Pregenerated sensors for TMEM104 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045980Ensembl transcript IDs: ENSMUST00000061450.7, ENSMUST00000100235.9
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCATCGGGCCTAGTGCGCGCAGGCGTGACCCAACAGGAGGCAGCTaGGAGCCCGGCCTCCTTCCACAGGAATGGTGGTATGCACCCCCT | + |
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Preference number: 1 (lower is better) Translates to: GIGPSARRRDPTGGS*EPGLLPQEWWYAPP Trigger: AGGGGGTGCATACCACCATTCCTGTGGAAGGAGGCCGGGCTCCCAGCTGCCTCCTGTTGGGTCACGCCTGCGCGCACTAGGCCCGATGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR GCA 90 bp | CTGGAGATGCGTAGGGGCAGGGATGCTGGGACCAGAGGTGGCAGGTaGTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LEMRRGRDAGTRGGR*CQWVPHSWQVLHSL Trigger: GAGGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGGTCCCAGCATCCCTGCCCCTACGCATCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GCACAGAAACCAGACAGTGGGGAGGTTGGCTTGGCATCAGTGATGTaGCCAGCCCGTCCCTCCTCCTGCCCAGGCTGGGGCTTCCCTAAC | + |
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Preference number: 1 (lower is better) Translates to: AQKPDSGEVGLASVM*PARPSSCPGWGFPN Trigger: GTTAGGGAAGCCCCAGCCTGGGCAGGAGGAGGGACGGGCTGGCCACATCACTGATGCCAAGCCAACCTCCCCACTGTCTGGTTTCTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GCCTTCTCCGAGAGCCCCAGCCTAGCATGCTCACGTAGACCCGGGTaGCAGCTAAATCCTGCTTTGATGCAGGGAGGCTGGAGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: AFSESPSLACSRRPG*QLNPALMQGGWSWA Trigger: AGCCCAGCTCCAGCCTCCCTGCATCAAAGCAGGATTTAGCTGCCACCCGGGTCTACGTGAGCATGCTAGGCTGGGGCTCTCGGAGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GTCTCCTCCACTGCGGAGGAGGGAGCCAGCCTCCAGTGGCAGGAGTaGAGGAATGTGTGTGACAGCCATGTTCCCGTGCAGGAGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VSSTAEEGASLQWQE*RNVCDSHVPVQESC Trigger: ACAGCTCTCCTGCACGGGAACATGGCTGTCACACACATTCCTCCACTCCTGCCACTGGAGGCTGGCTCCCTCCTCCGCAGTGGAGGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GTCAGCACTGTCTCCTCCACTGCGGAGGAGGGAGCCAGCCTCCAGTaGCAGGAGTGGAGGAATGTGTGTGACAGCCATGTTCCCGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VSTVSSTAEEGASLQ*QEWRNVCDSHVPVQ Trigger: CTGCACGGGAACATGGCTGTCACACACATTCCTCCACTCCTGCCACTGGAGGCTGGCTCCCTCCTCCGCAGTGGAGGAGACAGTGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | CCCTCCTCCTGCCCAGGCTGGGGCTTCCCTAACTTAACTTGGGGGTaGGGAGCGCAGCAGCCGCTGTGTGTGGCTCCAGATTGTCACATA | + |
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Preference number: 1 (lower is better) Translates to: PSSCPGWGFPNLTWG*GAQQPLCVAPDCHI Trigger: TATGTGACAATCTGGAGCCACACACAGCGGCTGCTGCGCTCCCCACCCCCAAGTTAAGTTAGGGAAGCCCCAGCCTGGGCAGGAGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR TCA 90 bp | TCCACGGTAGCCAGGGACCTGGAGAGGGTGGCCACTGAGCACCCATaGCCAGGCTCCAAAGGGCACCACCTTAGTGTTGCAATGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: STVARDLERVATEHP*PGSKGHHLSVAMQP Trigger: AGGCTGCATTGCAACACTAAGGTGGTGCCCTTTGGAGCCTGGTCATGGGTGCTCAGTGGCCACCCTCTCCAGGTCCCTGGCTACCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR GCA 90 bp | GAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTaGACAGCCTCCTGGGTCCTGGGACATCCAACAACACAGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: EVAGAASGSHILGRF*TASWVLGHPTTQQS Trigger: ACTCTGCTGTGTTGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR GCA 90 bp | CCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACCGTGTGGATaGTCAGCTGGGTCTGGAGCTCTAGAGAATGATCGTTCCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: PASGEAQPELLAPCG*SAGSGALENDRSHL Trigger: AAGGTGGGAACGATCATTCTCTAGAGCTCCAGACCCAGCTGAGCATCCACACGGTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | TTCCTCTGCCCCTGGGTCTGGAACCACCAGCTACTTCTCTTCAGCTaGAGCCCCAAGAGACAGCCACTGCCTGTTGCTGAGGCTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: FLCPWVWNHQLLLFS*SPKRQPLPVAEALG Trigger: GCCAAGAGCCTCAGCAACAGGCAGTGGCTGTCTCTTGGGGCTCCAGCTGAAGAGAAGTAGCTGGTGGTTCCAGACCCAGGGGCAGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | TACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTGCACTaGCAGACCAGCATAGGGACGTCTGTCTTCCGTGTGGCTGGAACT | + |
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Preference number: 1 (lower is better) Translates to: YLAHCGTGLPGKMLH*QTSIGTSVFRVAGT Trigger: AGTTCCAGCCACACGGAAGACAGACGTCCCTATGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTaGAACCACCAGCTACTTCTCTTCAGCTGGAGCCCCAAGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: GTLLLRPAAFLCPWV*NHQLLLFSWSPKRQ Trigger: CTGTCTCTTGGGGCTCCAGCTGAAGAGAAGTAGCTGGTGGTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR GCA 90 bp | GGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATTaGTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GMMGSCPLLLRLLLY*FPYLAHCGTGLPGK Trigger: CTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GCTGTCCCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTaGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTGCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: AVPYSCACYCIAFLT*RTVGQGFLGRCCTG Trigger: GCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGGGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GGACTAGGCCCAGGGCTGGGGCAAGTCAGGGTCAGGAGGGATCACTaGTGCTCAAAGCAGAAGGCACATCGAAAATGCAGTTCATCACTC | + |
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Preference number: 1 (lower is better) Translates to: GLGPGLGQVRVRRDH*CSKQKAHRKCSSSL Trigger: GAGTGATGAACTGCATTTTCGATGTGCCTTCTGCTTTGAGCACCAGTGATCCCTCCTGACCCTGACTTGCCCCAGCCCTGGGCCTAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | ACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTaGGACAGGGCTTCCTGGGAAGATGCTGCACTGGCAGACCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: TPAPATVLLSLLGAL*DRASWEDAALADQH Trigger: ATGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GACATAGGACTCCTCTCAGGGACCCAAGCAAAGGGCTCTAAACCCTaGGGAAGGATGCTTCATCTGTCTGCTGTTGCCAGAGCCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: DIGLLSGTQAKGSKP*GRMLHLSAVARARH Trigger: GTGTCTGGCTCTGGCAACAGCAGACAGATGAAGCATCCTTCCCCAGGGTTTAGAGCCCTTTGCTTGGGTCCCTGAGAGGAGTCCTATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CCA 90 bp | GCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCCTCCTaGGTCCTGGGACATCCAACAACACAGCAGAGTTCGAGCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: AASGSHILGRFCTAS*VLGHPTTQQSSSFK Trigger: TTTAAAGCTCGAACTCTGCTGTGTTGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR GCA 90 bp | GACCTAACGTATCACCTTACCCAGGTGATATACAAATATTTAGTGTaGTCGATGCCTGTGTGTGTGTGGGAGGGGGTGACAACAAATGAT | + |
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Preference number: 1 (lower is better) Translates to: DLTYHLTQVIYKYLV*SMPVCVWEGVTTND Trigger: ATCATTTGTTGTCACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACCTGGGTAAGGTGATACGTTAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCAGAAAGATGGCAGTGACAGCCCGTCCCTCCTCCTaGCCAGGCTGGGGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TCPALGTGPGQGRKMAVTARPSS*PGWGFP Trigger: AGGGAAGCCCCAGCCTGGGCAGGAGGAGGGACGGGC...TGTCACTGCCATCTTTCTGCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAGCCACTGAGCACCCATaGCCAGGCTCCAAAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAATEHP*PGSKGH Trigger: GTGCCCTTTGGAGCCTGGTCATGGGTGCTCAGTGGC...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCAGCCCGTCCCTCCTCCTaGCCAGGCTGGGGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GLLAVLWTTNPRASMQMPARPSS*PGWGFP Trigger: AGGGAAGCCCCAGCCTGGGCAGGAGGAGGGACGGGC...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCCAGGGAAGAGGGCCTTaGCCTTCCAAGCAGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MIVPTLTCPALGTGPGQGQGRGP*PSKQVR Trigger: CCTGACCTGCTTGGAAGGGCAAGGCCCTCTTCCCTG...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAGCAATGCAGCCTGGCTaGAAGCTGGGCTGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAAMQPG*KLGCLT Trigger: TGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGC...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGGAGAGGGTGGCCACTaGGCACCCATGACCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYGEGGH*APMTRL Trigger: GAGCCTGGTCATGGGTGCTCAGTGGCCACCCTCTCC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCAGAAAGATGGCAGTGACAGCTGGGTGGGCTCCTTaGTGTCCTCTGGACCACGAA | + |
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Preference number: 2 (lower is better) Translates to: TCPALGTGPGQGRKMAVTAGWAP*CPLDHE Trigger: TTCGTGGTCCAGAGGACAGCAAGGAGCCCACCCAGC...TGTCACTGCCATCTTTCTGCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGACACCTTGACCTGCCCTaGCCTCGGGACGGGTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGHLDLP*PRDGSG Trigger: CCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTG...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCACCAACAGGAGGCAGCTaGGAGCCCGGCCTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GLLAVLWTTNPRASMQMPPTGGS*EPGLLP Trigger: TGGAAGGAGGCCGGGCTCCCAGCTGCCTCCTGTTGG...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCCCCAACAGGAGGCAGCTaGGAGCCCGGCCTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EVAGAASGSHILGRFCTAPTGGS*EPGLLP Trigger: TGGAAGGAGGCCGGGCTCCCAGCTGCCTCCTGTTGG...GGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACTGCTGGGACCAGAGGTaGCAGGTGCTGCCAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: AICPIYQPQVRHSQSSWHCWDQR*QVLPVG Trigger: ACCCACTGGCAGCACCTGCCACCTCTGGTCCCAGCA...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAAGTCAGACAGGAATGGTGGTATaGACCCCCTCCAGCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: EAVLSRRGGTRPRAGASQTGMVV*TPSSST Trigger: CGTGGAGCTGGAGGGGGTGCATACCACCATTCCTGT...CTGACTTGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCAGAAAGATGGCAGTGACAGTCCTCTCCTCTCTGTaGCCAACACTCCTGGCTACC | + |
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Preference number: 2 (lower is better) Translates to: TCPALGTGPGQGRKMAVTVLSSL*PTLLAT Trigger: GGTAGCCAGGAGTGTTGGGCACAGAGAGGAGAGGAC...TGTCACTGCCATCTTTCTGCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCACTCCAGTGGCAGGAGTaGAGGAATGTGTGTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: TPEAVLSRRGGTRPRAGALQWQE*RNVCDS Trigger: GCTGTCACACACATTCCTCCACTCCTGCCACTGGAG...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCTTACTTGGCGCACTGTaGGACAGGGCTTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MIVPTLTCPALGTGPGQGLLGAL*DRASWE Trigger: TTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAA...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CAA 90 bp | GGTGGAGATGAAGGAGCACAGAAACCAGACAGTGGGGAGGTTGGCTaGGCATCAGTGATGTGGCCAGCCCGTCCCTCCTCCTGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGDEGAQKPDSGEVG*ASVMWPARPSSCPG Trigger: GCCTGGGCAGGAGGAGGGACGGGCTGGCCACATCACTGATGCCAAGCCAACCTCCCCACTGTCTGGTTTCTGTGCTCCTTCATCTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGCAAGCTGGGCTGCCTaGCACCAGCCTGACCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYASWAA*HQPDLL Trigger: CAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACGGAGAGGGTGGCCACTaGGCACCCATGACCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNGEGGH*APMTRL Trigger: GAGCCTGGTCATGGGTGCTCAGTGGCCACCCTCTCC...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGGTGGAGCAAGGCACTaGAATCAAGAGGGAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYGGARH*NQEGGG Trigger: GCCCCCTCCCTCTTGATTTCAGTGCCTTGCTCCACC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGCTGTAAGAAGCTGCAGCCTGGCCCACCTCCATCTGGAGATGCGTAGGCACTGTCTCCTCCACTaGGGAGGAGGGAGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GTAVRSCSLAHLHLEMRRHCLLH*GGGSQP Trigger: AGGCTGGCTCCCTCCTCCGCAGTGGAGGAGACAGTG...CCTACGCATCTCCAGATGGAGGTGGGCCAGGCTGCAGCTTCTTACAGCTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACGGCTTCCTGGGAAGATaGTGCACTGGCAGACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AICPIYQPQVRHSQSSWHGFLGR*CTGRPA Trigger: TGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCC...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAGTCAGGAGGGATCACTaGTGCTCAAAGCAGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAVRRDH*CSKQKA Trigger: TGCCTTCTGCTTTGAGCACCAGTGATCCCTCCTGAC...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCGTTCCCTCACGAGGGTaGAGCAAGGCACTGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: MIVPTLTCPALGTGPGQGVPSRG*SKALKS Trigger: TGATTTCAGTGCCTTGCTCCACCCTCGTGAGGGAAC...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCAACCCTGGGGAAGGATaGTTCATCTGTCTGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: MIVPTLTCPALGTGPGQGNPGEG*FICLLL Trigger: CAACAGCAGACAGATGAAGCATCCTTCCCCAGGGTT...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCCGCCTGCTACTGTATTaGTTTCCTTACTTGGCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: MIVPTLTCPALGTGPGQGRLLLY*FPYLAH Trigger: GTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCG...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACAGCAACTGTCAGGATTaGCAGGGAAGAGGGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: AICPIYQPQVRHSQSSWHSNCQD*QGRGPC Trigger: GCAAGGCCCTCTTCCCTGCCAATCCTGACAGTTGCT...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAGCTCCTGGCACCGTGTaGATGCTCAGCTGGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGAPGTV*MLSWVW Trigger: CCAGACCCAGCTGAGCATCCACACGGTGCCAGGAGC...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGTCACTCCTGCTAGTGGATGGTTaGGGATGCGGTAGGGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WLQAGLPDTSLTFCRESLLLVDG*GCGRGH Trigger: GTGCCCCCTACCGCATCCTCAACCATCCACTAGCAG...GAGTGACTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGACAGGGAAGAGGGCCTTaGCCTTCCAAGCAGGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGQGRGP*PSKQVR Trigger: CCTGACCTGCTTGGAAGGGCAAGGCCCTCTTCCCTG...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAGCAATGCAGCCTGGCTaGAAGCTGGGCTGCCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGAMQPG*KLGCLT Trigger: TGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGC...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGACAGGGAGGCTGGAGCTaGGCTGTTTCTGCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGQGGWS*AVSASC Trigger: ACAGGAGGCAGAAACAGCCCAGCTCCAGCCTCCCTG...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGCCAGACACTCTCGCAGGCTCTTGCCTAGAGACCCTGGTGCCAATTAGCCAGGGAGGCTGGAGCTaGGCTGTTTCTGCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PEPDTLAGSCLETLVPISQGGWS*AVSASC Trigger: ACAGGAGGCAGAAACAGCCCAGCTCCAGCCTCCCTG...GCTAATTGGCACCAGGGTCTCTAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACGGAGAAGTCAGCAGCTaGAGACGTAGAAGGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AICPIYQPQVRHSQSSWHGEVSS*RRRRPS Trigger: AGAAGGCCTTCTACGTCTCCAGCTGCTGACTTCTCC...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACGTGAGGACAGCTGTGTaGCTTTGGGCCTGGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNVRTAV*LWAWPG Trigger: ACCAGGCCAGGCCCAAAGCCACACAGCTGTCCTCAC...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAGTCCTCTCCTCTCTGTaGCCAACACTCCTGGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGVLSSL*PTLLAT Trigger: GGTAGCCAGGAGTGTTGGGCACAGAGAGGAGAGGAC...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGGAGAAGTCAGCAGCTaGAGACGTAGAAGGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYGEVSS*RRRRPS Trigger: AGAAGGCCTTCTACGTCTCCAGCTGCTGACTTCTCC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAATTCAGGGGGTCCCTaGGCTCCAAAGGAGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCNSGGP*APKEKP Trigger: TGGCTTCTCCTTTGGAGCCCAGGGACCCCCTGAATT...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGTTCCCTCACGAGGGTaGAGCAAGGCACTGAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYVPSRG*SKALKS Trigger: TGATTTCAGTGCCTTGCTCCACCCTCGTGAGGGAAC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGATGGGACAGGGCTTCCTaGGAAGATGCTGCACTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGWDRAS*EDAALA Trigger: TGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCA...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACAGCCATGTTCCCGTaGAGGAGAGCTGTCCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGTAMFP*RRAVLH Trigger: ATGCAGGACAGCTCTCCTGCACGGGAACATGGCTGT...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACATTCTTGGCAGGTTCTaGACAGCCTCCTGGGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNILGRF*TASWVL Trigger: CAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAAT...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATAAGGGCTCTAAACCCTaGGGAAGGATGCTTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYKGSKP*GRMLHL Trigger: CAGATGAAGCATCCTTCCCCAGGGTTTAGAGCCCTT...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR CAA 90 bp | AGCTGTCCCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTaGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: SCPLLLRLLLYCFPY*AHCGTGLPGKMLHW Trigger: CCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGGGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 90 bp | AGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATaGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RDDGQLSLTPAPATV*LSLLGALWDRASWE Trigger: TTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGTCACTCGAGCTGGGCTGTTTCTaGCTCCTGTTGTCAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: WLQAGLPDTSLTFCRESLELGCF*LLLSDT Trigger: TGTGTCTGACAACAGGAGGCAGAAACAGCCCAGCTC...GAGTGACTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGATGCTTCATCTGTCTaGTGTTGCCAGAGCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: PEVAGAASGSHILGRFCTDASSV*CCQSQT Trigger: TGTCTGGCTCTGGCAACAGCAGACAGATGAAGCATC...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCGATGCTTCATCTGTCTaGTGTTGCCAGAGCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCDASSV*CCQSQT Trigger: TGTCTGGCTCTGGCAACAGCAGACAGATGAAGCATC...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAACCCTGGGGAAGGATaGTTCATCTGTCTGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCNPGEG*FICLLL Trigger: CAACAGCAGACAGATGAAGCATCCTTCCCCAGGGTT...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAACCTCCATCTGGAGATaGGTAGGGGCAGGGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSTSIWR*VGAGML Trigger: CAGCATCCCTGCCCCTACGCATCTCCAGATGGAGGT...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAAGACAGTGGGGAGGTTaGCTTGGCATCAGTGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: CLALYSLDRQPSSAPGSGRQWGG*LGISDV Trigger: CACATCACTGATGCCAAGCCAACCTCCCCACTGTCT...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGAGCAAGCTGGGCTGCCTaGCACCAGCCTGACCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRASWAA*HQPDLL Trigger: CAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGC...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACGGGGGTGACAACAAATaGTACCCACAAATGCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNGGDNK*YPQMLP Trigger: GGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCC...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGGTGGCAGCTAAATCCTaGTTTGATGCAGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGVAAKS*FDAGRL Trigger: CAGCCTCCCTGCATCAAAGCAGGATTTAGCTGCCAC...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCTAGCAGGTCAGACAATAGGTGGAGATGAAGGAGCACAGAAACCAGACCACTGTCTCCTCCACTaGGGAGGAGGGAGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLLAGQTIGGDEGAQKPDHCLLH*GGGSQP Trigger: AGGCTGGCTCCCTCCTCCGCAGTGGAGGAGACAGTG...GTCTGGTTTCTGTGCTCCTTCATCTCCACCTATTGTCTGACCTGCTAGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACCAGAGAGTCACTCTGTaGTCTCCCTGTTGTAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNQRVTL*SPCCKS Trigger: GGACTTACAACAGGGAGAGCACAGAGTGACTCTCTG...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAATTCTTGGCAGGTTCTaGACAGCCTCCTGGGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSILGRF*TASWVL Trigger: CAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAAT...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCATTCTGCACAGCCTCCTaGGTCCTGGGACATCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSFCTAS*VLGHPT Trigger: TGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAA...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGAACCTCCATCTGGAGATaGGTAGGGGCAGGGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRTSIWR*VGAGML Trigger: CAGCATCCCTGCCCCTACGCATCTCCAGATGGAGGT...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAAGGAGAGCCAGGGACTaGAATTCACCTTTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSRRARD*NSPLRR Trigger: CCTCCTCAAAGGTGAATTCCAGTCCCTGGCTCTCCT...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACAGCAACTGTCAGGATTaGCAGGGAAGAGGGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHSNCQD*QGRGPC Trigger: GCAAGGCCCTCTTCCCTGCCAATCCTGACAGTTGCT...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTAGCAGGTCAGACAATAGGTGGAGATGAAGGAGCACAGAAACCAGACAACTTAACTTGGGGGTaGGGAGCGCAGCAGCCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WLLAGQTIGGDEGAQKPDNLTWG*GAQQPL Trigger: CAGCGGCTGCTGCGCTCCCCACCCCCAAGTTAAGTT...GTCTGGTTTCTGTGCTCCTTCATCTCCACCTATTGTCTGACCTGCTAGAAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTTTGGCTTGGCATCAGTaGTGTGGCCAGCCCGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGLAWHQ*CGQPVP Trigger: AGGGACGGGCTGGCCACATCACTGATGCCAAGCCAA...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACGAGCTGGGCTGTTTCTaGCTCCTGTTGTCAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHELGCF*LLLSDT Trigger: TGTGTCTGACAACAGGAGGCAGAAACAGCCCAGCTC...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTAGCAGGTCAGACAATAGGTGGAGATGAAGGAGCACAGAAACCAGACTTGATGCAGGGAGGCTaGAGCTGGGCTGTTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WLLAGQTIGGDEGAQKPDLMQGG*SWAVSA Trigger: GGCAGAAACAGCCCAGCTCCAGCCTCCCTGCATCAA...GTCTGGTTTCTGTGCTCCTTCATCTCCACCTATTGTCTGACCTGCTAGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTTCACGTAGACCCGGGTaGCAGCTAAATCCTGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VLLSLLGALWDRASWEDASRRPG*QLNPAL Trigger: CAAAGCAGGATTTAGCTGCCACCCGGGTCTACGTGA...AGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGACTCCAGTGGCAGGAGTaGAGGAATGTGTGTGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRLQWQE*RNVCDS Trigger: GCTGTCACACACATTCCTCCACTCCTGCCACTGGAG...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAAAGGGCTCTAAACCCTaGGGAAGGATGCTTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSKGSKP*GRMLHL Trigger: CAGATGAAGCATCCTTCCCCAGGGTTTAGAGCCCTT...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATTCTGCACAGCCTCCTaGGTCCTGGGACATCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRFCTAS*VLGHPT Trigger: TGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAA...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACCAGAGAGTCACTCTGTaGTCTCCCTGTTGTAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHQRVTL*SPCCKS Trigger: GGACTTACAACAGGGAGAGCACAGAGTGACTCTCTG...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACACCAGCCTGACCTTTTaGAGAGAGTCACTCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHTSLTF*RESLCA Trigger: AGCACAGAGTGACTCTCTGCAAAAGGTCAGGCTGGT...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTGGCTTCCTGGGAAGATaGTGCACTGGCAGACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGGFLGR*CTGRPA Trigger: TGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCC...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTTGCATGGTGACGTCCTaGGTGGGGAGAAGTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGCMVTS*VGRSQQ Trigger: CTGCTGACTTCTCCCCACCCAGGACGTCACCATGCA...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTAGCAGGTCAGACAATAGGTGGAGATGAAGGAGCACAGAAACCAGACAATTCAGGGGGTCCCTaGGCTCCAAAGGAGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WLLAGQTIGGDEGAQKPDNSGGP*APKEKP Trigger: TGGCTTCTCCTTTGGAGCCCAGGGACCCCCTGAATT...GTCTGGTTTCTGTGCTCCTTCATCTCCACCTATTGTCTGACCTGCTAGAAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACCGTCTGTCTTCCGTGTaGCTGGAACTATTGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHRLSSV*LELLMW Trigger: CCACATCAATAGTTCCAGCCACACGGAAGACAGACG...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAAGGCACATCGAAAATGCAGTTCATCACTCACTCATCATTCCAAGGCATCTTGATGCAGGGAGGCTaGAGCTGGGCTGTTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AEGTSKMQFITHSSFQGILMQGG*SWAVSA Trigger: GGCAGAAACAGCCCAGCTCCAGCCTCCCTGCATCAA...GATGCCTTGGAATGATGAGTGAGTGATGAACTGCATTTTCGATGTGCCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTGTGGCAGCTAAATCCTaGTTTGATGCAGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGVAAKS*FDAGRL Trigger: CAGCCTCCCTGCATCAAAGCAGGATTTAGCTGCCAC...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTAATGATACCCACAAATaGTACCCCCACCCCCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGNDTHK*YPHPQS Trigger: GGACTGGGGGTGGGGGTAGCATTTGTGGGTATCATT...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGTTGCAGTGGGAAGATTTAATTTGCTTTGTCCTTAAGCAAGAGGGAGAACTGCTAGTGGATGGTTaGGGATGCGGTAGGGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CVLQWEDLICFVLKQEGELLVDG*GCGRGH Trigger: GTGCCCCCTACCGCATCCTCAACCATCCACTAGCAG...TTCTCCCTCTTGCTTAAGGACAAAGCAAATTAAATCTTCCCACTGCAACACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAAGGCACATCGAAAATGCAGTTCATCACTCACTCATCATTCCAAGGCATCAGGAGAGCCAGGGACTaGAATTCACCTTTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AEGTSKMQFITHSSFQGIRRARD*NSPLRR Trigger: CCTCCTCAAAGGTGAATTCCAGTCCCTGGCTCTCCT...GATGCCTTGGAATGATGAGTGAGTGATGAACTGCATTTTCGATGTGCCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGTTGCAGTGGGAAGATTTAATTTGCTTTGTCCTTAAGCAAGAGGGAGAATGCATGGTGACGTCCTaGGTGGGGAGAAGTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CVLQWEDLICFVLKQEGECMVTS*VGRSQQ Trigger: CTGCTGACTTCTCCCCACCCAGGACGTCACCATGCA...TTCTCCCTCTTGCTTAAGGACAAAGCAAATTAAATCTTCCCACTGCAACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTGTGTGTGTGTTGCAGTaGGAAGATTTAATTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GDIQIFSVLDACVCVGGGVCVLQ*EDLICF Trigger: AAAGCAAATTAAATCTTCCCACTGCAACACACACAC...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | GTGATGTGGCCAGCCCGTCCCTCCTCCTGCCCAGGCTaGGGCTTCCCTAACTTAACTTGGGGGTGGGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: VMWPARPSSCPG*GFPNLTWGWGA Trigger: CGCTCCCCACCCCCAAGTTAAGTTAGGGAAGCCCCAGCCTGGGCAGGAGGAGGGACGGGCTGGCCACATCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GAGACTCGGATCTGGGGCCAGGCTGGGTGGGCTCCTTaGTGTCCTCTGGACCACGAACCCCAGGGCCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ETRIWGQAGWAP*CPLDHEPQGLY Trigger: ATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCCACCCAGCCTGGCCCCAGATCCGAGTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CCTAGTGCGCGCAGGCGTGACCCAACAGGAGGCAGCTaGGAGCCCGGCCTCCTTCCACAGGAATGGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSARRRDPTGGS*EPGLLPQEWWY Trigger: ATACCACCATTCCTGTGGAAGGAGGCCGGGCTCCCAGCTGCCTCCTGTTGGGTCACGCCTGCGCGCACTAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | CGTAGGGGCAGGGATGCTGGGACCAGAGGTGGCAGGTaGTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRGRDAGTRGGR*CQWVPHSWQVL Trigger: CAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGGTCCCAGCATCCCTGCCCCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | TGCCCAGGCTGGGGCTTCCCTAACTTAACTTGGGGGTaGGGAGCGCAGCAGCCGCTGTGTGTGGCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CPGWGFPNLTWG*GAQQPLCVAPD Trigger: ATCTGGAGCCACACACAGCGGCTGCTGCGCTCCCCACCCCCAAGTTAAGTTAGGGAAGCCCCAGCCTGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CCCCCAGGAGGAAGGTTGACAGGGCTTGCCGCCACCTaGCTGTCACAGTCAGCTTTCAGCAGCCCCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: PPGGRLTGLAAT*LSQSAFSSPCT Trigger: AGTGCAGGGGCTGCTGAAAGCTGACTGTGACAGCCAGGTGGCGGCAAGCCCTGTCAACCTTCCTCCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCAGGGAAGAGGGCCTaGCCCTTCCAAGCAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PEVAGAASGSHILGRFCTAGKRA*PFQAGQ Trigger: CTGACCTGCTTGGAAGGGCAAGGCCCTCTTCCCTGC...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | GCCAGGGACCTGGAGAGGGTGGCCACTGAGCACCCATaGCCAGGCTCCAAAGGGCACCACCTTAGTGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ARDLERVATEHP*PGSKGHHLSVA Trigger: TGCAACACTAAGGTGGTGCCCTTTGGAGCCTGGTCATGGGTGCTCAGTGGCCACCCTCTCCAGGTCCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | TGGCGCAAGTTCCCTCACGAGGGTGGAGCAAGGCACTaGAATCAAGAGGGAGGGGGCAGGGGTCTAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: WRKFPHEGGARH*NQEGGGRGLGP Trigger: GGGTCCTAGACCCCTGCCCCCTCCCTCTTGATTTCAGTGCCTTGCTCCACCCTCGTGAGGGAACTTGCGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | AGAAACCAGACAGTGGGGAGGTTGGCTTGGCATCAGTaGTGTGGCCAGCCCGTCCCTCCTCCTGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RNQTVGRLAWHQ*CGQPVPPPAQA Trigger: AGCCTGGGCAGGAGGAGGGACGGGCTGGCCACATCACTGATGCCAAGCCAACCTCCCCACTGTCTGGTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | CAGCTGGAGCCCCAAGAGACAGCCACTGCCTGTTGCTaGGGCTCTTGGCCCCATGTGGTGAGGACAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLEPQETATACC*GSWPHVVRTAV Trigger: CACAGCTGTCCTCACCACATGGGGCCAAGAGCCTCAGCAACAGGCAGTGGCTGTCTCTTGGGGCTCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | TTGGCATCAGTGATGTGGCCAGCCCGTCCCTCCTCCTaGCCAGGCTGGGGCTTCCCTAACTTAACTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LASVMWPARPSS*PGWGFPNLTWG Trigger: CCCCCAAGTTAAGTTAGGGAAGCCCCAGCCTGGGCAGGAGGAGGGACGGGCTGGCCACATCACTGATGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | ACTGCGGAGGAGGGAGCCAGCCTCCAGTGGCAGGAGTaGAGGAATGTGTGTGACAGCCATGTTCCCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TAEEGASLQWQE*RNVCDSHVPVQ Trigger: CTGCACGGGAACATGGCTGTCACACACATTCCTCCACTCCTGCCACTGGAGGCTGGCTCCCTCCTCCGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | TGGCTGAGTTTCAGAGACTCGGATCTGGGGCCAGGCTaGGTGGGCTCCTTGCTGTCCTCTGGACCACGAACC | + |
|
Preference number: 3 (lower is better) Translates to: WLSFRDSDLGPG*VGSLLSSGPRT Trigger: GGTTCGTGGTCCAGAGGACAGCAAGGAGCCCACCCAGCCTGGCCCCAGATCCGAGTCTCTGAAACTCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | ATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTaGCACCGTGTGGATGCTCAGCTGGGTCTGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IYQPQVRHSQSS*HRVDAQLGLEL Trigger: GAGCTCCAGACCCAGCTGAGCATCCACACGGTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTaGAACCACCAGCTACTTCTCTTCAGCTGGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLRPAAFLCPWV*NHQLLLFSWSP Trigger: GGGGCTCCAGCTGAAGAGAAGTAGCTGGTGGTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | AGCCATGTTCCCGTGCAGGAGAGCTGTCCTGCATGGTaGCGTCCTGGGTGGGGAGAAGTCAGCAGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHVPVQESCPAW*RPGWGEVSSWR Trigger: TCTCCAGCTGCTGACTTCTCCCCACCCAGGACGTCACCATGCAGGACAGCTCTCCTGCACGGGAACATGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | GTCTCCTCCACTGCGGAGGAGGGAGCCAGCCTCCAGTaGCAGGAGTGGAGGAATGTGTGTGACAGCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSSTAEEGASLQ*QEWRNVCDSHV Trigger: AACATGGCTGTCACACACATTCCTCCACTCCTGCCACTGGAGGCTGGCTCCCTCCTCCGCAGTGGAGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTaGACAGCCTCCTGGGTCCTGGGACATCCAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: GAASGSHILGRF*TASWVLGHPTT Trigger: TGTTGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GGTGAGGCACAGCCAGAGCTCCTGGCACCGTGTGGATaGTCAGCTGGGTCTGGAGCTCTAGAGAATGATCGT | + |
|
Preference number: 3 (lower is better) Translates to: GEAQPELLAPCG*SAGSGALENDR Trigger: ACGATCATTCTCTAGAGCTCCAGACCCAGCTGAGCATCCACACGGTGCCAGGAGCTCTGGCTGTGCCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CACTGTGGGACAGGGCTTCCTGGGAAGATGCTGCACTaGCAGACCAGCATAGGGACGTCTGTCTTCCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HCGTGLPGKMLH*QTSIGTSVFRV Trigger: CACACGGAAGACAGACGTCCCTATGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CCCTGGGTCTGGAACCACCAGCTACTTCTCTTCAGCTaGAGCCCCAAGAGACAGCCACTGCCTGTTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PWVWNHQLLLFS*SPKRQPLPVAE Trigger: CTCAGCAACAGGCAGTGGCTGTCTCTTGGGGCTCCAGCTGAAGAGAAGTAGCTGGTGGTTCCAGACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACACAGCTAAATCCTGCTTaGATGCAGGGAGGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PEVAGAASGSHILGRFCTQLNPA*MQGGWS Trigger: GCTCCAGCCTCCCTGCATCAAAGCAGGATTTAGCTG...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTGCAGGGAAGAGGGCCTaGCCCTTCCAAGCAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLLGALWDRASWEDAAGKRA*PFQAGQ Trigger: CTGACCTGCTTGGAAGGGCAAGGCCCTCTTCCCTGC...AGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | GTGTTGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTaGCACCAGCCTGACCTTTTGCAGAGAGTCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLQCSLAASWAA*HQPDLLQRVTL Trigger: CAGAGTGACTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | AGGAGTGGAGGAATGTGTGTGACAGCCATGTTCCCGTaGAGGAGAGCTGTCCTGCATGGTGACGTCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSGGMCVTAMFP*RRAVLHGDVLG Trigger: ACCCAGGACGTCACCATGCAGGACAGCTCTCCTGCACGGGAACATGGCTGTCACACACATTCCTCCACTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | GGGTCCCACATTCTTGGCAGGTTCTGCACAGCCTCCTaGGTCCTGGGACATCCAACAACACAGCAGAGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: GSHILGRFCTAS*VLGHPTTQQSS Trigger: CGAACTCTGCTGTGTTGTTGGATGTCCCAGGACCCAGGAGGCTGTGCAGAACCTGCCAAGAATGTGGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTaGGAAGATGCTGCACTGGCAGACCAGCATAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLGALWDRAS*EDAALADQHRD Trigger: GTCCCTATGCTGGTCTGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAAGTGGGGAGGTTGGCTaGGCATCAGTGATGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSSGEVG*ASVMWP Trigger: TGGCCACATCACTGATGCCAAGCCAACCTCCCCACT...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | CTGCTGTTGCCAGAGCCAGACACTCTCGCAGGCTCTTaGCTAGAGACCCTGGTGCCAATTAGCACTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLPEPDTLAGS*LETLVPISTSC Trigger: ACAGGAAGTGCTAATTGGCACCAGGGTCTCTAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGGCAACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATTaGTTTCCTTACTTGGCGCACTGTGGGACAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSCPLLLRLLLY*FPYLAHCGTGL Trigger: AAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | GGACGTCTGTCTTCCGTGTGGCTGGAACTATTGATGTaGGACAGCTGTAAGAAGCTGCAGCCTGGCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GRLSSVWLELLM*DSCKKLQPGPP Trigger: AGGTGGGCCAGGCTGCAGCTTCTTACAGCTGTCCCACATCAATAGTTCCAGCCACACGGAAGACAGACGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | ACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTaGGTCTGGAACCACCAGCTACTTCTCTTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLLLRPAAFLCP*VWNHQLLLFSW Trigger: CCAGCTGAAGAGAAGTAGCTGGTGGTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | CATAGGGACGTCTGTCTTCCGTGTGGCTGGAACTATTaGTGTGGGACAGCTGTAAGAAGCTGCAGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HRDVCLPCGWNY*CGTAVRSCSLA Trigger: GGCCAGGCTGCAGCTTCTTACAGCTGTCCCACATCAATAGTTCCAGCCACACGGAAGACAGACGTCCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GGACCCAAGCAAAGGGCTCTAAACCCTGGGGAAGGATaGTTCATCTGTCTGCTGTTGCCAGAGCCAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: GPKQRALNPGEG*FICLLLPEPDT Trigger: AGTGTCTGGCTCTGGCAACAGCAGACAGATGAAGCATCCTTCCCCAGGGTTTAGAGCCCTTTGCTTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | CTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTaGAGAGAGTCACTCTGTGCTCTCCCTGTTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQAGLPDTSLTF*RESLCALPVVS Trigger: ACTTACAACAGGGAGAGCACAGAGTGACTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | GTCACAGTCAGCTTTCAGCAGCCCCTGCACTTCACTTaGTTGGCACTTTACTCCTTAGACCGGCAGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTVSFQQPLHFT*LALYSLDRQPS Trigger: GGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCAAGTGAAGTGCAGGGGCTGCTGAAAGCTGACTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | CCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTaGGACAGGGCTTCCTGGGAAGATGCTGCACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PATVLLSLLGAL*DRASWEDAALA Trigger: TGCCAGTGCAGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CCA 72 bp | TACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTaGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: YSCACYCIAFLT*RTVGQGFLGRC Trigger: GCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | CATGTGGCTTCTAGCAGGTCAGACAATAGGTGGAGATaGAGGAGCACAGAAACCAGACAGTGGGGAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HVASSRSDNRWR*RSTETRQWGGW Trigger: CCAACCTCCCCACTGTCTGGTTTCTGTGCTCCTTCATCTCCACCTATTGTCTGACCTGCTAGAAGCCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTGGCACCACCTTAGTGTaGCAATGCAGCCTGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GDIQIFSVLDACVCVGGGGTTLV*QCSLAA Trigger: TGCAGCCAGGCTGCATTGCAACACTAAGGTGGTGCC...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR TCA 72 bp | AGCAAGAGGGAGAAGGTTAAGTACAGATGTTTTAATTaGGTTCTCAGCAAACAGCCTGAGACGGGGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKREKVKYRCFN*VLSKQPETGAG Trigger: CCCCGCCCCCGTCTCAGGCTGTTTGCTGAGAACTCAATTAAAACATCTGTACTTAACCTTCTCCCTCTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTTGCAGTGGGAAGATTTAATTTGCTTTGTCCTTAAGCAAGAGGGAGAACAGCTAAATCCTGCTTaGATGCAGGGAGGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CVLQWEDLICFVLKQEGEQLNPA*MQGGWS Trigger: GCTCCAGCCTCCCTGCATCAAAGCAGGATTTAGCTG...TTCTCCCTCTTGCTTAAGGACAAAGCAAATTAAATCTTCCCACTGCAACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR GCA 72 bp | TATCACCTTACCCAGGTGATATACAAATATTTAGTGTaGTCGATGCCTGTGTGTGTGTGGGAGGGGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: YHLTQVIYKYLV*SMPVCVWEGVT Trigger: TGTCACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACCTGGGTAAGGTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCACCAGGAAGGCAGGGATaGCGTACTGGATGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAPGRQG*RTGCRC Trigger: GCACCGGCATCCAGTACGTCATCCCTGCCTTCCTGG...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GGGACAGCTGTAAGAAGCTGCAGCCTGGCCCACCTCCATCTGGAGATGCGTAGGCCAGCAGAACGAGGCTaGCGAGCCACCCGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAVRSCSLAHLHLEMRRPAERG*RATRRW Trigger: CCACCGCCGGGTGGCTCGTCAGCCTCGTTCTGCTGG...CCTACGCATCTCCAGATGGAGGTGGGCCAGGCTGCAGCTTCTTACAGCTGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCCCAGCAGAACGAGGCTaGCGAGCCACCCGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCPAERG*RATRRW Trigger: CCACCGCCGGGTGGCTCGTCAGCCTCGTTCTGCTGG...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACACGCAGGTCACCTGCATaGGGGACACGGGCACCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVAGAASGSHILGRFCTRRSPA*GTRAPR Trigger: CCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCG...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | ATGATCGTTCCCACCTTGACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCGAGCTGGGCATTGGCTaGAGCCATGGCTTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: MIVPTLTCPALGTGPGQGELGIG*SHGFHR Trigger: GCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTC...GCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGTCAAGGTGGGAACGATCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCCTGCCCTCGGGACGGGTCCGGGGCAAGGCAGAAAGATGGCAGTGACACCGCGGCCGCGTAGATaGCGAGGTCTCCATACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCPALGTGPGQGRKMAVTPRPRR*RGLHTG Trigger: ACCTGTATGGAGACCTCGCCATCTACGCGGCCGCGG...TGTCACTGCCATCTTTCTGCCTTGCCCCGGACCCGTCCCGAGGGCAGGGCAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAAGTCAGGCCACCCAGAAGGTGTaGCGGAACGGGGACCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: EAVLSRRGGTRPRAGASQATQKV*RNGDLC Trigger: GCATAGGTCCCCGTTCCGCCACACCTTCTGGGTGGC...CTGACTTGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGAGGCCTTGGGCATGGTaGGCGCACCTGTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AAWLQAGLPDTSLTFCRERPWAW*AHLCPR Trigger: TCGTGGGCACAGGTGCGCTCACCATGCCCAAGGCCT...CTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAAGTCAGAGCAGCCGCGTGATGTaGCGCTTGGAGGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAVLSRRGGTRPRAGASQSSRVM*RLEEMG Trigger: TCCCATCTCCTCCAAGCGCCACATCACGCGGCTGCT...CTGACTTGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACGCCACCCAGAAGGTGTaGCGGAACGGGGACCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: AICPIYQPQVRHSQSSWHATQKV*RNGDLC Trigger: GCATAGGTCCCCGTTCCGCCACACCTTCTGGGTGGC...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCAGGAACAGCAGCCGCGTaGTGTGGCGCTTGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLLAVLWTTNPRASMQMPGTAAA*CGAWRR Trigger: TCTCCTCCAAGCGCCACATCACGCGGCTGCTGTTCC...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | AGCACCCATGACCAGGCTCCAAAGGGCACCACCTTAGTGTTGCAATGCAGCCTGTGCAGGTCACCTGCATaGGGGACACGGGCACCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: STHDQAPKGTTLVLQCSLCRSPA*GTRAPR Trigger: CCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCA...CAGGCTGCATTGCAACACTAAGGTGGTGCCCTTTGGAGCCTGGTCATGGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061450.7 |
||
| CDS-3UTR TCA 90 bp | GCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGGGGTGTACATGTCCATaGGGCTGTCCCCACGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAWLQAGLPDTSLTFCREGCTCP*GCPHGS Trigger: GCTTCCGTGGGGACAGCCTCATGGACATGTACACCC...CTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAAGTCAGACTCCAGGTCATGGGTaGAGAAGGCCACCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVLSRRGGTRPRAGASQTPGHG*RRPPEW Trigger: CCATTCTGGTGGCCTTCTGCACCCATGACCTGGAGT...CTGACTTGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATCTCTTCCAGCGGAGCTaGGCATTGGCTGCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYLFQRS*ALAAAM Trigger: CATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAG...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAGGGACCTATGCTTGTTaGCAGTTCCATAGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAGTYAC*QFHSQR Trigger: CCTTTGGCTATGGAACTGTCAACAAGCATAGGTCCC...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATTCAGCTGGGTGTCCTTaGGGCAGAGGTACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYSAGCP*GRGTPG Trigger: TCCTGGTGTACCTCTGCCGCAAGGACACCCAGCTGA...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCCAGGGACTCCAGGTCATaGGTGCAGAAGGCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGAASGSHILGRFCTARDSRS*VQKATR Trigger: TCTGGTGGCCTTCTGCACCCATGACCTGGAGTCCCT...GGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 72 bp | GCCCCAAGAGACAGCCACTGCCTGTTGCTGAGGCTCTaGGCCCCATGTGGTGAGGACAGCTGTGTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: APRDSHCLLLRL*APCGEDSCVAL Trigger: CAAAGCCACACAGCTGTCCTCACCACATGGGGCCAAGAGCCTCAGCAACAGGCAGTGGCTGTCTCTTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACATCAGCTGGGTGTCCTTaGGGCAGAGGTACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEVAGAASGSHILGRFCTSAGCP*GRGTPG Trigger: TCCTGGTGTACCTCTGCCGCAAGGACACCCAGCTGA...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACAGCCTCTGCACAGACAGGATaGGGCGTTTCTCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGAASGSHILGRFCTASAQTG*GVSLPS Trigger: AGAGGGCAGAGAAACGCCCCATCCTGTCTGTGCAGA...GGCTGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGTCTGCACAGACAGGATaGGGCGTTTCTCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAWLQAGLPDTSLTFCRESAQTG*GVSLPS Trigger: AGAGGGCAGAGAAACGCCCCATCCTGTCTGTGCAGA...CTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACAGCAGCCGCGTGATGTaGCGCTTGGAGGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNSSRVM*RLEEMG Trigger: TCCCATCTCCTCCAAGCGCCACATCACGCGGCTGCT...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGGGCAGGGATGATGGGCAGCTGTCCCTTACTCCTGCGCCTGCTACTGTATGTGCCACCTTCACGGTaGAAGAGCGTCTTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGAGMMGSCPLLLRLLLYVPPSR*KSVFQL Trigger: CAACTGGAAGACGCTCTTCCACCGTGAAGGTGGCAC...ATACAGTAGCAGGCGCAGGAGTAAGGGACAGCTGCCCATCATCCCTGCCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACAGGCCTTGGGCATGGTaGGCGCACCTGTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHRPWAW*AHLCPR Trigger: TCGTGGGCACAGGTGCGCTCACCATGCCCAAGGCCT...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAGGAACAGCAGCCGCGTaGTGTGGCGCTTGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSGTAAA*CGAWRR Trigger: TCTCCTCCAAGCGCCACATCACGCGGCTGCTGTTCC...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCAGATGGGGCGTTTCTCTaGCCTCTCGTAGTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLAVLWTTNPRASMQMPDGAFL*PLVVVL Trigger: CAAGACAACTACGAGAGGGCAGAGAAACGCCCCATC...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCCAGACACTCTCGCAGGCTCTTGCCTAGAGACCCTGGTGCCAATTAGCCTTGTCCTTTCCCGATaGGCACCAGGGCCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PEPDTLAGSCLETLVPISLVLSR*APGPAQ Trigger: TTGTGCTGGCCCTGGTGCGCATCGGGAAAGGACAAG...GCTAATTGGCACCAGGGTCTCTAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGTTGGCTAGGGGCGGGTaGCCCTCTCCTTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGLARGG*PSPCPF Trigger: GAAAGGACAAGGAGAGGGGCACCCGCCCCTAGCCAA...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCCATTGGCTGCAGCCATaGCTTCCATCGCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCHWLQP*LPSQRW Trigger: CCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATG...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGTGGCAGGTGCTGCCAGTGGGTCCCACATTCTTGGCAGGTTCTGCACACATTGGCTGCAGCCATaGCTTCCATCGCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVAGAASGSHILGRFCTHWLQP*LPSQRW Trigger: CCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATG...TGTGCAGAACCTGCCAAGAATGTGGGACCCACTGGCAGCACCTGCCACCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGTCCCCACAAGAGGGAGGGTTATAGATGCTTGCTGCTTAGAGGCCACGCTCTTCCAGCGGAGCTaGGCATTGGCTGCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LEVPTRGRVIDACCLEATLFQRS*ALAAAM Trigger: CATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAG...CGTGGCCTCTAAGCAGCAAGCATCTATAACCCTCCCTCTTGTGGGGACCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGCACTGTCTGAGGCTGTaGACGAGTCTTCGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAWLQAGLPDTSLTFCREHCLRL*TSLRHP Trigger: AGGATGACGAAGACTCGTCCACAGCCTCAGACAGTG...CTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGACGTAGTTGTCTTGGCTaGGGAGGTCACTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLALYSLDRQPSSAPGSGRSCLG*GGHCLR Trigger: CCTCAGACAGTGACCTCCTCAGCCAAGACAACTACG...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GCCATCTGCCCCATCTACCAGCCTCAGGTGAGGCACAGCCAGAGCTCCTGGCACTTTCCACCCGGTCTGTaGTTTCAAAAAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AICPIYQPQVRHSQSSWHFPPGL*FQKGWQ Trigger: CTGCCAACCTTTTTGAAATCACAGACCGGGTGGAAA...GTGCCAGGAGCTCTGGCTGTGCCTCACCTGAGGCTGGTAGATGGGGCAGATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAGGGTGTACATGTCCATaGGGCTGTCCCCACGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSGCTCP*GCPHGS Trigger: GCTTCCGTGGGGACAGCCTCATGGACATGTACACCC...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATGCTCCAGGAAGGCAGGGATaGCGTACTGGATGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLSLLGALWDRASWEDAPGRQG*RTGCRC Trigger: GCACCGGCATCCAGTACGTCATCCCTGCCTTCCTGG...AGCATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCCAGACACTCTCGCAGGCTCTTGCCTAGAGACCCTGGTGCCAATTAGCACTCCAGGTCATGGGTaGAGAAGGCCACCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PEPDTLAGSCLETLVPISTPGHG*RRPPEW Trigger: CCATTCTGGTGGCCTTCTGCACCCATGACCTGGAGT...GCTAATTGGCACCAGGGTCTCTAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACCCGCGGCCGCGTAGATaGCGAGGTCTCCATACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHPRPRR*RGLHTG Trigger: ACCTGTATGGAGACCTCGCCATCTACGCGGCCGCGG...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCAGAGGAGGTCACTGTCTaGGGCTGTGGACGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSEEVTV*GCGRVF Trigger: GAAGACTCGTCCACAGCCTCAGACAGTGACCTCCTC...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGGGACATCAAAGAAGGTaGACGGGCCAAGAAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGGHQRR*TGQEGR Trigger: CCGTCCTTCTTGGCCCGTTCACCTTCTTTGATGTCC...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGGGGCCAGCACAATCATaGTGGCAAAGGCGATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGGPAQS*WQRRSI Trigger: GATGGATCGCCTTTGCCATCATGATTGTGCTGGCCC...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGCAATGCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCGGGACCTATGCTTGTTaGCAGTTCCATAGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CNAAWLQAGLPDTSLTFCGTYAC*QFHSQR Trigger: CCTTTGGCTATGGAACTGTCAACAAGCATAGGTCCC...GCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGCATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAGATGGGGCGTTTCTCTaGCCTCTCGTAGTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLALYSLDRQPSSAPGSGDGAFL*PLVVVL Trigger: CAAGACAACTACGAGAGGGCAGAGAAACGCCCCATC...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGGAAGGCCAGGATCAGTaGGTAGTCCAGGAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGEGQDQ*VVQEQQ Trigger: CTGCTGTTCCTGGACTACGCACTGATCCTGGCCTTC...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGAAGGGACTCCAGGTCATaGGTGCAGAAGGCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYSCACYCIAFLTWRTVGRDSRS*VQKATR Trigger: TCTGGTGGCCTTCTGCACCCATGACCTGGAGTCCCT...TCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 72 bp | CTAAACCCTGGGGAAGGATGCTTCATCTGTCTGCTGTaGCCAGAGCCAGACACTCTCGCAGGCTCTTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LNPGEGCFICLL*PEPDTLAGSCL Trigger: TAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGGCAACAGCAGACAGATGAAGCATCCTTCCCCAGGGTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGAACTTTCCACCCGGTCTGTaGTTTCAAAAAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTLLLRPAAFLCPWVWNFPPGL*FQKGWQ Trigger: CTGCCAACCTTTTTGAAATCACAGACCGGGTGGAAA...GTTCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | CCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGAGAAGGCCAGGATCAGTaGGTAGTCCAGGAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSCACYCIAFLTWRTVGEGQDQ*VVQEQQ Trigger: CTGCTGTTCCTGGACTACGCACTGATCCTGGCCTTC...TCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGTCCCCACAAGAGGGAGGGTTATAGATGCTTGCTGCTTAGAGGCCACGTCATCCTCTTCCTTGTaGGTCTCCATCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEVPTRGRVIDACCLEATSSSSL*VSILFQ Trigger: CTGGAAGAGGATGGAGACCCACAAGGAAGAGGATGA...CGTGGCCTCTAAGCAGCAAGCATCTATAACCCTCCCTCTTGTGGGGACCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGAGTGCCACCTTCACGGTaGAAGAGCGTCTTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PYSCACYCIAFLTWRTVGVPPSR*KSVFQL Trigger: CAACTGGAAGACGCTCTTCCACCGTGAAGGTGGCAC...TCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 72 bp | TTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTaGGCGCACTGTGGGACAGGGCTTCCTGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRLLLYCFPY*AHCGTGLPGKM Trigger: CATCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 72 bp | ACAGTCAGCTTTCAGCAGCCCCTGCACTTCACTTGCTaGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSFQQPLHFTC*ALYSLDRQPSS Trigger: AGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCAAGTGAAGTGCAGGGGCTGCTGAAAGCTGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| 3UTR CAA 72 bp | TGTCACAGTCAGCTTTCAGCAGCCCCTGCACTTCACTaGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHSQLSAAPALH*LGTLLLRPAAF Trigger: GAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCAAGTGAAGTGCAGGGGCTGCTGAAAGCTGACTGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGGCACATCGAAAATGCAGTTCATCACTCACTCATCATTCCAAGGCATCGAGCTGGGCATTGGCTaGAGCCATGGCTTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: AEGTSKMQFITHSSFQGIELGIG*SHGFHR Trigger: GCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTC...GATGCCTTGGAATGATGAGTGAGTGATGAACTGCATTTTCGATGTGCCTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGACACTGTCTGAGGCTGTaGACGAGTCTTCGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRHCLRL*TSLRHP Trigger: AGGATGACGAAGACTCGTCCACAGCCTCAGACAGTG...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGATCACTGGTGCTCAAAGCAGAAGGCACATCGAAAATGCAGTTCATCACTCGTAGTTGTCTTGGCTaGGGAGGTCACTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSLVLKAEGTSKMQFITRSCLG*GGHCLR Trigger: CCTCAGACAGTGACCTCCTCAGCCAAGACAACTACG...AGTGATGAACTGCATTTTCGATGTGCCTTCTGCTTTGAGCACCAGTGATCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTGGGCCAGCACAATCATaGTGGCAAAGGCGATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GDIQIFSVLDACVCVGGGGPAQS*WQRRSI Trigger: GATGGATCGCCTTTGCCATCATGATTGTGCTGGCCC...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | AGCACCCATGACCAGGCTCCAAAGGGCACCACCTTAGTGTTGCAATGCAGCCTGAGGTACTTAGTCTTCTaGACATCAAAGAAGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STHDQAPKGTTLVLQCSLRYLVF*TSKKVN Trigger: GTTCACCTTCTTTGATGTCCAGAAGACTAAGTACCT...CAGGCTGCATTGCAACACTAAGGTGGTGCCCTTTGGAGCCTGGTCATGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGAGGTACTTAGTCTTCTaGACATCAAAGAAGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGRYLVF*TSKKVN Trigger: GTTCACCTTCTTTGATGTCCAGAAGACTAAGTACCT...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTTGCAGTGGGAAGATTTAATTTGCTTTGTCCTTAAGCAAGAGGGAGAATTGGCTAGGGGCGGGTaGCCCTCTCCTTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLQWEDLICFVLKQEGELARGG*PSPCPF Trigger: GAAAGGACAAGGAGAGGGGCACCCGCCCCTAGCCAA...TTCTCCCTCTTGCTTAAGGACAAAGCAAATTAAATCTTCCCACTGCAACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTTGCAGTGGGAAGATTTAATTTGCTTTGTCCTTAAGCAAGAGGGAGAAGGACATCAAAGAAGGTaGACGGGCCAAGAAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CVLQWEDLICFVLKQEGEGHQRR*TGQEGR Trigger: CCGTCCTTCTTGGCCCGTTCACCTTCTTTGATGTCC...TTCTCCCTCTTGCTTAAGGACAAAGCAAATTAAATCTTCCCACTGCAACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAGTCAGCTGGGTGTCCTaGCGGCAGAGGTACACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPEAVLSRRGGTRPRAGAVSWVS*RQRYTR Trigger: CCTGGTGTACCTCTGCCGCAAGGACACCCAGCTGAC...TGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTCTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS TCA 90 bp | CCACGCCGCAAGAGTCATTTCCAGAGACGCTGCAGGTCACCTGCATaGGGGACACGGGCACCGCGGCCGCGTAGATGGCGAGGTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRKSHFQRRCRSPA*GTRAPRPRRWRGLH Trigger: ATGGAGACCTCGCCATCTACGCGGCCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCAGCGTCTCTGGAAATGACTCTTGCGGCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061450.7 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCAGCGGTGGCAAAGGCCTaGGGCATGGTGAGCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GLLAVLWTTNPRASMQMPAVAKA*GMVSAP Trigger: AGGTGCGCTCACCATGCCCAAGGCCTTTGCCACCGC...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTTGCTGTCCTCTGGACCACGAACCCCAGGGCCTCTATGCAGATGCCACAGCGGAGCTGGGCATaGGCTGCAGCCATGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLAVLWTTNPRASMQMPQRSWA*AAAMAS Trigger: GGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTG...TGGCATCTGCATAGAGGCCCTGGGGTTCGTGGTCCAGAGGACAGCAAGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGTTCTGTCCAGGAGAGGCGGGACTAGGCCCAGGGCTGGGGCAAGTCAGAAGAGCGTCTTCCAGTaGTTGCGCAGGGTCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EAVLSRRGGTRPRAGASQKSVFQ*LRRVTA Trigger: CGCGGTGACCCTGCGCAACAACTGGAAGACGCTCTT...CTGACTTGCCCCAGCCCTGGGCCTAGTCCCGCCTCTCCTGGACAGAACTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | GGGACAGCTGTAAGAAGCTGCAGCCTGGCCCACCTCCATCTGGAGATGCGTAGGCGGGTGCCCCTCTCCTaGTCCTTTCCCGATGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTAVRSCSLAHLHLEMRRRVPLS*SFPDAH Trigger: GTGCGCATCGGGAAAGGACAAGGAGAGGGGCACCCG...CCTACGCATCTCCAGATGGAGGTGGGCCAGGCTGCAGCTTCTTACAGCTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS TCA 90 bp | CCAGGTCATGGGTGCAGAAGGCCACCAGAATGGGAGGCACCAGGGTaGTCGTGGGGAACACCACTCGGTCTACCACCCATGGGTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGHGCRRPPEWEAPG*SWGTPLGLPPMGRC Trigger: GCACCTACCCATGGGTGGTAGACCGAGTGGTGTTCCCCACGATCACCCTGGTGCCTCCCATTCTGGTGGCCTTCTGCACCCATGACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS TCA 90 bp | TATCCACGCCGCAAGAGTCATTTCCAGAGACGCAGGTCACCTGCATaGGGGACACGGGCACCGCGGCCGCGTAGATGGCGAGGTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YPRRKSHFQRRRSPA*GTRAPRPRRWRGLH Trigger: ATGGAGACCTCGCCATCTACGCGGCCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCGTCTCTGGAAATGACTCTTGCGGCGTGGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100235.9 |
||
| CDS CCA 90 bp | CCACCCGGCGCAGGGGGCCCCAGCACAGATCAGTGTCGTTGTATCTaGCGTCTGTATCCACGCCGCAAGAGTCATTTCCAGAGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGAGGPSTDQCRCI*RLYPRRKSHFQRRC Trigger: GCAGCGTCTCTGGAAATGACTCTTGCGGCGTGGATACAGACGCCAGATACAACGACACTGATCTGTGCTGGGGCCCCCTGCGCCGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061450.7 |
||
| CDS CCA 90 bp | CCACCCGGCGCAGGGGGCCCCAGCACAGATCAGTGTCGTTGTATCTaGCGTCTGTATCCACGCCGCAAGAGTCATTTCCAGAGACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGAGGPSTDQCRCI*RLYPRRKSHFQRRR Trigger: CCTGCGTCTCTGGAAATGACTCTTGCGGCGTGGATACAGACGCCAGATACAACGACACTGATCTGTGCTGGGGCCCCCTGCGCCGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTGGCTGCAAGCTGGGCTGCCTGACACCAGCCTGACCTTTTGCAGAGAGAGCGTCTTCCAGTTGTaGCGCAGGGTCACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAWLQAGLPDTSLTFCRESVFQL*RRVTAM Trigger: CATCGCGGTGACCCTGCGCAACAACTGGAAGACGCT...CTCTCTGCAAAAGGTCAGGCTGGTGTCAGGCAGCCCAGCTTGCAGCCAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | AGCACCCATGACCAGGCTCCAAAGGGCACCACCTTAGTGTTGCAATGCAGCCTGCGGGTGCCCCTCTCCTaGTCCTTTCCCGATGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STHDQAPKGTTLVLQCSLRVPLS*SFPDAH Trigger: GTGCGCATCGGGAAAGGACAAGGAGAGGGGCACCCG...CAGGCTGCATTGCAACACTAAGGTGGTGCCCTTTGGAGCCTGGTCATGGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS GCA 90 bp | GAAGATAGCCGTGAAGGAGAGGAGGCCGTAGAAGGCCAGGATCAGTaGGTAGTCCAGGAACAGCAGCCGCGTGATGTGGCGCTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EDSREGEEAVEGQDQ*VVQEQQPRDVALGG Trigger: TCCTCCAAGCGCCACATCACGCGGCTGCTGTTCCTGGACTACGCACTGATCCTGGCCTTCTACGGCCTCCTCTCCTTCACGGCTATCTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | CCTTACTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGATGGACCCCCAAGAAGTaGGCTAGGGGCGGGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PYSCACYCIAFLTWRTVGWTPKK*ARGGCP Trigger: GGGGCACCCGCCCCTAGCCAACTTCTTGGGGGTCCA...TCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAGTAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACTGGACCCCCAAGAAGTaGGCTAGGGGCGGGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHWTPKK*ARGGCP Trigger: GGGGCACCCGCCCCTAGCCAACTTCTTGGGGGTCCA...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 90 bp | GGTGCTGATGGTGAACACAGGGAAGAGGCCCAGAAAGAACCGGACTaGAGCAAGGCCCACGACGTCACACCTCGCGAAGTTGAGGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: GADGEHREEAQKEPD*SKAHDVTPREVEGV Trigger: TACACCCTCAACTTCGCGAGGTGTGACGTCGTGGGCCTTGCTGCAGTCCGGTTCTTTCTGGGCCTCTTCCCTGTGTTCACCATCAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 90 bp | AGGCACCAGGGTGATCGTGGGGAACACCACTCGGTCTACCACCCATaGGTAGGTGCCACCTTCACGGTGGAAGAGCGTCTTCCAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RHQGDRGEHHSVYHP*VGATFTVEERLPVV Trigger: AACAACTGGAAGACGCTCTTCCACCGTGAAGGTGGCACCTACCCATGGGTGGTAGACCGAGTGGTGTTCCCCACGATCACCCTGGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACGCGGTGGCAAAGGCCTaGGGCATGGTGAGCGCACCT | + |
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Preference number: 5 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHAVAKA*GMVSAP Trigger: AGGTGCGCTCACCATGCCCAAGGCCTTTGCCACCGC...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 90 bp | CAAAGGCCACCCAGAAGGTGTGGCGGAACGGGGACCTATGCTTGTTaGCAGTTCCATAGCCAAAGGTCAGCTGGGTGTCCTTGCGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: QRPPRRCGGTGTYAC*QFHSQRSAGCPCGR Trigger: TCTGCCGCAAGGACACCCAGCTGACCTTTGGCTATGGAACTGTCAACAAGCATAGGTCCCCGTTCCGCCACACCTTCTGGGTGGCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 90 bp | CCTCTTCCTTGTGGGTCTCCATCCTCTTCCAGCGGAGCTGGGCATTaGCTGCAGCCATGGCTTCCATCGCAAAGGTGGTTGTCACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPCGSPSSSSGAGH*LQPWLPSQRWLSQS Trigger: GCTTTGTGACAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACCCACAAGGAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 90 bp | TCGTCATCCTCTTCCTTGTGGGTCTCCATCCTCTTCCAGCGGAGCTaGGCATTGGCTGCAGCCATGGCTTCCATCGCAAAGGTGGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SSSSSLWVSILFQRS*ALAAAMASIAKVVV Trigger: GACAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACCCACAAGGAAGAGGATGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGCCAGACACTCTCGCAGGCTCTTGCCTAGAGACCCTGGTGCCAATTAGCGCGATGATGGGGAAGTaGGTGCTGATGGTGAACACA | + |
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Preference number: 5 (lower is better) Translates to: PEPDTLAGSCLETLVPISAMMGK*VLMVNT Trigger: TGTGTTCACCATCAGCACCAACTTCCCCATCATCGC...GCTAATTGGCACCAGGGTCTCTAGGCAAGAGCCTGCGAGAGTGTCTGGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGGGAGGGGGTGACAACAAATGATACCCACAAATGCTACCCCCACAGCGTCTTCCAGTTGTaGCGCAGGGTCACCGCGATG | + |
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Preference number: 5 (lower is better) Translates to: VCVWEGVTTNDTHKCYPHSVFQL*RRVTAM Trigger: CATCGCGGTGACCCTGCGCAACAACTGGAAGACGCT...GTGGGGGTAGCATTTGTGGGTATCATTTGTTGTCACCCCCTCCCACACACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | TACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGCTTCCTGGGAAGAGTCAGCTGGGTGTCCTaGCGGCAGAGGTACACCAGG | + |
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Preference number: 5 (lower is better) Translates to: YCIAFLTWRTVGQGFLGRVSWVS*RQRYTR Trigger: CCTGGTGTACCTCTGCCGCAAGGACACCCAGCTGAC...TCTTCCCAGGAAGCCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 90 bp | TTCCTTGTGGGTCTCCATCCTCTTCCAGCGGAGCTGGGCATTGGCTaGAGCCATGGCTTCCATCGCAAAGGTGGTTGTCACAAAGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: FLVGLHPLPAELGIG*SHGFHRKGGCHKAH Trigger: ATGAGCTTTGTGACAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACCCACAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GGTGATATACAAATATTTAGTGTGCTCGATGCCTGTGTGTGTGTGGGAGGGGGTCAGCGGAGCTGGGCATaGGCTGCAGCCATGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDIQIFSVLDACVCVGGGQRSWA*AAAMAS Trigger: GGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTG...ACCCCCTCCCACACACACACAGGCATCGAGCACACTAAATATTTGTATATCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | CTCCTGCGCCTGCTACTGTATTGCTTTCCTTACTTGGCGCACTGTGGGACAGGGTCACACCTCGCGAAGTaGAGGGTGTACATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLRLLLYCFPYLAHCGTGSHLAK*RVYMSM Trigger: CATGGACATGTACACCCTCAACTTCGCGAGGTGTGA...CCCTGTCCCACAGTGCGCCAAGTAAGGAAAGCAATACAGTAGCAGGCGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 90 bp | TTTCTCTGCCCTCTCGTAGTTGTCTTGGCTGAGGAGGTCACTGTCTaGGGCTGTGGACGAGTCTTCGTCATCCTCTTCCTTGTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLCPLVVVLAEEVTV*GCGRVFVILFLVGL Trigger: GAGACCCACAAGGAAGAGGATGACGAAGACTCGTCCACAGCCTCAGACAGTGACCTCCTCAGCCAAGACAACTACGAGAGGGCAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GGGACAGCTGTAAGAAGCTGCAGCCTGGCCCACCTCCATCTGGAGATGCGTAGGTTGACCCCCACTTTATaGAAGAACATGGAAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GTAVRSCSLAHLHLEMRRLTPTL*KNMEAI Trigger: GATGGCTTCCATGTTCTTCAATAAAGTGGGGGTCAA...CCTACGCATCTCCAGATGGAGGTGGGCCAGGCTGCAGCTTCTTACAGCTGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | TGTGCCCAACACTCCTGGCTACCAGTGACAGAGGCCTGGTGTGATAAGACCTCATCACACCTCGCGAAGTaGAGGGTGTACATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CAQHSWLPVTEAWCDKTSSHLAK*RVYMSM Trigger: CATGGACATGTACACCCTCAACTTCGCGAGGTGTGA...TGAGGTCTTATCACACCAGGCCTCTGTCACTGGTAGCCAGGAGTGTTGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | TGCTTGGCACTTTACTCCTTAGACCGGCAGCCTTCCTCTGCCCCTGGGTCTGGATTGACCCCCACTTTATaGAAGAACATGGAAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLALYSLDRQPSSAPGSGLTPTL*KNMEAI Trigger: GATGGCTTCCATGTTCTTCAATAAAGTGGGGGTCAA...TCCAGACCCAGGGGCAGAGGAAGGCTGCCGGTCTAAGGAGTAAAGTGCCAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GAGGGATCACTGGTGCTCAAAGCAGAAGGCACATCGAAAATGCAGTTCATCACTAAGAGCGTCTTCCAGTaGTTGCGCAGGGTCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EGSLVLKAEGTSKMQFITKSVFQ*LRRVTA Trigger: CGCGGTGACCCTGCGCAACAACTGGAAGACGCTCTT...AGTGATGAACTGCATTTTCGATGTGCCTTCTGCTTTGAGCACCAGTGATCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GCAGAAGGCACATCGAAAATGCAGTTCATCACTCACTCATCATTCCAAGGCATCGCGATGATGGGGAAGTaGGTGCTGATGGTGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: AEGTSKMQFITHSSFQGIAMMGK*VLMVNT Trigger: TGTGTTCACCATCAGCACCAACTTCCCCATCATCGC...GATGCCTTGGAATGATGAGTGAGTGATGAACTGCATTTTCGATGTGCCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 90 bp | ATCATGATGGCAAAGGCGATCCATCTCATCATAGAGGTCAAGATCTaGAGGTACTTAGTCTTCTGGACATCAAAGAAGGTGAACGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IMMAKAIHLIIEVKI*RYLVFWTSKKVNGP Trigger: TGGCCCGTTCACCTTCTTTGATGTCCAGAAGACTAAGTACCTGCAGATCTTGACCTCTATGATGAGATGGATCGCCTTTGCCATCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 90 bp | ATCCATCTCATCATAGAGGTCAAGATCTGCAGGTACTTAGTCTTCTaGACATCAAAGAAGGTGAACGGGCCAAGAAGGACGGTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IHLIIEVKICRYLVF*TSKKVNGPRRTVKM Trigger: CATCTTCACCGTCCTTCTTGGCCCGTTCACCTTCTTTGATGTCCAGAAGACTAAGTACCTGCAGATCTTGACCTCTATGATGAGATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS-3UTR CAA 90 bp | GCAGAAGGCACATCGAAAATGCAGTTCATCACTCACTCATCATTCCAAGGCATCGTGATTTCAAAAAGGTaGGCAGATGAGCGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEGTSKMQFITHSSFQGIVISKR*ADERLC Trigger: GCAGAGACGCTCATCTGCCAACCTTTTTGAAATCAC...GATGCCTTGGAATGATGAGTGAGTGATGAACTGCATTTTCGATGTGCCTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | CGCAAGAGTCATTTCCAGAGACGCAGGTCACCTGCATaGGGGACACGGGCACCGCGGCCGCGTAGATGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RKSHFQRRRSPA*GTRAPRPRRWR Trigger: TCGCCATCTACGCGGCCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCGTCTCTGGAAATGACTCTTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100235.9 |
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| CDS GCA 72 bp | AGGTTCTGGACCCCCAAGAAGTTGGCTAGGGGCGGGTaGCCCTCTCCTTGTCCTTTCCCGATGCGCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFWTPKKLARGG*PSPCPFPMRTR Trigger: CCTGGTGCGCATCGGGAAAGGACAAGGAGAGGGGCACCCGCCCCTAGCCAACTTCTTGGGGGTCCAGAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | AAGAGTCATTTCCAGAGACGCTGCAGGTCACCTGCATaGGGGACACGGGCACCGCGGCCGCGTAGATGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: KSHFQRRCRSPA*GTRAPRPRRWR Trigger: TCGCCATCTACGCGGCCGCGGTGCCCGTGTCCCTCATGCAGGTGACCTGCAGCGTCTCTGGAAATGACTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061450.7 |
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| CDS TCA 72 bp | GGGTGCAGAAGGCCACCAGAATGGGAGGCACCAGGGTaGTCGTGGGGAACACCACTCGGTCTACCACCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GCRRPPEWEAPG*SWGTPLGLPPM Trigger: CATGGGTGGTAGACCGAGTGGTGTTCCCCACGATCACCCTGGTGCCTCCCATTCTGGTGGCCTTCTGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | TGTCCTTGCGGCAGAGGTACACCAGGAAGGCAGGGATaGCGTACTGGATGCCGGTGCCCGCATAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CPCGRGTPGRQG*RTGCRCPHRLL Trigger: CAGGAGCCTATGCGGGCACCGGCATCCAGTACGTCATCCCTGCCTTCCTGGTGTACCTCTGCCGCAAGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 72 bp | CGTGAAGGAGAGGAGGCCGTAGAAGGCCAGGATCAGTaGGTAGTCCAGGAACAGCAGCCGCGTGATGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: REGEEAVEGQDQ*VVQEQQPRDVA Trigger: CGCCACATCACGCGGCTGCTGTTCCTGGACTACGCACTGATCCTGGCCTTCTACGGCCTCCTCTCCTTCACG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 72 bp | GGTCTCCATCCTCTTCCAGCGGAGCTGGGCATTGGCTaGAGCCATGGCTTCCATCGCAAAGGTGGTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLHPLPAELGIG*SHGFHRKGGCH Trigger: GTGACAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 72 bp | GGTGAACACAGGGAAGAGGCCCAGAAAGAACCGGACTaGAGCAAGGCCCACGACGTCACACCTCGCGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GEHREEAQKEPD*SKAHDVTPREV Trigger: AACTTCGCGAGGTGTGACGTCGTGGGCCTTGCTGCAGTCCGGTTCTTTCTGGGCCTCTTCCCTGTGTTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | TGTGGGTCTCCATCCTCTTCCAGCGGAGCTGGGCATTaGCTGCAGCCATGGCTTCCATCGCAAAGGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CGSPSSSSGAGH*LQPWLPSQRWL Trigger: CAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | GGTGATCGTGGGGAACACCACTCGGTCTACCACCCATaGGTAGGTGCCACCTTCACGGTGGAAGAGCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDRGEHHSVYHP*VGATFTVEERL Trigger: AAGACGCTCTTCCACCGTGAAGGTGGCACCTACCCATGGGTGGTAGACCGAGTGGTGTTCCCCACGATCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CAA 72 bp | GTGCCACCTTCACGGTGGAAGAGCGTCTTCCAGTTGTaGCGCAGGGTCACCGCGATGATGGGGAAGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPPSRWKSVFQL*RRVTAMMGKLV Trigger: CACCAACTTCCCCATCATCGCGGTGACCCTGCGCAACAACTGGAAGACGCTCTTCCACCGTGAAGGTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CAA 90 bp | AGCGTCTTCCAGTTGTTGCGCAGGGTCACCGCGATGATGGGGAAGTaGGTGCTGATGGTGAACACAGGGAAGAGGCCCAGAAAGAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVFQLLRRVTAMMGK*VLMVNTGKRPRKNR Trigger: CCGGTTCTTTCTGGGCCTCTTCCCTGTGTTCACCATCAGCACCAACTTCCCCATCATCGCGGTGACCCTGCGCAACAACTGGAAGACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 72 bp | TGGGGAACACCACTCGGTCTACCACCCATGGGTAGGTaGCACCTTCACGGTGGAAGAGCGTCTTCCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WGTPLGLPPMGR*HLHGGRASSSC Trigger: ACAACTGGAAGACGCTCTTCCACCGTGAAGGTGGCACCTACCCATGGGTGGTAGACCGAGTGGTGTTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | TCTTCCTTGTGGGTCTCCATCCTCTTCCAGCGGAGCTaGGCATTGGCTGCAGCCATGGCTTCCATCGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLWVSILFQRS*ALAAAMASIAK Trigger: CTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGATGGAGACCCACAAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | GCAGGGGGCCCCAGCACAGATCAGTGTCGTTGTATCTaGCGTCTGTATCCACGCCGCAAGAGTCATTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGGPSTDQCRCI*RLYPRRKSHFQ Trigger: CTGGAAATGACTCTTGCGGCGTGGATACAGACGCCAGATACAACGACACTGATCTGTGCTGGGGCCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | TGGGGCGTTTCTCTGCCCTCTCGTAGTTGTCTTGGCTaGGGAGGTCACTGTCTGAGGCTGTGGACGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WGVSLPSRSCLG*GGHCLRLWTSL Trigger: AAGACTCGTCCACAGCCTCAGACAGTGACCTCCTCAGCCAAGACAACTACGAGAGGGCAGAGAAACGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | CCCAGAAGGTGTGGCGGAACGGGGACCTATGCTTGTTaGCAGTTCCATAGCCAAAGGTCAGCTGGGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRCGGTGTYAC*QFHSQRSAGCP Trigger: AGGACACCCAGCTGACCTTTGGCTATGGAACTGTCAACAAGCATAGGTCCCCGTTCCGCCACACCTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | TCCTCTTCCAGCGGAGCTGGGCATTGGCTGCAGCCATaGCTTCCATCGCAAAGGTGGTTGTCACAAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSGAGHWLQP*LPSQRWLSQSS Trigger: TGAGCTTTGTGACAACCACCTTTGCGATGGAAGCCATGGCTGCAGCCAATGCCCAGCTCCGCTGGAAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | AAAGGTTGGCAGATGAGCGTCTCTGCACAGACAGGATaGGGCGTTTCTCTGCCCTCTCGTAGTTGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KGWQMSVSAQTG*GVSLPSRSCLG Trigger: GCCAAGACAACTACGAGAGGGCAGAGAAACGCCCCATCCTGTCTGTGCAGAGACGCTCATCTGCCAACCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS TCA 72 bp | CCTCTCGTAGTTGTCTTGGCTGAGGAGGTCACTGTCTaGGGCTGTGGACGAGTCTTCGTCATCCTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLVVVLAEEVTV*GCGRVFVILFL Trigger: AAGGAAGAGGATGACGAAGACTCGTCCACAGCCTCAGACAGTGACCTCCTCAGCCAAGACAACTACGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS CCA 72 bp | ATCATAGAGGTCAAGATCTGCAGGTACTTAGTCTTCTaGACATCAAAGAAGGTGAACGGGCCAAGAAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: IIEVKICRYLVF*TSKKVNGPRRT Trigger: CGTCCTTCTTGGCCCGTTCACCTTCTTTGATGTCCAGAAGACTAAGTACCTGCAGATCTTGACCTCTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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| CDS GCA 72 bp | GCAAAGGCGATCCATCTCATCATAGAGGTCAAGATCTaGAGGTACTTAGTCTTCTGGACATCAAAGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AKAIHLIIEVKI*RYLVFWTSKKV Trigger: CACCTTCTTTGATGTCCAGAAGACTAAGTACCTGCAGATCTTGACCTCTATGATGAGATGGATCGCCTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061450.7 ENSMUST00000100235.9 |
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