Pregenerated sensors for TMEM11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043284Ensembl transcript IDs: ENSMUST00000062677.12, ENSMUST00000155031.2, ENSMUST00000168218.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGTCGGGATCTaGGTCCTGTGGGCCTCGTGGTTCTGCTTCTCGTCCCCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GAAASQRKPSAAVGI*VLWASWFCFSSPSP Trigger: AGGAGAGGGGGACGAGAAGCAGAACCACGAGGCCCACAGGACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR CCA 90 bp | TTGGCTCCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTaGGAGCCACTCCTGGGTTATGGAAATAGACATCTTAGTGTAATG | + |
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Preference number: 1 (lower is better) Translates to: LAPIHTPLLSQTSTA*EPLLGYGNRHLSVM Trigger: CATTACACTAAGATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGGAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR TCA 90 bp | GAGCCACTCCTGGGTTATGGAAATAGACATCTTAGTGTAATGAGCTaGAGAAACCCCTGGCACACCCATGATCTGTTATTTTTGCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: EPLLGYGNRHLSVMS*RNPWHTHDLLFLLK Trigger: TTTAAGCAAAAATAACAGATCATGGGTGTGCCAGGGGTTTCTTCAGCTCATTACACTAAGATGTCTATTTCCATAACCCAGGAGTGGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGAGCTGCTGTCGGGATCTaGGTCCTGTGGGCCTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLSQTSTAWEPLLGYGNRAAVGI*VLWASW Trigger: CCACGAGGCCCACAGGACTCAGATCCCGACAGCAGC...TCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGAGTCCTGTGGGCCTCGTaGTTCTGCTTCTCGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LLSQTSTAWEPLLGYGNRVLWAS*FCFSSP Trigger: GGGGGACGAGAAGCAGAACCACGAGGCCCACAGGAC...TCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATGTCCTGTGGGCCTCGTaGTTCTGCTTCTCGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHVLWAS*FCFSSP Trigger: GGGGGACGAGAAGCAGAACCACGAGGCCCACAGGAC...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR GCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGCACTTTCCCAGGCGCTaGTGCTTCACAGAGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLHFPRR*CFTEKT Trigger: GGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTG...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR CAA 90 bp | CTTAAGACACCCCCACAGCAAGTTCACACCCCTCAGAAAGTAGCATaGGCTCCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKTPPQQVHTPQKVA*APIHTPLLSQTSTA Trigger: GGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGGAGCCAATGCTACTTTCTGAGGGGTGTGAACTTGCTGTGGGGGTGTCTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACACAGAGAAAACCCAGTaGTGCTGTCGGGATCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDTEKTQ*CCRDLS Trigger: ACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGT...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATCTTAGTGTAATGAGCTaGAGAAACCCCTGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHLSVMS*RNPWHT Trigger: GGTGTGCCAGGGGTTTCTTCAGCTCATTACACTAAG...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATACAGAGAAAACCCAGTaGTGCTGTCGGGATCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHTEKTQ*CCRDLS Trigger: ACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGT...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR GCA 72 bp | CCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTaGTGTCGGGATCTGAGTCCTGTGGGCCTCGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: PRRCCFTEKTQC*CRDLSPVGLVV Trigger: AACCACGAGGCCCACAGGACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR GCA 72 bp | TTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTaGTGCTGTCGGGATCTGAGTCCTGTGGGCCTCGTG | + |
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Preference number: 3 (lower is better) Translates to: FPRRCCFTEKTQ*CCRDLSPVGLV Trigger: CACGAGGCCCACAGGACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| 3UTR TCA 72 bp | GCTTCACAGAGAAAACCCAGTGCTGCTGTCGGGATCTaGGTCCTGTGGGCCTCGTGGTTCTGCTTCTCGTCC | + |
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Preference number: 3 (lower is better) Translates to: ASQRKPSAAVGI*VLWASWFCFSS Trigger: GGACGAGAAGCAGAACCACGAGGCCCACAGGACTCAGATCCCGACAGCAGCACTGGGTTTTCTCTGTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACCTGGTGTGGAGGAGGTaGGCGTGTGCAGAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDLVWRR*ACAEAG Trigger: GCCTGCCTCTGCACACGCTCACCTCCTCCACACCAG...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACTGGTGTGGAGGAGGTaGGCGTGTGCAGAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLSQTSTAWEPLLGYGNRLVWRR*ACAEAG Trigger: GCCTGCCTCTGCACACGCTCACCTCCTCCACACCAG...TCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | TCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTGAGGCAGGCAGTACCTaGCAACACGGCCGTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SILHCSVRLPQPGSHSWVEAGST*QHGRLV Trigger: CACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTC...AACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGCCGAACCAGCACCACTaGTGTGGAGGAGGTGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLPNQHH*CGGGER Trigger: ACGCTCACCTCCTCCACACCAGTGGTGCTGGTTCGG...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGTGGGCTTCCAGCGCCTaGTCCAGCTCATACTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLWASSA*SSSYSN Trigger: GTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCA...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR TCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGCAGTGCCAATGGGGTaGAGAGGCAGGCAGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAAAVPMG*RGRQYL Trigger: CAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGC...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATGCAGTGCCAATGGGGTaGAGAGGCAGGCAGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHAVPMG*RGRQYL Trigger: CAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGC...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGTACGGTGATCCAGCGTaGTGTCTCGTCTCCAATTCG | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLYGDPA*CLVSNS Trigger: CGAATTGGAGACGAGACAGCACGCTGGATCACCGTA...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGAGGCAGGCAGTACCTaGCAACACGGCCGTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAAEAGST*QHGRLV Trigger: CACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTC...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | TCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTACTCCACCTGGTACTTaGAGCAAGGGTCAAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: SILHCSVRLPQPGSHSWVTPPGT*SKGQTA Trigger: GGCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGT...AACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CCA 90 bp | TCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTACAATGTACTTGTACTaGGCTTCCAGCGCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SILHCSVRLPQPGSHSWVTMYLY*ASSACS Trigger: GGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGT...AACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACTGGGCTTCCAGCGCCTaGTCCAGCTCATACTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDWASSA*SSSYSN Trigger: GTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCA...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACGTAATCCAGGGGCAGTaGCAATGGGGTGAAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDVIQGQ*QWGEEA Trigger: TGCCTCTTCACCCCATTGGCACTGCCCCTGGATTAC...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGCATCATACTCCACCTaGTACTTGCAGCAAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLASYST*YLQQGS Trigger: TGACCCTTGCTGCAAGTACCAGGTGGAGTATGATGC...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACGTAGCAGTCTGTAGCTaGGAGGCTGACCATTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDVAVCS*EADHSN Trigger: GTTGGAATGGTCAGCCTCTCAGCTACAGACTGCTAC...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTAACACGGCCGTCTTGTaGAGGCAATTGCCTACGGTG | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAANTAVL*RQLPTV Trigger: CACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTT...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGTAATCCAGGGGCAGTaGCAATGGGGTGAAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAAVIQGQ*QWGEEA Trigger: TGCCTCTTCACCCCATTGGCACTGCCCCTGGATTAC...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACACTCCACCTGGTACTTaGAGCAAGGGTCAAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDTPPGT*SKGQTA Trigger: GGCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGT...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGAGGGCTATTGTGTTGTaGAGTCTCTTTCTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLRAIVL*SLFLCR Trigger: CCTGCACAGAAAGAGACTGCACAACACAATAGCCCT...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CCA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGCGTCTCCAATTCGGGTaGGCTCTATCACAATGTACT | + |
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Preference number: 4 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLRLQFG*ALSQCT Trigger: AGTACATTGTGATAGAGCCCACCCGAATTGGAGACG...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTTACGGTGATCCAGCGTaGTGTCTCGTCTCCAATTCG | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAAYGDPA*CLVSNS Trigger: CGAATTGGAGACGAGACAGCACGCTGGATCACCGTA...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTTGCAGTCTCTTTCTGTaGAGGTCGTCCTTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAACSLFL*RSSFRT Trigger: GGTTCGGAAGGACGACCTGCACAGAAAGAGACTGCA...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATTGCAGTCTCTTTCTGTaGAGGTCGTCCTTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHCSLFL*RSSFRT Trigger: GGTTCGGAAGGACGACCTGCACAGAAAGAGACTGCA...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATGCATCATACTCCACCTaGTACTTGCAGCAAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHASYST*YLQQGS Trigger: TGACCCTTGCTGCAAGTACCAGGTGGAGTATGATGC...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR GCA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTAGGGCTATTGTGTTGTaGAGTCTCTTTCTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KPNTFPGAAASQRKPSAARAIVL*SLFLCR Trigger: CCTGCACAGAAAGAGACTGCACAACACAATAGCCCT...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS TCA 90 bp | GTTCTCCCCACTGTAGATTTCGTGCACAATGTAGCAGTCTGTAGCTaGGAGGCTGACCCTCTCTCGGGAGCCGCCGCCGCCCGGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: VLPTVDFVHNVAVCS*EADPLSGAAAARTQ Trigger: CTGGGTCCGGGCGGCGGCGGCTCCCGAGAGAGGGTCAGCCTCTCAGCTACAGACTGCTACATTGTGCACGAAATCTACAGTGGGGAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062677.12 |
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| CDS GCA 90 bp | CACACCAGCGGGCAGGGAGATGTAGTGGGAGTAATCCAGGGGCAGTaGCAATGGGGTGAAGAGGCAGGCAGTACCTGCCAACACGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: HTSGQGDVVGVIQGQ*QWGEEAGSTCQHGR Trigger: ACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGCCCCTGGATTACTCCCACTACATCTCCCTGCCCGCTGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS TCA 90 bp | GCAGGGAGATGTAGTGGGAGTAATCCAGGGGCAGTGCCAATGGGGTaGAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTTGTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AGRCSGSNPGAVPMG*RGRQYLPTRPSCAG Trigger: GCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGCCCCTGGATTACTCCCACTACATCTCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | AATGGGGTGAAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTTGTaGAGGCAATTGCCTACGGTGATCCAGCGTGCTGTCTCGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: NGVKRQAVPANTAVL*RQLPTVIQRAVSSP Trigger: TGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCACCCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS TCA 90 bp | CAGTACCTGCCAACACGGCCGTCTTGTGCAGGCAATTGCCTACGGTaGTCCAGCGTGCTGTCTCGTCTCCAATTCGGGTGGGCTCTATCA | + |
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Preference number: 5 (lower is better) Translates to: QYLPTRPSCAGNCLR*SSVLSRLQFGWALS Trigger: TGATAGAGCCCACCCGAATTGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS TCA 90 bp | TGTGCAGGTCGTCCTTCCGAACCAGCACCACTGGTGTGGAGGAGGTaGGCGTGTGCAGAGGCAGGCGGGACAGTTTATAGGCATCATACT | + |
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Preference number: 5 (lower is better) Translates to: CAGRPSEPAPLVWRR*ACAEAGGTVYRHHT Trigger: AGTATGATGCCTATAAACTGTCCCGCCTGCCTCTGCACACGCTCACCTCCTCCACACCAGTGGTGCTGGTTCGGAAGGACGACCTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | CGGGTGGGCTCTATCACAATGTACTTGTACTGGGCTTCCAGCGCCTaGTCCAGCTCATACTCAAACTGGTCCTGGGCGTTCTCCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: RVGSITMYLYWASSA*SSSYSNWSWAFSPL Trigger: CAGTGGGGAGAACGCCCAGGACCAGTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGAGCCCACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | TACACCAGGGCAGCCAGGGCTATTGTGTTGTGCAGTCTCTTTCTGTaGAGGTCGTCCTTCCGAACCAGCACCACTGGTGTGGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: YTRAARAIVLCSLFL*RSSFRTSTTGVEEV Trigger: CACCTCCTCCACACCAGTGGTGCTGGTTCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACAATAGCCCTGGCTGCCCTGGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | TCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTGGGCAGCCAGGGCTATaGTGTTGTGCAGTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SILHCSVRLPQPGSHSWVGQPGL*CCAVSF Trigger: GAAAGAGACTGCACAACACAATAGCCCTGGCTGCCC...AACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGCCAACACGGCCGTCTaGTGCAGGCAATTGCCTACG | + |
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Preference number: 5 (lower is better) Translates to: KPNTFPGAAASQRKPSAAANTAV*CRQLPT Trigger: CGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGC...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | TCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTTACTCCACCTGGTACTaGCAGCAAGGGTCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: SILHCSVRLPQPGSHSWVYSTWY*QQGSNC Trigger: GCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGTA...AACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGCCAGGGCTATTGTGTaGTGCAGTCTCTTTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLARAIV*CSLFLC Trigger: GCACAGAAAGAGACTGCACAACACAATAGCCCTGGC...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | CAACACGGCCGTCTTGTGCAGGCAATTGCCTACGGTGATCCAGCGTaGTGTCTCGTCTCCAATTCGGGTGGGCTCTATCACAATGTACTT | + |
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Preference number: 5 (lower is better) Translates to: QHGRLVQAIAYGDPA*CLVSNSGGLYHNVL Trigger: AAGTACATTGTGATAGAGCCCACCCGAATTGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | GAGGCAGGCGGGACAGTTTATAGGCATCATACTCCACCTGGTACTTaGAGCAAGGGTCAAACTGCCAGGAGATCCCATAGAGGGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: EAGGTVYRHHTPPGT*SKGQTARRSHRGYS Trigger: GCTGTACCCTCTATGGGATCTCCTGGCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGTATGATGCCTATAAACTGTCCCGCCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS CCA 90 bp | GTCTCGTCTCCAATTCGGGTGGGCTCTATCACAATGTACTTGTACTaGGCTTCCAGCGCCTGCTCCAGCTCATACTCAAACTGGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSSPIRVGSITMYLY*ASSACSSSYSNWSW Trigger: CCAGGACCAGTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGAGCCCACCCGAATTGGAGACGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | CCTATCCATACTCCACTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGTCTATCACAATGTACTaGTACTGGGCTTCCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PIHTPLLSQTSTAWEPLLSITMY*YWASSA Trigger: GGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGA...CAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAGTGGAGTATGGATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGAGTCTTGTGCAGGCAATaGCCTACGGTGATCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: LLSQTSTAWEPLLGYGNRVLCRQ*PTVIQR Trigger: ACGCTGGATCACCGTAGGCAATTGCCTGCACAAGAC...TCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACGTCTTGTGCAGGCAATaGCCTACGGTGATCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: CSVRLPQPGSHSWVMEIDVLCRQ*PTVIQR Trigger: ACGCTGGATCACCGTAGGCAATTGCCTGCACAAGAC...GTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS GCA 90 bp | ACCTTCTTTACACAGTACACCAGGGCAGCCAGGGCTATTGTGTTGTaGAGTCTCTTTCTGTGCAGGTCGTCCTTCCGAACCAGCACCACT | + |
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Preference number: 5 (lower is better) Translates to: TFFTQYTRAARAIVL*SLFLCRSSFRTSTT Trigger: AGTGGTGCTGGTTCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACAATAGCCCTGGCTGCCCTGGTGTACTGTGTAAAGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTCAGACTTCCACAGCCTGGGAGCCACTCCTGGGTTATGGAAATAGACATGGGCAGCCAGGGCTATaGTGTTGTGCAGTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LSQTSTAWEPLLGYGNRHGQPGL*CCAVSF Trigger: GAAAGAGACTGCACAACACAATAGCCCTGGCTGCCC...ATGTCTATTTCCATAACCCAGGAGTGGCTCCCAGGCTGTGGAAGTCTGACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTTACTCCACCTGGTACTaGCAGCAAGGGTCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: KPNTFPGAAASQRKPSAAYSTWY*QQGSNC Trigger: GCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGTA...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTGCCAGGGCTATTGTGTaGTGCAGTCTCTTTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: KPNTFPGAAASQRKPSAAARAIV*CSLFLC Trigger: GCACAGAAAGAGACTGCACAACACAATAGCCCTGGC...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS-3UTR CAA 90 bp | AAACCAAACACTTTCCCAGGCGCTGCTGCTTCACAGAGAAAACCCAGTGCTGCTTCTATCACAATGTACTaGTACTGGGCTTCCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: KPNTFPGAAASQRKPSAASITMY*YWASSA Trigger: GGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGA...AGCAGCACTGGGTTTTCTCTGTGAAGCAGCAGCGCCTGGGAAAGTGTTTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS TCA 72 bp | CGTCCTTCCGAACCAGCACCACTGGTGTGGAGGAGGTaGGCGTGTGCAGAGGCAGGCGGGACAGTTTATAGG | + |
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Preference number: 6 (lower is better) Translates to: RPSEPAPLVWRR*ACAEAGGTVYR Trigger: CCTATAAACTGTCCCGCCTGCCTCTGCACACGCTCACCTCCTCCACACCAGTGGTGCTGGTTCGGAAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | GGGCAGTGCCAATGGGGTGAAGAGGCAGGCAGTACCTaGCAACACGGCCGTCTTGTGCAGGCAATTGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: GQCQWGEEAGST*QHGRLVQAIAY Trigger: GTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 90 bp | GCCAATGGGGTGAAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTaGTGCAGGCAATTGCCTACGGTGATCCAGCGTGCTGTCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: ANGVKRQAVPANTAV*CRQLPTVIQRAVSS Trigger: AGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCACCCCATTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS TCA 72 bp | CCAACACGGCCGTCTTGTGCAGGCAATTGCCTACGGTaGTCCAGCGTGCTGTCTCGTCTCCAATTCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PTRPSCAGNCLR*SSVLSRLQFGW Trigger: CCACCCGAATTGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | AAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTTGTaGAGGCAATTGCCTACGGTGATCCAGCGTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KRQAVPANTAVL*RQLPTVIQRAV Trigger: GACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | GGGCAGGGAGATGTAGTGGGAGTAATCCAGGGGCAGTaGCAATGGGGTGAAGAGGCAGGCAGTACCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GQGDVVGVIQGQ*QWGEEAGSTCQ Trigger: TTGGCAGGTACTGCCTGCCTCTTCACCCCATTGGCACTGCCCCTGGATTACTCCCACTACATCTCCCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 72 bp | GCAGTACCTGCCAACACGGCCGTCTTGTGCAGGCAATaGCCTACGGTGATCCAGCGTGCTGTCTCGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AVPANTAVLCRQ*PTVIQRAVSSP Trigger: TGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 72 bp | GTGAAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTaGTGCAGGCAATTGCCTACGGTGATCCAGCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VKRQAVPANTAV*CRQLPTVIQRA Trigger: AGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTTCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 90 bp | AAGAGGCAGGCAGTACCTGCCAACACGGCCGTCTTGTGCAGGCAATaGCCTACGGTGATCCAGCGTGCTGTCTCGTCTCCAATTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: KRQAVPANTAVLCRQ*PTVIQRAVSSPIRV Trigger: CACCCGAATTGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACGGCCGTGTTGGCAGGTACTGCCTGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | CGTCTTGTGCAGGCAATTGCCTACGGTGATCCAGCGTaGTGTCTCGTCTCCAATTCGGGTGGGCTCTATCAC | + |
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Preference number: 6 (lower is better) Translates to: RLVQAIAYGDPA*CLVSNSGGLYH Trigger: GTGATAGAGCCCACCCGAATTGGAGACGAGACAGCACGCTGGATCACCGTAGGCAATTGCCTGCACAAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | GCAGCCAGGGCTATTGTGTTGTGCAGTCTCTTTCTGTaGAGGTCGTCCTTCCGAACCAGCACCACTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: AARAIVLCSLFL*RSSFRTSTTGV Trigger: CACACCAGTGGTGCTGGTTCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACAATAGCCCTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS CAA 90 bp | CGTGCTGTCTCGTCTCCAATTCGGGTGGGCTCTATCACAATGTACTaGTACTGGGCTTCCAGCGCCTGCTCCAGCTCATACTCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RAVSSPIRVGSITMY*YWASSACSSSYSNW Trigger: CCAGTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGAGCCCACCCGAATTGGAGACGAGACAGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 72 bp | TCGTCTCCAATTCGGGTGGGCTCTATCACAATGTACTaGTACTGGGCTTCCAGCGCCTGCTCCAGCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SSPIRVGSITMY*YWASSACSSSY Trigger: GTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGAGCCCACCCGAATTGGAGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | TCTATCACAATGTACTTGTACTGGGCTTCCAGCGCCTaGTCCAGCTCATACTCAAACTGGTCCTGGGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SITMYLYWASSA*SSSYSNWSWAF Trigger: GAACGCCCAGGACCAGTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CCA 72 bp | CCAATTCGGGTGGGCTCTATCACAATGTACTTGTACTaGGCTTCCAGCGCCTGCTCCAGCTCATACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PIRVGSITMYLY*ASSACSSSYSN Trigger: GTTTGAGTATGAGCTGGAGCAGGCGCTGGAAGCCCAGTACAAGTACATTGTGATAGAGCCCACCCGAATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062677.12 ENSMUST00000155031.2 ENSMUST00000168218.8 |
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| CDS CAA 72 bp | TTTACACAGTACACCAGGGCAGCCAGGGCTATTGTGTaGTGCAGTCTCTTTCTGTGCAGGTCGTCCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: FTQYTRAARAIV*CSLFLCRSSFR Trigger: TCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACAATAGCCCTGGCTGCCCTGGTGTACTGTGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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| CDS GCA 72 bp | GGGACAGTTTATAGGCATCATACTCCACCTGGTACTTaGAGCAAGGGTCAAACTGCCAGGAGATCCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: GTVYRHHTPPGT*SKGQTARRSHR Trigger: TCTATGGGATCTCCTGGCAGTTTGACCCTTGCTGCAAGTACCAGGTGGAGTATGATGCCTATAAACTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062677.12 ENSMUST00000168218.8 |
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