Pregenerated sensors for TMEM106A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034947Ensembl transcript IDs: ENSMUST00000039581.14, ENSMUST00000100403.9, ENSMUST00000107194.8, ENSMUST00000128614.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACAAAGTCCCTACAGTCTTTCCTTGAGCTCCACGGAGCTGAGCTaGAGATCAGCTTGCAGGTGCCTGGAGTCCAGGGGCGGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: QQSPYSLSLSSTELS*RSACRCLESRGGRQ Trigger: CTGTCTGCCGCCCCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAAGGAAAGACTGTAGGGACTTTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR TCA 90 bp | CTGTCACTCTTCAGTCACATCCCAGAGGACAGCAGAGGGTGGGCCTaGTGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCTGGTATC | + |
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Preference number: 1 (lower is better) Translates to: LSLFSHIPEDSRGWA*CRESMRAPQLWPGI Trigger: GATACCAGGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTGTCCTCTGGGATGTGACTGAAGAGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR GCA 90 bp | AGAGCCCCACAGCTTTGGCCTGGTATCAACAGCTTATGTCCTTCATaGTTTCTGAACACTGCCCCTGGGCCTGCTCTACTGCCTGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: RAPQLWPGINSLCPS*FLNTAPGPALLPVL Trigger: TAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTGGGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR TCA 90 bp | CACAGCTTTGGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTaGACACTGCCCCTGGGCCTGCTCTACTGCCTGTCTTACCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: HSFGLVSTAYVLHAF*TLPLGLLYCLSYLC Trigger: ACACAGGTAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR GCA 90 bp | TTGGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTaGCCCTGGGCCTGCTCTACTGCCTGTCTTACCTGTGTGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: LAWYQQLMSFMLSEH*PWACSTACLTCVHS Trigger: TGAGTGCACACAGGTAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 90 bp | TGGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTaGGCCTGCTCTACTGCCTGTCTTACCTGTGTGCACTCACATGGG | + |
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Preference number: 1 (lower is better) Translates to: WYQQLMSFMLSEHCP*ACSTACLTCVHSHG Trigger: CCCATGTGAGTGCACACAGGTAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 90 bp | CCCCTGGGCCTGCTCTACTGCCTGTCTTACCTGTGTGCACTCACATaGGCTCTGGATGGTGGGCTTAGAAACTTTCCTTTAATAAATATC | + |
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Preference number: 1 (lower is better) Translates to: PLGLLYCLSYLCALT*ALDGGLRNFPLINI Trigger: GATATTTATTAAAGGAAAGTTTCTAAGCCCACCATCCAGAGCCCATGTGAGTGCACACAGGTAAGACAGGCAGTAGAGCAGGCCCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 90 bp | AATATCTTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATaGTTTCTCCTCAGCTCCTTGGTTTCTGCTGTGAAGATAGCATTG | + |
|
Preference number: 1 (lower is better) Translates to: NIFATGSAFALGYTR*FLLSSLVSAVKIAL Trigger: CAATGCTATCTTCACAGCAGAAACCAAGGAGCTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAGATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 90 bp | GGTGTAAATCTCCCTTCCTGGAAGCCAGGGATAGTATTCCGAACCTaGGAGGATGAGGACCTTATTGTCTACCATTTACTGAGAGAAGTA | + |
|
Preference number: 1 (lower is better) Translates to: GVNLPSWKPGIVFRT*EDEDLIVYHLLREV Trigger: TACTTCTCTCAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGGAATACTATCCCTGGCTTCCAGGAAGGGAGATTTACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR TCA 90 bp | TCTCCCTTCCTGGAAGCCAGGGATAGTATTCCGAACCTGGGAGGATaGGGACCTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTA | + |
|
Preference number: 1 (lower is better) Translates to: SPFLEARDSIPNLGG*GPYCLPFTERSSLL Trigger: TAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGGAATACTATCCCTGGCTTCCAGGAAGGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 90 bp | GCTGTGAAGATAGCATTGGAGCCAGTCTATAGAGAAGAGTTTAGATaGTGTAAATCTCCCTTCCTGGAAGCCAGGGATAGTATTCCGAAC | + |
|
Preference number: 1 (lower is better) Translates to: AVKIALEPVYREEFR*CKSPFLEARDSIPN Trigger: GTTCGGAATACTATCCCTGGCTTCCAGGAAGGGAGATTTACACCATCTAAACTCTTCTCTATAGACTGGCTCCAATGCTATCTTCACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCCGACTCGTGGGGGAGTaGGGAGGTCTGAGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTRLVGE*GGLRTQ Trigger: CTGAGTCCTCAGACCTCCCCACTCCCCCACGAGTCG...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTCTACTGCCTGTCTTACCTGTGTGCACTCACATGGGCTCTGGATGGTGATTGAAGACCCACCCTaGCGGAGCTGGGTAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: ACSTACLTCVHSHGLWMVIEDPP*RSWVTN Trigger: GTTGGTTACCCAGCTCCGCCAGGGTGGGTCTTCAAT...CACCATCCAGAGCCCATGTGAGTGCACACAGGTAAGACAGGCAGTAGAGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAGGGTGGGCCTGATGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCCACTCACATGGGCTCTaGATGGTGGGCTTAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: QQRVGLMQRIHESPTALAHSHGL*MVGLET Trigger: AGTTTCTAAGCCCACCATCCAGAGCCCATGTGAGTG...GGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATGGTTTCTCCTCAGCTCTCTTCGTTGCGATTaGAGACCCACCCTGGCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FATGSAFALGYTRWFLLSSLRCD*RPTLAE Trigger: CTCCGCCAGGGTGGGTCTTCAATCGCAACGAAGAGA...GCTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCCCTGTCTTACCTGTGTaGACTCACATGGGCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGPVLPV*THMGSG Trigger: TCCAGAGCCCATGTGAGTGCACACAGGTAAGACAGG...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | GGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTGGGCCTGCTAGCTGCAGATCAGCTTaGAGGTGCCTGGAGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GINSLCPSCFLNTAPGPASCRSA*RCLESR Trigger: CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCT...AGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CAA 90 bp | CAGAGGGTGGGCCTGATGCAGAGAATCCATGAGAGCCCCACAGCTTaGGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: QRVGLMQRIHESPTA*AWYQQLMSFMLSEH Trigger: GTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTGGGCCTGCTCCGAACCTGGGAGGATaGGGACCTTATTGTCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: GINSLCPSCFLNTAPGPAPNLGG*GPYCLP Trigger: TGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGG...AGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCAGCTTATGTCCTTCATaGTTTCTGAACACTGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGSLCPS*FLNTAP Trigger: AGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCT...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | GCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGCCTTTAGCTGCAGATCAGCTTaGAGGTGCCTGGAGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: AFFSLQIQFSPTTPPFAFSCRSA*RCLESR Trigger: CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCT...AAAGGCGAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCCACTGCCCCTGGGCCTaGTCTACTGCCTGTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFHCPWA*STACLT Trigger: GGTAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTG...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATGGTTTCTCCTCAGCCCTTGGAAACAGCACTaGATATCCCCAAAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: FATGSAFALGYTRWFLLSPWKQH*ISPKPL Trigger: AAGTGGCTTTGGGGATATCCAGTGCTGTTTCCAAGG...GCTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCAAATATCTTTGCAACTaGCTCTGCCTTTGCTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGKYLCN*LCLCSR Trigger: CCTAGAGCAAAGGCAGAGCCAGTTGCAAAGATATTT...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGCCTTTTCTGAACACTGCCCCTaGGCCTGCTCTACTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AFFSLQIQFSPTTPPFAFSEHCP*ACSTAC Trigger: ACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGA...AAAGGCGAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAGTGACAGGCAAGGAAGGAAATTCTGGTGAATCTGTCACTCTTCAGTCACCGAACCTGGGAGGATaGGGACCTTATTGTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: SVVTGKEGNSGESVTLQSPNLGG*GPYCLP Trigger: TGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGG...TGACTGAAGAGTGACAGATTCACCAGAATTTCCTTCCTTGCCTGTCACTACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTTACCACCATTTCCTTaGATTCTTCTCACTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGLPPFP*ILLTSN Trigger: ATTTGAAGTGAGAAGAATGCAAGGAAATGGTGGTAA...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGGAGGATGAGGACCTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATATTGAAGACCCACCCTaGCGGAGCTGGGTAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: TWEDEDLIVYHLLREVVYIEDPP*RSWVTN Trigger: GTTGGTTACCCAGCTCCGCCAGGGTGGGTCTTCAAT...ATAGACTACTTCTCTCAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGATTCATCCATGCTGCAAAGTCTAGATAAAACTACAGCTTTCTCTTCGTTGGGGAGTGGGGAGGTCTaGGGACTCAGGGACTATGAC | + |
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Preference number: 2 (lower is better) Translates to: KDSSMLQSLDKTTAFSSLGSGEV*GLRDYD Trigger: GTCATAGTCCCTGAGTCCTCAGACCTCCCCACTCCC...CAACGAAGAGAAAGCTGTAGTTTTATCTAGACTTTGCAGCATGGATGAATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCCACTCACATGGGCTCTaGATGGTGGGCTTAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFHSHGL*MVGLET Trigger: AGTTTCTAAGCCCACCATCCAGAGCCCATGTGAGTG...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CAA 90 bp | CGATGGTTTCTCCTCAGCTCCTTGGTTTCTGCTGTGAAGATAGCATaGGAGCCAGTCTATAGAGAAGAGTTTAGATGGTGTAAATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RWFLLSSLVSAVKIA*EPVYREEFRWCKSP Trigger: GGGAGATTTACACCATCTAAACTCTTCTCTATAGACTGGCTCCAATGCTATCTTCACAGCAGAAACCAAGGAGCTGAGGAGAAACCATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGAGAACACACATTTCTaGTCTCCGGCAACAGACATC | + |
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Preference number: 2 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFENTHF*SPATDI Trigger: GATGTCTGTTGCCGGAGAGCAGAAATGTGTGTTCTC...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCTTTGGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGTAAATCTCCCTTCCTaGAAGCCAGGGATAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: PQLWPGINSLCPSCFLNTVNLPS*KPGIVF Trigger: GAATACTATCCCTGGCTTCCAGGAAGGGAGATTTAC...AGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGCCTTTCATCATATCTCCACCTaGAGTCCAGTAGAAAACTGG | + |
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Preference number: 2 (lower is better) Translates to: AFFSLQIQFSPTTPPFAFHHIST*SPVENW Trigger: CCAGTTTTCTACTGGACTCCAGGTGGAGATATGATG...AAAGGCGAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGCCTTTAGAGAAGAGTTTAGATaGTGTAAATCTCCCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AFFSLQIQFSPTTPPFAFREEFR*CKSPFL Trigger: CAGGAAGGGAGATTTACACCATCTAAACTCTTCTCT...AAAGGCGAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGTAGTGACAGGCAAGGAAGGAAATTCTGGTGAATCTGTCACTCTTCAGTCAAAATATCTTTGCAACTaGCTCTGCCTTTGCTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SVVTGKEGNSGESVTLQSKYLCN*LCLCSR Trigger: CCTAGAGCAAAGGCAGAGCCAGTTGCAAAGATATTT...TGACTGAAGAGTGACAGATTCACCAGAATTTCCTTCCTTGCCTGTCACTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCACCCTCATTATCACATaGTCAAAGCAAGACAGTACA | + |
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Preference number: 2 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFTLIIT*SKQDST Trigger: TGTACTGTCTTGCTTTGATCATGTGATAATGAGGGT...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGTAGTGACAGGCAAGGAAGGAAATTCTGGTGAATCTGTCACTCTTCAGTCAAAAGCCACTTATTACTaGGAGGAGAGCTTGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SVVTGKEGNSGESVTLQSKATYY*EESLKK Trigger: CTTTTTCAAGCTCTCCTCCCAGTAATAAGTGGCTTT...TGACTGAAGAGTGACAGATTCACCAGAATTTCCTTCCTTGCCTGTCACTACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCAAGACAGTACAGGAGAACATTTATAGTCACCCAAGGAGACCTTGGAAAAAAGCCACTTATTACTaGGAGGAGAGCTTGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QSKTVQENIYSHPRRPWKKATYY*EESLKK Trigger: CTTTTTCAAGCTCTCCTCCCAGTAATAAGTGGCTTT...TTTCCAAGGTCTCCTTGGGTGACTATAAATGTTCTCCTGTACTGTCTTGCTTTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CAA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCGAGCTGCAGATCAGCTaGCAGGTGCCTGGAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTELQIS*QVPGVQ Trigger: CTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTC...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR TCA 72 bp | AGGACAGCAGAGGGTGGGCCTGATGCAGAGAATCCATaGGAGCCCCACAGCTTTGGCCTGGTATCAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: RTAEGGPDAENP*EPHSFGLVSTA Trigger: AGCTGTTGATACCAGGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR CCA 72 bp | CTCTTCGTTGCGATTGAAGACCCACCCTGGCGGAGCTaGGTAACCAACATGCTCAGTCCCAAGACAACGCCA | + |
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Preference number: 3 (lower is better) Translates to: LFVAIEDPPWRS*VTNMLSPKTTP Trigger: TGGCGTTGTCTTGGGACTGAGCATGTTGGTTACCCAGCTCCGCCAGGGTGGGTCTTCAATCGCAACGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGAGGGTGGGCCTGATGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCTTTCTCCTCAGCTCCTaGGTTTCTGCTGTGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: QQRVGLMQRIHESPTALAFLLSS*VSAVKI Trigger: TATCTTCACAGCAGAAACCAAGGAGCTGAGGAGAAA...GGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| 3UTR TCA 72 bp | TCCATCAGAAGCGACTCGTGGGGGAGTGGGGAGGTCTaGGGACTCAGGGACTATGACATTGTTACAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: SIRSDSWGSGEV*GLRDYDIVTEA Trigger: AGCTTCTGTAACAATGTCATAGTCCCTGAGTCCTCAGACCTCCCCACTCCCCCACGAGTCGCTTCTGATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR TCA 72 bp | GGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTaGACACTGCCCCTGGGCCTGCTCTACTGCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLVSTAYVLHAF*TLPLGLLYCLS Trigger: AGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | GCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATaGTTTCTCCTCAGCTCCTTGGTTTCTGCTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ATGSAFALGYTR*FLLSSLVSAVK Trigger: CTTCACAGCAGAAACCAAGGAGCTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | CAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTaGGCCTGCTCTACTGCCTGTCTTACCTGTGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QLMSFMLSEHCP*ACSTACLTCVH Trigger: GTGCACACAGGTAAGACAGGCAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR GCA 72 bp | CAGCTTTGGCCTGGTATCAACAGCTTATGTCCTTCATaGTTTCTGAACACTGCCCCTGGGCCTGCTCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLWPGINSLCPS*FLNTAPGPALL Trigger: CAGTAGAGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATGGTTTCTCCTCAGTCACCCAAGGAGACCTaGGAAACAGCACTGGATATC | + |
|
Preference number: 3 (lower is better) Translates to: LCNWLCLCSRVHPMVSPQSPKET*ETALDI Trigger: GATATCCAGTGCTGTTTCCAAGGTCTCCTTGGGTGA...CTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | CTCCCTTCCTGGAAGCCAGGGATAGTATTCCGAACCTaGGAGGATGAGGACCTTATTGTCTACCATTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSWKPGIVFRT*EDEDLIVYHLL Trigger: CAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGGAATACTATCCCTGGCTTCCAGGAAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | CTGCTCTACTGCCTGTCTTACCTGTGTGCACTCACATaGGCTCTGGATGGTGGGCTTAGAAACTTTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLYCLSYLCALT*ALDGGLRNFPL Trigger: TAAAGGAAAGTTTCTAAGCCCACCATCCAGAGCCCATGTGAGTGCACACAGGTAAGACAGGCAGTAGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTGGGCCTGCTTCAGGGACTATGACATaGTTACAGAAGCTCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GINSLCPSCFLNTAPGPASGTMT*LQKLCV Trigger: CACACAGAGCTTCTGTAACAATGTCATAGTCCCTGA...AGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR TCA 72 bp | CGTCAGTGTAGTGACAGGCAAGGAAGGAAATTCTGGTaGATCTGTCACTCTTCAGTCACATCCCAGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: RQCSDRQGRKFW*ICHSSVTSQRT Trigger: TGTCCTCTGGGATGTGACTGAAGAGTGACAGATTCACCAGAATTTCCTTCCTTGCCTGTCACTACACTGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR TCA 72 bp | CTGGAAGCCAGGGATAGTATTCCGAACCTGGGAGGATaGGGACCTTATTGTCTACCATTTACTGAGAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEARDSIPNLGG*GPYCLPFTERS Trigger: ACTTCTCTCAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGTTCGGAATACTATCCCTGGCTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | ATGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCTaGTATCAACAGCTTATGTCCTTCATGCTTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: MQRIHESPTALA*YQQLMSFMLSE Trigger: TTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGGAGCTGCAGATCAGCTaGCAGGTGCCTGGAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LIVYHLLREVVYYPHYHMELQIS*QVPGVQ Trigger: CTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTC...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGCTTTGGCCTGGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTTACTGGGAGGAGAGCTaGAAAAAGATTCATCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PQLWPGINSLCPSCFLNTYWEES*KKIHPC Trigger: GCATGGATGAATCTTTTTCAAGCTCTCCTCCCAGTA...AGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACCAGGCCAAAGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR GCA 72 bp | TCCTTTAATAAATATCTTTGCAACTGGCTCTGCCTTTaGTCTAGGGTACACCCGATGGTTTCTCCTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFNKYLCNWLCL*SRVHPMVSPQL Trigger: GAGCTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAGATATTTATTAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | GTACAGGAGAACATTTATAGTCACCCAAGGAGACCTTaGAAACAGCACTGGATATCCCCAAAGCCACTTATT | + |
|
Preference number: 3 (lower is better) Translates to: VQENIYSHPRRP*KQHWISPKPLI Trigger: AATAAGTGGCTTTGGGGATATCCAGTGCTGTTTCCAAGGTCTCCTTGGGTGACTATAAATGTTCTCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CCA 72 bp | ATAGCATTGGAGCCAGTCTATAGAGAAGAGTTTAGATaGTGTAAATCTCCCTTCCTGGAAGCCAGGGATAGT | + |
|
Preference number: 3 (lower is better) Translates to: IALEPVYREEFR*CKSPFLEARDS Trigger: ACTATCCCTGGCTTCCAGGAAGGGAGATTTACACCATCTAAACTCTTCTCTATAGACTGGCTCCAATGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR GCA 72 bp | AAACTTTCCTTTAATAAATATCTTTGCAACTGGCTCTaGCTTTGCTCTAGGGTACACCCGATGGTTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLSFNKYLCNWL*LCSRVHPMVSP Trigger: AGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAGATATTTATTAAAGGAAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGTACTGGGAGGAGAGCTaGAAAAAGATTCATCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LIVYHLLREVVYYPHYHMYWEES*KKIHPC Trigger: GCATGGATGAATCTTTTTCAAGCTCTCCTCCCAGTA...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR TCA 72 bp | TTTACATTTGATGGTTTATACACTCTAATCTCAGCTTaGCTTCCCTGGGTCTCCTTTGGTTTGTACACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FTFDGLYTLISA*LPWVSFGLYTL Trigger: TAAGGTGTACAAACCAAAGGAGACCCAGGGAAGTCAAGCTGAGATTAGAGTGTATAAACCATCAAATGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTCCACGGAGCTGAGCTGCAGATCAGCTTGCAGGTGCCTGGAGTCCAGGTGCTGCTACCAGTGCTaGAGTAGTTGGCAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSTELSCRSACRCLESRCCYQC*SSWQPG Trigger: GCCAGGCTGCCAACTACTTCAGCACTGGTAGCAGCA...CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR TCA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCGGCGGAGGCTGCTGGTaGCCTGGCCTACCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTGGGCW*PGLPQR Trigger: CCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCC...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTCCACGGAGCTGAGCTGCAGATCAGCTTGCAGGTGCCTGGAGTCCAGGCAGCCTGGCTGGCCATaGCTGGGTTATCAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSTELSCRSACRCLESRQPGWP*LGYQVG Trigger: TCCTACCTGATAACCCAGCCATGGCCAGCCAGGCTG...CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAGGGTGGGCCTGATGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCTCGAAGGGCAGCTGTTaGGGATGGCTTAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQRVGLMQRIHESPTALASKGSC*GWLRKE Trigger: CTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGA...GGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTCTACTGCCTGTCTTACCTGTGTGCACTCACATGGGCTCTGGATGGTGCAGCCTGGCTGGCCATaGCTGGGTTATCAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACSTACLTCVHSHGLWMVQPGWP*LGYQVG Trigger: TCCTACCTGATAACCCAGCCATGGCCAGCCAGGCTG...CACCATCCAGAGCCCATGTGAGTGCACACAGGTAAGACAGGCAGTAGAGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAGGGTGGGCCTGATGCAGAGAATCCATGAGAGCCCCACAGCTTTGGCCTGCTTCTCTTGCTCTTaGGGGATCTCCCCATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRVGLMQRIHESPTALACFSCS*GISPLP Trigger: AGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCA...GGCCAAAGCTGTGGGGCTCTCATGGATTCTCTGCATCAGGCCCACCCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCCGGGGCAGCTCCAGGTaGGGCAGGGACATGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTRGSSR*GRDMFS Trigger: AGAAAACATGTCCCTGCCCCACCTGGAGCTGCCCCG...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCTCCACGGAGCTGAGCTGCAGATCAGCTTGCAGGTGCCTGGAGTCCAGGTCAGCTGTGTCACTGTaGTGGGATAGAAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSTELSCRSACRCLESRSAVSL*WDRSCC Trigger: ACAGCAACTTCTATCCCATCACAGTGACACAGCTGA...CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCACACAAAGAGCTTCGTaGGTCTGGGCTTCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGTQRAS*VWASAF Trigger: AAAGGCTGAAGCCCAGACGCACGAAGCTCTTTGTGT...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CAA 72 bp | GGAGTGGGGAGGTCTGAGGACTCAGGGACTATGACATaGTTACAGAAGCTCTGTGTGCTGAGGGTGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGRSEDSGTMT*LQKLCVLRVLG Trigger: CCCTAACACCCTCAGCACACAGAGCTTCTGTAACAATGTCATAGTCCCTGAGTCCTCAGACCTCCCCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCAGGCATACAGGAGTGTaGTGGCTTGCTGCTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTRHTGV*WLAATS Trigger: ACTGGTAGCAGCAAGCCAGCACACTCCTGTATGCCT...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CAA 72 bp | GCTCTAGGGTACACCCGATGGTTTCTCCTCAGCTCCTaGGTTTCTGCTGTGAAGATAGCATTGGAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGYTRWFLLSS*VSAVKIALEPV Trigger: GACTGGCTCCAATGCTATCTTCACAGCAGAAACCAAGGAGCTGAGGAGAAACCATCGGGTGTACCCTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | GGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTGGGCCTGCTAGGCATACAGGAGTGTaGTGGCTTGCTGCTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GINSLCPSCFLNTAPGPARHTGV*WLAATS Trigger: ACTGGTAGCAGCAAGCCAGCACACTCCTGTATGCCT...AGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATGGTTTCTCCTCAGATCTCCCCATTGCCTTaGCAGGTAGGACAAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCNWLCLCSRVHPMVSPQISPLP*QVGQVT Trigger: TGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGAT...CTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR TCA 90 bp | GCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCGCCTTTTGCTGCTACCAGTGCTaGAGTAGTTGGCAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFSLQIQFSPTTPPFAFCCYQC*SSWQPG Trigger: GCCAGGCTGCCAACTACTTCAGCACTGGTAGCAGCA...AAAGGCGAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | GTCACCCAAGGAGACCTTGGAAACAGCACTGGATATCCCCAAAGCCACTTATTAACCAGCTGCTTCTCTTaGTCTTGGGGGATCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTQGDLGNSTGYPQSHLLTSCFS*SWGISP Trigger: TGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGT...TAATAAGTGGCTTTGGGGATATCCAGTGCTGTTTCCAAGGTCTCCTTGGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CAA 72 bp | GGACTTTTCCTTCAACAAAGTCCCTACAGTCTTTCCTaGAGCTCCACGGAGCTGAGCTGCAGATCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLQQSPYSLS*SSTELSCRSAC Trigger: GCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAAGGAAAGACTGTAGGGACTTTGTTGAAGGAAAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCAACAGCTTATGTCCTTCATGCTTTCTGAACACTGCCCCTGGGCCTGCTTCAGCTGTGTCACTGTaGTGGGATAGAAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GINSLCPSCFLNTAPGPASAVSL*WDRSCC Trigger: ACAGCAACTTCTATCCCATCACAGTGACACAGCTGA...AGCAGGCCCAGGGGCAGTGTTCAGAAAGCATGAAGGACATAAGCTGTTGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCGGGACATGTTTTCTCTaGAGTCTACATATTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGGTCFL*SLHIQS Trigger: GCTTTGAATATGTAGACTGCAGAGAAAACATGTCCC...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCCAGGTCAGAGAACCCTaGATATTCAAAAGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTQVREP*IFKRIW Trigger: CCATATTCTTTTGAATATCCAGGGTTCTCTGACCTG...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCATCTCCCCATTGCCTTaGCAGGTAGGACAAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFISPLP*QVGQVT Trigger: TGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGAT...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGCTTGAAAAAGATTCATCCATGCTGCAAAGTCTAGATAAAACTACAACCAGCTGCTTCTCTTaGTCTTGGGGGATCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGELEKDSSMLQSLDKTTTSCFS*SWGISP Trigger: TGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGT...TGTAGTTTTATCTAGACTTTGCAGCATGGATGAATCTTTTTCAAGCTCTCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGCGGGGCAGCTCCAGGTaGGGCAGGGACATGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVYHLLREVVYYPHYHMRGSSR*GRDMFS Trigger: AGAAAACATGTCCCTGCCCCACCTGGAGCTGCCCCG...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| 3UTR CAA 72 bp | CTCCTCAGCTCCTTGGTTTCTGCTGTGAAGATAGCATaGGAGCCAGTCTATAGAGAAGAGTTTAGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSLVSAVKIA*EPVYREEFRWC Trigger: ACACCATCTAAACTCTTCTCTATAGACTGGCTCCAATGCTATCTTCACAGCAGAAACCAAGGAGCTGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR GCA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGTCGAAGGGCAGCTGTTaGGGATGGCTTAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVYHLLREVVYYPHYHMSKGSC*GWLRKE Trigger: CTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGA...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCCAGGTCAGAGAACCCTaGATATTCAAAAGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFQVREP*IFKRIW Trigger: CCATATTCTTTTGAATATCCAGGGTTCTCTGACCTG...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAAGACAGTACAGGAGAACATTTATAGTCACCCAAGGAGACCTTGGAAAATATTCAAAAGAATATaGTGGACTCTGATTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKTVQENIYSHPRRPWKIFKRI*WTLIFG Trigger: GCCGAAAATCAGAGTCCACCATATTCTTTTGAATAT...TTTCCAAGGTCTCCTTGGGTGACTATAAATGTTCTCCTGTACTGTCTTGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR GCA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGGGGACATGTTTTCTCTaGAGTCTACATATTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LIVYHLLREVVYYPHYHMGTCFL*SLHIQS Trigger: GCTTTGAATATGTAGACTGCAGAGAAAACATGTCCC...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CCA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGATATTCAAAAGAATATaGTGGACTCTGATTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LIVYHLLREVVYYPHYHMIFKRI*WTLIFG Trigger: GCCGAAAATCAGAGTCCACCATATTCTTTTGAATAT...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS TCA 90 bp | TCTGCTCACTGGCCAATGGGCCGATGTGCAGGCGGAGGCTGCTGGTaGCCTGGCCTACCACAGAGGCCTGGTGGAGCACCTCGGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SAHWPMGRCAGGGCW*PGLPQRPGGAPRPS Trigger: TGACGGCCGAGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCAGTGAGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 90 bp | TCACTGGCCAATGGGCCGATGTGCAGGCGGAGGCTGCTGGTGACCTaGCCTACCACAGAGGCCTGGTGGAGCACCTCGGCCGTCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SLANGPMCRRRLLVT*PTTEAWWSTSAVSC Trigger: ACAGCTGACGGCCGAGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 90 bp | CAAAATCCTGCTGGCAACTTCGTAAGGCATCTGCTCACTGGCCAATaGGCCGATGTGCAGGCGGAGGCTGCTGGTGACCTGGCCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: QNPAGNFVRHLLTGQ*ADVQAEAAGDLAYH Trigger: GTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCAGTGAGCAGATGCCTTACGAAGTTGCCAGCAGGATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | TTGAGCTCCACGGAGCTGAGCTGCAGATCAGCTTGCAGGTGCCTGGAGTCCAGGAACCAGCTGCTTCTCTaGCTCTTGGGGGATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LSSTELSCRSACRCLESRNQLLL*LLGDLP Trigger: GGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTT...CCTGGACTCCAGGCACCTGCAAGCTGATCTGCAGCTCAGCTCCGTGGAGCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | CCATCAGAAGCGACTCGTGGGGGAGTGGGGAGGTCTGAGGACTCAGGGACTATGGTTACTGTGGAAGAGTaGAGGCCGACAGGACGCACA | + |
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Preference number: 5 (lower is better) Translates to: PSEATRGGVGRSEDSGTMVTVEE*RPTGRT Trigger: TGTGCGTCCTGTCGGCCTCAACTCTTCCACAGTAAC...CATAGTCCCTGAGTCCTCAGACCTCCCCACTCCCCCACGAGTCGCTTCTGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGAAAACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCCAGGAGTGTGCTGGCTaGCTGCTACCAGTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GGKTWCRQDFLSLCVAPGQECAG*LLPVLK Trigger: CTTCAGCACTGGTAGCAGCAAGCCAGCACACTCCTG...GCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTTTTCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | AAGATCCATCAGAAGCGACTCGTGGGGGAGTGGGGAGGTCTGAGGACTCAGGGATCTGGGCTTCAGCCTTaGGTCTCCATAAGGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: KIHQKRLVGEWGGLRTQGSGLQP*VSIRDE Trigger: CTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGA...TCCCTGAGTCCTCAGACCTCCCCACTCCCCCACGAGTCGCTTCTGATGGATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS TCA 90 bp | AGAGCTTCGTGCGTCTGGGCTTCAGCCTTTGGTCTCCATAAGGGATaGGAGCAACCAGCTGCTTCTCTTGCTCTTGGGGGATCTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RASCVWASAFGLHKG*EQPAASLALGGSPH Trigger: ATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGACGCACGAAGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS-3UTR CAA 90 bp | AACTTGGTGCAGACAAGACTTCCTCTCCCTCTGTGTAGCCCCAGGCTAGTTACCGTTACTGTGGAAGAGTaGAGGCCGACAGGACGCACA | + |
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Preference number: 5 (lower is better) Translates to: NLVQTRLPLPLCSPRLVTVTVEE*RPTGRT Trigger: TGTGCGTCCTGTCGGCCTCAACTCTTCCACAGTAAC...GGTAACTAGCCTGGGGCTACACAGAGGGAGAGGAAGTCTTGTCTGCACCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 90 bp | AAAGCTGGAACTAGCAGCCTTTTCATAAGGCATACAGGAGTGTGCTaGCTTGCTGCTACCAGTGCTGAAGTAGTTGGCAGCCTGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KAGTSSLFIRHTGVC*LAATSAEVVGSLAG Trigger: GCCAGCCAGGCTGCCAACTACTTCAGCACTGGTAGCAGCAAGCCAGCACACTCCTGTATGCCTTATGAAAAGGCTGCTAGTTCCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCAACTGGCTCTGCCTTTGCTCTAGGGTACACCCGATGGTTTCTCCTCAGTCAGGTAGGATAGGCTaGTCCTCATCCTTCCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: LCNWLCLCSRVHPMVSPQSGRIG*SSSFRE Trigger: CTCTCGGAAGGATGAGGACAAGCCTATCCTACCTGA...CTGAGGAGAAACCATCGGGTGTACCCTAGAGCAAAGGCAGAGCCAGTTGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | CACCCAAGGAGACCTTGGAAACAGCACTGGATATCCCCAAAGCCACTTATTACTCTGCTTCTCTTGCTCTaGGGGGATCTCCCCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: HPRRPWKQHWISPKPLITLLLLL*GDLPIA Trigger: GGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAG...AGTAATAAGTGGCTTTGGGGATATCCAGTGCTGTTTCCAAGGTCTCCTTGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | GTCACCCAAGGAGACCTTGGAAACAGCACTGGATATCCCCAAAGCCACTTATTATCTGGGCTTCAGCCTTaGGTCTCCATAAGGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: VTQGDLGNSTGYPQSHLLSGLQP*VSIRDE Trigger: CTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGA...TAATAAGTGGCTTTGGGGATATCCAGTGCTGTTTCCAAGGTCTCCTTGGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS TCA 90 bp | TTGCTGTTGAAGATGTTCAGGACATTCGTCGTGTTGAGCTGTACGTaGGCGTCTTCAAAGGTTACTGTGGAAGAGTTGAGGCCGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLKMFRTFVVLSCT*ASSKVTVEELRPTG Trigger: TCCTGTCGGCCTCAACTCTTCCACAGTAACCTTTGAAGACGCTCACGTACAGCTCAACACGACGAATGTCCTGAACATCTTCAACAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS GCA 90 bp | TTTTCTCTGCAGTCTACATATTCAAAGCTCTCGAAGGGCAGCTGTTaGGGATGGCTTAGGAAGGAGCAGGTCAGAGAACCCTGGATATTC | + |
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Preference number: 5 (lower is better) Translates to: FSLQSTYSKLSKGSC*GWLRKEQVREPWIF Trigger: GAATATCCAGGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGAGAGCTTTGAATATGTAGACTGCAGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 90 bp | GGCAGCTGTTGCGGATGGCTTAGGAAGGAGCAGGTCAGAGAACCCTaGATATTCAAAAGAATATGGTGGACTCTGATTTTCGGCCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSCCGWLRKEQVREP*IFKRIWWTLIFGHV Trigger: TACATGGCCGAAAATCAGAGTCCACCATATTCTTTTGAATATCCAGGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGCAACAGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 90 bp | CTGCAGTCTACATATTCAAAGCTCTCGAAGGGCAGCTGTTGCGGATaGCTTAGGAAGGAGCAGGTCAGAGAACCCTGGATATTCAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LQSTYSKLSKGSCCG*LRKEQVREPWIFKR Trigger: TCTTTTGAATATCCAGGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGAGAGCTTTGAATATGTAGACTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | ACCTGGGAGGATGAGGACCTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATCAGGAGTGTGCTGGCTaGCTGCTACCAGTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TWEDEDLIVYHLLREVVYQECAG*LLPVLK Trigger: CTTCAGCACTGGTAGCAGCAAGCCAGCACACTCCTG...ATAGACTACTTCTCTCAGTAAATGGTAGACAATAAGGTCCTCATCCTCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | TTCCTTGCATTCTTCTCACTTCAAATTCAATTTTCCCCAACCACACCGCCCTTCTCAGGTAGGATAGGCTaGTCCTCATCCTTCCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: FLAFFSLQIQFSPTTPPFSGRIG*SSSFRE Trigger: CTCTCGGAAGGATGAGGACAAGCCTATCCTACCTGA...GAAGGGCGGTGTGGTTGGGGAAAATTGAATTTGAAGTGAGAAGAATGCAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS-3UTR CAA 90 bp | CTTATTGTCTACCATTTACTGAGAGAAGTAGTCTATTACCCTCATTATCACATGAACCAGCTGCTTCTCTaGCTCTTGGGGGATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LIVYHLLREVVYYPHYHMNQLLL*LLGDLP Trigger: GGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTT...CATGTGATAATGAGGGTAATAGACTACTTCTCTCAGTAAATGGTAGACAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 72 bp | AATGGGCCGATGTGCAGGCGGAGGCTGCTGGTGACCTaGCCTACCACAGAGGCCTGGTGGAGCACCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: NGPMCRRRLLVT*PTTEAWWSTSA Trigger: GGCCGAGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS TCA 72 bp | TGGCCAATGGGCCGATGTGCAGGCGGAGGCTGCTGGTaGCCTGGCCTACCACAGAGGCCTGGTGGAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: WPMGRCAGGGCW*PGLPQRPGGAP Trigger: AGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 72 bp | CGGAGGCTGCTGGTGACCTGGCCTACCACAGAGGCCTaGTGGAGCACCTCGGCCGTCAGCTGTGTCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: RRLLVTWPTTEA*WSTSAVSCVTV Trigger: CACAGTGACACAGCTGACGGCCGAGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCTCCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 72 bp | AGGCTGCTGGTGACCTGGCCTACCACAGAGGCCTGGTaGAGCACCTCGGCCGTCAGCTGTGTCACTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RLLVTWPTTEAW*STSAVSCVTVM Trigger: CATCACAGTGACACAGCTGACGGCCGAGGTGCTCCACCAGGCCTCTGTGGTAGGCCAGGTCACCAGCAGCCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 72 bp | GCTGGCAACTTCGTAAGGCATCTGCTCACTGGCCAATaGGCCGATGTGCAGGCGGAGGCTGCTGGTGACCTG | + |
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Preference number: 6 (lower is better) Translates to: AGNFVRHLLTGQ*ADVQAEAAGDL Trigger: CAGGTCACCAGCAGCCTCCGCCTGCACATCGGCCCATTGGCCAGTGAGCAGATGCCTTACGAAGTTGCCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS TCA 72 bp | TGCGTCTGGGCTTCAGCCTTTGGTCTCCATAAGGGATaGGAGCAACCAGCTGCTTCTCTTGCTCTTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CVWASAFGLHKG*EQPAASLALGG Trigger: TCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGACGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 72 bp | GTCTCCATAAGGGATGAGAGCAACCAGCTGCTTCTCTaGCTCTTGGGGGATCTCCCCATTGCCTTGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSIRDESNQLLL*LLGDLPIALAG Trigger: ACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 90 bp | ATGAGAGCAACCAGCTGCTTCTCTTGCTCTTGGGGGATCTCCCCATaGCCTTGGCAGGTAGGACAAGTCACAAAGCTGGAACTAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRATSCFSCSWGISP*PWQVGQVTKLELAA Trigger: GGCTGCTAGTTCCAGCTTTGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 90 bp | CACCGACAGGAACACAAAGAGCTTCGTGCGTCTGGGCTTCAGCCTTaGGTCTCCATAAGGGATGAGAGCAACCAGCTGCTTCTCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HRQEHKELRASGLQP*VSIRDESNQLLLLL Trigger: GAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGACGCACGAAGCTCTTTGTGTTCCTGTCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 72 bp | ACCAGCTGCTTCTCTTGCTCTTGGGGGATCTCCCCATaGCCTTGGCAGGTAGGACAAGTCACAAAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSCFSCSWGISP*PWQVGQVTKLE Trigger: TTCCAGCTTTGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 72 bp | ATAAGGGATGAGAGCAACCAGCTGCTTCTCTTGCTCTaGGGGGATCTCCCCATTGCCTTGGCAGGTAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: IRDESNQLLLLL*GDLPIALAGRT Trigger: TGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS GCA 72 bp | CAGTCTACATATTCAAAGCTCTCGAAGGGCAGCTGTTaGGGATGGCTTAGGAAGGAGCAGGTCAGAGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: QSTYSKLSKGSC*GWLRKEQVREP Trigger: GGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGAGAGCTTTGAATATGTAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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| CDS CCA 72 bp | TGCTTCTCTTGCTCTTGGGGGATCTCCCCATTGCCTTaGCAGGTAGGACAAGTCACAAAGCTGGAACTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFSCSWGISPLP*QVGQVTKLELA Trigger: TGCTAGTTCCAGCTTTGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 72 bp | GAACACAAAGAGCTTCGTGCGTCTGGGCTTCAGCCTTaGGTCTCCATAAGGGATGAGAGCAACCAGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EHKELRASGLQP*VSIRDESNQLL Trigger: AAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAAAGGCTGAAGCCCAGACGCACGAAGCTCTTTGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CAA 90 bp | TTGGTCTCCATAAGGGATGAGAGCAACCAGCTGCTTCTCTTGCTCTaGGGGGATCTCCCCATTGCCTTGGCAGGTAGGACAAGTCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVSIRDESNQLLLLL*GDLPIALAGRTSHK Trigger: TTTGTGACTTGTCCTACCTGCCAAGGCAATGGGGAGATCCCCCAAGAGCAAGAGAAGCAGCTGGTTGCTCTCATCCCTTATGGAGACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CCA 72 bp | ACTAGCAGCCTTTTCATAAGGCATACAGGAGTGTGCTaGCTTGCTGCTACCAGTGCTGAAGTAGTTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSLFIRHTGVC*LAATSAEVVGS Trigger: GCTGCCAACTACTTCAGCACTGGTAGCAGCAAGCCAGCACACTCCTGTATGCCTTATGAAAAGGCTGCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 ENSMUST00000107194.8 ENSMUST00000128614.2 |
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| CDS CCA 72 bp | ACATATTCAAAGCTCTCGAAGGGCAGCTGTTGCGGATaGCTTAGGAAGGAGCAGGTCAGAGAACCCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: TYSKLSKGSCCG*LRKEQVREPWI Trigger: TATCCAGGGTTCTCTGACCTGCTCCTTCCTAAGCCATCCGCAACAGCTGCCCTTCGAGAGCTTTGAATATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039581.14 ENSMUST00000100403.9 |
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