Pregenerated sensors for TMEM108 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042757Ensembl transcript IDs: ENSMUST00000049452.15, ENSMUST00000189066.2, ENSMUST00000189588.7, ENSMUST00000215136.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTaGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGGAACAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: SWVSERSLLATLGTV*AGEGSWTRTQGNKG Trigger: CCCCTTGTTCCCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR TCA 90 bp | AGGCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTaGTGCTACAGTGAGGCTCCAGGCTGGCACCGTTCCCTTCCGTTT | + |
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Preference number: 1 (lower is better) Translates to: RLLMASTDPVKLDIQ*CYSEAPGWHRSLPF Trigger: AAACGGAAGGGAACGGTGCCAGCCTGGAGCCTCACTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR CCA 90 bp | GCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTaGAACCTCTACATGCCCAGAACAGTTAAGAGAAGCAATCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: ASTGDWSLSSSAQGS*NLYMPRTVKRSNQC Trigger: GCACTGATTGCTTCTCTTAACTGTTCTGGGCATGTAGAGGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGGGGCACACTGAGTCCTaGGAACCAGAGCATCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGGHTES*EPEHQD Trigger: GTCTTGATGCTCTGGTTCCCAGGACTCAGTGTGCCC...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR CCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGGCTTCCACGGGAGATTaGTCTCTTTCCTCATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGASTGD*SLSSSA Trigger: GGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGC...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAAGTGAAGGGCAAGGGCTaGGATCTGCATCTGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WVSERSLLATLGTVWAGEVKGKG*DLHLSS Trigger: GGAGGACAGATGCAGATCTCAGCCCTTGCCCTTCAC...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR GCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTGTCTCTTTCCTCATCTaGCCAGGGCTCCTGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: RSLPFCTPPACVLHCGAPVSFLI*PGLLEP Trigger: AGGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGAC...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAAAGTGAGGCTCCAGGCTaGCACCGTTCCCTTCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: WVSERSLLATLGTVWAGESEAPG*HRSLPF Trigger: AAACGGAAGGGAACGGTGCCAGCCTGGAGCCTCACT...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR CAA 90 bp | AAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATCCTaGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KAIGSRNPSWVSERS*LATLGTVWAGEGSW Trigger: CCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAGGGCACACTGAGTCCTaGGAACCAGAGCATCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIGHTES*EPEHQD Trigger: GTCTTGATGCTCTGGTTCCCAGGACTCAGTGTGCCC...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGGTCTCTTTCCTCATCTaGCCAGGGCTCCTGGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQVSFLI*PGLLEP Trigger: AGGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGAC...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGCCTGTAGACAGAATGGCACTTCTTTCAAGTGAGTCATTTGGCAATCTTGGGGCTGGAGGCTCTTaGTGGCCTCCACCGATCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLPVDRMALLSSESFGNLGAGGS*WPPPIL Trigger: CAGGATCGGTGGAGGCCATCAAGAGCCTCCAGCCCC...AAGATTGCCAAATGACTCACTTGAAAGAAGTGCCATTCTGTCTACAGGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR CCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATGGTGGGAGCATCCTGTaGGGTCATAAAAGGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SNREKQLAPETPLGSLRDGGSIL*GHKRGL Trigger: CAGCCCCCTTTTATGACCCCACAGGATGCTCCCACC...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR GCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTTCAGTGCAACCGCTTTaGTTAGAAATACCTTTATTT | + |
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Preference number: 2 (lower is better) Translates to: RSLPFCTPPACVLHCGAPSVQPL*LEIPLF Trigger: AAATAAAGGTATTTCTAAGCAAAGCGGTTGCACTGA...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACTCAGTGCAACCGCTTTaGTTAGAAATACCTTTATTT | + |
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Preference number: 2 (lower is better) Translates to: SASTGDWSLSSSAQGSWNSVQPL*LEIPLF Trigger: AAATAAAGGTATTTCTAAGCAAAGCGGTTGCACTGA...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATGTTTTGCACACCACCTaGCTGTGTCCTCCACTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TCFSWSTISLPLEKAILNVLHTT*LCPPLW Trigger: CCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAAC...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGAGGAGCACAATATCATTaGCTTTGGAGAAAGCAATAC | + |
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Preference number: 2 (lower is better) Translates to: GRREAVLMRKSQQQHRHGGAQYH*LWRKQY Trigger: GTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCC...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCCTGGAACCTCTACATaGCCAGAACAGTTAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TCFSWSTISLPLEKAILNPGTST*PEQLRE Trigger: TTCTCTTAACTGTTCTGGGCATGTAGAGGTTCCAGG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR CCA 72 bp | GAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTaGGGAAGGCAGCTGGACCCGGACCCAGGGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: EILVGHAGYSVG*GRQLDPDPGEQ Trigger: TTGTTCCCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR GCA 72 bp | AGTGAGGCTCCAGGCTGGCACCGTTCCCTTCCGTTTTaGACACCACCTGCCTGTGTCCTCCACTGTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: SEAPGWHRSLPF*TPPACVLHCGA Trigger: GGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACGGTGCCAGCCTGGAGCCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR CCA 72 bp | CCTCTTGGGTCTCTGAGAGATCCTTGTTGGCCACGCTaGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCC | + |
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Preference number: 3 (lower is better) Translates to: PLGSLRDPCWPR*VQCGLGKAAGP Trigger: GGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR CCA 72 bp | CCAGAAACCCCTCTTGGGTCTCTGAGAGATCCTTGTTaGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PETPLGSLRDPC*PRWVQCGLGKA Trigger: TGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGGGGTTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR GCA 72 bp | GACAGCGAAAGCGGATGGCAAGTTTGTGGGCAGGTCTaGCGTGCTTCTGCCTGTAGACAGAATGGCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: DSESGWQVCGQV*RASACRQNGTS Trigger: AGAAGTGCCATTCTGTCTACAGGCAGAAGCACGGCAGACCTGCCCACAAACTTGCCATCCGCTTTCGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR TCA 72 bp | AAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTaGGAGATCCTTGTTGGCCACGCTGGGTACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KSNWLQKPLLGL*EILVGHAGYSV Trigger: CACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR CCA 72 bp | GGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTaGAACCTCTACATGCCCAGAACAGTTAAGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GDWSLSSSAQGS*NLYMPRTVKRS Trigger: GCTTCTCTTAACTGTTCTGGGCATGTAGAGGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR CAA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGATCTGAGAGATCCTTGTaGGCCACGCTGGGTACAGTG | + |
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Preference number: 3 (lower is better) Translates to: GRREAVLMRKSQQQHRHGSERSL*ATLGTV Trigger: CACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGA...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR-3UTR CAA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACATCAGTGCAACCGCTTaGCTTAGAAATACCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: SASTGDWSLSSSAQGSWNISATA*LRNTFI Trigger: AATAAAGGTATTTCTAAGCAAAGCGGTTGCACTGAT...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR TCA 72 bp | GAAAGCAATACTGAATCCCAACCAACACTTGAACAGTaGAGGGCAAGGGCTGAGATCTGCATCTGTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: ESNTESQPTLEQ*RARAEICICPP Trigger: TGGAGGACAGATGCAGATCTCAGCCCTTGCCCTTCACTGTTCAAGTGTTGGTTGGGATTCAGTATTGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR-3UTR CAA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATAATCCCAACCAACACTaGAACAGTGAAGGGCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SNREKQLAPETPLGSLRDNPNQH*NSEGQG Trigger: CCCTTGCCCTTCACTGTTCAAGTGTTGGTTGGGATT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| 3UTR GCA 72 bp | GTTCCCAAGTCCTCAGGCTCTTTATTACATTCCGTGTaGTTCCAGAACTCTAATGTGCTCTGCCCTTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: VPKSSGSLLHSV*FQNSNVLCPLN Trigger: GTTCAAAGGGCAGAGCACATTAGAGTTCTGGAAGCACACGGAATGTAATAAAGAGCCTGAGGACTTGGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215136.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATATCAGTGCAACCGCTTaGCTTAGAAATACCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: TCFSWSTISLPLEKAILNISATA*LRNTFI Trigger: AATAAAGGTATTTCTAAGCAAAGCGGTTGCACTGAT...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGGGCCGGGTTGGGGCCTaGGGGGTTGCAGATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGGRVGA*GVADGP Trigger: GGGACCATCTGCAACCCCTCAGGCCCCAACCCGGCC...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR TCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTGTGGGGTCCTGGGCGTaGGCGCGGAGGGGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPVGSWA*ARRGLA Trigger: AGCCAGACCCCTCCGCGCTCACGCCCAGGACCCCAC...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGTGGGGTCCTGGGCGTaGGCGCGGAGGGGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNVGSWA*ARRGLA Trigger: AGCCAGACCCCTCCGCGCTCACGCCCAGGACCCCAC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGCTGCTGGAGAAACAGTaGTTTCTGAGACCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGLLEKQ*FLRPQR Trigger: CCTCTGGGGTCTCAGAAAGCACTGTTTCTCCAGCAG...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGTGCTCAAGCAGATGGTaGCTCTGTGCTGGGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGCSSRW*LCAGVC Trigger: ACAAACCCCAGCACAGAGCCACCATCTGCTTGAGCA...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR TCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAGCCCTGTGGCAGCCGTaGAGACCCCGGAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIALWQP*RPRSWQ Trigger: CTGCCAGCTCCGGGGTCTTCACGGCTGCCACAGGGC...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGCCCTGTGGCAGCCGTaGAGACCCCGGAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNALWQP*RPRSWQ Trigger: CTGCCAGCTCCGGGGTCTTCACGGCTGCCACAGGGC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAGGCCGGGTTGGGGCCTaGGGGGTTGCAGATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIGRVGA*GVADGP Trigger: GGGACCATCTGCAACCCCTCAGGCCCCAACCCGGCC...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGCAGCTGGACCCGGACCCAGGGTCTGTAGAGATTCCCTaGGAGATGGTTCGTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GHAGYSVGWGRQLDPDPGSVEIP*EMVRGQ Trigger: CTGTCCACGAACCATCTCCCAGGGAATCTCTACAGA...CCCTGGGTCCGGGTCCAGCTGCCTTCCCCAGCCCACACTGTACCCAGCGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCCACCAGCCCCCTTCCTaGAAGAGCCCGGGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTHQPPS*KSPGVW Trigger: CCAGACCCCCGGGCTCTTCCAGGAAGGGGGCTGGTG...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGCCCAGAGGGCCGGGTTaGGGCCTGAGGGGTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWPRGPG*GLRGCR Trigger: TCTGCAACCCCTCAGGCCCCAACCCGGCCCTCTGGG...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAAGGGGCACCTGTGGCTaGTGTGGCAGCTGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIRGTCG*CGSWLP Trigger: GGGGAGCCAGCTGCCACAGCAGCCACAGGTGCCCCT...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTTCCTTCCTGGCCAAGTaGCCACCCGGTACGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPSFLAK*PPGTGV Trigger: CACACCCGTACCGGGTGGCCACTTGGCCAGGAAGGA...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAGCTGGCTCCCCTCCTaGGCTGGTAAGGATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWSWLPS*AGKDGA Trigger: GGCCCCATCCTTACCAGCCCAGGAGGGGAGCCAGCT...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCTGGCAGGGGCACCTGTaGCTGCTGTGGCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTWQGHL*LLWQLA Trigger: AGCCAGCTGCCACAGCAGCCACAGGTGCCCCTGCCA...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGGGGCAGGCTGTGTACTaGCAGGGGCACCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWGQAVY*QGHLWL Trigger: CAGCCACAGGTGCCCCTGCCAGTACACAGCCTGCCC...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAAGCATCAAAGGCAGCCTaGGTGGGCCCTGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVSERSLLATLGTVWAGEASKAA*VGPVAA Trigger: GGCTGCCACAGGGCCCACCCAGGCTGCCTTTGATGC...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCGCATCAAAGGCAGCCTaGGTGGGCCCTGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTASKAA*VGPVAA Trigger: GGCTGCCACAGGGCCCACCCAGGCTGCCTTTGATGC...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCCCAGAGGGCCGGGTTaGGGCCTGAGGGGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNPRGPG*GLRGCR Trigger: TCTGCAACCCCTCAGGCCCCAACCCGGCCCTCTGGG...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTCCCTGTCGGTTGTCGTaGGGGAGGCCTCAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPPCRLS*GRPQPL Trigger: AAGAGGCTGAGGCCTCCCCCACGACAACCGACAGGG...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATACAGGGACCAGGCGGTTaGGGAAGTTGCCCGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIQGPGG*GSCPWL Trigger: CAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTG...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTGCGGCTGGTGGTTCCTaGTGGCTTTGTTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPAAGGS*WLCWQG Trigger: ACCCTGCCAACAAAGCCAGCAGGAACCACCAGCCGC...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAAATGGTCCCTGAGGGATaGCCGGGGAAGGGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVSERSLLATLGTVWAGEMVPEG*PGKGLR Trigger: TCTCAGCCCCTTCCCCGGGCATCCCTCAGGGACCAT...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCGGTTGTCATGGCAGCTaGAGGGGACCCTGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTGCHGS*RGPCGQ Trigger: CTGCCCACAGGGTCCCCTCCAGCTGCCATGACAACC...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATATGGCAGGGGCACCTGTaGCTGCTGTGGCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIWQGHL*LLWQLA Trigger: AGCCAGCTGCCACAGCAGCCACAGGTGCCCCTGCCA...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGGGCAGGCTGTGTACTaGCAGGGGCACCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNGQAVY*QGHLWL Trigger: CAGCCACAGGTGCCCCTGCCAGTACACAGCCTGCCC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGCTGAGGGGTTGCAGATaGTCCCTGAGGGATGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWLRGCR*SLRDAR Trigger: CCGGGCATCCCTCAGGGACCATCTGCAACCCCTCAG...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCCTGTGGACAGCACTGTaGAGAGAGGTCTGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTLWTAL*REVWGP Trigger: GGGGCCCCAGACCTCTCTCCACAGTGCTGTCCACAG...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTAGTCTGGTAGGGCTGTaGGGTGCTGTCACCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPSLVGL*GAVTMV Trigger: CACCATGGTGACAGCACCTCACAGCCCTACCAGACT...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAGGGTGTGGTTGTCATaGCAGCTGGAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWRVWLS*QLEGTL Trigger: CAGGGTCCCCTCCAGCTGCCATGACAACCACACCCT...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTCTGAGTGGGAGGGTGTaGTTGTCATGGCAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPLSGRV*LSWQLE Trigger: CTCCAGCTGCCATGACAACCACACCCTCCCACTCAG...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTGGGAGGCTCTCTGAGTaGGAGGGTGTGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPGRLSE*EGVVVM Trigger: CATGACAACCACACCCTCCCACTCAGAGAGCCTCCC...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTTCCTGCTGGCTTTGTTaGCAGGGTAGTGGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPSCWLC*QGSGGG Trigger: ACCCCCACCACTACCCTGCCAACAAAGCCAGCAGGA...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGACGAGTGGTGGCCCGTaGGGCCACTGTGGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQTSGGP*GHCGAA Trigger: AGCCGCCCCACAGTGGCCCCACGGGCCACCACTCGT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGGCTCTGAGAAGGCACTaGGGCAGGCTGTGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWALRRH*GRLCTG Trigger: GCCAGTACACAGCCTGCCCCAGTGCCTTCTCAGAGC...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCAGCCAAGAGTCACTGTaGCTGGCGCTGTCCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTSQESL*LALSCT Trigger: CGTGCAGGACAGCGCCAGCCACAGTGACTCTTGGCT...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCCGGAGCTGGCAGACGTaGGTCTGTCAGTGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTRSWQT*VCQCQV Trigger: CACCTGACACTGACAGACCCACGTCTGCCAGCTCCG...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAACGGGGCTCTGAGAGCTaGTCCTCTGAGGTCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSERSLLATLGTVWAGERGSES*SSEVSR Trigger: CCTAGAGACCTCAGAGGACCAGCTCTCAGAGCCCCG...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCCGGGGCTCTGAGAGCTaGTCCTCTGAGGTCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTRGSES*SSEVSR Trigger: CCTAGAGACCTCAGAGGACCAGCTCTCAGAGCCCCG...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATACTCGATAGTCGCCATTaGCTGGGGAGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYILDSRH*LGSGAL Trigger: CAGAGCCCCGCTCCCCAGCCAATGGCGACTATCGAG...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| 3UTR CAA 72 bp | TCCAGAAACCCCTCTTGGGTCTCTGAGAGATCCTTGTaGGCCACGCTGGGTACAGTGTGGGCTGGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRNPSWVSERSL*ATLGTVWAGEG Trigger: GCCTTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGGGGTTTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| 3UTR CAA 72 bp | GGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATCCTaGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRNPSWVSERS*LATLGTVWAGE Trigger: TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCAGAAACAGTGCTTTCTaGGACCCCAGAGGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPREIGLFPHLPRAPGTRNSAF*DPRGPG Trigger: ACCCGGCCCTCTGGGGTCTCAGAAAGCACTGTTTCT...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGCGGCTGGTGGTTCCTaGTGGCTTTGTTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNAAGGS*WLCWQG Trigger: ACCCTGCCAACAAAGCCAGCAGGAACCACCAGCCGC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATATGGGGCCTGAGGGGTTaGAGATGGTCCCTGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIWGLRG*RWSLRD Trigger: ATCCCTCAGGGACCATCTGCAACCCCTCAGGCCCCA...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACTGGGGCCTGAGGGGTTaGAGATGGTCCCTGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNWGLRG*RWSLRD Trigger: ATCCCTCAGGGACCATCTGCAACCCCTCAGGCCCCA...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATACTGGAGGGGACCCTGTaGGCAGAGGACTTTCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYILEGTL*AEDFRD Trigger: ATCCCGAAAGTCCTCTGCCCACAGGGTCCCCTCCAG...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATACTGTGGGGCGGCTGGTaGTTCCTGCTGGCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYILWGGW*FLLALL Trigger: CAACAAAGCCAGCAGGAACCACCAGCCGCCCCACAG...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGCACCAGCCCCCTTCCTaGAAGAGCCCGGGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQHQPPS*KSPGVW Trigger: CCAGACCCCCGGGCTCTTCCAGGAAGGGGGCTGGTG...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAGTTGCCCGTGGCTGTaGACAGCACTGTGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWSCPWL*TALWRE Trigger: CTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACT...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGATGGTGGCTCTGTGCTaGGGTTTGTCCCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWMVALC*GLSPSA Trigger: GGCTGAAGGGGACAAACCCCAGCACAGAGCCACCAT...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR TCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTTGTCAGTGTCAGGTGTaGCAGCAAGCCAAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPCQCQV*QQAKSH Trigger: GTGACTCTTGGCTTGCTGTCACACCTGACACTGACA...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR TCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGCAGGGACCAGGCGGTTaGGGAAGTTGCCCGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQQGPGG*GSCPWL Trigger: CAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTG...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | AAGCCCCTCCCATCAATTTGGGCATCCATTCACAGGGCAGACAGGCAGAAGCTCGGTCCATGGCTCCGCTaGGAACTGCTTCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPLPSIWASIHRADRQKLGPWLR*ELLPRA Trigger: TGCTCTGGGAAGCAGTTCCCAGCGGAGCCATGGACC...GAGCTTCTGCCTGTCTGCCCTGTGAATGGATGCCCAAATTGATGGGAGGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215136.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGATGGTCCCTGAGGGATaGCCGGGGAAGGGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQMVPEG*PGKGLR Trigger: TCTCAGCCCCTTCCCCGGGCATCCCTCAGGGACCAT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTCTCAGCCTCTTCCTCTaGTGGAGAAACAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPLSLFL*WRNSAF Trigger: GAAAGCACTGTTTCTCCAGCAGAGGAAGAGGCTGAG...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCAGATGGTGGCTCTGTaGTGGGGTTTGTCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNQMVAL*WGLSPS Trigger: TGAAGGGGACAAACCCCAGCACAGAGCCACCATCTG...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGGGTTGTCATGGCAGCTaGAGGGGACCCTGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQGCHGS*RGPCGQ Trigger: CTGCCCACAGGGTCCCCTCCAGCTGCCATGACAACC...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATACGAGTGGTGGCCCGTaGGGCCACTGTGGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNREKQLAPETPLGSLRDTSGGP*GHCGAA Trigger: AGCCGCCCCACAGTGGCCCCACGGGCCACCACTCGT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGTCCTTCCTGGCCAAGTaGCCACCCGGTACGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQSFLAK*PPGTGV Trigger: CACACCCGTACCGGGTGGCCACTTGGCCAGGAAGGA...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGTGCTCAAGCAGATGGTaGCTCTGTGCTGGGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWCSSRW*LCAGVC Trigger: ACAAACCCCAGCACAGAGCCACCATCTGCTTGAGCA...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGGGTTGTTCTCAGGGTTaGCCGTCTTCTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWGCSQG*PSSSSS Trigger: GGAGGAAGAAGAAGACGGCCAACCCTGAGAACAACC...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGCTCGATAGTCGCCATTaGCTGGGGAGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQLDSRH*LGSGAL Trigger: CAGAGCCCCGCTCCCCAGCCAATGGCGACTATCGAG...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACTGTCAGTGTCAGGTGTaGCAGCAAGCCAAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNCQCQV*QQAKSH Trigger: GTGACTCTTGGCTTGCTGTCACACCTGACACTGACA...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGGGTAGGGCTGTGAGGTaGTGTCACCATGGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQGRAVR*CHHGAW Trigger: CCAGGCACCATGGTGACAGCACCTCACAGCCCTACC...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGCTCAGCCTCTTCCTCTaGTGGAGAAACAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSASTGDWSLSSSAQGSWLSLFL*WRNSAF Trigger: GAAAGCACTGTTTCTCCAGCAGAGGAAGAGGCTGAG...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTTCTTCTTCCTCCTCATaGAGCACACTGTCAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLPFCTPPACVLHCGAPSSSSS*STLSTG Trigger: TCCTGTTGACAGTGTGCTGCATGAGGAGGAAGAAGA...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCGAGTACCAGTGCTTTaGTCAGTGCCAAGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNRVPVL*SVPRSG Trigger: TCCTGACCTTGGCACTGACCAAAGCACTGGTACTCG...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACAGATGTGCTGAGCTCTaGTTTCGTCCCCTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNRCAEL*FRPLWL Trigger: AAGCCAGAGGGGACGAAACCAGAGCTCAGCACATCT...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAAGATGTGCTGAGCTCTaGTTTCGTCCCCTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIRCAEL*FRPLWL Trigger: AAGCCAGAGGGGACGAAACCAGAGCTCAGCACATCT...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATATCTTGCTCAAGCAGATaGTGGCTCTGTGCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYISCSSR*WLCAGV Trigger: AACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGA...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAACGAACAGTGTTTCCTaGCAGAAGGGGTTCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYITNSVS*QKGFTR Trigger: CCTCGTGAACCCCTTCTGCCAGGAAACACTGTTCGT...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGGGTGCCCTTCTGGATaGGATACTGTAGTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNGCPSG*DTVVSR Trigger: TCTGGAAACTACAGTATCTCATCCAGAAGGGCACCC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATACAGTGCTTTGGTCAGTaGCAAGGTCAGGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIQCFGQ*QGQEKA Trigger: AGCTTTCTCCTGACCTTGGCACTGACCAAAGCACTG...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGTCCTGCTGGCTTTGTTaGCAGGGTAGTGGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQSCWLC*QGSGGG Trigger: ACCCCCACCACTACCCTGCCAACAAAGCCAGCAGGA...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGAAGCTGGCTCCCCTCCTaGGCTGGTAAGGATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRREAVLMRKSQQQHRHGSWLPS*AGKDGA Trigger: GGCCCCATCCTTACCAGCCCAGGAGGGGAGCCAGCT...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGTCCCCTTCAGCCACGTaGGAGATGTTGGCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQSPSAT*EMLATV Trigger: GACTGTGGCCAACATCTCCCACGTGGCTGAAGGGGA...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGATGGTGGCTCTGTGCTaGGGTTTGTCCCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQMVALC*GLSPSA Trigger: GGCTGAAGGGGACAAACCCCAGCACAGAGCCACCAT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATAGAGGACTTTCGGGATaGGGGACGGCAGCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNREKQLAPETPLGSLRDRGLSG*GTAAVP Trigger: GGGGACAGCTGCCGTCCCGCATCCCGAAAGTCCTCT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAAGGAGGGTGCCCTTCTaGATGAGATACTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIRRVPF*MRYCSF Trigger: GAAACTACAGTATCTCATCCAGAAGGGCACCCTCCT...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACAGGAGGGTGCCCTTCTaGATGAGATACTGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SASTGDWSLSSSAQGSWNRRVPF*MRYCSF Trigger: GAAACTACAGTATCTCATCCAGAAGGGCACCCTCCT...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGACTGTGGACAGCACTGTaGAGAGAGGTCTGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRREAVLMRKSQQQHRHGLWTAL*REVWGP Trigger: GGGGCCCCAGACCTCTCTCCACAGTGCTGTCCACAG...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGAGATTCCCTGGGAGATaGTTCGTGGACAGCGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQRFPGR*FVDSEY Trigger: GTACTCGCTGTCCACGAACCATCTCCCAGGGAATCT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATAAGAGCCCGGGGGTCTaGGGGGCCGACGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNKSPGV*GADEWW Trigger: CCACCACTCGTCGGCCCCCCAGACCCCCGGGCTCTT...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATAGCCAAGAGTCACTGTaGCTGGCGCTGTCCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SNREKQLAPETPLGSLRDSQESL*LALSCT Trigger: CGTGCAGGACAGCGCCAGCCACAGTGACTCTTGGCT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGACGAACAGTGTTTCCTaGCAGAAGGGGTTCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQTNSVS*QKGFTR Trigger: CCTCGTGAACCCCTTCTGCCAGGAAACACTGTTCGT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR TCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGGGGTGCCCTTCTGGATaGGATACTGTAGTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQGCPSG*DTVVSR Trigger: TCTGGAAACTACAGTATCTCATCCAGAAGGGCACCC...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATCTGAGTGGGAGGGTGTaGTTGTCATGGCAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNREKQLAPETPLGSLRDLSGRV*LSWQLE Trigger: CTCCAGCTGCCATGACAACCACACCCTCCCACTCAG...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR GCA 90 bp | GCTCTTGATGGCCTCCACCGATCCTGTCAAACTCGACATTCAGTGATGCTACAGAGGCAATATCCATCTTaGTCAAGCAGATGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALDGLHRSCQTRHSVMLQRQYPS*SSRWWL Trigger: GAGCCACCATCTGCTTGAGCAAGATGGATATTGCCT...CTGTAGCATCACTGAATGTCGAGTTTGACAGGATCGGTGGAGGCCATCAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGATGGTTTCGTCCCCTCTaGCTTTCCTTCCTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRREAVLMRKSQQQHRHGWFRPL*LSFLAK Trigger: CTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCA...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR GCA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAAGGGGCACCTGTGGCTaGTGTGGCAGCTGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NRNIMIRLRSDSNMLESERGTCG*CGSWLP Trigger: GGGGAGCCAGCTGCCACAGCAGCCACAGGTGCCCCT...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTGTAGACAGAATGGCACTTCTTTCAAGTGAGTCATTTGGCAATCTTAGTTGCCCGTGGCTGTaGACAGCACTGTGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPVDRMALLSSESFGNLSCPWL*TALWRE Trigger: CTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACT...AAGATTGCCAAATGACTCACTTGAAAGAAGTGCCATTCTGTCTACAGGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCTGGAGGGGACCCTGTaGGCAGAGGACTTTCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNLEGTL*AEDFRD Trigger: ATCCCGAAAGTCCTCTGCCCACAGGGTCCCCTCCAG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATAGGGTGTGGTTGTCATaGCAGCTGGAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNRVWLS*QLEGTL Trigger: CAGGGTCCCCTCCAGCTGCCATGACAACCACACCCT...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCGGAGCTGGCAGACGTaGGTCTGTCAGTGTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNRSWQT*VCQCQV Trigger: CACCTGACACTGACAGACCCACGTCTGCCAGCTCCG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR TCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATAGAAACAGTGCTTTCTaGGACCCCAGAGGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNRNSAF*DPRGPG Trigger: ACCCGGCCCTCTGGGGTCTCAGAAAGCACTGTTTCT...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATAGGCAATATCCATCTTaGTCAAGCAGATGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNREKQLAPETPLGSLRDRQYPS*SSRWWL Trigger: GAGCCACCATCTGCTTGAGCAAGATGGATATTGCCT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR CCA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAACTGAGGGGTTGCAGATaGTCCCTGAGGGATGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NRNIMIRLRSDSNMLESELRGCR*SLRDAR Trigger: CCGGGCATCCCTCAGGGACCATCTGCAACCCCTCAG...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| 3UTR CAA 72 bp | CCTTTGGAGAAAGCAATACTGAATCCCAACCAACACTaGAACAGTGAAGGGCAAGGGCTGAGATCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLEKAILNPNQH*NSEGQGLRSAS Trigger: AGATGCAGATCTCAGCCCTTGCCCTTCACTGTTCAAGTGTTGGTTGGGATTCAGTATTGCTTTCTCCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR GCA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAGGTAGGGCTGTGAGGTaGTGTCACCATGGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRNIMIRLRSDSNMLESEGRAVR*CHHGAW Trigger: CCAGGCACCATGGTGACAGCACCTCACAGCCCTACC...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCAGATGGTGGCTCTGTaGTGGGGTTTGTCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNQMVAL*WGLSPS Trigger: TGAAGGGGACAAACCCCAGCACAGAGCCACCATCTG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATTGGTTTCGTCCCCTCTaGCTTTCCTTCCTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNWFRPL*LSFLAK Trigger: CTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCA...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAGCTCTGAGAAGGCACTaGGGCAGGCTGTGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRNIMIRLRSDSNMLESEALRRH*GRLCTG Trigger: GCCAGTACACAGCCTGCCCCAGTGCCTTCTCAGAGC...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR GCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCTGCTGGAGAAACAGTaGTTTCTGAGACCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNLLEKQ*FLRPQR Trigger: CCTCTGGGGTCTCAGAAAGCACTGTTTCTCCAGCAG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | CTTCTGCCTGTAGACAGAATGGCACTTCTTTCAAGTGAGTCATTTGGCAATCTTTCTTCTTCCTCCTCATaGAGCACACTGTCAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVDRMALLSSESFGNLSSSSS*STLSTG Trigger: TCCTGTTGACAGTGTGCTGCATGAGGAGGAAGAAGA...AAGATTGCCAAATGACTCACTTGAAAGAAGTGCCATTCTGTCTACAGGCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCGAGTACCAGTGCTTTaGTCAGTGCCAAGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNRVPVL*SVPRSG Trigger: TCCTGACCTTGGCACTGACCAAAGCACTGGTACTCG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATAGATTCCCTGGGAGATaGTTCGTGGACAGCGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNRFPGR*FVDSEY Trigger: GTACTCGCTGTCCACGAACCATCTCCCAGGGAATCT...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CCA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAGGGAGGCTCTCTGAGTaGGAGGGTGTGGTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NRNIMIRLRSDSNMLESEGRLSE*EGVVVM Trigger: CATGACAACCACACCCTCCCACTCAGAGAGCCTCCC...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATTCTTGCTCAAGCAGATaGTGGCTCTGTGCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNSCSSR*WLCAGV Trigger: AACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGA...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR GCA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCAGTGCTTTGGTCAGTaGCAAGGTCAGGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCFSWSTISLPLEKAILNQCFGQ*QGQEKA Trigger: AGCTTTCTCCTGACCTTGGCACTGACCAAAGCACTG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| 3UTR CAA 72 bp | ACAACATTTAACCTGCTTCTTTGTGGGTTGAAGTCTTaGAAGAGAGACAAGCAGACTCTAAGTAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TTFNLLLCGLKS*KRDKQTLSRSM Trigger: CATGGACCTACTTAGAGTCTGCTTGTCTCTCTTCAAAGACTTCAACCCACAAAGAAGCAGGTTAAATGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
||
| CDS TCA 90 bp | CCCTCTGGCTTTCCTTCCTGGCCAAGTGGCCACCCGGTACGGGTGTaGGAGTGCGAGTCGAACCACCAGCCCCCTTCCTGGAAGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSGFPSWPSGHPVRV*ECESNHQPPSWKSP Trigger: CGGGCTCTTCCAGGAAGGGGGCTGGTGGTTCGACTCGCACTCTCACACCCGTACCGGGTGGCCACTTGGCCAGGAAGGAAAGCCAGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS TCA 90 bp | TGGCCACAGTCCCCGGCTTCCAGGTCCCAGCAGGGACCAGGCGGTTaGGGAAGTTGCCCGTGGCTGTGGACAGCACTGTGGAGAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPQSPASRSQQGPGG*GSCPWLWTALWREV Trigger: GACCTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAAGCCGGGGACTGTGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 90 bp | GGACGCTTCGGCCCCAGATGTGCTGAGCTCTGGTTTCGTCCCCTCTaGCTTTCCTTCCTGGCCAAGTGGCCACCCGGTACGGGTGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRFGPRCAELWFRPL*LSFLAKWPPGTGVR Trigger: TCTCACACCCGTACCGGGTGGCCACTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCAGAGCTCAGCACATCTGGGGCCGAAGCGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | CGTTCCCTTCCGTTTTGCACACCACCTGCCTGTGTCCTCCACTGTGGTGCCCCTGCCACGTGGGAGATGTaGGCCACAGTCCCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLPFCTPPACVLHCGAPATWEM*ATVPGF Trigger: GAAGCCGGGGACTGTGGCCAACATCTCCCACGTGGC...AGGGGCACCACAGTGGAGGACACAGGCAGGTGGTGTGCAAAACGGAAGGGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGCAGGGACCAGGCGGTaGAGGAAGTTGCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SASTGDWSLSSSAQGSWNAGTRR*RKLPVA Trigger: AGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | CAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACCGCTCTGTGCTGGGGTTaGTCCCCTTCAGCCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPREIGLFPHLPRAPGTALCWG*SPSATW Trigger: CCACGTGGCTGAAGGGGACAAACCCCAGCACAGAGC...GGTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACAGGCGGTTGAGGAAGTaGCCCGTGGCTGTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASTGDWSLSSSAQGSWNRRLRK*PVAVDS Trigger: GCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCT...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGAACGCTCTGTGCTGGGGTTaGTCCCCTTCAGCCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SASTGDWSLSSSAQGSWNALCWG*SPSATW Trigger: CCACGTGGCTGAAGGGGACAAACCCCAGCACAGAGC...GTTCCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS CCA 90 bp | CTGCCTGAGGGGAGGGTCTGTAGAGATTCCCTGGGAGATGGTTCGTaGACAGCGAGTACCAGTGCTTTGGTCAGTGCCAAGGTCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPEGRVCRDSLGDGS*TASTSALVSAKVRR Trigger: TCTCCTGACCTTGGCACTGACCAAAGCACTGGTACTCGCTGTCCACGAACCATCTCCCAGGGAATCTCTACAGACCCTCCCCTCAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAGCGAGTACCAGTGCTTaGGTCAGTGCCAAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIASTSA*VSAKVR Trigger: CCTGACCTTGGCACTGACCAAAGCACTGGTACTCGC...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS TCA 90 bp | GTGGGTTCCAGAAATGTCCAGAGATCACAGGTTCAACAGCCGGACTaGGGTCCATGGCTCCGCTGGGAACTGCTTCCCAGAGCACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGSRNVQRSQVQQPD*GPWLRWELLPRAQS Trigger: AGACTGTGCTCTGGGAAGCAGTTCCCAGCGGAGCCATGGACCTCAGTCCGGCTGTTGAACCTGTGATCTCTGGACATTTCTGGAACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215136.2 |
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| CDS GCA 90 bp | ATGACCCAGGCAATATCCATCTTGCTCAAGCAGATGGTGGCTCTGTaGTGGGGTTTGTCCCCTTCAGCCACGTGGGAGATGTTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MTQAISILLKQMVAL*WGLSPSATWEMLAT Trigger: TGTGGCCAACATCTCCCACGTGGCTGAAGGGGACAAACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGATGGATATTGCCTGGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | CGTTCAGCTTCCACGGGAGATTGGTCTCTTTCCTCATCTGCCCAGGGCTCCTGGCAGGCAATATCCATCTaGCTCAAGCAGATGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSASTGDWSLSSSAQGSWQAISI*LKQMVA Trigger: AGCCACCATCTGCTTGAGCAAGATGGATATTGCCTG...CCAGGAGCCCTGGGCAGATGAGGAAAGAGACCAATCTCCCGTGGAAGCTGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | CACCTGCCTGTGTCCTCCACTGTGGTGCCCCTATCCCCACCACTAGGATACATAAGGTTGTTCTCAGGGTaGGCCGTCTTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPVSSTVVPLSPPLGYIRLFSG*AVFFFL Trigger: GAGGAAGAAGAAGACGGCCAACCCTGAGAACAACCT...TATGTATCCTAGTGGTGGGGATAGGGGCACCACAGTGGAGGACACAGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | TGGGTCTCTGAGAGATCCTTGTTGGCCACGCTGGGTACAGTGTGGGCTGGGGAACTAGATCTCGGAAACTaGGTCGTTTCCCACGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: WVSERSLLATLGTVWAGELDLGN*VVSHEQ Trigger: CTGTTCGTGGGAAACGACCAAGTTTCCGAGATCTAG...TTCCCCAGCCCACACTGTACCCAGCGTGGCCAACAAGGATCTCTCAGAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS TCA 90 bp | CCCATCACTGTAGACGTGGTGTCTGTAGGAGGGTGCCCTTCTGGATaGGATACTGTAGTTTCCAGAGTAGCTGCAGCCTGTGATGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PITVDVVSVGGCPSG*DTVVSRVAAACDEG Trigger: ACCCTCATCACAGGCTGCAGCTACTCTGGAAACTACAGTATCTCATCCAGAAGGGCACCCTCCTACAGACACCACGTCTACAGTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATTTGGGGCCTGAGGGGTaGCAGATGGTCCCTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNREKQLAPETPLGSLRDLGPEG*QMVPEG Trigger: TCCCTCAGGGACCATCTGCAACCCCTCAGGCCCCAA...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CAA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATAGGCGGTTGAGGAAGTaGCCCGTGGCTGTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNREKQLAPETPLGSLRDRRLRK*PVAVDS Trigger: GCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCT...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCTGTAGACAGAATGGCACTTCTTTCAAGTGAGTCATTTGGCAATCTTGCAGGGACCAGGCGGTaGAGGAAGTTGCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPVDRMALLSSESFGNLAGTRR*RKLPVA Trigger: AGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGC...AAGATTGCCAAATGACTCACTTGAAAGAAGTGCCATTCTGTCTACAGGCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CAA 90 bp | AGTAACAGAGAAAAGCAATTGGCTCCAGAAACCCCTCTTGGGTCTCTGAGAGATGCGAGTACCAGTGCTTaGGTCAGTGCCAAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNREKQLAPETPLGSLRDASTSA*VSAKVR Trigger: CCTGACCTTGGCACTGACCAAAGCACTGGTACTCGC...ATCTCTCAGAGACCCAAGAGGGGTTTCTGGAGCCAATTGCTTTTCTCTGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS CCA 90 bp | GAGATTCCCTGGGAGATGGTTCGTGGACAGCGAGTACCAGTGCTTTaGTCAGTGCCAAGGTCAGGAGAAAGCTTAATAGTTGGCAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: EIPWEMVRGQRVPVL*SVPRSGESLIVGNR Trigger: TCTATTGCCAACTATTAAGCTTTCTCCTGACCTTGGCACTGACCAAAGCACTGGTACTCGCTGTCCACGAACCATCTCCCAGGGAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAGCCACGTGGGAGATGTaGGCCACAGTCCCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRNIMIRLRSDSNMLESEATWEM*ATVPGF Trigger: GAAGCCGGGGACTGTGGCCAACATCTCCCACGTGGC...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CAA 90 bp | GGAAGAAGAGAGGCAGTCCTGATGAGAAAATCACAGCAACAACACAGACATGGACAGGCAATATCCATCTaGCTCAAGCAGATGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRREAVLMRKSQQQHRHGQAISI*LKQMVA Trigger: AGCCACCATCTGCTTGAGCAAGATGGATATTGCCTG...TCCATGTCTGTGTTGTTGCTGTGATTTTCTCATCAGGACTGCCTCTCTTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS-3UTR CAA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATCTAGATCTCGGAAACTaGGTCGTTTCCCACGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TCFSWSTISLPLEKAILNLDLGN*VVSHEQ Trigger: CTGTTCGTGGGAAACGACCAAGTTTCCGAGATCTAG...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | ACCTGTTTCTCATGGAGCACAATATCATTGCCTTTGGAGAAAGCAATACTGAATGTTACCCTTGTAGATTaGGAAGATCTTCCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCFSWSTISLPLEKAILNVTLVD*EDLPQR Trigger: CCTCTGGGGAAGATCTTCCAAATCTACAAGGGTAAC...ATTCAGTATTGCTTTCTCCAAAGGCAATGATATTGTGCTCCATGAGAAACAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049452.15 ENSMUST00000189588.7 |
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| CDS-3UTR CAA 90 bp | AACAGAAATATTATGATAAGGTTAAGGTCAGACAGCAACATGTTAGAGAGCGAAGTTACCCTTGTAGATTaGGAAGATCTTCCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRNIMIRLRSDSNMLESEVTLVD*EDLPQR Trigger: CCTCTGGGGAAGATCTTCCAAATCTACAAGGGTAAC...TTCGCTCTCTAACATGTTGCTGTCTGACCTTAACCTTATCATAATATTTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049452.15 |
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| CDS CAA 90 bp | GTCCCCGGCTTCCAGGTCCCAGCAGGGACCAGGCGGTTGAGGAAGTaGCCCGTGGCTGTGGACAGCACTGTGGAGAGAGGTCTGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VPGFQVPAGTRRLRK*PVAVDSTVERGLGP Trigger: GGGCCCCAGACCTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAAGCCGGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | GTCCCTGAGGGATGCCCGGGGAAGGGGCTGAGACAGTaGCATCAAAGGCAGCCTGGGTGGGCCCTGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPEGCPGKGLRQ*HQRQPGWALWQ Trigger: CTGCCACAGGGCCCACCCAGGCTGCCTTTGATGCCACTGTCTCAGCCCCTTCCCCGGGCATCCCTCAGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TGCCCGTGGCTGTGGACAGCACTGTGGAGAGAGGTCTaGGGCCCCTGTCGGTTGTCGTGGGGGAGGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPWLWTALWREV*GPCRLSWGRPQ Trigger: CTGAGGCCTCCCCCACGACAACCGACAGGGGCCCCAGACCTCTCTCCACAGTGCTGTCCACAGCCACGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
||
| CDS TCA 72 bp | CATCAAAGGCAGCCTGGGTGGGCCCTGTGGCAGCCGTaGAGACCCCGGAGCTGGCAGACGTGGGTCTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQRQPGWALWQP*RPRSWQTWVCQ Trigger: CTGACAGACCCACGTCTGCCAGCTCCGGGGTCTTCACGGCTGCCACAGGGCCCACCCAGGCTGCCTTTGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS TCA 72 bp | TCCCCGGCTTCCAGGTCCCAGCAGGGACCAGGCGGTTaGGGAAGTTGCCCGTGGCTGTGGACAGCACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPASRSQQGPGG*GSCPWLWTALW Trigger: CCACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAAGCCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
||
| CDS CAA 72 bp | GTCCCCGGCTTCCAGGTCCCAGCAGGGACCAGGCGGTaGAGGAAGTTGCCCGTGGCTGTGGACAGCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPGFQVPAGTRR*RKLPVAVDSTV Trigger: CACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAAGCCGGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
||
| CDS CCA 72 bp | GTCCTGCACGTCACCATGAGGGCTCTGAGAAGGCACTaGGGCAGGCTGTGTACTGGCAGGGGCACCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLHVTMRALRRH*GRLCTGRGTCG Trigger: GCCACAGGTGCCCCTGCCAGTACACAGCCTGCCCCAGTGCCTTCTCAGAGCCCTCATGGTGACGTGCAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 90 bp | TTGGCCACAGTCCCCGGCTTCCAGGTCCCAGCAGGGACCAGGCGGTaGAGGAAGTTGCCCGTGGCTGTGGACAGCACTGTGGAGAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LATVPGFQVPAGTRR*RKLPVAVDSTVERG Trigger: ACCTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAAGCCGGGGACTGTGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | GGCCCCAGATGTGCTGAGCTCTGGTTTCGTCCCCTCTaGCTTTCCTTCCTGGCCAAGTGGCCACCCGGTACG | + |
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Preference number: 6 (lower is better) Translates to: GPRCAELWFRPL*LSFLAKWPPGT Trigger: CGTACCGGGTGGCCACTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCAGAGCTCAGCACATCTGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | CCCAGAGGACGCTTCGGCCCCAGATGTGCTGAGCTCTaGTTTCGTCCCCTCTGGCTTTCCTTCCTGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PRGRFGPRCAEL*FRPLWLSFLAK Trigger: CTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCAGAGCTCAGCACATCTGGGGCCGAAGCGTCCTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TCACGAGGACCATCCCAGTGTCTCGATAGTCGCCATTaGCTGGGGAGCGGGGCTCTGAGAGCTGGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRGPSQCLDSRH*LGSGALRAGPL Trigger: CAGAGGACCAGCTCTCAGAGCCCCGCTCCCCAGCCAATGGCGACTATCGAGACACTGGGATGGTCCTCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 72 bp | TTCCAGGTCCCAGCAGGGACCAGGCGGTTGAGGAAGTaGCCCGTGGCTGTGGACAGCACTGTGGAGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FQVPAGTRRLRK*PVAVDSTVERG Trigger: ACCTCTCTCCACAGTGCTGTCCACAGCCACGGGCAACTTCCTCAACCGCCTGGTCCCTGCTGGGACCTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS TCA 72 bp | CGGAGCTGGCAGACGTGGGTCTGTCAGTGTCAGGTGTaGCAGCAAGCCAAGAGTCACTGTGGCTGGCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSWQTWVCQCQV*QQAKSHCGWRC Trigger: ACAGCGCCAGCCACAGTGACTCTTGGCTTGCTGTCACACCTGACACTGACAGACCCACGTCTGCCAGCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | GGGGGCTGCCTGAGGGGAGGGTCTGTAGAGATTCCCTaGGAGATGGTTCGTGGACAGCGAGTACCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGCLRGGSVEIP*EMVRGQRVPVL Trigger: AAGCACTGGTACTCGCTGTCCACGAACCATCTCCCAGGGAATCTCTACAGACCCTCCCCTCAGGCAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TGGTTTCGTCCCCTCTGGCTTTCCTTCCTGGCCAAGTaGCCACCCGGTACGGGTGTGAGAGTGCGAGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: WFRPLWLSFLAK*PPGTGVRVRVE Trigger: TTCGACTCGCACTCTCACACCCGTACCGGGTGGCCACTTGGCCAGGAAGGAAAGCCAGAGGGGACGAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | GGGAGGGTCTGTAGAGATTCCCTGGGAGATGGTTCGTaGACAGCGAGTACCAGTGCTTTGGTCAGTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GRVCRDSLGDGS*TASTSALVSAK Trigger: CTTGGCACTGACCAAAGCACTGGTACTCGCTGTCCACGAACCATCTCCCAGGGAATCTCTACAGACCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 72 bp | CCTCCTGGGCTGGTAAGGATGGGGCCACTCCCCTGGTaGGATCTGATAAAGCCTGGCTTGTCCTTTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: PPGLVRMGPLPW*DLIKPGLSFTG Trigger: ACCTGTAAAGGACAAGCCAGGCTTTATCAGATCCAACCAGGGGAGTGGCCCCATCCTTACCAGCCCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 72 bp | ATCTTGCTCAAGCAGATGGTGGCTCTGTGCTGGGGTTaGTCCCCTTCAGCCACGTGGGAGATGTTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ILLKQMVALCWG*SPSATWEMLAT Trigger: TGTGGCCAACATCTCCCACGTGGCTGAAGGGGACAAACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS TCA 72 bp | AGAAATGTCCAGAGATCACAGGTTCAACAGCCGGACTaGGGTCCATGGCTCCGCTGGGAACTGCTTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RNVQRSQVQQPD*GPWLRWELLPR Trigger: TCTGGGAAGCAGTTCCCAGCGGAGCCATGGACCTCAGTCCGGCTGTTGAACCTGTGATCTCTGGACATTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215136.2 |
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| CDS CCA 72 bp | ATATCCATCTTGCTCAAGCAGATGGTGGCTCTGTGCTaGGGTTTGTCCCCTTCAGCCACGTGGGAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: ISILLKQMVALC*GLSPSATWEML Trigger: CAACATCTCCCACGTGGCTGAAGGGGACAAACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGATGGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TCGGAAACTTGGTCGTTTCCCACGAACAGTGTTTCCTaGCAGAAGGGGTTCACGAGGACCATCCCAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SETWSFPTNSVS*QKGFTRTIPVS Trigger: AGACACTGGGATGGTCCTCGTGAACCCCTTCTGCCAGGAAACACTGTTCGTGGGAAACGACCAAGTTTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 72 bp | ACACTGATGGCCACGATGACCCAGGCAATATCCATCTaGCTCAAGCAGATGGTGGCTCTGTGCTGGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: TLMATMTQAISI*LKQMVALCWGL Trigger: CAAACCCCAGCACAGAGCCACCATCTGCTTGAGCAAGATGGATATTGCCTGGGTCATCGTGGCCATCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS TCA 72 bp | GTAGACGTGGTGTCTGTAGGAGGGTGCCCTTCTGGATaGGATACTGTAGTTTCCAGAGTAGCTGCAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VDVVSVGGCPSG*DTVVSRVAAAC Trigger: ACAGGCTGCAGCTACTCTGGAAACTACAGTATCTCATCCAGAAGGGCACCCTCCTACAGACACCACGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | CACTGTAGACGTGGTGTCTGTAGGAGGGTGCCCTTCTaGATGAGATACTGTAGTTTCCAGAGTAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HCRRGVCRRVPF*MRYCSFQSSCS Trigger: GCTGCAGCTACTCTGGAAACTACAGTATCTCATCCAGAAGGGCACCCTCCTACAGACACCACGTCTACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TGGCATTGTTCCAGTAGCTCAGGTTGTTCTCAGGGTTaGCCGTCTTCTTCTTCCTCCTCATGCAGCACACTG | + |
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Preference number: 6 (lower is better) Translates to: WHCSSSSGCSQG*PSSSSSSCSTL Trigger: CAGTGTGCTGCATGAGGAGGAAGAAGAAGACGGCCAACCCTGAGAACAACCTGAGCTACTGGAACAATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CAA 72 bp | CTGGGAGATGGTTCGTGGACAGCGAGTACCAGTGCTTaGGTCAGTGCCAAGGTCAGGAGAAAGCTTAATAGT | + |
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Preference number: 6 (lower is better) Translates to: LGDGSWTASTSA*VSAKVRRKLNS Trigger: ACTATTAAGCTTTCTCCTGACCTTGGCACTGACCAAAGCACTGGTACTCGCTGTCCACGAACCATCTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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| CDS CCA 72 bp | TGGGAGATGGTTCGTGGACAGCGAGTACCAGTGCTTTaGTCAGTGCCAAGGTCAGGAGAAAGCTTAATAGTT | + |
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Preference number: 6 (lower is better) Translates to: WEMVRGQRVPVL*SVPRSGESLIV Trigger: AACTATTAAGCTTTCTCCTGACCTTGGCACTGACCAAAGCACTGGTACTCGCTGTCCACGAACCATCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049452.15 ENSMUST00000189066.2 ENSMUST00000189588.7 |
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