Pregenerated sensors for TMEFF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026109Ensembl transcript IDs: ENSMUST00000081851.4, ENSMUST00000114565.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTaGCCATTCATACCTGTCTGCTCGTATCTCATAGGGGTTGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SYSLRMFSTYFPQAM*PFIPVCSYLIGVES Trigger: GCTTTCAACCCCTATGAGATACGAGCAGACAGGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR CCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTGTAGTCCAAGCTGTTaGTTGTCCGGCCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ISLDLGITQNLATDSCANCSPSC*LSGHWE Trigger: TTCCCAGTGGCCGGACAACCAACAGCTTGGACTACA...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCGTAGCCCATGACAGTTaGACCGTGCTTACAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: FILFLENVLNLLSPSNVTVAHDS*TVLTAM Trigger: CATAGCTGTAAGCACGGTCCAACTGTCATGGGCTAC...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR TCA 90 bp | TGGACAACACATTCAACTACTCCTTCCAACACTGTCCTGTCCAAGACTATTTACAGTTTCCTTCTGGTTTaGCTTTATTCCCCAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: WTTHSTTPSNTVLSKTIYSFLLV*LYSPKC Trigger: ACACTTTGGGGAATAAAGTCAAACCAGAAGGAAACT...GTAAATAGTCTTGGACAGGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR CAA 90 bp | TTACCACAAACGCAAGGCAACATGTGTAGATCTTGTCTTATTCTTTaGTCTCTAATACTGTATTGTGTAGTCCAAGCTGTTGGTTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: LPQTQGNMCRSCLIL*SLILYCVVQAVGCP Trigger: CGGACAACCAACAGCTTGGACTACACAATACAGTATTAGAGACAAAAGAATAAGACAAGATCTACACATGTTGCCTTGCGTTTGTGGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCAGCTACAGATTCCTGTaGAAACTAATGTGTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLENVLNLLSPSNVTIHTSYRFL*KLMCCL Trigger: CAGACAACACATTAGTTTGCACAGGAATCTGTAGCT...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCAATATCTTGCCTTTATaGTACATGGACAGTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSNILPL*YMDSSL Trigger: CAGAGAACTGTCCATGTATCATAAAGGCAAGATATT...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTTGCCTTTATGATACATaGACAGTTCTCTGCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: KFLLCILDNTFNYSFQHCCLYDT*TVLCNP Trigger: TGGGTTGCAGAGAACTGTCCATGTATCATAAAGGCA...ACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR CAA 90 bp | CAAATAAGATACAAATACAGCAAGGGTCTTCTAAGAAGCCACAGTTaGGGCTCATACTTACTGACACAGTTACAATGTACTCTTAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QIRYKYSKGLLRSHS*GSYLLTQLQCTLSF Trigger: AAAGCTAAGAGTACATTGTAACTGTGTCAGTAAGTATGAGCCCAAACTGTGGCTTCTTAGAAGACCCTTGCTGTATTTGTATCTTATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCGATGATTCAAGGATATaGCATATCTTATGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FILFLENVLNLLSPSNVTDDSRI*HILCFL Trigger: GAGGAAGCATAAGATATGTCATATCCTTGAATCATC...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCTTAAGTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCACATGGACAGTTCTCTaGAACCCACTAAGTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FVLSFYCASWTTHSTTPSTWTVL*NPLSFL Trigger: AAGGAAACTTAGTGGGTTGCAGAGAACTGTCCATGT...GGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAACTTAAGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCACAGCTATGAATTACTaGAAGTTTAGGAATGCCATT | + |
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Preference number: 2 (lower is better) Translates to: FILFLENVLNLLSPSNVTTAMNY*KFRNAI Trigger: AATGGCATTCCTAAACTTGCAGTAATTCATAGCTGT...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACAGTACATGTTTTCATTaGTGTAGATTACCACAAACG | + |
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Preference number: 2 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYSTCFH*CRLPQT Trigger: CGTTTGTGGTAATCTACACCAATGAAAACATGTACT...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR TCA 72 bp | CACAGAGGGATGAAATACTGCTGTCTGCGTAGCCCATaGCAGTTGGACCGTGCTTACAGCTATGAATTACTG | + |
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Preference number: 3 (lower is better) Translates to: HRGMKYCCLRSP*QLDRAYSYELL Trigger: CAGTAATTCATAGCTGTAAGCACGGTCCAACTGTCATGGGCTACGCAGACAGCAGTATTTCATCCCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACAGTCCAAGCTGTTGGTaGTCCGGCCACTGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYSPSCW*SGHWET Trigger: TGTTTCCCAGTGGCCGGACAACCAACAGCTTGGACT...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR TCA 72 bp | TTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTaGCCATTCATACCTGTCTGCTCGTATCTCATAGGG | + |
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Preference number: 3 (lower is better) Translates to: LRMFSTYFPQAM*PFIPVCSYLIG Trigger: CCCTATGAGATACGAGCAGACAGGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCGTGCAAACTAATGTGTaGTCTGAAGATGCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: FLENVLNLLSPSNVTIHTVQTNV*SEDAQR Trigger: CCTCTGTGCATCTTCAGACAACACATTAGTTTGCAC...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR TCA 72 bp | CACAGCAGGACACAGAATAGCAATATCTTGCCTTTATaGTACATGGACAGTTCTCTGCAACCCACTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: HSRTQNSNILPL*YMDSSLQPTKF Trigger: AAACTTAGTGGGTTGCAGAGAACTGTCCATGTATCATAAAGGCAAGATATTGCTATTCTGTGTCCTGCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR CCA 72 bp | GGACACAGAATAGCAATATCTTGCCTTTATGATACATaGACAGTTCTCTGCAACCCACTAAGTTTCCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GHRIAISCLYDT*TVLCNPLSFLL Trigger: CAGAAGGAAACTTAGTGGGTTGCAGAGAACTGTCCATGTATCATAAAGGCAAGATATTGCTATTCTGTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTGTCTCTAATACTGTATaGTGTAGTCCAAGCTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: AVVHVFIGVDYHKRKATCVSNTV*CSPSCW Trigger: CCAACAGCTTGGACTACACAATACAGTATTAGAGAC...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| 3UTR GCA 72 bp | AATTATTCCACAGCAGGACACAGAATAGCAATATCTTaGCTTTATGATACATGGACAGTTCTCTGCAACCCA | + |
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Preference number: 3 (lower is better) Translates to: NYSTAGHRIAIS*LYDTWTVLCNP Trigger: TGGGTTGCAGAGAACTGTCCATGTATCATAAAGGCAAGATATTGCTATTCTGTGTCCTGCTGTGGAATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| 3UTR TCA 72 bp | TCTAACAAAGGAGGGGATGCCATTTCTTTTAGTCCATaGAGAAGTCATTTGAGGAAGACAAATAAAGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: SNKGGDAISFSP*RSHLRKTNKAL Trigger: TAAAGCTTTATTTGTCTTCCTCAAATGACTTCTTCATGGACTAAAAGAAATGGCATCCCCTCCTTTGTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR GCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCGTCCAGCTGCTGCACTaGCGCGGGGACTCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTVQLLH*RGDSHS Trigger: GCTGTGGGAGTCCCCGCGGCAGTGCAGCAGCTGGAC...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR GCA 90 bp | ATATCTTGCCTTTATGATACATGGACAGTTCTCTGCAACCCACTAAGTTTCCTTGTCCAGCTGCTGCACTaGCGCGGGGACTCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: ISCLYDTWTVLCNPLSFLVQLLH*RGDSHS Trigger: GCTGTGGGAGTCCCCGCGGCAGTGCAGCAGCTGGAC...AAGGAAACTTAGTGGGTTGCAGAGAACTGTCCATGTATCATAAAGGCAAGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR GCA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCAAAGTGTCCAGCTGCTaGACTGCCGCGGGGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSKVSSC*TAAGTP Trigger: GGGAGTCCCCGCGGCAGTGCAGCAGCTGGACACTTT...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR GCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACAAAGTGTCCAGCTGCTaGACTGCCGCGGGGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANKVSSC*TAAGTP Trigger: GGGAGTCCCCGCGGCAGTGCAGCAGCTGGACACTTT...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCGTGGATGTCTCCTTCTaGCTGGTCTCGCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTVDVSF*LVSPEP Trigger: AGGCTCTGGCGAGACCAGTCAGAAGGAGACATCCAC...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTGGGGCATTTCCTTGTaGTGCAGAGGACCACCACGC | + |
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Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANWGISL*CRGPPR Trigger: GCGTGGTGGTCCTCTGCATCACAAGGAAATGCCCCA...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCCAGCCGGTGGGCGTTTaGCAGTCACTTAAGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTQPVGV*QSLKEV Trigger: TACCTCCTTAAGTGACTGCCAAACGCCCACCGGCTG...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCCAGCCGGTGGGCGTTTaGCAGTCACTTAAGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSQPVGV*QSLKEV Trigger: TACCTCCTTAAGTGACTGCCAAACGCCCACCGGCTG...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR CCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCAGCAGTTCCAGCCGGTaGGCGTTTGGCAGTCACTTA | + |
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Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTSSSSR*AFGSHL Trigger: TAAGTGACTGCCAAACGCCCACCGGCTGGAACTGCT...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | TATTCCACAGCAGGACACAGAATAGCAATATCTTGCCTTTATGATACATGGACAAGCAGTTCCAGCCGGTaGGCGTTTGGCAGTCACTTA | + |
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Preference number: 4 (lower is better) Translates to: YSTAGHRIAISCLYDTWTSSSSR*AFGSHL Trigger: TAAGTGACTGCCAAACGCCCACCGGCTGGAACTGCT...TGTCCATGTATCATAAAGGCAAGATATTGCTATTCTGTGTCCTGCTGTGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR CCA 90 bp | TGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTAATGTGTTGTCTGTCGCCAGAGCCTTCATaGACTCCATCTCCAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: WNHSKSSYRFLCKLMCCLSPEPS*TPSPDP Trigger: GGGATCTGGAGATGGAGTCCATGAAGGCTCTGGCGA...CAGACAACACATTAGTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTTTAAGCAACAAACCTATGAAGCAGAGACCCGAGTGTGTGTGTGGTGTCACAGTAAGCAGATGGTaGTGGCAAGAATCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSLSNKPMKQRPECVCGVTVSRW*WQESCL Trigger: GAGACAAGATTCTTGCCACCACCATCTGCTTACTGT...GACACCACACACACACTCGGGTCTCTGCTTCATAGGTTTGTTGCTTAAACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR TCA 90 bp | TGGACAACACATTCAACTACTCCTTCCAACACTGTCCTGTCCAAGACTATTTACCTGTTACACTTGAACTaGCAGACGCAAGTCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: WTTHSTTPSNTVLSKTIYLLHLN*QTQVTV Trigger: CACTGTGACTTGCGTCTGTCAGTTCAAGTGTAACAG...GTAAATAGTCTTGGACAGGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR CCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTGGCAAATGTCACAGGTaGATGTCTCCTTCTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCGKCHR*MSPSDW Trigger: CCAGTCAGAAGGAGACATCCACCTGTGACATTTGCC...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTATGGCTCCTGCATATTaGTGGAGTGTTCACACTTCC | + |
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Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCMAPAY*WSVHTS Trigger: GGAAGTGTGAACACTCCATCAATATGCAGGAGCCAT...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCGGACCACCACGCAGATaGCAGCAATCTGAATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FILFLENVLNLLSPSNVTGPPRR*QQSELF Trigger: GAACAATTCAGATTGCTGTCATCTGCGTGGTGGTCC...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | TGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTAATGTGTTGTCTGATGTCTCCTTCTGACTaGTCTCGCCAGAGCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: WNHSKSSYRFLCKLMCCLMSPSD*SRQSLH Trigger: ATGAAGGCTCTGGCGAGACCAGTCAGAAGGAGACAT...CAGACAACACATTAGTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACCTGTTACACTTGAACTaGCAGACGCAAGTCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYLLHLN*QTQVTV Trigger: CACTGTGACTTGCGTCTGTCAGTTCAAGTGTAACAG...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACAGCACAGGATCCTTCTaGGACCACAAGTATCTCACT | + |
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Preference number: 4 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYSTGSF*DHKYLT Trigger: AGTGAGATACTTGTGGTCTCAGAAGGATCCTGTGCT...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR GCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTATCTTCATCACACTCTaGCCCAAACTGGCAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCIFITL*PKLANV Trigger: GACATTTGCCAGTTTGGGGCAGAGTGTGATGAAGAT...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCTCTGGGCAAGGTATGTaGTGTTCTCTGGCACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FILFLENVLNLLSPSNVTSGQGM*CSLALS Trigger: AGAAAGTGCCAGAGAACACCACATACCTTGCCCAGA...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR CCA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCCAGACAGTAAGCAGATaGTGGTGGCAAGAATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSQTVSR*WWQESC Trigger: ACAAGATTCTTGCCACCACCATCTGCTTACTGTCTG...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
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| CDS-3UTR TCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACAGTCACTGTTACACTTaGACTGACAGACGCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYSHCYT*TDRRKS Trigger: TGACTTGCGTCTGTCAGTTCAAGTGTAACAGTGACT...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS-3UTR TCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTCTCCTGTTTCTGACATaGCGCTTCTTTGATTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCLLFLT*RFFDLT Trigger: TGTCAAATCAAAGAAGCGTCATGTCAGAAACAGGAG...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTTTTGCTTCTGTCTGTaGATTCTGTTGCTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANFCFCL*ILLLLG Trigger: CCCCAGAAGCAACAGAATTCACAGACAGAAGCAAAA...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCTCTTGTTGTGTTGTCTaGACTGTAGTGCCCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTSCCVV*TVVPCI Trigger: AATACAGGGCACTACAGTTCAGACAACACAACAAGA...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCTTACATTGGCTCCTATaGAAATCCCCAGACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSLHWLL*KSPDSK Trigger: CTTACTGTCTGGGGATTTTCATAGGAGCCAATGTAA...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR GCA 90 bp | TGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTAATGTGTTGTCTGCTGCAAGATGGCTCCTaGATATTGATGGAGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WNHSKSSYRFLCKLMCCLLQDGS*ILMECS Trigger: TGAACACTCCATCAATATGCAGGAGCCATCTTGCAG...CAGACAACACATTAGTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTTGTTCCAATCACAGCTaGAATCAAGACGTACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCCSNHS*NQDVLE Trigger: TTCCAGTACGTCTTGATTGCAGCTGTGATTGGAACA...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACGTCTGTGAATTCTGTTaGTTCTGGGGCATTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANVCEFC*FWGISL Trigger: CAAGGAAATGCCCCAGAAGCAACAGAATTCACAGAC...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CCA 90 bp | TGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTAATGTGTTGTCTGATCGCATCTGCAAGATaGCTCCTGCATATTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: WNHSKSSYRFLCKLMCCLIASAR*LLHIDG Trigger: TCCATCAATATGCAGGAGCCATCTTGCAGATGCGAT...CAGACAACACATTAGTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | GTCTTAAGTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACAGTCACTGTTACACTTaGACTGACAGACGCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSFYCASWTTHSTTPSNSHCYT*TDRRKS Trigger: TGACTTGCGTCTGTCAGTTCAAGTGTAACAGTGACT...GTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAACTTAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACGGATTGAAGTTGGTTTaGGAACAGTCTATGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYGLKLV*EQSMLH Trigger: GTGCAACATAGACTGTTCTCAAACCAACTTCAATCC...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACATCGACCCAGAGACATaGCTTCAATTTTCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANIDPET*LQFSPV Trigger: AACAGGAGAAAATTGAAGTCATGTCTCTGGGTCGAT...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACCAGATGACAGCAATCTaGATTGTTCCAATCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYQMTAI*IVPITA Trigger: AGCTGTGATTGGAACAATTCAGATTGCTGTCATCTG...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGTTTAAGCAACAAACCTATGAAGCAGAGACCCGAGTGTGTGTGTGGTCCACTGTCTAAACAGTaGCTCACTGTTTATTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLSNKPMKQRPECVCGPLSKQ*LTVYFY Trigger: GTAAAAATAAACAGTGAGGCACTGTTTAGACAGTGG...ACCACACACACACTCGGGTCTCTGCTTCATAGGTTTGTTGCTTAAACTTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTCAAATTTACAGGTGTTaGTGTCACACAGGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVHVFIGVDYHKRKATCQIYRC*CHTGRD Trigger: ATCTCTTCCTGTGTGACACCAACACCTGTAAATTTG...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| 3UTR CAA 72 bp | TACAAATACAGCAAGGGTCTTCTAAGAAGCCACAGTTaGGGCTCATACTTACTGACACAGTTACAATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YKYSKGLLRSHS*GSYLLTQLQCT Trigger: AGTACATTGTAACTGTGTCAGTAAGTATGAGCCCAAACTGTGGCTTCTTAGAAGACCCTTGCTGTATTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR GCA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCTGCATAATCTGTTCTTaGATAATGCCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLENVLNLLSPSNVTIHTCIICS*IMPIFR Trigger: TCTGAAGATGGGCATTATGCAAGAACAGATTATGCA...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CCA 90 bp | ATATCCCTTGATCTTGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACACCATTATAATGTTCTaGGCAAGGTATGTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLDLGITQNLATDSCANTIIMF*ARYVVF Trigger: GAACACCACATACCTTGCCCAGAACATTATAATGGT...GTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCAAGATCAAGGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCGACATGACGCTTCTTTaGTTTGACATGCATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FILFLENVLNLLSPSNVTDMTLL*FDMHYH Trigger: ATGATAATGCATGTCAAATCAAAGAAGCGTCATGTC...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTATTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTTTCTCCTGTTTCTaGCATGACGCTTCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FILFLENVLNLLSPSNVTIFSCF*HDASLI Trigger: AATCAAAGAAGCGTCATGTCAGAAACAGGAGAAAAT...GGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAATAAGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS TCA 90 bp | CACTCTGCCCCAAACTGGCAAATGTCACAGGTGGATGTCTCCTTCTaGCTGGTCTCGCCAGAGCCTTCATGGACTCCATCTCCAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSAPNWQMSQVDVSF*LVSPEPSWTPSPDP Trigger: GGGATCTGGAGATGGAGTCCATGAAGGCTCTGGCGAGACCAGTCAGAAGGAGACATCCACCTGTGACATTTGCCAGTTTGGGGCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS CCA 90 bp | CAGCATCTTCATCACACTCTGCCCCAAACTGGCAAATGTCACAGGTaGATGTCTCCTTCTGACTGGTCTCGCCAGAGCCTTCATGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: QHLHHTLPQTGKCHR*MSPSDWSRQSLHGL Trigger: GAGTCCATGAAGGCTCTGGCGAGACCAGTCAGAAGGAGACATCCACCTGTGACATTTGCCAGTTTGGGGCAGAGTGTGATGAAGATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS TCA 90 bp | CATTTCCTTGTGATGCAGAGGACCACCACGCAGATGACAGCAATCTaGATTGTTCCAATCACAGCTGCAATCAAGACGTACTGGAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLVMQRTTTQMTAI*IVPITAAIKTYWNR Trigger: CCGGTTCCAGTACGTCTTGATTGCAGCTGTGATTGGAACAATTCAGATTGCTGTCATCTGCGTGGTGGTCCTCTGCATCACAAGGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS CCA 90 bp | TACATTGGCTCCTATGAAAATCCCCAGACAGTAAGCAGATGGTGGTaGCAAGAATCTTGTCTCTGTGATTCCCTTGGCAGCTTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YIGSYENPQTVSRWW*QESCLCDSLGSFSL Trigger: CAAAGAGAAGCTGCCAAGGGAATCACAGAGACAAGATTCTTGCCACCACCATCTGCTTACTGTCTGGGGATTTTCATAGGAGCCAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCCTGTTTGCAGGCAGCTaGCCTCAGGTAGCACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: FLENVLNLLSPSNVTIHTLFAGS*PQVALI Trigger: AATGAGTGCTACCTGAGGCAAGCTGCCTGCAAACAG...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | GTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCCTGTTTGCAGGCAGCTaGCCTCAGGTAGCACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VFIVHLGQHIQLLLPTLSLFAGS*PQVALI Trigger: AATGAGTGCTACCTGAGGCAAGCTGCCTGCAAACAG...GGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACATCTCACTCTGCTGTTaGCAGGCAGCTTGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYISLCC*QAACLR Trigger: CCTGAGGCAAGCTGCCTGCAAACAGCAGAGTGAGAT...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS CCA 90 bp | CAGTGTCTCCAATCCTTAAACATTCCCCGTCAAATTTACAGGTGTTaGTGTCACACAGGAAGAGATCATTTTCTCTGTCATCGTAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: QCLQSLNIPRQIYRC*CHTGRDHFLCHRNR Trigger: CCGGTTACGATGACAGAGAAAATGATCTCTTCCTGTGTGACACCAACACCTGTAAATTTGACGGGGAATGTTTAAGGATTGGAGACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081851.4 ENSMUST00000114565.8 |
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| CDS-3UTR CAA 90 bp | ATGGACAGTTCTCTGCAACCCACTAAGTTTCCTTCTGGTTTGACTTTATTCCCCCAGCTTCTCTTTGTCTaGAGTTCCAGGTCCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: MDSSLQPTKFPSGLTLFPQLLFV*SSRSSL Trigger: TAATGAGGACCTGGAACTCAAGACAAAGAGAAGCTG...GGGGAATAAAGTCAAACCAGAAGGAAACTTAGTGGGTTGCAGAGAACTGTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | TTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCTGTCGTCTCTGTGATTCCCTaGGCAGCTTCTCTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLCILDNTFNYSFQHCPVVSVIP*AASLCL Trigger: AAGACAAAGAGAAGCTGCCAAGGGAATCACAGAGAC...GACAGGACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTCTTAAGTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCATCTCACTCTGCTGTTaGCAGGCAGCTTGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FVLSFYCASWTTHSTTPSISLCC*QAACLR Trigger: CCTGAGGCAAGCTGCCTGCAAACAGCAGAGTGAGAT...GGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAACTTAAGACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTGATGGCTCCTGCATATaGATGGAGTGTTCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVVHVFIGVDYHKRKATCDGSCI*MECSHF Trigger: GAAGTGTGAACACTCCATCAATATGCAGGAGCCATC...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTACATGTTTTCATTGGTGTAGATTACCACAAACGCAAGGCAACATGTGTGTGGATGCTCTTGTaGTGTTGTCTGAACTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVVHVFIGVDYHKRKATCVWMLL*CCLNCS Trigger: ACTACAGTTCAGACAACACAACAAGAGCATCCACAC...ACATGTTGCCTTGCGTTTGTGGTAATCTACACCAATGAAAACATGTACTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | TGGAATCACTCAAAATCTAGCTACAGATTCCTGTGCAAACTAATGTGTTGTCTGACCGTGTGGATGCTCTaGTTGTGTTGTCTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: WNHSKSSYRFLCKLMCCLTVWML*LCCLNC Trigger: ACAGTTCAGACAACACAACAAGAGCATCCACACGGT...CAGACAACACATTAGTTTGCACAGGAATCTGTAGCTAGATTTTGAGTGATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCGGGATTGAAGTTGGTTaGAGAACAGTCTATGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLENVLNLLSPSNVTIHTGIEVG*RTVYVA Trigger: TGCAACATAGACTGTTCTCAAACCAACTTCAATCCC...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGAGAATGTTCTCAACTTACTTTCCCCAAGCAATGTGACCATTCATACCCTGCATAATCTGTTCTaGCATAATGCCCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLENVLNLLSPSNVTIHTLHNLF*HNAHLQ Trigger: CTGAAGATGGGCATTATGCAAGAACAGATTATGCAG...GGTATGAATGGTCACATTGCTTGGGGAAAGTAAGTTGAGAACATTCTCAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAACAGAAACAGAATAGGTTTGACCACTGTTTATACACCTAGTGGATACGTAGTGCCCTGTATTTaGCTTCTGTCTGTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRNRNRIGLTTVYTPSGYVVPCI*LLSVNS Trigger: AGAATTCACAGACAGAAGCAAAATACAGGGCACTAC...GTATCCACTAGGTGTATAAACAGTGGTCAAACCTATTCTGTTTCTGTTTCTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS TCA 90 bp | TCACTCCAGCATGTCAGGTTCGCATTTTCGTTCTTTTTAAGGAGATaGGTATTAGATGGGTTACATAGTATTATTTCCTTTGAGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLQHVRFAFSFFLRR*VLDGLHSIISFELV Trigger: GACCAACTCAAAGGAAATAATACTATGTAACCCATCTAATACTCATCTCCTTAAAAAGAACGAAAATGCGAACCTGACATGCTGGAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTTATTGTGCATCTTGGACAACACATTCAACTACTCCTTCCAACACTGTCCTGTTTATTTTTACATaGGCTCCTATGAAAATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFYCASWTTHSTTPSNTVLFIFT*APMKIP Trigger: GGGGATTTTCATAGGAGCCAATGTAAAAATAAACAG...GACAGTGTTGGAAGGAGTAGTTGAATGTGTTGTCCAAGATGCACAATAAAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS TCA 72 bp | CCAAACTGGCAAATGTCACAGGTGGATGTCTCCTTCTaGCTGGTCTCGCCAGAGCCTTCATGGACTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PNWQMSQVDVSF*LVSPEPSWTPS Trigger: AGATGGAGTCCATGAAGGCTCTGGCGAGACCAGTCAGAAGGAGACATCCACCTGTGACATTTGCCAGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS GCA 72 bp | ATCCTTCTGAGACCACAAGTATCTCACTCTGCTGTTTaGAGGCAGCTTGCCTCAGGTAGCACTCATTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ILLRPQVSHSAV*RQLASGSTHSG Trigger: ACCAGAATGAGTGCTACCTGAGGCAAGCTGCCTGCAAACAGCAGAGTGAGATACTTGTGGTCTCAGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081851.4 ENSMUST00000114565.8 |
||
| CDS CCA 72 bp | GGCTCCTATGAAAATCCCCAGACAGTAAGCAGATGGTaGTGGCAAGAATCTTGTCTCTGTGATTCCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSYENPQTVSRW*WQESCLCDSLG Trigger: GCCAAGGGAATCACAGAGACAAGATTCTTGCCACCACCATCTGCTTACTGTCTGGGGATTTTCATAGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS TCA 72 bp | AACCAGCATCGCATCTGCAAGATGGCTCCTGCATATTaGTGGAGTGTTCACACTTCCCATGCATGCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: NQHRICKMAPAY*WSVHTSHACRN Trigger: GTTTCTGCATGCATGGGAAGTGTGAACACTCCATCAATATGCAGGAGCCATCTTGCAGATGCGATGCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS TCA 72 bp | GTGATGCAGAGGACCACCACGCAGATGACAGCAATCTaGATTGTTCCAATCACAGCTGCAATCAAGACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VMQRTTTQMTAI*IVPITAAIKTY Trigger: GTACGTCTTGATTGCAGCTGTGATTGGAACAATTCAGATTGCTGTCATCTGCGTGGTGGTCCTCTGCATCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS CCA 72 bp | TCCTATGAAAATCCCCAGACAGTAAGCAGATGGTGGTaGCAAGAATCTTGTCTCTGTGATTCCCTTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SYENPQTVSRWW*QESCLCDSLGS Trigger: GCTGCCAAGGGAATCACAGAGACAAGATTCTTGCCACCACCATCTGCTTACTGTCTGGGGATTTTCATAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114565.8 |
||
| CDS TCA 72 bp | TTCCCATCAGAAGCACAGAGGGGATTGAAGTTGGTTTaGGAACAGTCTATGTTGCACACACACCAGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: FPSEAQRGLKLV*EQSMLHTHQTS Trigger: GGATGTCTGGTGTGTGTGCAACATAGACTGTTCTCAAACCAACTTCAATCCCCTCTGTGCTTCTGATGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
||
| CDS CCA 72 bp | CAATCCTTAAACATTCCCCGTCAAATTTACAGGTGTTaGTGTCACACAGGAAGAGATCATTTTCTCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QSLNIPRQIYRC*CHTGRDHFLCH Trigger: ATGACAGAGAAAATGATCTCTTCCTGTGTGACACCAACACCTGTAAATTTGACGGGGAATGTTTAAGGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081851.4 ENSMUST00000114565.8 |
||
| CDS TCA 72 bp | CTTCAATTTTCTCCTGTTTCTGACATGACGCTTCTTTaGTTTGACATGCATTATCATAAGATTTCCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQFSPVSDMTLL*FDMHYHKISHQ Trigger: CTGATGGGAAATCTTATGATAATGCATGTCAAATCAAAGAAGCGTCATGTCAGAAACAGGAGAAAATTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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| CDS TCA 72 bp | CAGAGACATGACTTCAATTTTCTCCTGTTTCTGACATaGCGCTTCTTTGATTTGACATGCATTATCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: QRHDFNFLLFLT*RFFDLTCIIIR Trigger: TCTTATGATAATGCATGTCAAATCAAAGAAGCGTCATGTCAGAAACAGGAGAAAATTGAAGTCATGTCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081851.4 |
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