Pregenerated sensors for TMEM107 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020895Ensembl transcript IDs: ENSMUST00000075980.12, ENSMUST00000094081.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCTTCCAACCCAAACACTTGAACCTCCAAACCTTATATGCGGGTaGGTTAGGGTGGGTATGACTCTTCAAAACTCTACCAATTTCACA | + |
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Preference number: 1 (lower is better) Translates to: PLPTQTLEPPNLICG*VRVGMTLQNSTNFT Trigger: TGTGAAATTGGTAGAGTTTTGAAGAGTCATACCCACCCTAACCCACCCGCATATAAGGTTTGGAGGTTCAAGTGTTTGGGTTGGAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAGCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGTCACTTTTCCAGCCTTaGTCCCTACACCCGGATTGT | + |
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Preference number: 2 (lower is better) Translates to: GRSKGLGREKTEASAFFLSLFQP*SLHPDC Trigger: ACAATCCGGGTGTAGGGACCAAGGCTGGAAAAGTGA...CAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGCTCCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR-3UTR CCA 90 bp | AACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGACTTGGGCGATTTTTCTTGCAGCAGTaGGAGGAAGCTTCATCACTT | + |
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Preference number: 2 (lower is better) Translates to: NTAILCLAAVGRSKGLGRFFLQQ*EEASSL Trigger: AAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAA...TCGCCCAAGTCCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGATGGGCGAGAGAAAACTaGAGCCTCTGCCTTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SYSNTAILCLAAVGRSKGWAREN*SLCLFL Trigger: AAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCA...TCCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGCAGATCTTATTCCAACACTaGCATCCTCTGCTTAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: RSKGLGREKTEASAFFLQILFQH*HPLLSR Trigger: GCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGAT...CTGCAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGCAGCCTACACCCGGATTGTaGTCAGAAGGGTTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: RSKGLGREKTEASAFFLQPTPGL*SEGFLF Trigger: AAAAAGAAACCCTTCTGATCACAATCCGGGTGTAGG...CTGCAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR GCA 90 bp | AATCCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCACCTCCAAACCTTATATaGGGGTGGGTTAGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NPRFERSYSNTAILCLAAPPNLI*GWVRVG Trigger: ACCCACCCTAACCCACCCGCATATAAGGTTTGGAGG...TGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR TCA 90 bp | CCACAAGATAAAAGCCTTTATTTATACCAGCCTCTTGGCCCATCCAATGGTCTTTGGGCGAGAGAAAACTaGAGCCTCTGCCTTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PQDKSLYLYQPLGPSNGLWAREN*SLCLFL Trigger: AAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCA...AAGACCATTGGATGGGCCAAGAGGCTGGTATAAATAAAGGCTTTTATCTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTTTTTCAGCCCAAAGACAGCGATGAATAATGCAGTTTCAGTGACAGCTTTTTTCTTGCAGCAGTaGGAGGAAGCTTCATCACTT | + |
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Preference number: 2 (lower is better) Translates to: GFFFSPKTAMNNAVSVTAFFLQQ*EEASSL Trigger: AAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAA...AGCTGTCACTGAAACTGCATTATTCATCGCTGTCTTTGGGCTGAAAAAGAAACC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR CAA 90 bp | AACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGACTTGGGCGAATCACTTTTCCAGCCTaGGTCCCTACACCCGGATTG | + |
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Preference number: 3 (lower is better) Translates to: NTAILCLAAVGRSKGLGRITFPA*VPTPGL Trigger: CAATCCGGGTGTAGGGACCAAGGCTGGAAAAGTGAT...TCGCCCAAGTCCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR-3UTR CAA 90 bp | GAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGCCTCTGCCTTTTTCTaGCAGCAGTGGGAGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: EILFQHCHPLLSRSWEEQASAFF*QQWEEA Trigger: AGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAGGC...TTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR CCA 72 bp | CAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCTTaGTCCCTACACCCGGATTGTGATCAGAAGGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: QQWEEASSLFQP*SLHPDCDQKGF Trigger: GAAACCCTTCTGATCACAATCCGGGTGTAGGGACCAAGGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCATCACTTTTCCAGCCTaGGTCCCTACACCCGGATTG | + |
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Preference number: 3 (lower is better) Translates to: SLCLFLAAVGGSFITFPAITFPA*VPTPGL Trigger: CAATCCGGGTGTAGGGACCAAGGCTGGAAAAGTGAT...GGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| 3UTR TCA 72 bp | TGCTCCCCTCACACGCGGCAAATTAGAAGCGCTATGTaGGATAGTTATTTGCATATCCCCGCCCACTCACTT | + |
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Preference number: 3 (lower is better) Translates to: CSPHTRQIRSAM*DSYLHIPAHSL Trigger: AAGTGAGTGGGCGGGGATATGCAAATAACTATCTCACATAGCGCTTCTAATTTGCCGCGTGTGAGGGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR TCA 72 bp | ATCACTTTTCCAGCCTTGGTCCCTACACCCGGATTGTaGTCAGAAGGGTTTCTTTTTCAGCCCAAAGACAGC | + |
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Preference number: 3 (lower is better) Translates to: ITFPALVPTPGL*SEGFLFQPKDS Trigger: GCTGTCTTTGGGCTGAAAAAGAAACCCTTCTGATCACAATCCGGGTGTAGGGACCAAGGCTGGAAAAGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR GCA 72 bp | CTTCCAACCCAAACACTTGAACCTCCAAACCTTATATaGGGGTGGGTTAGGGTGGGTATGACTCTTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LPTQTLEPPNLI*GWVRVGMTLQN Trigger: GTTTTGAAGAGTCATACCCACCCTAACCCACCCGCATATAAGGTTTGGAGGTTCAAGTGTTTGGGTTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR CCA 72 bp | ACCCAAACACTTGAACCTCCAAACCTTATATGCGGGTaGGTTAGGGTGGGTATGACTCTTCAAAACTCTACC | + |
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Preference number: 3 (lower is better) Translates to: TQTLEPPNLICG*VRVGMTLQNST Trigger: GGTAGAGTTTTGAAGAGTCATACCCACCCTAACCCACCCGCATATAAGGTTTGGAGGTTCAAGTGTTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| 3UTR-3UTR CAA 90 bp | AATCCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCATTCCAACCCAAACACTaGAACCTCCAAACCTTATAT | + |
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Preference number: 3 (lower is better) Translates to: NPRFERSYSNTAILCLAAFQPKH*NLQTLY Trigger: ATATAAGGTTTGGAGGTTCAAGTGTTTGGGTTGGAA...TGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| CDS-3UTR TCA 90 bp | GAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAACAAAGAGGCCCAGGGTaGGACAGAGCGCGGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: EILFQHCHPLLSRSWEEQQRGPG*DRARLP Trigger: TGGTAGCCGCGCTCTGTCTCACCCTGGGCCTCTTTG...TTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR TCA 90 bp | AAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGCAGCAGTGGCAAAGAGGCCCAGGGTaGGACAGAGCGCGGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: KGLGREKTEASAFFLQQWQRGPG*DRARLP Trigger: TGGTAGCCGCGCTCTGTCTCACCCTGGGCCTCTTTG...CCACTGCTGCAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCGCCAGCCAGCTCCACTaGAAAGAGGCCCAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLCLFLAAVGGSFITFPAASQLH*KEAQGE Trigger: CTCACCCTGGGCCTCTTTGCAGTGGAGCTGGCTGGC...GGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR GCA 90 bp | GGAGGAGCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGCCGCGCTACAGTGGGCTaGAATGGAGAGGAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GGARDLGERKLKPLPFSCRATVG*NGEEAL Trigger: CAGAGCCTCCTCTCCATTGCAGCCCACTGTAGCGCG...GCAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGCTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | GCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGACTTGGGCGAGAGAAAAGCGCGGCTACCAGCTaGTTGTCCTGCTTTTCGTAT | + |
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Preference number: 4 (lower is better) Translates to: AILCLAAVGRSKGLGREKSAATS*LSCFSY Trigger: ATACGAAAAGCAGGACAACCAGCTGGTAGCCGCGCT...TTTCTCTCGCCCAAGTCCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | GCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGCAGCAGTAGAGGCAGGCAAGCCTaGATGTTGCTTTCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ARDLGERKLKPLPFSCSSRGRQA*MLLSRD Trigger: GTCCCGGGAAAGCAACATCCAGGCTTGCCTGCCTCT...ACTGCTGCAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCTTGGAGAGGCAGGCAAGCCTaGATGTTGCTTTCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SAFFLQQWEEASSLFQPWRGRQA*MLLSRD Trigger: GTCCCGGGAAAGCAACATCCAGGCTTGCCTGCCTCT...CCAAGGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCTCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGGGCAAGCCTGGATGTTaGTTTCCCGGGACCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: EASAFFLQQWEEASSLFQGKPGC*FPGTRT Trigger: TGTTCTGGTCCCGGGAAAGCAACATCCAGGCTTGCC...CTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAGGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGAGCAAGGGACTTGGGCGAGAGAAAACTGAAGCCTCTGCCTTTTTCTTGATGGAGAGGAGGCTCTaGGTGCTATTGAACATGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRSKGLGREKTEASAFFLMERRL*VLLNME Trigger: CTCCATGTTCAATAGCACCCAGAGCCTCCTCTCCAT...CAAGAAAAAGGCAGAGGCTTCAGTTTTCTCTCGCCCAAGTCCCTTGCTCCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR TCA 90 bp | CTCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCTTGGGCTCTGGGTGCTATTaGACATGGAGACTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LCLFLAAVGGSFITFPALGSGCY*TWRLLR Trigger: TCTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCC...CAAGGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR GCA 90 bp | CCACAAGATAAAAGCCTTTATTTATACCAGCCTCTTGGCCCATCCAATGGTCTTGCCAGCCAGCTCCACTaGAAAGAGGCCCAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PQDKSLYLYQPLGPSNGLASQLH*KEAQGE Trigger: CTCACCCTGGGCCTCTTTGCAGTGGAGCTGGCTGGC...AAGACCATTGGATGGGCCAAGAGGCTGGTATAAATAAAGGCTTTTATCTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | TTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGTTTCAGTGACAGCTaGGAAGGCGCTGCAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FERSYSNTAILCLAAVGRSFSDS*EGAAEG Trigger: ACCTTCTGCAGCGCCTTCCCAGCTGTCACTGAAACT...CCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075980.12 |
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| CDS-3UTR GCA 90 bp | CCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGCAAGCCTGGATGTTaGTTTCCCGGGACCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: PRFERSYSNTAILCLAAVGKPGC*FPGTRT Trigger: TGTTCTGGTCCCGGGAAAGCAACATCCAGGCTTGCC...AACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR TCA 90 bp | AATCCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAATGACAACCACCAGATaGGCCAAGAGCGTCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: NPRFERSYSNTAILCLAAMTTTR*AKSVRN Trigger: GTTCCTGACGCTCTTGGCTCATCTGGTGGTTGTCAT...TGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CCA 90 bp | AATCCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAAGCGCGGCTACCAGCTaGTTGTCCTGCTTTTCGTAT | + |
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Preference number: 4 (lower is better) Translates to: NPRFERSYSNTAILCLAASAATS*LSCFSY Trigger: ATACGAAAAGCAGGACAACCAGCTGGTAGCCGCGCT...TGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR TCA 90 bp | GGTTTCTTTTTCAGCCCAAAGACAGCGATGAATAATGCAGTTTCAGTGACAGCTATGACAACCACCAGATaGGCCAAGAGCGTCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GFFFSPKTAMNNAVSVTAMTTTR*AKSVRN Trigger: GTTCCTGACGCTCTTGGCTCATCTGGTGGTTGTCAT...AGCTGTCACTGAAACTGCATTATTCATCGCTGTCTTTGGGCTGAAAAAGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| CDS TCA 90 bp | ATGTTGCTTTCCCGGGACCAGAACAACGTGATGACAACCACCAGATaGGCCAAGAGCGTCAGGAACCGAGAGGGCACGAGCCCGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: MLLSRDQNNVMTTTR*AKSVRNREGTSPEI Trigger: GATCTCCGGGCTCGTGCCCTCTCGGTTCCTGACGCTCTTGGCTCATCTGGTGGTTGTCATCACGTTGTTCTGGTCCCGGGAAAGCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS TCA 90 bp | ACGCGCTACAGTGGGCTGCAATGGAGAGGAGGCTCTGGGTGCTATTaGACATGGAGACTCCTGAGAGGAAGCCAGCCAGCTCCACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: TRYSGLQWRGGSGCY*TWRLLRGSQPAPLQ Trigger: TTGCAGTGGAGCTGGCTGGCTTCCTCTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCCTCCTCTCCATTGCAGCCCACTGTAGCGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CCA 90 bp | TCCACTGCAAAGAGGCCCAGGGTGAGACAGAGCGCGGCTACCAGCTaGTTGTCCTGCTTTTCGTATTCCTCCGGGGTGAATTTGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: STAKRPRVRQSAATS*LSCFSYSSGVNLRG Trigger: GCCTCTCAAATTCACCCCGGAGGAATACGAAAAGCAGGACAACCAGCTGGTAGCCGCGCTCTGTCTCACCCTGGGCCTCTTTGCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CAA 90 bp | CACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGACTTGGGCGAGAAGGCTCTGGGTGCTATaGAACATGGAGACTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: HCHPLLSRSWEEQGTWARRLWVL*NMETPE Trigger: CTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCCT...TCTCGCCCAAGTCCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CAA 90 bp | ATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTGGGAGGAGCAAGGGTCCTCCGGGGTGAATTaGAGAGGCAGGCAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ILFQHCHPLLSRSWEEQGSSGVN*RGRQAW Trigger: CCAGGCTTGCCTGCCTCTCAAATTCACCCCGGAGGA...CCCTTGCTCCTCCCAACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CAA 90 bp | GGGGAGTTAGAGCCCCTTCCAACCCAAACACTTGAACCTCCAAACCTTATATGCTCCTCCGGGGTGAATTaGAGAGGCAGGCAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GELEPLPTQTLEPPNLICSSGVN*RGRQAW Trigger: CCAGGCTTGCCTGCCTCTCAAATTCACCCCGGAGGA...GCATATAAGGTTTGGAGGTTCAAGTGTTTGGGTTGGAAGGGGCTCTAACTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| CDS-3UTR CAA 90 bp | AGCCTCTGCCTTTTTCTTGCAGCAGTGGGAGGAAGCTTCATCACTTTTCCAGCCAGGCTCTGGGTGCTATaGAACATGGAGACTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SLCLFLAAVGGSFITFPARLWVL*NMETPE Trigger: CTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCCT...GGCTGGAAAAGTGATGAAGCTTCCTCCCACTGCTGCAAGAAAAAGGCAGAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS-3UTR CAA 90 bp | CCAAGATTTGAGAGATCTTATTCCAACACTGCCATCCTCTGCTTAGCCGCAGTTCCCCATTCCAAAATATaGGGTGCTAGGGCACCTGCA | + |
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Preference number: 5 (lower is better) Translates to: PRFERSYSNTAILCLAAVPHSKI*GARAPA Trigger: TGCAGGTGCCCTAGCACCCAATATTTTGGAATGGGG...AACTGCGGCTAAGCAGAGGATGGCAGTGTTGGAATAAGATCTCTCAAATCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094081.5 |
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| CDS TCA 72 bp | GGAAGCCAGCCAGCTCCACTGCAAAGAGGCCCAGGGTaGGACAGAGCGCGGCTACCAGCTGGTTGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSQPAPLQRGPG*DRARLPAGCPA Trigger: AGCAGGACAACCAGCTGGTAGCCGCGCTCTGTCTCACCCTGGGCCTCTTTGCAGTGGAGCTGGCTGGCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS TCA 72 bp | TCCCGGGACCAGAACAACGTGATGACAACCACCAGATaGGCCAAGAGCGTCAGGAACCGAGAGGGCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRDQNNVMTTTR*AKSVRNREGTS Trigger: GCTCGTGCCCTCTCGGTTCCTGACGCTCTTGGCTCATCTGGTGGTTGTCATCACGTTGTTCTGGTCCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CAA 90 bp | GACGCGCTACAGTGGGCTGCAATGGAGAGGAGGCTCTGGGTGCTATaGAACATGGAGACTCCTGAGAGGAAGCCAGCCAGCTCCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: DALQWAAMERRLWVL*NMETPERKPASSTA Trigger: TGCAGTGGAGCTGGCTGGCTTCCTCTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCCTCCTCTCCATTGCAGCCCACTGTAGCGCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CCA 72 bp | AAGAGGCCCAGGGTGAGACAGAGCGCGGCTACCAGCTaGTTGTCCTGCTTTTCGTATTCCTCCGGGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KRPRVRQSAATS*LSCFSYSSGVN Trigger: ATTCACCCCGGAGGAATACGAAAAGCAGGACAACCAGCTGGTAGCCGCGCTCTGTCTCACCCTGGGCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CAA 72 bp | AGGCCCAGGGTGAGACAGAGCGCGGCTACCAGCTGGTaGTCCTGCTTTTCGTATTCCTCCGGGGTGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: RPRVRQSAATSW*SCFSYSSGVNL Trigger: CAAATTCACCCCGGAGGAATACGAAAAGCAGGACAACCAGCTGGTAGCCGCGCTCTGTCTCACCCTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS TCA 72 bp | AGTGGGCTGCAATGGAGAGGAGGCTCTGGGTGCTATTaGACATGGAGACTCCTGAGAGGAAGCCAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGLQWRGGSGCY*TWRLLRGSQPA Trigger: AGCTGGCTGGCTTCCTCTCAGGAGTCTCCATGTTCAATAGCACCCAGAGCCTCCTCTCCATTGCAGCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CAA 90 bp | GCTACCAGCTGGTTGTCCTGCTTTTCGTATTCCTCCGGGGTGAATTaGAGAGGCAGGCAAGCCTGGATGTTGCTTTCCCGGGACCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: ATSWLSCFSYSSGVN*RGRQAWMLLSRDQN Trigger: GTTCTGGTCCCGGGAAAGCAACATCCAGGCTTGCCTGCCTCTCAAATTCACCCCGGAGGAATACGAAAAGCAGGACAACCAGCTGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CCA 72 bp | AATACGAAGAAAGACAGGGCCACAGACGCGCTACAGTaGGCTGCAATGGAGAGGAGGCTCTGGGTGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: NTKKDRATDALQ*AAMERRLWVLL Trigger: CAATAGCACCCAGAGCCTCCTCTCCATTGCAGCCCACTGTAGCGCGTCTGTGGCCCTGTCTTTCTTCGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CCA 72 bp | TATTCCTCCGGGGTGAATTTGAGAGGCAGGCAAGCCTaGATGTTGCTTTCCCGGGACCAGAACAACGTGATG | + |
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Preference number: 6 (lower is better) Translates to: YSSGVNLRGRQA*MLLSRDQNNVM Trigger: CATCACGTTGTTCTGGTCCCGGGAAAGCAACATCCAGGCTTGCCTGCCTCTCAAATTCACCCCGGAGGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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| CDS CAA 72 bp | TGGTTGTCCTGCTTTTCGTATTCCTCCGGGGTGAATTaGAGAGGCAGGCAAGCCTGGATGTTGCTTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: WLSCFSYSSGVN*RGRQAWMLLSR Trigger: CCGGGAAAGCAACATCCAGGCTTGCCTGCCTCTCAAATTCACCCCGGAGGAATACGAAAAGCAGGACAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075980.12 ENSMUST00000094081.5 |
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