTGCTGCTCAGAGACCCCGTACCTGGCATTGTGGTTGTCTGGAGTCATGGCGCTGGCCAGGATaGCCCCCAGATGTTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: ALAAAQRPRTWHCGCLESWRWPG*PPDVGG Trigger: CCCGCCAACATCTGGGGGCCATCCTGGCCAGCGCCA...TGACTCCAGACAACCACAATGCCAGGTACGGGGTCTCTGAGCAGCAGCCAGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACAGCAGATGTTCCATGAGCCCGTaGGTGGCCAGGGTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: YLGAVAAPARHSCHCHSRCSMSP*VARVQI Trigger: GATCTGGACCCTGGCCACCCACGGGCTCATGGAACA...TCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR TCA 90 bp | CAGTGCTCTGCAGTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAAGAACTGCTGCGCTCCGCATCTTaGGGGTCTGTGCCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QCSAVAETDREGMGVEELLRSAS*GSVPGR Trigger: CCTCCCAGGCACAGACCCTCAAGATGCGGAGCGCAG...CAGTTCTTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTGCAGAGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR TCA 90 bp | GAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTCCCCTCTTCAGCCGCTCATTaGGAGCCTTTAGGGCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: ECSLGVGGDVQTHTGWVPSSAAH*EPLGLV Trigger: AACTAGCCCTAAAGGCTCTCAATGAGCGGCTGAAGA...GGGGACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | AATCTTACTGCAAATGGGGATCTGCACTGGCTGCTGCTCAGAGACCCCGTACCTCCTTCACCACCACGCTaGCGCTGGCCAGGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NLTANGDLHWLLLRDPVPPSPPR*RWPGWP Trigger: GGGCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGG...AGGTACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | GAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTCCCCTCCAGATCCAGAAGTTaGGTGGGAAAAGGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ECSLGVGGDVQTHTGWVPSRSRS*VGKGSL Trigger: CAGGCTACCTTTTCCCACCCAACTTCTGGATCTGGA...GGGGACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TACTGTGAAGCAGGTTTGGCTGCCCGCTCAGATGGTCCTGTAGAAAATACCTGGGCCAGGGCTGGGCTCTaGAGCAGCGTGGCCAACCGG | + |
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Preference number: 4 (lower is better) Translates to: YCEAGLAARSDGPVENTWARAGL*SSVANR Trigger: CCGGTTGGCCACGCTGCTCCAGAGCCCAGCCCTGGC...CCAGGTATTTTCTACAGGACCATCTGAGCGGGCAGCCAAACCTGCTTCACAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | GTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAAGAACTGCACTCAAAGTGGTACCACGGCGCACAGTaGCTTCACCACCACGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VAETDREGMGVEELHSKWYHGAQ*LHHHAG Trigger: GCCAGCGTGGTGGTGAAGGCACTGTGCGCCGTGGTA...CCACTTTGAGTGCAGTTCTTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTCTGCAGTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAAGAACTGCCACGTCCCACACGTaGTGTTCCATGAGCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVLCSSRDGSGRHGSRRTATSHT*CSMSPW Trigger: CCACGGGCTCATGGAACAGCACGTGTGGGACGTGGC...AGTTCTTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTGCAGAGCACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | GAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTCCCCCAGTCTCCCATAGTTTaGTTGAGGGCTACCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: ECSLGVGGDVQTHTGWVPQSPIV*LRATRT Trigger: TGTTCTGGTAGCCCTCAAGCAAACTATGGGAGACTG...GGGGACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | ACACAGCGGAAGGCCACAGGAACCCCCAGCAGACCCTCTTCCCTCTCCTCAGAGGATCCAGAAGTTGGGTaGGAAAAGGTAGCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TQRKATGTPSRPSSLSSEDPEVG*EKVAWG Trigger: ACCCCAGGCTACCTTTTCCCACCCAACTTCTGGATC...CTCTGAGGAGAGGGAAGAGGGTCTGCTGGGGGTTCCTGTGGCCTTCCGCTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTCTGCAGTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAAGAACTACGCTGACGCGGACCTaGGGCACTCGCAGAACCACA | + |
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Preference number: 4 (lower is better) Translates to: SVLCSSRDGSGRHGSRRTTLTRT*GTRRTT Trigger: TGTGGTTCTGCGAGTGCCCCAGGTCCGCGTCAGCGT...AGTTCTTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTGCAGAGCACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | CGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCTTGAGGGTCTGTGCCTaGGAGGCTGATAGTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: RSDGPVENTWELWQPRLGLRVCA*EADSDG Trigger: TCCATCACTATCAGCCTCCCAGGCACAGACCCTCAA...GCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | GCTGCTGCTCAGAGACCCCGTACCTGGCATTGTGGTTGTCTGGAGTCAGAACCACCTTCCCTGGGGGCGTaGAAGCTTCTTCTAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AAAQRPRTWHCGCLESEPPSLGA*KLLLRA Trigger: TGCCCTTAGAAGAAGCTTCCACGCCCCCAGGGAAGG...TGGTTCTGACTCCAGACAACCACAATGCCAGGTACGGGGTCTCTGAGCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR TCA 90 bp | CTGGCTGGGTCCCCAGAACATTTTTGGCAAACACAAATCCTTGCCTTGGCTCGGCCACCGAGAAGAAGATaGGCAGCTCCAAGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LAGSPEHFWQTQILALARPPRRR*AAPRLP Trigger: GGGGAGCCTTGGAGCTGCTCATCTTCTTCTCGGTGG...CCGAGCCAAGGCAAGGATTTGTGTTTGCCAAAAATGTTCTGGGGACCCAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | GGTAGCAACAAGGGTCCTGTGTTAGTGTTGTCCAGACACAGCGGAAGGCCACAGTTCACCAGGAGGCCGTaGACCAAGTTCGCTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GSNKGPVLVLSRHSGRPQFTRRP*TKFASS Trigger: GCTGCTAGCGAACTTGGTGCACGGCCTCCTGGTGAA...CTGTGGCCTTCCGCTGTGTCTGGACAACACTAACACAGGACCCTTGTTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGGGCACAAGAAACCCTGATGAGAATGCAGTCTGGGGGTGGGCGGGGACTTCGTCATCATCCATaGTGGGCCAGGCTGACTGAT | + |
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Preference number: 4 (lower is better) Translates to: SRRAQETLMRMQSGGGRGLRHHP*WARLTD Trigger: ATCAGTCAGCCTGGCCCAGCATGGATGATGACGAAG...TCCCCGCCCACCCCCAGACTGCATTCTCATCAGGGTTTCTTGTGCCCTTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR GCA 90 bp | GAGCAGTCAGTGCTCTGCAGTAGCCGAGACGGATCGGGAAGGCATGGGAGTAGAAGGACTGTCCGTTTTTaGCCCAGCTTCCTCTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: EQSVLCSSRDGSGRHGSRRTVRF*PSFLFV Trigger: GACGAAGAGGAAGCTGGGGCAAAAACGGACAGTCCT...TCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTGCAGAGCACTGACTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TGGTCCTGTAGAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCGTCATCATCCATGCTaGGCCAGGCTGACTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: WSCRKYLGAVAAPARHSCRHHPC*ARLTDP Trigger: AGGATCAGTCAGCCTGGCCCAGCATGGATGATGACG...ACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTTGTCTGGAGTCAGAACCAGGTAGCAACAAGGGTCCTGTGTTAGTGTTGTGGGAAAAGGTAGCCTaGGGTGACGGCCAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CGCLESEPGSNKGPVLVLWEKVA*GDGQAA Trigger: GGCTGCCTGGCCGTCACCCCAGGCTACCTTTTCCCA...CAACACTAACACAGGACCCTTGTTGCTACCTGGTTCTGACTCCAGACAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CAA 72 bp | TCAGAACCAGGTAGCAACAAGGGTCCTGTGTTAGTGTaGTCCAGACACAGCGGAAGGCCACAGGAACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SEPGSNKGPVLV*SRHSGRPQEPP Trigger: TGGGGGTTCCTGTGGCCTTCCGCTGTGTCTGGACAACACTAACACAGGACCCTTGTTGCTACCTGGTTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| 3UTR CAA 72 bp | TTGGCAAACACAAATCCTTGCCTTGGCTCGGGGCTGTaGGCAACCAGTTTCAGACATAAGGGCTGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LANTNPCLGSGL*ATSFRHKGWPR Trigger: CCTGGGCCAGCCCTTATGTCTGAAACTGGTTGCCAACAGCCCCGAGCCAAGGCAAGGATTTGTGTTTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | CGCTCAGATGGTCCTGTAGAAAATACCTGGGAGCTGTGGCAGCCCCGGCTAGGCCGCTTCACTGTCTTCTaGCATATCTTTACTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: RSDGPVENTWELWQPRLGRFTVF*HIFTFT Trigger: GGTGAAAGTAAAGATATGCCAGAAGACAGTGAAGCG...GCCTAGCCGGGGCTGCCACAGCTCCCAGGTATTTTCTACAGGACCATCTGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CCA 90 bp | TGTGGTTGTCTGGAGTCAGAACCAGGTAGCAACAAGGGTCCTGTGTTAGTGTTGTCTCCGGGAAGAAGGTaGCAAAAGCAAAATGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CGCLESEPGSNKGPVLVLSPGRR*QKQNGQ Trigger: CTGACCATTTTGCTTTTGCCACCTTCTTCCCGGAGA...CAACACTAACACAGGACCCTTGTTGCTACCTGGTTCTGACTCCAGACAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 90 bp | CCGGCCACAACCACTGTGGCCAGGCTAATGGCCACGTCCCACACGTaGTGTTCCATGAGCCCGTGGGTGGCCAGGGTCCAGATCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: PATTTVARLMATSHT*CSMSPWVARVQIQK Trigger: CTTCTGGATCTGGACCCTGGCCACCCACGGGCTCATGGAACAGCACGTGTGGGACGTGGCCATTAGCCTGGCCACAGTGGTTGTGGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | GGTAGAGAAACAGTACCACGGCGCACAGTGCCTTCACCACCACGCTaGCGCTGGCCAGGATGGCCCCCAGATGTTGGCGGGCACCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: GRETVPRRTVPSPPR*RWPGWPPDVGGHQV Trigger: TACCTGGTGCCCGCCAACATCTGGGGGCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGGCACTGTGCGCCGTGGTACTGTTTCTCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | TTCCATGAGCCCGTGGGTGGCCAGGGTCCAGATCCAGAAGTTGGGTaGGAAAAGGTAGCCTGGGGTGACGGCCAGGCAGCCCGTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FHEPVGGQGPDPEVG*EKVAWGDGQAARVH Trigger: GTGGACACGGGCTGCCTGGCCGTCACCCCAGGCTACCTTTTCCCACCCAACTTCTGGATCTGGACCCTGGCCACCCACGGGCTCATGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | GCAGCCCAAAGCCGTAGGAAGCCAGGGCTGGGCTCTGGAGCAGCGTaGCCAACCGGAGGAGTAGCAGCAACGCCAGCAACAGCATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AAQSRRKPGLGSGAA*PTGGVAATPATAWE Trigger: TTCCCATGCTGTTGCTGGCGTTGCTGCTACTCCTCCGGTTGGCCACGCTGCTCCAGAGCCCAGCCCTGGCTTCCTACGGCTTTGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | GGTGGCCAGGGTCCAGATCCAGAAGTTGGGTGGGAAAAGGTAGCCTaGGGTGACGGCCAGGCAGCCCGTGTCCACAGCGAAGGAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGQGPDPEVGWEKVA*GDGQAARVHSEGKQ Trigger: CTGCTTTCCTTCGCTGTGGACACGGGCTGCCTGGCCGTCACCCCAGGCTACCTTTTCCCACCCAACTTCTGGATCTGGACCCTGGCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 90 bp | CACAGCGAAGGAAAGCAGGTAGAGAAACAGTACCACGGCGCACAGTaGCTTCACCACCACGCTGGCGCTGGCCAGGATGGCCCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSEGKQVEKQYHGAQ*LHHHAGAGQDGPQM Trigger: CATCTGGGGGCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGGCACTGTGCGCCGTGGTACTGTTTCTCTACCTGCTTTCCTTCGCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CAA 90 bp | ATGAGAATGCAGTCTGGGGGTGGGCGGGGATGTTCAGACCCACACTGGCTGGGTTCTGCGCTCCGCATCTaGAGGGTCTGTGCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MRMQSGGGRGCSDPHWLGSALRI*RVCAWE Trigger: CTCCCAGGCACAGACCCTCAAGATGCGGAGCGCAGA...ACCCAGCCAGTGTGGGTCTGAACATCCCCGCCCACCCCCAGACTGCATTCTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 90 bp | ACGCGGACCTGGGGCACTCGCAGAACCACACAGTCTCCCATAGTTTaGTTGAGGGCTACCAGAACACCACCTAGGAAACCCAGGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TRTWGTRRTTQSPIV*LRATRTPPRKPRAP Trigger: CGGCGCCCTGGGTTTCCTAGGTGGTGTTCTGGTAGCCCTCAAGCAAACTATGGGAGACTGTGTGGTTCTGCGAGTGCCCCAGGTCCGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | CTCGGCCCCGGCTATGGCGCTGATAGAAGCGAAGATACACCCAACTaGATAGCAGCCCAAAGCCGTAGGAAGCCAGGGCTGGGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGPGYGADRSEDTPN*IAAQSRRKPGLGSG Trigger: TCCAGAGCCCAGCCCTGGCTTCCTACGGCTTTGGGCTGCTATCCAGTTGGGTGTATCTTCGCTTCTATCAGCGCCATAGCCGGGGCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 90 bp | AGCAGCAACGCCAGCAACAGCATGGGAACGACGCTGACGCGGACCTaGGGCACTCGCAGAACCACACAGTCTCCCATAGTTTGCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SSNASNSMGTTLTRT*GTRRTTQSPIVCLR Trigger: CCTCAAGCAAACTATGGGAGACTGTGTGGTTCTGCGAGTGCCCCAGGTCCGCGTCAGCGTCGTTCCCATGCTGTTGCTGGCGTTGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CAA 90 bp | TACCTGGGAGCTGTGGCAGCCCCGGCTAGGCACAGTTGTCACTGCCACAGCAGAGAGGACTGTCCGTTTTaGCCCCAGCTTCCTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: YLGAVAAPARHSCHCHSREDCPF*PQLPLR Trigger: ACGAAGAGGAAGCTGGGGCAAAAACGGACAGTCCTC...TCTGCTGTGGCAGTGACAACTGTGCCTAGCCGGGGCTGCCACAGCTCCCAGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS TCA 90 bp | TCATTGAGAGCCTTTAGGGCTAGTTGCCTTCTGCGCTCCGCATCTTaGGGGTCTGTGCCTGGGAGGCTGATAGTGATGGACGACGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SLRAFRASCLLRSAS*GSVPGRLIVMDDGA Trigger: AGCGCCGTCGTCCATCACTATCAGCCTCCCAGGCACAGACCCTCAAGATGCGGAGCGCAGAAGGCAACTAGCCCTAAAGGCTCTCAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS TCA 90 bp | TGCTGGGCCAGGCTGACTGATCCTCCACTCTCTTCAGCCGCTCATTaGGAGCCTTTAGGGCTAGTTGCCTTCTGCGCTCCGCATCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: CWARLTDPPLSSAAH*EPLGLVAFCAPHLE Trigger: CTCAAGATGCGGAGCGCAGAAGGCAACTAGCCCTAAAGGCTCTCAATGAGCGGCTGAAGAGAGTGGAGGATCAGTCAGCCTGGCCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS TCA 90 bp | GCCCCAGCTTCCTCTTCGTCATCATCCATGCTGGGCCAGGCTGACTaGTCCTCCACTCTCTTCAGCCGCTCATTGAGAGCCTTTAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: APASSSSSSMLGQAD*SSTLFSRSLRAFRA Trigger: AGCCCTAAAGGCTCTCAATGAGCGGCTGAAGAGAGTGGAGGATCAGTCAGCCTGGCCCAGCATGGATGATGACGAAGAGGAAGCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 90 bp | CGCTTCACTGTCTTCTGGCATATCTTTACTTTCACCAGGAGGCCGTaGACCAAGTTCGCTAGCAGCCCCACCACCGGTTGCAGGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: RFTVFWHIFTFTRRP*TKFASSPTTGCRIS Trigger: GGAGATCCTGCAACCGGTGGTGGGGCTGCTAGCGAACTTGGTGCACGGCCTCCTGGTGAAAGTAAAGATATGCCAGAAGACAGTGAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 90 bp | GAGGACTGTCCGTTTTTGCCCCAGCTTCCTCTTCGTCATCATCCATaGTGGGCCAGGCTGACTGATCCTCCACTCTCTTCAGCCGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: EDCPFLPQLPLRHHP*WARLTDPPLSSAAH Trigger: ATGAGCGGCTGAAGAGAGTGGAGGATCAGTCAGCCTGGCCCAGCATGGATGATGACGAAGAGGAAGCTGGGGCAAAAACGGACAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS-3UTR CAA 90 bp | TCTTACTGCAAATGGGGATCTGCACTGGCTGCTGCTCAGAGACCCCGTACCTGGCTCTTCAGCCGCTCATaGAGAGCCTTTAGGGCTAGT | + |
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Preference number: 5 (lower is better) Translates to: SYCKWGSALAAAQRPRTWLFSRS*RAFRAS Trigger: ACTAGCCCTAAAGGCTCTCAATGAGCGGCTGAAGAG...CCAGGTACGGGGTCTCTGAGCAGCAGCCAGTGCAGATCCCCATTTGCAGTAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | ACAGTGCCTTCACCACCACGCTGGCGCTGGCCAGGATaGCCCCCAGATGTTGGCGGGCACCAGGTAGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: TVPSPPRWRWPG*PPDVGGHQVGR Trigger: GCGCCCTACCTGGTGCCCGCCAACATCTGGGGGCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGGCACTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | ACAGTACCACGGCGCACAGTGCCTTCACCACCACGCTaGCGCTGGCCAGGATGGCCCCCAGATGTTGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TVPRRTVPSPPR*RWPGWPPDVGG Trigger: CCCGCCAACATCTGGGGGCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGGCACTGTGCGCCGTGGTACTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | CCCGTGGGTGGCCAGGGTCCAGATCCAGAAGTTGGGTaGGAAAAGGTAGCCTGGGGTGACGGCCAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVGGQGPDPEVG*EKVAWGDGQAA Trigger: GGCTGCCTGGCCGTCACCCCAGGCTACCTTTTCCCACCCAACTTCTGGATCTGGACCCTGGCCACCCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 72 bp | ACCACTGTGGCCAGGCTAATGGCCACGTCCCACACGTaGTGTTCCATGAGCCCGTGGGTGGCCAGGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TTVARLMATSHT*CSMSPWVARVQ Trigger: CTGGACCCTGGCCACCCACGGGCTCATGGAACAGCACGTGTGGGACGTGGCCATTAGCCTGGCCACAGTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 72 bp | GGAAAGCAGGTAGAGAAACAGTACCACGGCGCACAGTaGCTTCACCACCACGCTGGCGCTGGCCAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: GKQVEKQYHGAQ*LHHHAGAGQDG Trigger: GCCATCCTGGCCAGCGCCAGCGTGGTGGTGAAGGCACTGTGCGCCGTGGTACTGTTTCTCTACCTGCTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | GGTCCAGATCCAGAAGTTGGGTGGGAAAAGGTAGCCTaGGGTGACGGCCAGGCAGCCCGTGTCCACAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GPDPEVGWEKVA*GDGQAARVHSE Trigger: TTCGCTGTGGACACGGGCTGCCTGGCCGTCACCCCAGGCTACCTTTTCCCACCCAACTTCTGGATCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | TTGCCTTCTGCGCTCCGCATCTTGAGGGTCTGTGCCTaGGAGGCTGATAGTGATGGACGACGGCGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPSALRILRVCA*EADSDGRRRSH Trigger: GTGGGAGCGCCGTCGTCCATCACTATCAGCCTCCCAGGCACAGACCCTCAAGATGCGGAGCGCAGAAGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CAA 90 bp | CGGACCTGGGGCACTCGCAGAACCACACAGTCTCCCATAGTTTGCTaGAGGGCTACCAGAACACCACCTAGGAAACCCAGGGCGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTWGTRRTTQSPIVC*RATRTPPRKPRAPW Trigger: CCACGGCGCCCTGGGTTTCCTAGGTGGTGTTCTGGTAGCCCTCAAGCAAACTATGGGAGACTGTGTGGTTCTGCGAGTGCCCCAGGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | GCCAGCAACAGCATGGGAACGACGCTGACGCGGACCTaGGGCACTCGCAGAACCACACAGTCTCCCATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASNSMGTTLTRT*GTRRTTQSPIV Trigger: AACTATGGGAGACTGTGTGGTTCTGCGAGTGCCCCAGGTCCGCGTCAGCGTCGTTCCCATGCTGTTGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | GACTGGATTCCGGGACGGTCACCTTCCCTGGGGGCGTaGAAGCTTCTTCTAAGGGCAGAGGACTGTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: DWIPGRSPSLGA*KLLLRAEDCPF Trigger: AAACGGACAGTCCTCTGCCCTTAGAAGAAGCTTCCACGCCCCCAGGGAAGGTGACCGTCCCGGAATCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS TCA 72 bp | GCCTTTAGGGCTAGTTGCCTTCTGCGCTCCGCATCTTaGGGGTCTGTGCCTGGGAGGCTGATAGTGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFRASCLLRSAS*GSVPGRLIVMD Trigger: GTCCATCACTATCAGCCTCCCAGGCACAGACCCTCAAGATGCGGAGCGCAGAAGGCAACTAGCCCTAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 72 bp | CCGTGCACCAAGTTCGCTAGCAGCCCCACCACCGGTTaGAGGATCTCCGGGAAGAAGGTGGCAAAAGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PCTKFASSPTTG*RISGKKVAKAK Trigger: TTTTGCTTTTGCCACCTTCTTCCCGGAGATCCTGCAACCGGTGGTGGGGCTGCTAGCGAACTTGGTGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS GCA 72 bp | GTCTTCTGGCATATCTTTACTTTCACCAGGAGGCCGTaGACCAAGTTCGCTAGCAGCCCCACCACCGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFWHIFTFTRRP*TKFASSPTTGC Trigger: GCAACCGGTGGTGGGGCTGCTAGCGAACTTGGTGCACGGCCTCCTGGTGAAAGTAAAGATATGCCAGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CCA 72 bp | GGCTATGGCGCTGATAGAAGCGAAGATACACCCAACTaGATAGCAGCCCAAAGCCGTAGGAAGCCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GYGADRSEDTPN*IAAQSRRKPGL Trigger: CAGCCCTGGCTTCCTACGGCTTTGGGCTGCTATCCAGTTGGGTGTATCTTCGCTTCTATCAGCGCCATAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS TCA 72 bp | AGCTTCCTCTTCGTCATCATCCATGCTGGGCCAGGCTaGCTGATCCTCCACTCTCTTCAGCCGCTCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFLFVIIHAGPG*LILHSLQPLIE Trigger: CTCAATGAGCGGCTGAAGAGAGTGGAGGATCAGTCAGCCTGGCCCAGCATGGATGATGACGAAGAGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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| CDS CAA 72 bp | GGCACTCGCAGAACCACACAGTCTCCCATAGTTTGCTaGAGGGCTACCAGAACACCACCTAGGAAACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTRRTTQSPIVC*RATRTPPRKPR Trigger: CCTGGGTTTCCTAGGTGGTGTTCTGGTAGCCCTCAAGCAAACTATGGGAGACTGTGTGGTTCTGCGAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010189.3 |
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