RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM101 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020921

Ensembl transcript IDs: ENSMUST00000021296.7

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCAGGCCCTGCCTGTTCTCAACTCTAGAGCGAGAGTCAGAGAACTaGGATTATTCCTGCCCCAGCAGACAGACCCCCAAAGAGCCCATG +
Preference number: 1 (lower is better)
Translates to: TRPCLFSTLERESEN*DYSCPSRQTPKEPM
Trigger: CATGGGCTCTTTGGGGGTCTGTCTGCTGGGGCAGGAATAATCCCAGTTCTCTGACTCTCGCTCTAGAGTTGAGAACAGGCAGGGCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR GCA 90 bp AAATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTGGGTGGGTaGTCCACTCAGCCAGCCAACCAAGAAGCTGAGAACAGATGCAGC +
Preference number: 1 (lower is better)
Translates to: KCLFSEDSVVWCLGG*STQPANQEAENRCS
Trigger: GCTGCATCTGTTCTCAGCTTCTTGGTTGGCTGGCTGAGTGGAGCACCCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR-3UTR GCA 90 bp CACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGAGCGGGCGGTGGCCTCCTGTaGCCAAACCAGGCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: HLAHPRAHQALPVLNSRAGGGLL*PNQALP
Trigger: GGGGAGAGCCTGGTTTGGGCACAGGAGGCCACCGCC...CGCTCTAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR-3UTR CCA 90 bp CTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGAGGTGGCCTTCGGCGGTaGCCTCCTGTGCCCAAACCA +
Preference number: 2 (lower is better)
Translates to: LHLAHPRAHQALPVLNSRGGLRR*PPVPKP
Trigger: TGGTTTGGGCACAGGAGGCCACCGCCGAAGGCCACC...TCTAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR-3UTR GCA 90 bp TGCTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTATCCCCAACTTCTACCTaGACCCCAGCTCTGCCTTAC +
Preference number: 2 (lower is better)
Translates to: CSTLHIPEHTRPCLFSTLSPTST*TPALPY
Trigger: GTAAGGCAGAGCTGGGGTGCAGGTAGAAGTTGGGGA...TAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR-3UTR TCA 90 bp CCTGCCCCAGCAGACAGACCCCCAAAGAGCCCATGTGACGTCTGTAGCACCAGCCTACTTCTATACATGTaGAGACACACATGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: PAPADRPPKSPCDVCSTSLLLYM*RHTCVN
Trigger: GTTCACACATGTGTGTCTTCACATGTATAGAAGTAG...GCTGGTGCTACAGACGTCACATGGGCTCTTTGGGGGTCTGTCTGCTGGGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR-3UTR TCA 90 bp TGCTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAACACACACACTAGTCTaGAAAGCACTGTTTAGTTTA +
Preference number: 2 (lower is better)
Translates to: CSTLHIPEHTRPCLFSTLTHTLV*KALFSL
Trigger: TAAACTAAACAGTGCTTTTCAGACTAGTGTGTGTGT...TAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR GCA 72 bp TGCAGCAGCAGGCTGACTGACAGGCCTGCTCCACCTTaGACATCCCAGAGCACACCAGGCCCTGCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: CSSRLTDRPAPP*TSQSTPGPACS
Trigger: AGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCAGGCCTGTCAGTCAGCCTGCTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR GCA 72 bp TCCACTCAGCCAGCCAACCAAGAAGCTGAGAACAGATaGAGCAGCAGGCTGACTGACAGGCCTGCTCCACCT +
Preference number: 3 (lower is better)
Translates to: STQPANQEAENR*SSRLTDRPAPP
Trigger: AGGTGGAGCAGGCCTGTCAGTCAGCCTGCTGCTGCATCTGTTCTCAGCTTCTTGGTTGGCTGGCTGAGTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR CCA 72 bp TGCCTGTTCTCAACTCTAGAGCGAGAGTCAGAGAACTaGGATTATTCCTGCCCCAGCAGACAGACCCCCAAA +
Preference number: 3 (lower is better)
Translates to: CLFSTLERESEN*DYSCPSRQTPK
Trigger: TTTGGGGGTCTGTCTGCTGGGGCAGGAATAATCCCAGTTCTCTGACTCTCGCTCTAGAGTTGAGAACAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR CCA 72 bp AATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTaGGTGGGTGCTCCACTCAGCCAGCCAACCAAGAAG +
Preference number: 3 (lower is better)
Translates to: NVYFRRTVWSGV*VGAPLSQPTKK
Trigger: CTTCTTGGTTGGCTGGCTGAGTGGAGCACCCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR CCA 72 bp TGTATAAAATGTTTATTTTCGGAGGACAGTGTGGTCTaGTGTTTGGGTGGGTGCTCCACTCAGCCAGCCAAC +
Preference number: 3 (lower is better)
Translates to: CIKCLFSEDSVV*CLGGCSTQPAN
Trigger: GTTGGCTGGCTGAGTGGAGCACCCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
3UTR TCA 72 bp ACTCTGCCCCTCCTTACAGGGCTACTTCTATACATGTaGAGACACACATGTGTGAACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: TLPLLTGLLLYM*RHTCVNTHTHT
Trigger: TGTGTGTGTGTGTGTGTTCACACATGTGTGTCTTCACATGTATAGAAGTAGCCCTGTAAGGAGGGGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp AAGGAGGAAGGTAAGGTGGCCTTCGGCGGTGGCCTCCTGTGCCCAAACCAGGCTGCTCTCCAGCCCCACTaGCCAGCACCAGAAAGCCGC +
Preference number: 4 (lower is better)
Translates to: KEEGKVAFGGGLLCPNQAALQPH*PAPESR
Trigger: GCGGCTTTCTGGTGCTGGCCAGTGGGGCTGGAGAGC...AGCCTGGTTTGGGCACAGGAGGCCACCGCCGAAGGCCACCTTACCTTCCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR TCA 90 bp AGAGCCCATGTGACGTCTGTAGCACCAGCCACTCTGCCCCTCCTTACAGGGCTACGGAACCCAGCTGCATaGTCAGCTGCAGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RAHVTSVAPATLPLLTGLRNPAA*SAAASS
Trigger: GCTGGATGCTGCAGCTGATCATGCAGCTGGGTTCCG...TAGCCCTGTAAGGAGGGGCAGAGTGGCTGGTGCTACAGACGTCACATGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR TCA 90 bp CTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGAAAAAGGGGCAGCGCGTaGGCAGCACGGAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHLAHPRAHQALPVLNSRKRGSA*AARNPA
Trigger: AGCTGGGTTCCGTGCTGCTCACGCGCTGCCCCTTTT...TCTAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR GCA 90 bp CCATGTGACGTCTGTAGCACCAGCCACTCTGCCCCTCCTTACAGGGCTACTTCTCCAGCCGGTCCTCCTTaGTGTGCTGCAGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PCDVCSTSHSAPPYRATSPAGPP*CAAASR
Trigger: CCTACTCGCTGCAGCACAGCAAGGAGGACCGGCTGG...AGAAGTAGCCCTGTAAGGAGGGGCAGAGTGGCTGGTGCTACAGACGTCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp CCTGCCCCAGCAGACAGACCCCCAAAGAGCCCATGTGACGTCTGTAGCACCAGCCATCAGCTCCCCTCCTaGAAGATGGTTCAGGTACGC +
Preference number: 4 (lower is better)
Translates to: PAPADRPPKSPCDVCSTSHQLPS*KMVQVR
Trigger: GCGTACCTGAACCATCTTCCAGGAGGGGAGCTGATG...GCTGGTGCTACAGACGTCACATGGGCTCTTTGGGGGTCTGTCTGCTGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp CCTGCCCCAGCAGACAGACCCCCAAAGAGCCCATGTGACGTCTGTAGCACCAGCAGCACGAAGAACAGCTaGACCATCAGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAPADRPPKSPCDVCSTSSTKNS*TISSPP
Trigger: AGGAGGGGAGCTGATGGTCCAGCTGTTCTTCGTGCT...GCTGGTGCTACAGACGTCACATGGGCTCTTTGGGGGTCTGTCTGCTGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp GCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGAGCGAGAGTCATGCCCAGGAACACTTaGCCAGTGGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AHPRAHQALPVLNSRARVMPRNT*PVDCRE
Trigger: TTCCCTGCAGTCCACTGGCCAAGTGTTCCTGGGCAT...GACTCTCGCTCTAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR TCA 90 bp TGCTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTACCAGAAAGCCGCCAATaGTGGCAACTGTGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSTLHIPEHTRPCLFSTLPESRQ*WQLCEN
Trigger: ATTCTCGCACAGTTGCCATCATTGGCGGCTTTCTGG...TAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp TGCTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTACCGAGTAGCTTCATCTaGTTCCAGAACTCGACGCGT +
Preference number: 4 (lower is better)
Translates to: CSTLHIPEHTRPCLFSTLPSSFI*FQNSTR
Trigger: ACGCGTCGAGTTCTGGAACCAGATGAAGCTACTCGG...TAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp CATTTGCTTACTTCCAGATCTTCCTCTGTCCCCAACTTCTACCTGCACCCCAGCGGAACACTTGGCCAGTaGACTGCAGGGAACGGCTTC +
Preference number: 4 (lower is better)
Translates to: HLLTSRSSSVPNFYLHPSGTLGQ*TAGNGF
Trigger: GAAGCCGTTCCCTGCAGTCCACTGGCCAAGTGTTCC...GCTGGGGTGCAGGTAGAAGTTGGGGACAGAGGAAGATCTGGAAGTAAGCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR GCA 90 bp TGTCTGTATAAAATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTGGGTGGCGGCAGCCCCAAAGATaGCCACACTCTCGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: CLYKMFIFGGQCGLVFGWRQPQR*PHSRRV
Trigger: TACTCGGCGAGAGTGTGGGCATCTTTGGGGCTGCCG...CCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTTTATACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp TGTCTGTATAAAATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTGGGTGGTCCCCTCCTGGAAGATaGTTCAGGTACGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: CLYKMFIFGGQCGLVFGWSPPGR*FRYASR
Trigger: CCGGCTGGCGTACCTGAACCATCTTCCAGGAGGGGA...CCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTTTATACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR GCA 90 bp TGTCTGTATAAAATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTGGGTGGAGCACGGAACCCAGCTaGATGATCAGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CLYKMFIFGGQCGLVFGWSTEPS*MISCSI
Trigger: GATGCTGCAGCTGATCATGCAGCTGGGTTCCGTGCT...CCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTTTATACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CCA 90 bp TGTCTGTATAAAATGTTTATTTTCGGAGGACAGTGTGGTCTGGTGTTTGGGTGGGCGTACAACATAAGTTaGCTGAAGCAGCCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CLYKMFIFGGQCGLVFGWAYNIS*LKQPQK
Trigger: CTTTTGGGGCTGCTTCAGCCAACTTATGTTGTACGC...CCACCCAAACACCAGACCACACTGTCCTCCGAAAATAAACATTTTATACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS TCA 90 bp AGTCCCCGTAGTGGACATAGCCCCCGATGTAAGCGGTGTAGGTGCTaGTGGCTAGCTGCAGCGCGGCGCCCAACGCAAACCAACGCCGCT +
Preference number: 5 (lower is better)
Translates to: SPRSGHSPRCKRCRC*WLAAARRPTQTNAA
Trigger: AGCGGCGTTGGTTTGCGTTGGGCGCCGCGCTGCAGCTAGCCATCAGCACCTACACCGCTTACATCGGGGGCTATGTCCACTACGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CCA 90 bp GACCCCATAAAGCACGAAGAACAGCTGGACCATCAGCTCCCCTCCTaGAAGATGGTTCAGGTACGCCAGCCGGTCCTCCTTGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: DPIKHEEQLDHQLPS*KMVQVRQPVLLAVL
Trigger: CAGCACAGCAAGGAGGACCGGCTGGCGTACCTGAACCATCTTCCAGGAGGGGAGCTGATGGTCCAGCTGTTCTTCGTGCTTTATGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CAA 90 bp TGCTCCACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGATGCCCAGGAACACTaGGCCAGTGGACTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CSTLHIPEHTRPCLFSTLDAQEH*ASGLQG
Trigger: TCCCTGCAGTCCACTGGCCAAGTGTTCCTGGGCATC...TAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS-3UTR CAA 90 bp CACCTTGCACATCCCAGAGCACACCAGGCCCTGCCTGTTCTCAACTCTAGAGCGAGCGTACAACATAAGTaGGCTGAAGCAGCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: HLAHPRAHQALPVLNSRASVQHK*AEAAPK
Trigger: TTTTGGGGCTGCTTCAGCCAACTTATGTTGTACGCT...CGCTCTAGAGTTGAGAACAGGCAGGGCCTGGTGTGCTCTGGGATGTGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS TCA 72 bp AGTGGACATAGCCCCCGATGTAAGCGGTGTAGGTGCTaGTGGCTAGCTGCAGCGCGGCGCCCAACGCAAACC +
Preference number: 6 (lower is better)
Translates to: SGHSPRCKRCRC*WLAAARRPTQT
Trigger: GGTTTGCGTTGGGCGCCGCGCTGCAGCTAGCCATCAGCACCTACACCGCTTACATCGGGGGCTATGTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS GCA 72 bp CAAAAGGGGCAGCGCGTGAGCAGCACGGAACCCAGCTaGATGATCAGCTGCAGCATCCAGCGTCTCGATCCA +
Preference number: 6 (lower is better)
Translates to: QKGQRVSSTEPS*MISCSIQRLDP
Trigger: TGGATCGAGACGCTGGATGCTGCAGCTGATCATGCAGCTGGGTTCCGTGCTGCTCACGCGCTGCCCCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CCA 72 bp AAGAACAGCTGGACCATCAGCTCCCCTCCTGGAAGATaGTTCAGGTACGCCAGCCGGTCCTCCTTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: KNSWTISSPPGR*FRYASRSSLLC
Trigger: GCACAGCAAGGAGGACCGGCTGGCGTACCTGAACCATCTTCCAGGAGGGGAGCTGATGGTCCAGCTGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CAA 90 bp CTGCAGCGAGTAGGCCACACAAATGAGGTAGATGCCCAGGAACACTaGGCCAGTGGACTGCAGGGAACGGCTTCGGGGCTTTCGACGGTA +
Preference number: 6 (lower is better)
Translates to: LQRVGHTNEVDAQEH*ASGLQGTASGLSTV
Trigger: TACCGTCGAAAGCCCCGAAGCCGTTCCCTGCAGTCCACTGGCCAAGTGTTCCTGGGCATCTACCTCATTTGTGTGGCCTACTCGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CCA 72 bp AAGCACGAAGAACAGCTGGACCATCAGCTCCCCTCCTaGAAGATGGTTCAGGTACGCCAGCCGGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: KHEEQLDHQLPS*KMVQVRQPVLL
Trigger: AAGGAGGACCGGCTGGCGTACCTGAACCATCTTCCAGGAGGGGAGCTGATGGTCCAGCTGTTCTTCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CAA 72 bp GTAGGCCACACAAATGAGGTAGATGCCCAGGAACACTaGGCCAGTGGACTGCAGGGAACGGCTTCGGGGCTT +
Preference number: 6 (lower is better)
Translates to: VGHTNEVDAQEH*ASGLQGTASGL
Trigger: AAGCCCCGAAGCCGTTCCCTGCAGTCCACTGGCCAAGTGTTCCTGGGCATCTACCTCATTTGTGTGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7
CDS CCA 72 bp CCAAAGATGCCCACACTCTCGCCGAGTAGCTTCATCTaGTTCCAGAACTCGACGCGTCGTGTGTTGTGCCAA +
Preference number: 6 (lower is better)
Translates to: PKMPTLSPSSFI*FQNSTRRVLCQ
Trigger: TTGGCACAACACACGACGCGTCGAGTTCTGGAACCAGATGAAGCTACTCGGCGAGAGTGTGGGCATCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021296.7