Pregenerated sensors for TMEM106B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029571Ensembl transcript IDs: ENSMUST00000031556.14, ENSMUST00000122916.2, ENSMUST00000124234.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGCCTTCTGTGGGGTACAAAGATTGAACTCAGGTCATCAAGCTTaGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: SAFCGVQRLNSGHQA*WPPSSTAAPPCRPL Trigger: AAGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 90 bp | CAGACCACGGGTGACCCCAAAGCTCCCTCATACAGCGAATGCAGGTaGCTGCTAAGGAAAGATGACGAGTGCTTCAAGGGCAGGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: QTTGDPKAPSYSECR*LLRKDDECFKGRVK Trigger: CTTCACCCTGCCCTTGAAGCACTCGTCATCTTTCCTTAGCAGTCACCTGCATTCGCTGTATGAGGGAGCTTTGGGGTCACCCGTGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 90 bp | GCCTTCTGTGGGGTACAAAGATTGAACTCAGGTCATCAAGCTTGGTaGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTTTTT | + |
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Preference number: 1 (lower is better) Translates to: AFCGVQRLNSGHQAW*PPSSTAAPPCRPLF Trigger: AAAAAGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 90 bp | CGAGAAGAGTGCCAGTTCTCTCCGCCTTCTGTGGGGTACAAAGATTaGACTCAGGTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTG | + |
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Preference number: 1 (lower is better) Translates to: REECQFSPPSVGYKD*TQVIKLGGHHPQPL Trigger: CAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCACTCTTCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 90 bp | CGTGAACGGTCATCCGAGAAGAGTGCCAGTTCTCTCCGCCTTCTGTaGGGTACAAAGATTGAACTCAGGTCATCAAGCTTGGTGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: RERSSEKSASSLRLL*GTKIELRSSSLVAT Trigger: GGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCACTCTTCTCGGATGACCGTTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 90 bp | AGGCCTTGTCCACGAACTCTGGCAGAACACAGTGCTCTCCTGGACTaGAATACACATGGAAGGGGCAGAGAAAGTGGCTACTACATGAGG | + |
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Preference number: 1 (lower is better) Translates to: RPCPRTLAEHSALLD*NTHGRGRESGYYMR Trigger: CCTCATGTAGTAGCCACTTTCTCTGCCCCTTCCATGTGTATTTCAGTCCAGGAGAGCACTGTGTTCTGCCAGAGTTCGTGGACAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 90 bp | CAGAAAAGAAAAACCAAACAAACAAAGCCCAGCTTGACTAGAGCGTaGATGACTGCAGAGGGTGCTCTGGGTGTACGGGAAGGGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: QKRKTKQTKPSLTRA*MTAEGALGVREGWP Trigger: TGGCCACCCTTCCCGTACACCCAGAGCACCCTCTGCAGTCATTCACGCTCTAGTCAAGCTGGGCTTTGTTTGTTTGGTTTTTCTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 90 bp | GAAAGTGAGAGTGCAGGAACTGCACAAGGCCCACAGTCTGTCAGCTaGCCCTCGACATCCCAGTGTGAACTTCAGACGTGCTTAATTAAA | + |
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Preference number: 1 (lower is better) Translates to: ESESAGTAQGPQSVS*PSTSQCELQTCLIK Trigger: TTTAATTAAGCACGTCTGAAGTTCACACTGGGATGTCGAGGGTCAGCTGACAGACTGTGGGCCTTGTGCAGTTCCTGCACTCTCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR GCA 90 bp | ATTGAACTCAGGTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTaGCCCACCTTGCCGGCCACTTTTTCAATGTGTAATTGTACTAAC | + |
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Preference number: 1 (lower is better) Translates to: IELRSSSLVATILNR*PTLPATFSMCNCTN Trigger: GTTAGTACAATTACACATTGAAAAAGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 90 bp | CTGAGGAACAGAGCACACATCACAACCAACGGAAGCACTTGGGTATaGGAAACGGAAAACCCAACTTCTGACATAAGAAAACAGAATGCA | + |
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Preference number: 1 (lower is better) Translates to: LRNRAHITTNGSTWV*ETENPTSDIRKQNA Trigger: TGCATTCTGTTTTCTTATGTCAGAAGTTGGGTTTTCCGTTTCCCATACCCAAGTGCTTCCGTTGGTTGTGATGTGTGCTCTGTTCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR GCA 90 bp | CAACATGGTAATGTCTTCATCATGTCCCTGGCTAAGCTCTGGTGGTaGTCATATAAAACTATATTAATACCTACTCTTCCTCCCTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: QHGNVFIMSLAKLWW*SYKTILIPTLPPCP Trigger: CGGGCAGGGAGGAAGAGTAGGTATTAATATAGTTTTATATGAGCACCACCAGAGCTTAGCCAGGGACATGATGAAGACATTACCATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 90 bp | ATGGGGCAACATGGTAATGTCTTCATCATGTCCCTGGCTAAGCTCTaGTGGTGCTCATATAAAACTATATTAATACCTACTCTTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: MGQHGNVFIMSLAKL*WCSYKTILIPTLPP Trigger: GGGAGGAAGAGTAGGTATTAATATAGTTTTATATGAGCACCACCAGAGCTTAGCCAGGGACATGATGAAGACATTACCATGTTGCCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR GCA 90 bp | TGGTGGTGCTCATATAAAACTATATTAATACCTACTCTTCCTCCCTaGCCGAAGTCAGACCTAGCTAAACCAGACCTAAGAAAAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: WWCSYKTILIPTLPP*PKSDLAKPDLRKAQ Trigger: TTGTGCTTTTCTTAGGTCTGGTTTAGCTAGGTCTGACTTCGGGCAGGGAGGAAGAGTAGGTATTAATATAGTTTTATATGAGCACCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 90 bp | GCATTTGTATGTGTCTGTGTGTGCGTGTACTGTACTGTTTGTGAATaGGCATCGACACATTTGTATGTGTGTGTACACTATATATGTGGT | + |
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Preference number: 1 (lower is better) Translates to: AFVCVCVCVYCTVCE*ASTHLYVCVHYICG Trigger: ACCACATATATAGTGTACACACACATACAAATGTGTCGATGCCCATTCACAAACAGTACAGTACACGCACACACAGACACATACAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTGGTGTACGGGAAGGGTaGCCACACACAGACCACGGG | + |
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Preference number: 2 (lower is better) Translates to: SSSLVATILNRCPTLPATGVREG*PHTDHG Trigger: CCCGTGGTCTGTGTGTGGCCACCCTTCCCGTACACC...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR TCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACCACACAGACCACGGGTaGCCCCAAAGCTCCCTCATA | + |
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Preference number: 2 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHHTDHG*PQSSLI Trigger: TATGAGGGAGCTTTGGGGTCACCCGTGGTCTGTGTG...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CAA 90 bp | CTCCGCCTTCTGTGGGGTACAAAGATTGAACTCAGGTCATCAAGCTaGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: LRLLWGTKIELRSSS*VATILNRCPTLPAT Trigger: AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR TCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACCAGAATTTACCCCTGTaGGCATGGGGCAACATGGTA | + |
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Preference number: 2 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHQNLPL*AWGNMV Trigger: TACCATGTTGCCCCATGCTCACAGGGGTAAATTCTG...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACAGCCTGGGGCAGTGCTaGGTTAGTGTAGAACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHSLGQC*VSVEQN Trigger: ATTCTGTTCTACACTAACCCAGCACTGCCCCAGGCT...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACAACACAGTGCTCTCCTaGACTGAAATACACATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHNTVLS*TEIHME Trigger: TTCCATGTGTATTTCAGTCCAGGAGAGCACTGTGTT...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CAA 90 bp | CCGAGAAGAGTGCCAGTTCTCTCCGCCTTCTGTGGGGTACAAAGATaGAACTCAGGTCATCAAGCTTGGTGGCCACCATCCTCAACCGCT | + |
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Preference number: 2 (lower is better) Translates to: PRRVPVLSAFCGVQR*NSGHQAWWPPSSTA Trigger: AGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCACTCTTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CAA 90 bp | GTGCTTCAAGGGCAGGGTGAAGCCGTTAGAGTTTCTGCTTTCCACTaGAGAGCCAGGCTGAGGAACAGAGCACACATCACAACCAACGGA | + |
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Preference number: 2 (lower is better) Translates to: VLQGQGEAVRVSAFH*RARLRNRAHITTNG Trigger: TCCGTTGGTTGTGATGTGTGCTCTGTTCCTCAGCCTGGCTCTCAAGTGGAAAGCAGAAACTCTAACGGCTTCACCCTGCCCTTGAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACGCACTGGAAATTTGCTaGGTGAATAAGGAAAATACT | + |
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Preference number: 2 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHALEIC*VNKENT Trigger: AGTATTTTCCTTATTCACCCAGCAAATTTCCAGTGC...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTCATAAGAAAACAGAATaGACTGGAAATTTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSSLVATILNRCPTLPATHKKTE*TGNLLG Trigger: ACCCAGCAAATTTCCAGTGCATTCTGTTTTCTTATG...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTTGGCTATTGTTCAGCTaGTGTTTGTTCATTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSLVATILNRCPTLPATWLLFS*CLFIWF Trigger: AAACCAAATGAACAAACAGCAGCTGAACAATAGCCA...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGACTGTACTGTCCTGCCTCAGTAGGCCTTGTCCACGAACTCTGGCAGAAAATGCACTGGAAATTTaGTGGGTGAATAAGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KLTVLSCLSRPCPRTLAENALEI*WVNKEN Trigger: ATTTTCCTTATTCACCCAGCAAATTTCCAGTGCATT...TTCTGCCAGAGTTCGTGGACAAGGCCTACTGAGGCAGGACAGTACAGTCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CAA 90 bp | AATAGTTACGAAAAGGTTTTTGAAACTGAATCACTGGGAGTAAAGTaGACTGTACTGTCCTGCCTCAGTAGGCCTTGTCCACGAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: NSYEKVFETESLGVK*TVLSCLSRPCPRTL Trigger: CAGAGTTCGTGGACAAGGCCTACTGAGGCAGGACAGTACAGTCAACTTTACTCCCAGTGATTCAGTTTCAAAAACCTTTTCGTAACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | GGACGAAAGGCTCTTGGTAGGAGCAAATCGTCAACACAGAAAGTGAGAGTGCAGTGTGAACTTCAGACGTaGTTAATTAAAGATGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GRKALGRSKSSTQKVRVQCELQT*LIKDVL Trigger: AAGGACATCTTTAATTAAGCACGTCTGAAGTTCACA...CTGCACTCTCACTTTCTGTGTTGACGATTTGCTCCTACCAAGAGCCTTTCGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGAGGAAAGATGACGAGTaGTTCAAGGGCAGGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKRKDDE*FKGRVK Trigger: CTTCACCCTGCCCTTGAAGCACTCGTCATCTTTCCT...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTCCTACTCTTCCTCCCTaGCCGAAGTCAGACCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: CHLRQDSLSSNFKKFISCPTLPP*PKSDLA Trigger: AGCTAGGTCTGACTTCGGGCAGGGAGGAAGAGTAGG...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CAA 90 bp | AGATGTCTCCATGGCTATTGTTCAGCTGCTGTTTGTTCATTTGGTTaGAGTTTTATTAACTTACAGCTGTTAGCAGCCTGGCTTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: RCLHGYCSAAVCSFG*SFINLQLLAAWLTQ Trigger: CTGGGTAAGCCAGGCTGCTAACAGCTGTAAGTTAATAAAACTCAAACCAAATGAACAAACAGCAGCTGAACAATAGCCATGGAGACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGTCTGGCAGAACACAGTaGTCTCCTGGACTGAAATAC | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKSGRTQ*SPGLKY Trigger: GTATTTCAGTCCAGGAGAGCACTGTGTTCTGCCAGA...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGGGACTGAAATACACATaGAAGGGGCAGAGAAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKGLKYT*KGQRKW Trigger: CCACTTTCTCTGCCCCTTCCATGTGTATTTCAGTCC...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGTTCTGCAGAGATGGATaGATGATGATTTTGCACACC | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKFCRDG*MMILHT Trigger: GGTGTGCAAAATCATCATCCATCCATCTCTGCAGAA...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGGCGATTCTGCAGAGATaGATGGATGATGATTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKAILQR*MDDDFA Trigger: TGCAAAATCATCATCCATCCATCTCTGCAGAATCGC...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGCTGGCTAAGCTCTGGTaGTGCTCATATAAAACTATA | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKLAKLW*CSYKTI Trigger: TATAGTTTTATATGAGCACCACCAGAGCTTAGCCAG...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTTCCCTGGCTAAGCTCTaGTGGTGCTCATATAAAACT | + |
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Preference number: 2 (lower is better) Translates to: CHLRQDSLSSNFKKFISCSLAKL*WCSYKT Trigger: AGTTTTATATGAGCACCACCAGAGCTTAGCCAGGGA...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGTGTACTGTTTGTGAATaGGCATCGACACATTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: ELRNTITSQIIFQLLRVKCTVCE*ASTHLY Trigger: ATACAAATGTGTCGATGCCCATTCACAAACAGTACA...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTTGTGGCCGAATGGTATaGTTGGTAAATATTATGCAA | + |
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Preference number: 2 (lower is better) Translates to: CHLRQDSLSSNFKKFISCCGRMV*LVNIMQ Trigger: TTGCATAATATTTACCAACCATACCATTCGGCCACA...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CAA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACGCAACAGCCAGTGTGTaGTCCACACAGAGCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHATASV*STQSLG Trigger: CCCCAGGCTCTGTGTGGACAACACACTGGCTGTTGC...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 72 bp | GGGGTACAAAGATTGAACTCAGGTCATCAAGCTTGGTaGCCACCATCCTCAACCGCTGCCCCACCTTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: GVQRLNSGHQAW*PPSSTAAPPCR Trigger: CCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CAA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACATGTCTCCATGGCTATaGTTCAGCTGCTGTTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHMSPWL*FSCCLF Trigger: GAACAAACAGCAGCTGAACAATAGCCATGGAGACAT...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR CCA 72 bp | TGTGGGGTACAAAGATTGAACTCAGGTCATCAAGCTTaGTGGCCACCATCCTCAACCGCTGCCCCACCTTGC | + |
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Preference number: 3 (lower is better) Translates to: CGVQRLNSGHQA*WPPSSTAAPPC Trigger: GCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 72 bp | GGTGACCCCAAAGCTCCCTCATACAGCGAATGCAGGTaGCTGCTAAGGAAAGATGACGAGTGCTTCAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GDPKAPSYSECR*LLRKDDECFKG Trigger: GCCCTTGAAGCACTCGTCATCTTTCCTTAGCAGTCACCTGCATTCGCTGTATGAGGGAGCTTTGGGGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR GCA 72 bp | GCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTaGCGGCCACTTTTTCAATGTGTAATTGTACTAACC | + |
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Preference number: 3 (lower is better) Translates to: AWWPPSSTAAPP*RPLFQCVIVLT Trigger: GGTTAGTACAATTACACATTGAAAAAGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR-3UTR CAA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTTTACCCAGGAGTTACTaGATTTTCGTTGAAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SSSLVATILNRCPTLPATLPRSY*IFVEEL Trigger: CAACTCTTCAACGAAAATCAAGTAACTCCTGGGTAA...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| 3UTR TCA 72 bp | CCACGAACTCTGGCAGAACACAGTGCTCTCCTGGACTaGAATACACATGGAAGGGGCAGAGAAAGTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PRTLAEHSALLD*NTHGRGRESGY Trigger: GTAGCCACTTTCTCTGCCCCTTCCATGTGTATTTCAGTCCAGGAGAGCACTGTGTTCTGCCAGAGTTCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | TGCCAGTTCTCTCCGCCTTCTGTGGGGTACAAAGATTaGACTCAGGTCATCAAGCTTGGTGGCCACCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: CQFSPPSVGYKD*TQVIKLGGHHP Trigger: AGGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CCA 72 bp | GGCAGAACACAGTGCTCTCCTGGACTGAAATACACATaGAAGGGGCAGAGAAAGTGGCTACTACATGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRTQCSPGLKYT*KGQRKWLLHEA Trigger: GGCCTCATGTAGTAGCCACTTTCTCTGCCCCTTCCATGTGTATTTCAGTCCAGGAGAGCACTGTGTTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CCA 72 bp | CTTGTCCACGAACTCTGGCAGAACACAGTGCTCTCCTaGACTGAAATACACATGGAAGGGGCAGAGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVHELWQNTVLS*TEIHMEGAEKV Trigger: CACTTTCTCTGCCCCTTCCATGTGTATTTCAGTCCAGGAGAGCACTGTGTTCTGCCAGAGTTCGTGGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | AAAACCAAACAAACAAAGCCCAGCTTGACTAGAGCGTaGATGACTGCAGAGGGTGCTCTGGGTGTACGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KTKQTKPSLTRA*MTAEGALGVRE Trigger: TTCCCGTACACCCAGAGCACCCTCTGCAGTCATTCACGCTCTAGTCAAGCTGGGCTTTGTTTGTTTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CCA 72 bp | TCATCCGAGAAGAGTGCCAGTTCTCTCCGCCTTCTGTaGGGTACAAAGATTGAACTCAGGTCATCAAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSEKSASSLRLL*GTKIELRSSSL Trigger: CAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCACTCTTCTCGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR GCA 72 bp | TACTTATGTCTGACACCAGCCTGCGTCATGAAATTCTaGATCTTTGCAGCTTGCCTGGCATCGCTCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YLCLTPACVMKF*IFAACLASLLL Trigger: AAGAAGGAGCGATGCCAGGCAAGCTGCAAAGATGCAGAATTTCATGACGCAGGCTGGTGTCAGACATAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTGACTGTACTGTCCTGCCTCAGTAGGCCTTGTCCACGAACTCTGGCAGAAGGCCGAATGGTATGGTaGGTAAATATTATGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: KLTVLSCLSRPCPRTLAEGRMVW*VNIMQP Trigger: TGGTTGCATAATATTTACCAACCATACCATTCGGCC...TTCTGCCAGAGTTCGTGGACAAGGCCTACTGAGGCAGGACAGTACAGTCAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGAACCGCTGCCCCACCTaGCCGGCCACTTTTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: ELRNTITSQIIFQLLRVKNRCPT*PATFSM Trigger: CATTGAAAAAGTGGCCGGCAAGGTGGGGCAGCGGTT...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | TGTGTGTACACTATATATGTGGTATTGTACTGTCCGTaGACGGTCATCCGAGAAGAGTGCCAGTTCTCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: CVYTIYVVLYCP*TVIREECQFSP Trigger: CGGAGAGAACTGGCACTCTTCTCGGATGACCGTTCACGGACAGTACAATACCACATATATAGTGTACACACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CCA 72 bp | AGGAACAGAGCACACATCACAACCAACGGAAGCACTTaGGTATGGGAAACGGAAAACCCAACTTCTGACATA | + |
|
Preference number: 3 (lower is better) Translates to: RNRAHITTNGST*VWETENPTSDI Trigger: TATGTCAGAAGTTGGGTTTTCCGTTTCCCATACCCAAGTGCTTCCGTTGGTTGTGATGTGTGCTCTGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | CAGTGCTGGGTTAGTGTAGAACAGAATTTACCCCTGTaGGCATGGGGCAACATGGTAATGTCTTCATCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QCWVSVEQNLPL*AWGNMVMSSSC Trigger: ACATGATGAAGACATTACCATGTTGCCCCATGCTCACAGGGGTAAATTCTGTTCTACACTAACCCAGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR GCA 72 bp | GTTGATTTGAAAAATGTAAGCACAACCAGCCAACTGTaGAGCTTCAAGAATGGAGGTGACCAGCAAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: VDLKNVSTTSQL*SFKNGGDQQAQ Trigger: CTGTGCTTGCTGGTCACCTCCATTCTTGAAGCTGCACAGTTGGCTGGTTGTGCTTACATTTTTCAAATCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGGTTTCTGCTTTCCACTaGAGAGCCAGGCTGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ELRNTITSQIIFQLLRVKVSAFH*RARLRN Trigger: GTTCCTCAGCCTGGCTCTCAAGTGGAAAGCAGAAAC...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR GCA 72 bp | CCAGACCTAAGAAAAGCACAAAGCTTCACTCATAGTTaGAGATGTCTCCATGGCTATTGTTCAGCTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PDLRKAQSFTHS*RCLHGYCSAAV Trigger: AACAGCAGCTGAACAATAGCCATGGAGACATCTGCAACTATGAGTGAAGCTTTGTGCTTTTCTTAGGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | TGCACACCTCACACGTATTTATGGCTAGTGTTCAGCTaGGTAGCCAAACTAAAGACAGTGGTAACTTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CTPHTYLWLVFS*VAKLKTVVTFK Trigger: CTTAAAAGTTACCACTGTCTTTAGTTTGGCTACTCAGCTGAACACTAGCCATAAATACGTGTGAGGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGTGGGCATCGACACATTaGTATGTGTGTGTACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELRNTITSQIIFQLLRVKWASTH*YVCVHY Trigger: ATAGTGTACACACACATACAAATGTGTCGATGCCCA...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR GCA 72 bp | TCATATAAAACTATATTAATACCTACTCTTCCTCCCTaGCCGAAGTCAGACCTAGCTAAACCAGACCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYKTILIPTLPP*PKSDLAKPDLR Trigger: TCTTAGGTCTGGTTTAGCTAGGTCTGACTTCGGGCAGGGAGGAAGAGTAGGTATTAATATAGTTTTATATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR GCA 72 bp | AATGTCTTCATCATGTCCCTGGCTAAGCTCTGGTGGTaGTCATATAAAACTATATTAATACCTACTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NVFIMSLAKLWW*SYKTILIPTLP Trigger: AGGAAGAGTAGGTATTAATATAGTTTTATATGAGCACCACCAGAGCTTAGCCAGGGACATGATGAAGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CCA 72 bp | CATGGTAATGTCTTCATCATGTCCCTGGCTAAGCTCTaGTGGTGCTCATATAAAACTATATTAATACCTACT | + |
|
Preference number: 3 (lower is better) Translates to: HGNVFIMSLAKL*WCSYKTILIPT Trigger: AGTAGGTATTAATATAGTTTTATATGAGCACCACCAGAGCTTAGCCAGGGACATGATGAAGACATTACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGTTTCAATTTTTCACCTaGGGAACAAAGGTGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELRNTITSQIIFQLLRVKFQFFT*GTKVRR Trigger: TCTTCTCACCTTTGTTCCCAAGGTGAAAAATTGAAA...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR TCA 72 bp | TTATCGAATTTAAAGATAAGCGTCAGAGCTCTTCTGTaGAACCTGTTCTCTAAGCAAGCTAAAAACCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LSNLKISVRALL*NLFSKQAKNHT Trigger: TGTGTGGTTTTTAGCTTGCTTAGAGAACAGGTTTCACAGAAGAGCTCTGACGCTTATCTTTAAATTCGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTCCTCCCAGTGTCCTGTaGAGAAATTACATAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHLRQDSLSSNFKKFISCPPSVL*RNYIRK Trigger: TTTTCTTATGTAATTTCTCAACAGGACACTGGGAGG...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTACTGGTACCTTTCCTaGGATATCTGCTCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHYWYLS*DICSEC Trigger: ACACTCTGAGCAGATATCTCAGGAAAGGTACCAGTA...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACATCAATGCCACCAGTTaGTTTTCTTGTCCCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHINATS*FSCPLG Trigger: TCCTAGGGGACAAGAAAACCAACTGGTGGCATTGAT...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTCCAATCACGGTTTTTaGAAACTGGACTTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHSNHGF*KLDLSS Trigger: ACTGCTCAAGTCCAGTTTTCAAAAACCGTGATTGGA...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR GCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTCTTCCGTCTTCGTTGTaGACTTCACTGCTAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVATILNRCPTLPATLPSSL*TSLLTN Trigger: ATTGGTTAGCAGTGAAGTGCACAACGAAGACGGAAG...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTATTCTTCCTGTTCCTTaGCAAGTGGGACAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVATILNRCPTLPATILPVP*QVGQVT Trigger: TGTCACTTGTCCCACTTGCCAAGGAACAGGAAGAAT...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACGTAGCTGACATAGGCTaGTTTTACTCCAATGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHVADIG*FYSNVL Trigger: AAGTACATTGGAGTAAAATCAGCCTATGTCAGCTAC...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | TCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACTACTGGACTTGAGCAGTaGTGTTTTCAACTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVATILNRCPTLPATTGLEQ*CFQLQQ Trigger: CTGTTGAAGTTGAAAACATCACTGCTCAAGTCCAGT...AGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | GTGCCAGTTCTCTCCGCCTTCTGTGGGGTACAAAGATaGAACTCAGGTCATCAAGCTTGGTGGCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLSAFCGVQR*NSGHQAWWPPS Trigger: GGATGGTGGCCACCAAGCTTGATGACCTGAGTTCAATCTTTGTACCCCACAGAAGGCGGAGAGAACTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CCA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACCTGCTTCATATCAAGTaGGCCAATGTTAGTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHLLHIK*ANVSYV Trigger: AACATAACTAACATTGGCCCACTTGATATGAAGCAG...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | AGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTaGCCGGCCACTTTTTCAATGTGTAATTGTACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVATILNRCPT*PATFSMCNCTN Trigger: GTTAGTACAATTACACATTGAAAAAGTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | ATAAGAAAAGCAGACAGAAGAGCAACAGCCAGTGTGTaGTCCACACAGAGCCTGGGGCAGTGCTGGGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRKADRRATASV*STQSLGQCWVS Trigger: ACTAACCCAGCACTGCCCCAGGCTCTGTGTGGACAACACACTGGCTGTTGCTCTTCTGTCTGCTTTTCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR GCA 90 bp | AAGTTGACTGTACTGTCCTGCCTCAGTAGGCCTTGTCCACGAACTCTGGCAGAAATGAGTACTATGTTGTaGACTTTGATGGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLTVLSCLSRPCPRTLAEMSTML*TLMESS Trigger: ACTGCTCTCCATCAAAGTGCACAACATAGTACTCAT...TTCTGCCAGAGTTCGTGGACAAGGCCTACTGAGGCAGGACAGTACAGTCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | AAAGGGCGATTCTGCAGAGATGGATGGATGATGATTTaGCACACCTCACACGTATTTATGGCTAGTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGRFCRDGWMMI*HTSHVFMASVQ Trigger: CTGAACACTAGCCATAAATACGTGTGAGGTGTGCAAAATCATCATCCATCCATCTCTGCAGAATCGCCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | GGCTTACCCAGGAGTTACTTGATTTTCGTTGAAGAGTaGCAGGCTGGGTTTTCAAATGACTCAGGCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: GLPRSYLIFVEE*QAGFSNDSGII Trigger: AATAATGCCTGAGTCATTTGAAAACCCAGCCTGCAACTCTTCAACGAAAATCAAGTAACTCCTGGGTAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | CAAGTTCCAATTGTCCTAATGTTACTTAGACGGTGTTaGGATGTCAACCTCCCACATCCTTTTACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPIVLMLLRRC*DVNLPHPFTLH Trigger: GTGAAGTGTAAAAGGATGTGGGAGGTTGACATCCAAACACCGTCTAAGTAACATTAGGACAATTGGAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGCTTGGCCGTAACCGCTaGTCACTATATGGAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELRNTITSQIIFQLLRVKLGRNR*SLYGIN Trigger: ATTGATTCCATATAGTGATCAGCGGTTACGGCCAAG...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGCCGCTGATCACTATATaGAATCAATGCCACCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRNTITSQIIFQLLRVKPLITI*NQCHQL Trigger: CAACTGGTGGCATTGATTCCATATAGTGATCAGCGG...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR TCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTCTATGTTGTGCACTTTaGTGGAGAGCAGTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHLRQDSLSSNFKKFISCLCCAL*WRAVYR Trigger: TCTGTACACTGCTCTCCATCAAAGTGCACAACATAG...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGGAATACTATCACATCCCAAATCATTTTCCAACTCTTAAGGGTGAAGAGTAAATTCCACATATaGGAACTGAGAGACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELRNTITSQIIFQLLRVKSKFHI*ELRDIS Trigger: GGAGATGTCTCTCAGTTCCCATATGTGGAATTTACT...CTTCACCCTTAAGAGTTGGAAAATGATTTGGGATGTGATAGTATTCCTAAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR GCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTACTATATGGAATCAATaGCACCAGTTGGTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLRQDSLSSNFKKFISCTIWNQ*HQLVFL Trigger: CAAGAAAACCAACTGGTGGCATTGATTCCATATAGT...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| 3UTR CAA 72 bp | AATTCTATTTGTGTTCCTACAGTAATCCCATTGCTGTaGCTTTTATCGAATTTAAAGATAAGCGTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSICVPTVIPLL*LLSNLKISVRA Trigger: AGCTCTGACGCTTATCTTTAAATTCGATAAAAGCAACAGCAATGGGATTACTGTAGGAACACAAATAGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR GCA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTGTTGTTACAGTAACTTaGATCATGAGTACTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLRQDSLSSNFKKFISCVVTVT*IMSTML Trigger: CAACATAGTACTCATGATGCAAGTTACTGTAACAAC...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CAA 90 bp | GTCATCAAGCTTGGTGGCCACCATCCTCAACCGCTGCCCCACCTTGCCGGCCACCCAATGTTAGTTATGTaGTTTAAACGAGCCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VIKLGGHHPQPLPHLAGHPMLVM*FKRAFP Trigger: TGGAAAGGCTCGTTTAAACAACATAACTAACATTGG...GTGGCCGGCAAGGTGGGGCAGCGGTTGAGGATGGTGGCCACCAAGCTTGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CAA 90 bp | GGACGAAAGGCTCTTGGTAGGAGCAAATCGTCAACACAGAAAGTGAGAGTGCAGAATTCTTCCTGTTCCTaGGCAAGTGGGACAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKALGRSKSSTQKVRVQNSSCS*ASGTSD Trigger: GTCACTTGTCCCACTTGCCAAGGAACAGGAAGAATT...CTGCACTCTCACTTTCTGTGTTGACGATTTGCTCCTACCAAGAGCCTTTCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
||
| CDS-3UTR CAA 90 bp | GGACGAAAGGCTCTTGGTAGGAGCAAATCGTCAACACAGAAAGTGAGAGTGCAGCCATCACATACAGCTTaGTTCTTCTTGGCCGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: GRKALGRSKSSTQKVRVQPSHTA*FFLAVT Trigger: GGTTACGGCCAAGAAGAACAAAGCTGTATGTGATGG...CTGCACTCTCACTTTCTGTGTTGACGATTTGCTCCTACCAAGAGCCTTTCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| CDS-3UTR CAA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTAATCAATGCCACCAGTaGGTTTTCTTGTCCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: CHLRQDSLSSNFKKFISCNQCHQ*VFLSPR Trigger: CCTAGGGGACAAGAAAACCAACTGGTGGCATTGATT...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| CDS-3UTR CAA 90 bp | TGTCACCTCAGGCAAGATAGTCTTTCAAGCAATTTCAAGAAATTTATCTCATGTATCATGAGTACTATGTaGTGCACTTTGATGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CHLRQDSLSSNFKKFISCIMSTM*CTLMES Trigger: GCTCTCCATCAAAGTGCACAACATAGTACTCATGAT...ACATGAGATAAATTTCTTGAAATTGCTTGAAAGACTATCTTGCCTGAGGTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| CDS TCA 72 bp | GTGTTCCTTCCACAGTCGACATACTGGTACCTTTCCTaGGATATCTGCTCAGAGTGTCCAAAGTATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VFLPQSTYWYLS*DICSECPKYAV Trigger: AACAGCATACTTTGGACACTCTGAGCAGATATCTCAGGAAAGGTACCAGTATGTCGACTGTGGAAGGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031556.14 |
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| CDS CCA 72 bp | TGGTTTTCTTGTCCCCTAGGAATTCTTCCTGTTCCTTaGCAAGTGGGACAAGTGACACTATCTCTTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: WFSCPLGILPVP*QVGQVTLSLPV Trigger: TACTGGAAGAGATAGTGTCACTTGTCCCACTTGCCAAGGAACAGGAAGAATTCCTAGGGGACAAGAAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031556.14 ENSMUST00000122916.2 ENSMUST00000124234.8 |
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| CDS TCA 72 bp | ATCACATACAGCTTTGTTCTTCTTGGCCGTAACCGCTaGTCACTATATGGAATCAATGCCACCAGTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ITYSFVLLGRNR*SLYGINATSWF Trigger: AAACCAACTGGTGGCATTGATTCCATATAGTGATCAGCGGTTACGGCCAAGAAGAACAAAGCTGTATGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031556.14 ENSMUST00000122916.2 |
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| CDS TCA 72 bp | TATGGTTCGCTTTTCAGCGTCGTAGCTGACATAGGCTaGTTTTACTCCAATGTACTTCACCTCAATAGATCG | + |
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Preference number: 6 (lower is better) Translates to: YGSLFSVVADIG*FYSNVLHLNRS Trigger: CGATCTATTGAGGTGAAGTACATTGGAGTAAAATCAGCCTATGTCAGCTACGACGCTGAAAAGCGAACCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031556.14 ENSMUST00000122916.2 |
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| CDS TCA 72 bp | TATTTAAATATATGGTTCGCTTTTCAGCGTCGTAGCTaGCATAGGCTGATTTTACTCCAATGTACTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: YLNIWFAFQRRS*HRLILLQCTSP Trigger: AGGTGAAGTACATTGGAGTAAAATCAGCCTATGTCAGCTACGACGCTGAAAAGCGAACCATATATTTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031556.14 ENSMUST00000122916.2 |
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