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Pregenerated sensors for TMEM100 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069763

Ensembl transcript IDs: ENSMUST00000092788.4

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTCTCTATGCCCTATTTTTCATTTTGGTAGTTCATTCGAAAGTTaGGCTCATCCGGTACCGGGCTGGTTTCCTATGAATGAGTTCACT +
Preference number: 1 (lower is better)
Translates to: SSLCPIFHFGSSFES*AHPVPGWFPMNEFT
Trigger: AGTGAACTCATTCATAGGAAACCAGCCCGGTACCGGATGAGCTCAACTTTCGAATGAACTACCAAAATGAAAAATAGGGCATAGAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
3UTR CCA 90 bp AACTTCTTAGGTACGTGGGAATGCCAAGCCAATGTAGGCTTTTGGTaGAACGTTTTTATAACACCACTTGCCAGGGCTCTCATTATTTGT +
Preference number: 1 (lower is better)
Translates to: NFLGTWECQANVGFW*NVFITPLARALIIC
Trigger: ACAAATAATGAGAGCCCTGGCAAGTGGTGTTATAAAAACGTTCCACCAAAAGCCTACATTGGCTTGGCATTCCCACGTACCTAAGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
3UTR CCA 90 bp ATAACACCACTTGCCAGGGCTCTCATTATTTGTCCATTCTTCCCTTaGGTACTTTCTAAATGGAACCAACTGTTATTTAATGCTGTGCAT +
Preference number: 1 (lower is better)
Translates to: ITPLARALIICPFFP*VLSKWNQLLFNAVH
Trigger: ATGCACAGCATTAAATAACAGTTGGTTCCATTTAGAAAGTACCCAAGGGAAGAATGGACAAATAATGAGAGCCCTGGCAAGTGGTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
3UTR CCA 72 bp GGTACGTGGGAATGCCAAGCCAATGTAGGCTTTTGGTaGAACGTTTTTATAACACCACTTGCCAGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: GTWECQANVGFW*NVFITPLARAL
Trigger: GAGAGCCCTGGCAAGTGGTGTTATAAAAACGTTCCACCAAAAGCCTACATTGGCTTGGCATTCCCACGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
3UTR TCA 72 bp TGCCCTATTTTTCATTTTGGTAGTTCATTCGAAAGTTaGGCTCATCCGGTACCGGGCTGGTTTCCTATGAAT +
Preference number: 3 (lower is better)
Translates to: CPIFHFGSSFES*AHPVPGWFPMN
Trigger: ATTCATAGGAAACCAGCCCGGTACCGGATGAGCTCAACTTTCGAATGAACTACCAAAATGAAAAATAGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
3UTR CCA 72 bp ATTATTTGTCCATTCTTCCCTTGGGTACTTTCTAAATaGAACCAACTGTTATTTAATGCTGTGCATCTCCCA +
Preference number: 3 (lower is better)
Translates to: IICPFFPWVLSK*NQLLFNAVHLP
Trigger: TGGGAGATGCACAGCATTAAATAACAGTTGGTTCCATTTAGAAAGTACCCAAGGGAAGAATGGACAAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR TCA 90 bp TTAGGGTTAAGTTTGTCGTTAAAGATGAGTTATTCCCTACCAAGGGGGAACCGTCCACGGCAAAGGGGATaGTGCAGCGGTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGLSLSLKMSYSLPRGNRPRQRG*CSGSRR
Trigger: TCTCCTGCTACCGCTGCATCATCCCCTTTGCCGTGG...ACGGTTCCCCCTTGGTAGGGAATAACTCATCTTTAACGACAAACTTAACCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR TCA 90 bp TTTTTCATTTTGGTAGTTCATTCGAAAGTTGAGCTCATCCGGTACCGGGCTGGTTGGAACCATGGGAATTaGAGCTGTAAGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: FFILVVHSKVELIRYRAGWNHGN*SCKPQR
Trigger: CCGCTGTGGCTTACAGCTTCAATTCCCATGGTTCCA...ACCAGCCCGGTACCGGATGAGCTCAACTTTCGAATGAACTACCAAAATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR CCA 90 bp GTACTTTCTAAATGGAACCAACTGTTATTTAATGCTGTGCATCTCCCACACTCCCCACAACTTCCCTCTTaGGGTTTTTCTCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: VLSKWNQLLFNAVHLPHSPQLPS*GFSPLS
Trigger: TGACAATGGAGAAAAACCCCAAGAGGGAAGTTGTGG...GGAGTGTGGGAGATGCACAGCATTAAATAACAGTTGGTTCCATTTAGAAAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS TCA 90 bp AGCACCTCTGATTTACCACAAGAGCGGTCTGACTCTCGCGTCTCTTaGCTTTCTTGTTCCTTTGTCTCACCTTCCAGCACAAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: STSDLPQERSDSRVS*LSCSFVSPSSTRHW
Trigger: CCAGTGCCTTGTGCTGGAAGGTGAGACAAAGGAACAAGAAAGTCAAGAGACGCGAGAGTCAGACCGCTCTTGTGGTAAATCAGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR CAA 90 bp TTTTTCATTTTGGTAGTTCATTCGAAAGTTGAGCTCATCCGGTACCGGGCTGGTCAGGTGTGGGAGATTTaGGAGCTCCCAGGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FFILVVHSKVELIRYRAGQVWEI*ELPGSL
Trigger: AAGAGAACCTGGGAGCTCCAAAATCTCCCACACCTG...ACCAGCCCGGTACCGGATGAGCTCAACTTTCGAATGAACTACCAAAATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR CAA 90 bp TGGTTTCCTATGAATGAGTTCACTGAGTTAGAGCAGTGTGGGCGGGTGAGCGTTGACTTTCTTGTTCCTTaGTCTCACCTTCCAGCACAA +
Preference number: 5 (lower is better)
Translates to: WFPMNEFTELEQCGRVSVDFLVP*SHLPAQ
Trigger: TTGTGCTGGAAGGTGAGACAAAGGAACAAGAAAGTC...AACGCTCACCCGCCCACACTGCTCTAACTCAGTGAACTCATTCATAGGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR CAA 90 bp CTTAGGGTTAAGTTTGTCGTTAAAGATGAGTTATTCCCTACCAAGGGGGAACCGTGGGGTTTTTCTCCATaGTCACAGGTGTGGGAGATT +
Preference number: 5 (lower is better)
Translates to: LRVKFVVKDELFPTKGEPWGFSP*SQVWEI
Trigger: AATCTCCCACACCTGTGACAATGGAGAAAAACCCCA...CGGTTCCCCCTTGGTAGGGAATAACTCATCTTTAACGACAAACTTAACCCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4
CDS-3UTR CAA 90 bp CTTAGGGTTAAGTTTGTCGTTAAAGATGAGTTATTCCCTACCAAGGGGGAACCGACCACAACTTCCCTCTaGGGGTTTTTCTCCATTGTC +
Preference number: 5 (lower is better)
Translates to: LRVKFVVKDELFPTKGEPTTTSL*GFFSIV
Trigger: GACAATGGAGAAAAACCCCAAGAGGGAAGTTGTGGT...CGGTTCCCCCTTGGTAGGGAATAACTCATCTTTAACGACAAACTTAACCCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000092788.4