Pregenerated sensors for TMEM109 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034659Ensembl transcript IDs: ENSMUST00000038128.15, ENSMUST00000128835.8, ENSMUST00000133303.8, ENSMUST00000144681.2, ENSMUST00000147699.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGGGAGGCAGGCTGGGAGCACAGAAGGGCAGGGAGCCATCACTTaGCTGAGCACCGGCAGAGGACAGGTTCTCTCCTCTCAGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: WGRQAGSTEGQGAIT*LSTGRGQVLSSQPG Trigger: CCCTGGCTGAGAGGAGAGAACCTGTCCTCTGCCGGTGCTCAGTCAAGTGATGGCTCCCTGCCCTTCTGTGCTCCCAGCCTGCCTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CCA 90 bp | GGAAGCAGCAGGTTAATCATCACGGAGATCAGCGGGCAGTGGTGCTaGCTGAGAGCAGAAGCCAGGGCTGAGGGCTCCAACCTGCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: GSSRLIITEISGQWC*LRAEARAEGSNLPW Trigger: CCAGGGCAGGTTGGAGCCCTCAGCCCTGGCTTCTGCTCTCAGCCAGCACCACTGCCCGCTGATCTCCGTGATGATTAACCTGCTGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 90 bp | CGGACACAAGGCAAGGAAAGGGCAAGGGGGCTGCAAGGAGGTCCGTaGGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RTQGKERARGLQGGP*DPEAAQLFGTVRVS Trigger: AGACACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGCAGCCCCCTTGCCCTTTCCTTGCCTTGTGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CCA 90 bp | GCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCTACTaGGACACAACACTGACCAACGCTTGCTTCTGGATGGCAGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: ALQNRSGQSRALPSY*DTTLTNACFWMAES Trigger: ACTCTCTGCCATCCAGAAGCAAGCGTTGGTCAGTGTTGTGTCCCAGTAGCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR GCA 90 bp | CCCCCTTCATCCTTATCTCCAATCTCCTACCCCTGCCCATTGCAGTaGAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGATGGTA | + |
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Preference number: 1 (lower is better) Translates to: PPSSLSPISYPCPLQ*NEEDREGRKGLGMV Trigger: TACCATCCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGGAGATAAGGATGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR GCA 90 bp | TTCCTCCCCCTTCATCCTTATCTCCAATCTCCTACCCCTGCCCATTaGAGTGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: FLPLHPYLQSPTPAH*SAMRKTERAARDLG Trigger: TCCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGGAGATAAGGATGAAGGGGGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 90 bp | CGTTGCTTTGTTTGCTGGAGTGGGGATTCTGCAAGGGGCTCACTCTaGCCACGAAGTAGCCACAGCACACTTTCCCACATTCAGTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: RCFVCWSGDSARGSL*PRSSHSTLSHIQCG Trigger: GCCACACTGAATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR GCA 90 bp | AGGGTGCTGCTGACTCCTGCTAAGGCACTTGTAACAGAGCATAGATaGACAGGCCTCCAGGGACCCTTTCCTCCCCCTTCATCCTTATCT | + |
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Preference number: 1 (lower is better) Translates to: RVLLTPAKALVTEHR*TGLQGPFPPPSSLS Trigger: AGATAAGGATGAAGGGGGAGGAAAGGGTCCCTGGAGGCCTGTGCATCTATGCTCTGTTACAAGTGCCTTAGCAGGAGTCAGCAGCACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 90 bp | TTCATCCTTATCTCCAATCTCCTACCCCTGCCCATTGCAGTGCAATaGGGAAGACAGAGAGGGCCGCAAGGGACTTGGGATGGTAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: FILISNLLPLPIAVQ*GRQRGPQGTWDGSV Trigger: CACACTACCATCCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGGAGATAAGGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CCA 90 bp | GAATCCCAATCTTCCCGACTGGGACTCCCGGAAGACTACTGGAAATaGAGCTTCATTTGTTATATGAGAACAGTGTGTGTGCCTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: ESQSSRLGLPEDYWK*SFICYMRTVCVPPQ Trigger: CTGTGGAGGCACACACACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR TCA 90 bp | TGGGACTCCCGGAAGACTACTGGAAATGGAGCTTCATTTGTTATATaGGAACAGTGTGTGTGCCTCCACAGGCTGTGGTTAACCAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: WDSRKTTGNGASFVI*EQCVCLHRLWLTKE Trigger: CTCTTTGGTTAACCACAGCCTGTGGAGGCACACACACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR CCA 90 bp | TCCTTACAGGCCTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTaGGACTCCCGGAAGACTACTGGAAATGGAGCTTCATTTGTTATA | + |
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Preference number: 1 (lower is better) Translates to: SLQAWETGLNPNLPD*DSRKTTGNGASFVI Trigger: TATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGCCTGTAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCCTGGGGGAGGCAGGCTaGGAGCACAGAAGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSLLALQNRSGQSRALPSLGEAG*EHRRAG Trigger: CCCTGCCCTTCTGTGCTCCCAGCCTGCCTCCCCCAG...GCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCCCATTGCAGTGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGAGCAGAAGCCAGGGCTaGGGGCTCCAACCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PCPLQCNEEDREGRKGLGSRSQG*GLQPAL Trigger: CAGGGCAGGTTGGAGCCCTCAGCCCTGGCTTCTGCT...CCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGAAAGGGCAAGGGGGCTaGAAGGAGGTCCGTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: RLTPSPAEQIRAKPCPSQKGQGG*KEVRET Trigger: GGTCTCACGGACCTCCTTGCAGCCCCCTTGCCCTTT...CTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | GGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCTTCCCACATTCAGTGTaGCAAGGGGCACCTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSLLALQNRSGQSRALPSFPHSV*QGAPGG Trigger: CCCTCCAGGTGCCCCTTGCCACACTGAATGTGGGAA...GCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCTGGCATGGGTCATCTCCCTCCACCAGGGACCTAAAGGCCAAGGCCAACCCATTGCAGTGCAATaGGGAAGACAGAGAGGGCCG | + |
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Preference number: 2 (lower is better) Translates to: LDLAWVISLHQGPKGQGQPIAVQ*GRQRGP Trigger: CGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGG...TTGGCCTTGGCCTTTAGGTCCCTGGTGGAGGGAGATGACCCATGCCAGGTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGATTCTGAGGGCTCCAACCTaGCCTGGGGGAGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RQQVLLPFSRSLKPSREILRAPT*PGGGRL Trigger: CAGCCTGCCTCCCCCAGGGCAGGTTGGAGCCCTCAG...AATCTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | GCAAGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGAGCGGGCAGTGGTGCTaGCTGAGAGCAGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ARQQVLLPFSRSLKPSRESGQWC*LRAEAR Trigger: CCTGGCTTCTGCTCTCAGCCAGCACCACTGCCCGCT...CTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGATGGTAGTGTGGCTGATCAGCGGGCAGTGGTaGTGGCTGAGAGCAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CNEEDREGRKGLGMVVWLISGQW*WLRAEA Trigger: GGCTTCTGCTCTCAGCCAGCACCACTGCCCGCTGAT...CAGCCACACTACCATCCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGATTCTGCAAGGGGCTCACTCTGACCACGAAGTAGCCACAGCACACTTTGGGCCGCAAGGGACTTaGGATGGTAGTGTGGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VGILQGAHSDHEVATAHFGPQGT*DGSVAG Trigger: CCCAGCCACACTACCATCCCAAGTCCCTTGCGGCCC...AAAGTGTGCTGTGGCTACTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGACCTGGCATGGGTCATCTCCCTCCACCAGGGACCTAAAGGCCAAGGCCAACCCTGCCCATTGCAGTaGAATGAGGAAGACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDLAWVISLHQGPKGQGQPCPLQ*NEEDRE Trigger: CTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGG...TTGGCCTTGGCCTTTAGGTCCCTGGTGGAGGGAGATGACCCATGCCAGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | GACCACGAAGTAGCCACAGCACACTTTCCCACATTCAGTGTGGCAAGGGGCACCGAGATCAGCGGGCAGTaGTGCTGGCTGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: DHEVATAHFPTFSVARGTEISGQ*CWLRAE Trigger: TTCTGCTCTCAGCCAGCACCACTGCCCGCTGATCTC...GGTGCCCCTTGCCACACTGAATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCTTTGTTTGCTGGAGTaGGGATTCTGCAAGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RLTPSPAEQIRAKPCPSQLCLLE*GFCKGL Trigger: GAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAG...CTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CAA 90 bp | ACCCTCAAGGGAGATTCGACAATCCCAGCAGGGCCGTTGCTTTGTTaGCTGGAGTGGGGATTCTGCAAGGGGCTCACTCTGACCACGAAG | + |
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Preference number: 2 (lower is better) Translates to: TLKGDSTIPAGPLLC*LEWGFCKGLTLTTK Trigger: CTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGATTGTCGAATCTCCCTTGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CAA 90 bp | GTCCCTGAAACCCTCAAGGGAGATTCGACAATCCCAGCAGGGCCGTaGCTTTGTTTGCTGGAGTGGGGATTCTGCAAGGGGCTCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: VPETLKGDSTIPAGP*LCLLEWGFCKGLTL Trigger: CAGAGTGAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGATTGTCGAATCTCCCTTGAGGGTTTCAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CAA 90 bp | TTTCCTCCCCCTTCATCCTTATCTCCAATCTCCTACCCCTGCCCATaGCAGTGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FPPPSSLSPISYPCP*QCNEEDREGRKGLG Trigger: CCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGGAGATAAGGATGAAGGGGGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CAA 90 bp | AAGCCGTGCCCTTCCCAGCTACTGGGACACAACACTGACCAACGCTaGCTTCTGGATGGCAGAGAGTGGACAGGGGTAAAACTGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: KPCPSQLLGHNTDQR*LLDGREWTGVKLQD Trigger: GTCTTGCAGTTTTACCCCTGTCCACTCTCTGCCATCCAGAAGCAAGCGTTGGTCAGTGTTGTGTCCCAGTAGCTGGGAAGGGCACGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CCA 90 bp | GCAAGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGCTTGGGATGGTAGTGTaGCTGGGAGCAGGAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ARQQVLLPFSRSLKPSRELGMVV*LGAGRK Trigger: TTTTCTTCCTGCTCCCAGCCACACTACCATCCCAAG...CTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGATTGGCCGTTGCTTTGTTTaGTGGAGTGGGGATTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RQQVLLPFSRSLKPSREIGRCFV*WSGDSA Trigger: TGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCC...AATCTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGAGGGGCAAGAAAGAGTGAAGCAGAAGGGACCCAACAGCCATAATTACGCTTCATTTGTTATATaGGAACAGTGTGTGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GKEGQERVKQKGPNSHNYASFVI*EQCVCL Trigger: GAGGCACACACACTGTTCTCATATAACAAATGAAGC...GTAATTATGGCTGTTGGGTCCCTTCTGCTTCACTCTTTCTTGCCCCTCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACTCCCGGAAGACTACTGGAAATGGAGCTTCATTTGTTATATGAGAACAGTCTTTTACTGTACCTCTaGGGACATCAGCAAACATCT | + |
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Preference number: 2 (lower is better) Translates to: GTPGRLLEMELHLLYENSLLLYL*GHQQTS Trigger: AGATGTTTGCTGATGTCCTCAGAGGTACAGTAAAAG...ACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR TCA 72 bp | GGCAAGGAAAGGGCAAGGGGGCTGCAAGGAGGTCCGTaGGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTG | + |
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Preference number: 3 (lower is better) Translates to: GKERARGLQGGP*DPEAAQLFGTV Trigger: CACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGCAGCCCCCTTGCCCTTTCCTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 72 bp | TCCTCTCAGCCAGGGGCTAGCGCAGGGGTAAAGGTGTaGAGGTTCCGGACACAAGGCAAGGAAAGGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SSQPGASAGVKV*RFRTQGKERAR Trigger: CCTTGCCCTTTCCTTGCCTTGTGTCCGGAACCTTCACACCTTTACCCCTGCGCTAGCCCCTGGCTGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CAA 90 bp | TGGGACACAACACTGACCAACGCTTGCTTCTGGATGGCAGAGAGTGGACAGGGGATCCCAGCAGGGCCGTaGCTTTGTTTGCTGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: WDTTLTNACFWMAESGQGIPAGP*LCLLEW Trigger: CCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGAT...CCCCTGTCCACTCTCTGCCATCCAGAAGCAAGCGTTGGTCAGTGTTGTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR GCA 72 bp | CCCTCAAGGGAGATTCGACAATCCCAGCAGGGCCGTTaGTTTGTTTGCTGGAGTGGGGATTCTGCAAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PSREIRQSQQGR*FVCWSGDSARG Trigger: GCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGATTGTCGAATCTCCCTTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR-3UTR CAA 90 bp | GACCACGAAGTAGCCACAGCACACTTTCCCACATTCAGTGTGGCAAGGGGCACCTCCTACCCCTGCCCATaGCAGTGCAATGAGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: DHEVATAHFPTFSVARGTSYPCP*QCNEED Trigger: GTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGA...GGTGCCCCTTGCCACACTGAATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR GCA 72 bp | ACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTaGCCTTCCCAGCTACTGGGACACAACACTGACCAA | + |
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Preference number: 3 (lower is better) Translates to: TPSPAEQIRAKP*PSQLLGHNTDQ Trigger: TTGGTCAGTGTTGTGTCCCAGTAGCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 72 bp | ATCTCCAATCTCCTACCCCTGCCCATTGCAGTGCAATaGGGAAGACAGAGAGGGCCGCAAGGGACTTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: ISNLLPLPIAVQ*GRQRGPQGTWD Trigger: ATCCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 72 bp | GGCATAGCCCATCCTTACAGGCCTGGGAAACAGGTTTaGATCCCAATCTTCCCGACTGGGACTCCCGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: GIAHPYRPGKQV*IPIFPTGTPGR Trigger: TCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGCCTGTAAGGATGGGCTATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR CCA 72 bp | AACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCTACTaGGACACAACACTGACCAACGCTTGCTTCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: NRSGQSRALPSY*DTTLTNACFWM Trigger: CATCCAGAAGCAAGCGTTGGTCAGTGTTGTGTCCCAGTAGCTGGGAAGGGCACGGCTTTGCCCTGATCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR TCA 72 bp | GTTTGCTGGAGTGGGGATTCTGCAAGGGGCTCACTCTaGCCACGAAGTAGCCACAGCACACTTTCCCACATT | + |
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Preference number: 3 (lower is better) Translates to: VCWSGDSARGSL*PRSSHSTLSHI Trigger: AATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCACTCCAGCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| 3UTR CCA 72 bp | GCCTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTaGGACTCCCGGAAGACTACTGGAAATGGAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: AWETGLNPNLPD*DSRKTTGNGAS Trigger: TGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGCCTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTGGGACTCCCGGAAGGAGACAGTACATCTTaGCACAATGTCCAACACAAG | + |
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Preference number: 3 (lower is better) Translates to: TGLGNRFESQSSRLGLPEGDSTS*HNVQHK Trigger: CTTGTGTTGGACATTGTGCAAAGATGTACTGTCTCC...TTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR CCA 72 bp | TCCCAATCTTCCCGACTGGGACTCCCGGAAGACTACTaGAAATGGAGCTTCATTTGTTATATGAGAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: SQSSRLGLPEDY*KWSFICYMRTV Trigger: CACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR TCA 72 bp | CGGAAGACTACTGGAAATGGAGCTTCATTTGTTATATaGGAACAGTGTGTGTGCCTCCACAGGCTGTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: RKTTGNGASFVI*EQCVCLHRLWL Trigger: TAACCACAGCCTGTGGAGGCACACACACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
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| 3UTR TCA 72 bp | CCACCAAGCGCTGATAAAAACATATCACTGCAGCCATaGTTCCACATCAAACCTTCAGTAAGAATAGGCATT | + |
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Preference number: 3 (lower is better) Translates to: PPSADKNISLQP*FHIKPSVRIGI Trigger: AATGCCTATTCTTACTGAAGGTTTGATGTGGAATCATGGCTGCAGTGATATGTTTTTATCAGCGCTTGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
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| CDS-3UTR TCA 90 bp | CCCTGCCCATTGCAGTGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGAGCTCCTGGAGCCAGTaGGCCGGCTCAGCAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCPLQCNEEDREGRKGLGSSWSQ*AGSARQ Trigger: TTGCCTTGCTGAGCCGGCTCACTGGCTCCAGGAGCT...CCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | CCCTGCCCATTGCAGTGCAATGAGGAAGACAGAGAGGGCCGCAAGGGACTTGGGTGCTCCTGGGCATCTTaGCTGCTCGCCTCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCPLQCNEEDREGRKGLGCSWAS*LLASAS Trigger: GGAGGCAGAGGCGAGCAGCCAAGATGCCCAGGAGCA...CCCAAGTCCCTTGCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | AGCACCGGCAGAGGACAGGTTCTCTCCTCTCAGCCAGGGGCTAGCGCAGGGGTACTTCTTCCATGCTCCTaGGCATCTTGGCTGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STGRGQVLSSQPGASAGVLLPCS*ASWLLA Trigger: GGCGAGCAGCCAAGATGCCCAGGAGCATGGAAGAAG...TACCCCTGCGCTAGCCCCTGGCTGAGAGGAGAGAACCTGTCCTCTGCCGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGGTCCGTGAGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTCCAGCCCTCTCACCTTaGCTTCCAGGTGGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARRSVRPRSSSALWYGEGPALSP*LPGGSL Trigger: CAGGGAGCCACCTGGAAGCCAAGGTGAGAGGGCTGG...ACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCTTGGCTGCTCGCCTCTaGCTCCCTCTAAGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLALQNRSGQSRALPSLAARL*LPLSSS Trigger: AGAAGAGCTTAGAGGGAGGCAGAGGCGAGCAGCCAA...GCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR GCA 90 bp | AGGTCCGTGAGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTGTCTCTCCTGGGCATCTTGGCTaGTCGCCTCTGCCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVRPRSSSALWYGEGVSPGHLG*SPLPPS Trigger: AGAGGGAGGCAGAGGCGAGCAGCCAAGATGCCCAGG...AGAGACACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | CCAATCTCCTACCCCTGCCCATTGCAGTGCAATGAGGAAGACAGAGAGGGCCGCGAGGCAAACTCTCGATaGGACTGGGCTGATGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PISYPCPLQCNEEDREGREANSR*DWADAE Trigger: CTCCGCATCAGCCCAGTCTCATCGAGAGTTTGCCTC...GCGGCCCTCTCTGTCTTCCTCATTGCACTGCAATGGGCAGGGGTAGGAGATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | CTTGCTTCTGGATGGCAGAGAGTGGACAGGGGTAAAACTGCAAGACAGCAGGTCTTCCAGGTGGCTCCCTaGGCTCCTGGAGCCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LASGWQRVDRGKTARQQVFQVAP*APGASE Trigger: CTCACTGGCTCCAGGAGCTCAGGGAGCCACCTGGAA...GACCTGCTGTCTTGCAGTTTTACCCCTGTCCACTCTCTGCCATCCAGAAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR GCA 90 bp | GGCTCACTCCTAGCCCTGCAGAACAGATCAGGGCAAAGCCGTGCCCTTCCCAGCATGGCCCACATCACCTaGAACAGGGTCTCTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLALQNRSGQSRALPSMAHIT*NRVSEI Trigger: GATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCAT...GCTGGGAAGGGCACGGCTTTGCCCTGATCTGTTCTGCAGGGCTAGGAGTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTGGCATGGGTCATCTCCCTCCACCAGGGACCTAAAGGCCAAGGCCAAAGAAGGGTCTGGACTTaGCTAGGGCTGAGCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLAWVISLHQGPKGQGQRRVWT*LGLSFK Trigger: CTTGAAGCTCAGCCCTAGCCAAGTCCAGACCCTTCT...TTGGCCTTGGCCTTTAGGTCCCTGGTGGAGGGAGATGACCCATGCCAGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | GTGGGGATTCTGCAAGGGGCTCACTCTGACCACGAAGTAGCCACAGCACACTTTACCTTGGCTTCCAGGTaGCTCCCTGAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGILQGAHSDHEVATAHFTLASR*LPELLE Trigger: CTCCAGGAGCTCAGGGAGCCACCTGGAAGCCAAGGT...AAAGTGTGCTGTGGCTACTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | GTGGGGATTCTGCAAGGGGCTCACTCTGACCACGAAGTAGCCACAGCACACTTTGCTTCAAGCCCTGGGTaGGTTGTTCACCATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGILQGAHSDHEVATAHFASSPG*VVHHPA Trigger: GGCTGGATGGTGAACAACTCACCCAGGGCTTGAAGC...AAAGTGTGCTGTGGCTACTTCGTGGTCAGAGTGAGCCCCTTGCAGAATCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | GACCACGAAGTAGCCACAGCACACTTTCCCACATTCAGTGTGGCAAGGGGCACCCACAGTAGAAGGGTCTaGACTTGGCTAGGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHEVATAHFPTFSVARGTHSRRV*TWLGLS Trigger: GCTCAGCCCTAGCCAAGTCCAGACCCTTCTACTGTG...GGTGCCCCTTGCCACACTGAATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| 3UTR CAA 72 bp | GGAGATTCGACAATCCCAGCAGGGCCGTTGCTTTGTTaGCTGGAGTGGGGATTCTGCAAGGGGCTCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDSTIPAGPLLC*LEWGFCKGLTL Trigger: CAGAGTGAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGATTGTCGAATCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| 3UTR CAA 72 bp | CAAGGGAGATTCGACAATCCCAGCAGGGCCGTTGCTTaGTTTGCTGGAGTGGGGATTCTGCAAGGGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGRFDNPSRAVA*FAGVGILQGAH Trigger: GTGAGCCCCTTGCAGAATCCCCACTCCAGCAAACAAAGCAACGGCCCTGCTGGGATTGTCGAATCTCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAGGTCCGTGAGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTCCATCAGGACAGCTTTaGGCAGATGTCTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ARRSVRPRSSSALWYGEGPSGQL*ADVCSI Trigger: TATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGG...ACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | CTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTGGGACTCCCGGAAGACTACGAGGCAAACTCTCGATaGGACTGGGCTGATGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGNRFESQSSRLGLPEDYEANSR*DWADAE Trigger: CTCCGCATCAGCCCAGTCTCATCGAGAGTTTGCCTC...GTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGATTACAGCAACCAGTAGATaGCCAGTGCTGCTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQQVLLPFSRSLKPSREITATSR*PVLLLP Trigger: GGGGAGCAGCAGCACTGGTCATCTACTGGTTGCTGT...AATCTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR GCA 90 bp | GCAAGGAGGTCCGTGAGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTGTCTCTGAAATCACATaGATGGTCTCTGGCCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARRSVRPRSSSALWYGEGVSEIT*MVSGPS Trigger: GCTAGGGCCAGAGACCATGCATGTGATTTCAGAGAC...ACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| 3UTR CAA 72 bp | AGGCATAGCCCATCCTTACAGGCCTGGGAAACAGGTTaGAATCCCAATCTTCCCGACTGGGACTCCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHSPSLQAWETG*NPNLPDWDSRK Trigger: CTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGCCTGTAAGGATGGGCTATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGAGATGGCTGATGAGATaGCCCACATCACCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ARQQVLLPFSRSLKPSRERWLMR*PTSPAT Trigger: TGTTGCAGGTGATGTGGGCCATCTCATCAGCCATCT...CTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR GCA 90 bp | TTACAGGCCTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTGGGACTCCCGGGTCTCTGAAATCACATaGATGGTCTCTGGCCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQAWETGLNPNLPDWDSRVSEIT*MVSGPS Trigger: GCTAGGGCCAGAGACCATGCATGTGATTTCAGAGAC...CCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAGGCCTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTCTGGATGGCAGAGAGTGGACAGGGGTAAAACTGCAAGACAGCAGGTCCTGAAATCACATGCATaGTCTCTGGCCCTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LASGWQRVDRGKTARQQVLKSHA*SLALAR Trigger: CCTGGCTAGGGCCAGAGACCATGCATGTGATTTCAG...GACCTGCTGTCTTGCAGTTTTACCCCTGTCCACTCTCTGCCATCCAGAAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | AGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGATTCTGAGCTTCAAGCCCTaGGTGAGTTGTTCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RQQVLLPFSRSLKPSREILSFKP*VSCSPS Trigger: GGATGGTGAACAACTCACCCAGGGCTTGAAGCTCAG...AATCTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAGGTCCTCCTGCCCTTTTCAAGGTCCCTGAAACCCTCAAGGGAGATTGTCTCCTTCTTCTGTTaGCCAGGTGAGGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQQVLLPFSRSLKPSREIVSFFC*PGEANS Trigger: AGAGTTTGCCTCACCTGGTCAACAGAAGAAGGAGAC...AATCTCCCTTGAGGGTTTCAGGGACCTTGAAAAGGGCAGGAGGACCTGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS-3UTR CCA 90 bp | CTGGGAAACAGGTTTGAATCCCAATCTTCCCGACTGGGACTCCCGGAAGACTACAGATGGCTGATGAGATaGCCCACATCACCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LGNRFESQSSRLGLPEDYRWLMR*PTSPAT Trigger: TGTTGCAGGTGATGTGGGCCATCTCATCAGCCATCT...GTAGTCTTCCGGGAGTCCCAGTCGGGAAGATTGGGATTCAAACCTGTTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCCTCCACAGGCTGTGGTTAACCAAAGAGGAGACAGTACATCTTTGCACCTGAAATCACATGCATaGTCTCTGGCCCTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVPPQAVVNQRGDSTSLHLKSHA*SLALAR Trigger: CCTGGCTAGGGCCAGAGACCATGCATGTGATTTCAG...GTGCAAAGATGTACTGTCTCCTCTTTGGTTAACCACAGCCTGTGGAGGCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCCTCCACAGGCTGTGGTTAACCAAAGAGGAGACAGTACATCTTTGCACCCATCAGGACAGCTTTaGGCAGATGTCTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CVPPQAVVNQRGDSTSLHPSGQL*ADVCSI Trigger: TATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGG...GTGCAAAGATGTACTGTCTCCTCTTTGGTTAACCACAGCCTGTGGAGGCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| 3UTR CAA 72 bp | GGGACTCCCGGAAGACTACTGGAAATGGAGCTTCATTaGTTATATGAGAACAGTGTGTGTGCCTCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTPGRLLEMELH*LYENSVCASTG Trigger: GCCTGTGGAGGCACACACACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS-3UTR GCA 90 bp | GGGACTCCCGGAAGACTACTGGAAATGGAGCTTCATTTGTTATATGAGAACAGTATGGCCCACATCACCTaGAACAGGGTCTCTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GTPGRLLEMELHLLYENSMAHIT*NRVSEI Trigger: GATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCAT...ACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCCGGGAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS TCA 90 bp | CGGAGTGGACGAGGAAAAGGGCCACGAGGACCATCAGGACAGCTTTaGGCAGATGTCTGCTCCATAACGGAGTGCTGTGTGCGCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGRGKGPRGPSGQL*ADVCSITECCVRLP Trigger: TGGCAGGCGCACACAGCACTCCGTTATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGTCCTCGTGGCCCTTTTCCTCGTCCACTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038128.15 ENSMUST00000128835.8 ENSMUST00000133303.8 ENSMUST00000144681.2 ENSMUST00000147699.2 |
||
| CDS TCA 90 bp | GCAAGGCCAAGACCAAGCCTAGGAGCAGGGACAGCAACCAGTAGATaGCCAGTGCTGCTGCTCCCCACAGTAGAAGGGTCTGGACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARPRPSLGAGTATSR*PVLLLPTVEGSGLG Trigger: GCCAAGTCCAGACCCTTCTACTGTGGGGAGCAGCAGCACTGGTCATCTACTGGTTGCTGTCCCTGCTCCTAGGCTTGGTCTTGGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 |
||
| CDS TCA 90 bp | CTCTCACCTTGGCTTCCAGGTGGCTCCCTGAGCTCCTGGAGCCAGTaGGCCGGCTCAGCAAGGCAAAGAGAGTTAACAAGGCCAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPWLPGGSLSSWSQ*AGSARQRELTRPRA Trigger: TGCTCTTGGCCTTGTTAACTCTCTTTGCCTTGCTGAGCCGGCTCACTGGCTCCAGGAGCTCAGGGAGCCACCTGGAAGCCAAGGTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS CCA 90 bp | CACAGTAGAAGGGTCTGGACTTGGCTAGGGCTGAGCTTCAAGCCCTaGGTGAGTTGTTCACCATCCAGCCCCAGGGCACTCAGCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSRRVWTWLGLSFKP*VSCSPSSPRALSNW Trigger: CCAGTTGCTGAGTGCCCTGGGGCTGGATGGTGAACAACTCACCCAGGGCTTGAAGCTCAGCCCTAGCCAAGTCCAGACCCTTCTACTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 |
||
| CDS-3UTR CAA 90 bp | GACCACGAAGTAGCCACAGCACACTTTCCCACATTCAGTGTGGCAAGGGGCACCCAAGCCCTGGGTGAGTaGTTCACCATCCAGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DHEVATAHFPTFSVARGTQALGE*FTIQPQ Trigger: CTGGGGCTGGATGGTGAACAACTCACCCAGGGCTTG...GGTGCCCCTTGCCACACTGAATGTGGGAAAGTGTGCTGTGGCTACTTCGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS GCA 90 bp | GCAAAGCAGGCCACAGAGATGGCTGATGAGATGGCCCACATCACCTaGAACAGGGTCTCTGAAATCACATGCATGGTCTCTGGCCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQATEMADEMAHIT*NRVSEITCMVSGPS Trigger: GCTAGGGCCAGAGACCATGCATGTGATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCATCTCATCAGCCATCTCTGTGGCCTGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAGGTCCGTGAGACCCAGAAGCAGCTCAGCTCTTTGGTACGGTGAGGGTACCATCAGGACAGCTTaGAGCAGATGTCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ARRSVRPRSSSALWYGEGTIRTA*SRCLLH Trigger: ATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGT...ACCCTCACCGTACCAAAGAGCTGAGCTGCTTCTGGGTCTCACGGACCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS GCA 90 bp | GATGAGATGGCCCACATCACCTGCAACAGGGTCTCTGAAATCACATaGATGGTCTCTGGCCCTAGCCAGGTATCCAACATCTCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DEMAHITCNRVSEIT*MVSGPSQVSNISFR Trigger: TCTGAAGGAGATGTTGGATACCTGGCTAGGGCCAGAGACCATGCATGTGATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCATCTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
||
| CDS CCA 90 bp | AGATGGCCCACATCACCTGCAACAGGGTCTCTGAAATCACATGCATaGTCTCTGGCCCTAGCCAGGTATCCAACATCTCCTTCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RWPTSPATGSLKSHA*SLALARYPTSPSEI Trigger: GATCTCTGAAGGAGATGTTGGATACCTGGCTAGGGCCAGAGACCATGCATGTGATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGACTACTGGAAATGGAGCTTCATTTGTTATATGAGAACAGTGTGTGTGCCACCATCAGGACAGCTTaGAGCAGATGTCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRLLEMELHLLYENSVCATIRTA*SRCLLH Trigger: ATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGT...GGCACACACACTGTTCTCATATAACAAATGAAGCTCCATTTCCAGTAGTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147699.2 |
||
| CDS CAA 90 bp | GCGGAGTGGACGAGGAAAAGGGCCACGAGGACCATCAGGACAGCTTaGAGCAGATGTCTGCTCCATAACGGAGTGCTGTGTGCGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEWTRKRATRTIRTA*SRCLLHNGVLCAPA Trigger: GGCAGGCGCACACAGCACTCCGTTATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGTCCTCGTGGCCCTTTTCCTCGTCCACTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038128.15 ENSMUST00000128835.8 ENSMUST00000133303.8 ENSMUST00000144681.2 ENSMUST00000147699.2 |
||
| CDS GCA 72 bp | TCTTCCATGCTCCTGGGCATCTTGGCTGCTCGCCTCTaGCTCCCTCTAAGCTCTTCTATCTGGCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSMLLGILAARL*LPLSSSIWRSS Trigger: GCTGGAGCGCCAGATAGAAGAGCTTAGAGGGAGGCAGAGGCGAGCAGCCAAGATGCCCAGGAGCATGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038128.15 |
||
| CDS CCA 72 bp | AGTTGTTCACCATCCAGCCCCAGGGCACTCAGCAACTaGGCAGCAATCCCAGACAGGGCAAAGCAGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SCSPSSPRALSN*AAIPDRAKQAT Trigger: TGTGGCCTGCTTTGCCCTGTCTGGGATTGCTGCCCAGTTGCTGAGTGCCCTGGGGCTGGATGGTGAACAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 |
||
| CDS CCA 72 bp | ATGACCAGTGCTGCTGCTCCCCACAGTAGAAGGGTCTaGACTTGGCTAGGGCTGAGCTTCAAGCCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MTSAAAPHSRRV*TWLGLSFKPWV Trigger: CACCCAGGGCTTGAAGCTCAGCCCTAGCCAAGTCCAGACCCTTCTACTGTGGGGAGCAGCAGCACTGGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 |
||
| CDS TCA 72 bp | CGAGGAAAAGGGCCACGAGGACCATCAGGACAGCTTTaGGCAGATGTCTGCTCCATAACGGAGTGCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGKGPRGPSGQL*ADVCSITECCV Trigger: CACACAGCACTCCGTTATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGTCCTCGTGGCCCTTTTCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038128.15 ENSMUST00000128835.8 ENSMUST00000133303.8 ENSMUST00000144681.2 ENSMUST00000147699.2 |
||
| CDS CCA 72 bp | ACAGGGCAAAGCAGGCCACAGAGATGGCTGATGAGATaGCCCACATCACCTGCAACAGGGTCTCTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: TGQSRPQRWLMR*PTSPATGSLKS Trigger: TGATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCATCTCATCAGCCATCTCTGTGGCCTGCTTTGCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
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| CDS CAA 72 bp | ACGAGGAAAAGGGCCACGAGGACCATCAGGACAGCTTaGAGCAGATGTCTGCTCCATAACGGAGTGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TRKRATRTIRTA*SRCLLHNGVLC Trigger: ACACAGCACTCCGTTATGGAGCAGACATCTGCTCAAAGCTGTCCTGATGGTCCTCGTGGCCCTTTTCCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038128.15 ENSMUST00000128835.8 ENSMUST00000133303.8 ENSMUST00000144681.2 ENSMUST00000147699.2 |
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| CDS GCA 72 bp | GCCACAGAGATGGCTGATGAGATGGCCCACATCACCTaGAACAGGGTCTCTGAAATCACATGCATGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ATEMADEMAHIT*NRVSEITCMVS Trigger: AGAGACCATGCATGTGATTTCAGAGACCCTGTTGCAGGTGATGTGGGCCATCTCATCAGCCATCTCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
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| CDS CAA 72 bp | TGCTCCATAACGGAGTGCTGTGTGCGCCTGCCATGTTaGTGTCTTGTGCTCTGTGCTCTGATCTCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: CSITECCVRLPC*CLVLCALISST Trigger: TGTGGATGAGATCAGAGCACAGAGCACAAGACACAAACATGGCAGGCGCACACAGCACTCCGTTATGGAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144681.2 |
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| CDS CCA 72 bp | ACATCACCTGCAACAGGGTCTCTGAAATCACATGCATaGTCTCTGGCCCTAGCCAGGTATCCAACATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TSPATGSLKSHA*SLALARYPTSP Trigger: AGGAGATGTTGGATACCTGGCTAGGGCCAGAGACCATGCATGTGATTTCAGAGACCCTGTTGCAGGTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038128.15 ENSMUST00000133303.8 ENSMUST00000147699.2 |
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| CDS CCA 72 bp | CAGGTATCCAACATCTCCTTCAGAGATCGGCCAATCTaGGTCAAAATATCAGCTGAGGTCTCCTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QVSNISFRDRPI*VKISAEVSFFC Trigger: ACAGAAGAAGGAGACCTCAGCTGATATTTTGACCCAGATTGGCCGATCTCTGAAGGAGATGTTGGATACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038128.15 ENSMUST00000128835.8 ENSMUST00000133303.8 ENSMUST00000144681.2 ENSMUST00000147699.2 |
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