Pregenerated sensors for TMED9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058569Ensembl transcript IDs: ENSMUST00000109905.5, ENSMUST00000224741.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTaGCTCAGCATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LQKVQEWRWEGLSHY*LSISQPGCCPPPEP Trigger: AGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAATGCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR GCA 90 bp | GAGATTCTGAGACACCAAGGGCATCGCCAGCCCCTGAGTGATTACTaGAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACT | + |
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Preference number: 1 (lower is better) Translates to: EILRHQGHRQPLSDY*KRSRSGGGRACPTT Trigger: AGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAATCACTCAGGGGCTGGCGATGCCCTTGGTGTCTCAGAATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR TCA 90 bp | CGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTaGAAACCAGTCCTCCTCCTACTTCCCACAGCCTGGAAGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: RGHAYSPSLLQNICG*KPVLLLLPTAWKKD Trigger: ATCTTTCTTCCAGGCTGTGGGAAGTAGGAGGAGGACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR TCA 90 bp | GCCAAAGGCAAGAAAAGCAAAGTTTCTGGAATAGCAAGGAGTCACTaGTACACCCTGACCTGCTCAAAATCCCACATTAACAAAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: AKGKKSKVSGIARSH*YTLTCSKSHINKGR Trigger: TCTTCCTTTGTTAATGTGGGATTTTGAGCAGGTCAGGGTGTATCAGTGACTCCTTGCTATTCCAGAAACTTTGCTTTTCTTGCCTTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR-3UTR GCA 90 bp | GATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCATTAGCCAGCCAGGCTaGTGTCCTCCACCTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DYCKRSRSGGGRACPTTGISQPG*CPPPEP Trigger: AGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAAT...GCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTGCACTGCAACCCCTCCACACCCTTAAACTGACACGCAGCAAACACACCGTAACACTGAGATTCTaGGACACCAAGGGCATCGCC | + |
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Preference number: 2 (lower is better) Translates to: FCALQPLHTLKLTRSKHTVTLRF*DTKGIA Trigger: GGCGATGCCCTTGGTGTCTCAGAATCTCAGTGTTAC...GGTGTGTTTGCTGCGTGTCAGTTTAAGGGTGTGGAGGGGTTGCAGTGCACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTGCACTGCAACCCCTCCACACCCTTAAACTGACACGCAGCAAACACACCGCAACCTCATATCCCTaGTCAGTAACACTGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: FCALQPLHTLKLTRSKHTATSYP*SVTLRF Trigger: GAATCTCAGTGTTACTGATCAGGGATATGAGGTTGC...GGTGTGTTTGCTGCGTGTCAGTTTAAGGGTGTGGAGGGGTTGCAGTGCACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR CAA 90 bp | CTCTGTAGGCTCTGTTTCCAACCAGCACCAAAGTCTCTGCTTGGTTaGATACCAGTTGTTCAAGCCCCAGAAAGGACAATTGTAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: LCRLCFQPAPKSLLG*IPVVQAPERTIVTN Trigger: GTTTGTTACAATTGTCCTTTCTGGGGCTTGAACAACTGGTATCAAACCAAGCAGAGACTTTGGTGCTGGTTGGAAACAGAGCCTACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR CCA 72 bp | GTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTaGCTCAGCATTAGCCAGCCAGGCTGCTGTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VQEWRWEGLSHY*LSISQPGCCPP Trigger: TGGAGGACAGCAGCCTGGCTGGCTAATGCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR GCA 72 bp | TTGTCCCACTACTGGCTCAGCATTAGCCAGCCAGGCTaGTGTCCTCCACCTGAGCCTGAGGAACGGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LSHYWLSISQPG*CPPPEPEERGH Trigger: GTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAATGCTGAGCCAGTAGTGGGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR TCA 72 bp | GATTCTGAGACACCAAGGGCATCGCCAGCCCCTGAGTaGTTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: DSETPRASPAPE*LLQKVQEWRWE Trigger: CTCCCACCTCCACTCCTGGACCTTTTGCAGTAATCACTCAGGGGCTGGCGATGCCCTTGGTGTCTCAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR TCA 72 bp | CCTTTTGTGCACTGCAACCCCTCCACACCCTTAAACTaGCACGCAGCAAACACACCCTATATAAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PFVHCNPSTPLN*HAANTPYISRL Trigger: CAGCCTGCTTATATAGGGTGTGTTTGCTGCGTGTCAGTTTAAGGGTGTGGAGGGGTTGCAGTGCACAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | AGCATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACAAGCCCAGGGGTGGCTaGCTGGTACTCCTCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SISQPGCCPPPEPEERGHKPRGG*LVLLPL Trigger: CAGCGGGAGGAGTACCAGCCAGCCACCCCTGGGCTT...GTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | ATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTCCAGGGGTGGCTGGCTaGTACTCCTCCCGCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ISQPGCCPPPEPEERGHAPGVAG*YSSRCL Trigger: CAAACAGCGGGAGGAGTACCAGCCAGCCACCCCTGG...AGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTACACTTGGATGTCAAGGTaGACCCTCAGCATCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SQPGCCPPPEPEERGHAYTWMSR*TLSIPP Trigger: CGGAGGGATGCTGAGGGTTCACCTTGACATCCAAGT...GTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCAGCCCCTCAGAGCCATACTaGCGGGCCAGGATGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LQKVQEWRWEGLSHYWLSPSEPY*RARMTL Trigger: CAAGGTCATCCTGGCCCGGCAGTATGGCTCTGAGGG...GCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | GATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTGCCAAGCCCAGGGGTaGCTGGCTGGTACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DYCKRSRSGGGRACPTTGCQAQG*LAGTPP Trigger: GGGAGGAGTACCAGCCAGCCACCCCTGGGCTTGGCA...GCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGCCCTCAGAGCCATACTaGCGGGCCAGGATGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLRNGDTLTVPLSSRTSAPSEPY*RARMTL Trigger: CAAGGTCATCCTGGCCCGGCAGTATGGCTCTGAGGG...CGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCCTCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTACTGCTCCTTTTGGATCTaGTCCACTTGCTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SQPGCCPPPEPEERGHAYCSFWI*STCSTS Trigger: GCTGGTGGAGCAAGTGGAGCAGATCCAAAAGGAGCA...GTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTCCTCCTAAGCCCAGGGGTGGCTaGCTGGTACTCCTCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RLQSLSPPEHLRLKTSPPKPRGG*LVLLPL Trigger: CAGCGGGAGGAGTACCAGCCAGCCACCCCTGGGCTT...AGGAGGACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCAGCTGCTCACCAGGGGTGTaGGAGGTGAAGGTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: LQKVQEWRWEGLSHYWLSCSPGV*EVKVNL Trigger: CAGGTTCACCTTCACCTCCCACACCCCTGGTGAGCA...GCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | ATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTGCTCCTTTTGGATCTaGTCCACTTGCTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ISQPGCCPPPEPEERGHACSFWI*STCSTS Trigger: GCTGGTGGAGCAAGTGGAGCAGATCCAAAAGGAGCA...AGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | ATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCCAGGGGTGGCTGGCTaGTACTCCTCCCGCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ITAKGPGVEVGGLVPLLAPGVAG*YSSRCL Trigger: CAAACAGCGGGAGGAGTACCAGCCAGCCACCCCTGG...AGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | AACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACTTGAGGTGCCGCATCTaGCAGACGCCAATGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: NGDTLTVPLSSRTSAAENLRCRI*QTPMAT Trigger: CGTGGCCATTGGCGTCTGGCAGATGCGGCACCTCAA...GTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | GGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTTTGAGGTGCCGCATCTaGCAGACGCCAATGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: GTRLQSLSPPEHLRLKTSLRCRI*QTPMAT Trigger: CGTGGCCATTGGCGTCTGGCAGATGCGGCACCTCAA...ACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | AGCATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACTCTGTTTCTCCGATGTaGAAATACAGCGCGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SISQPGCCPPPEPEERGHSVSPM*KYSALP Trigger: CGGAAGCGCGCTGTATTTCCACATCGGAGAAACAGA...GTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109905.5 |
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| CDS-3UTR CCA 90 bp | AGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTACCGCTCAGCTTGTCCTTaGCAGCAATTTCTGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: SQPGCCPPPEPEERGHAYRSACP*QQFLHS Trigger: ACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCG...GTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCAGCCACCATAGCACTCGCTaGTTGGTGCTTTCGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LQKVQEWRWEGLSHYWLSHHSTR*LVLSLV Trigger: AACCAGCGAAAGCACCAACCAGCGAGTGCTATGGTG...GCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | GGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACTTGGATGTCAAGGTaGACCCTCAGCATCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GTGTRLQSLSPPEHLRLKTWMSR*TLSIPP Trigger: CGGAGGGATGCTGAGGGTTCACCTTGACATCCAAGT...TTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | AGACACCAAGGGCATCGCCAGCCCCTGAGTGATTACTGCAAAAGGTCCAGGAGTTGGATCTGCTCCACTTaGTCCACCAGCTGTCGCACC | + |
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Preference number: 4 (lower is better) Translates to: RHQGHRQPLSDYCKRSRSWICST*STSCRT Trigger: GGTGCGACAGCTGGTGGAGCAAGTGGAGCAGATCCA...ACTCCTGGACCTTTTGCAGTAATCACTCAGGGGCTGGCGATGCCCTTGGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | AGCATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACTTGGTGGAATTTGAGTaGAGACAGATCTGGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SISQPGCCPPPEPEERGHLVEFE*RQIWCS Trigger: TGAGCACCAGATCTGTCTTCACTCAAATTCCACCAA...GTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | GATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCCTGCAAGCTGAGGACTaGGGTCTCCAAAATGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DYCKRSRSGGGRACPTTGLQAED*GLQNGR Trigger: CCTTCCATTTTGGAGACCCCAGTCCTCAGCTTGCAG...GCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCAGCTTGGTGGAATTTGAGTaGAGACAGATCTGGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LQKVQEWRWEGLSHYWLSLVEFE*RQIWCS Trigger: TGAGCACCAGATCTGTCTTCACTCAAATTCCACCAA...GCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | TTTTGTGCACTGCAACCCCTCCACACCCTTAAACTGACACGCAGCAAACACACCTGCTCACCAGGGGTGTaGGAGGTGAAGGTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: FCALQPLHTLKLTRSKHTCSPGV*EVKVNL Trigger: CAGGTTCACCTTCACCTCCCACACCCCTGGTGAGCA...GGTGTGTTTGCTGCGTGTCAGTTTAAGGGTGTGGAGGGGTTGCAGTGCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTCCTCCTCACCATAGCACTCGCTaGTTGGTGCTTTCGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RLQSLSPPEHLRLKTSPPHHSTR*LVLSLV Trigger: AACCAGCGAAAGCACCAACCAGCGAGTGCTATGGTG...AGGAGGACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | CTCCACCTGAGCCTGAGGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGACTTGGCAGCAATTTCTaGATAGTCGTTTGCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: LHLSLRNGDTLTVPLSSRLGSNF*IVVCMF Trigger: GAACATGCAAACGACTATGCAGAAATTGCTGCCAAG...TCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CTCCACCTGAGCCTGAGGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAAGAGGGAGAACTTGGTaGAATTTGAGTGAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LHLSLRNGDTLTVPLSSRRGRTW*NLSEDR Trigger: TCTGTCTTCACTCAAATTCCACCAAGTTCTCCCTCT...TCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | CGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTCCTCCTATAGCACTCGCTGGTTaGTGCTTTCGCTGGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RLQSLSPPEHLRLKTSPPIALAG*CFRWFV Trigger: GACAAACCAGCGAAAGCACCAACCAGCGAGTGCTAT...AGGAGGACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | ATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTATAGCACTCGCTGGTTaGTGCTTTCGCTGGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: ITAKGPGVEVGGLVPLLAIALAG*CFRWFV Trigger: GACAAACCAGCGAAAGCACCAACCAGCGAGTGCTAT...AGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | GGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTTTTCCTGATTGGGGCTaGTTTCTGCAAGCTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GTRLQSLSPPEHLRLKTSFPDWG*FLQAED Trigger: GTCCTCAGCTTGCAGAAACCAGCCCCAATCAGGAAA...ACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTGCACTGCAACCCCTCCACACCCTTAAACTGACACGCAGCAAACACACCCGTCCGGTAATTTCCTaGTTGGGGCTGGTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FCALQPLHTLKLTRSKHTRPVIS*LGLVSA Trigger: TGCAGAAACCAGCCCCAATCAGGAAATTACCGGACG...GGTGTGTTTGCTGCGTGTCAGTTTAAGGGTGTGGAGGGGTTGCAGTGCACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | GGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTCGCTCAGCTTGTCCTTaGCAGCAATTTCTGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: GTRLQSLSPPEHLRLKTSRSACP*QQFLHS Trigger: ACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCG...ACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR GCA 90 bp | GGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACCAGTCTTGGCAGCAATTTCTaGATAGTCGTTTGCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: GTRLQSLSPPEHLRLKTSLGSNF*IVVCMF Trigger: GAACATGCAAACGACTATGCAGAAATTGCTGCCAAG...ACTGGTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CCA 90 bp | AACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACAGAGGGAGAACTTGGTaGAATTTGAGTGAAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: NGDTLTVPLSSRTSAAENRGRTW*NLSEDR Trigger: TCTGTCTTCACTCAAATTCCACCAAGTTCTCCCTCT...GTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGCAAAGTTTCTGGAATAGCAAGGAGTCACTGATACACCCTGACCTGCTCGAACTTGGTGGAATTTaGGTGAAGACAGATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EKQSFWNSKESLIHPDLLELGGI*VKTDLV Trigger: CACCAGATCTGTCTTCACTCAAATTCCACCAAGTTC...GAGCAGGTCAGGGTGTATCAGTGACTCCTTGCTATTCCAGAAACTTTGCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| 3UTR CAA 72 bp | CTCTGTTTCCAACCAGCACCAAAGTCTCTGCTTGGTTaGATACCAGTTGTTCAAGCCCCAGAAAGGACAATT | + |
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Preference number: 4 (lower is better) Translates to: LCFQPAPKSLLG*IPVVQAPERTI Trigger: AATTGTCCTTTCTGGGGCTTGAACAACTGGTATCAAACCAAGCAGAGACTTTGGTGCTGGTTGGAAACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTACAGTCCCTCTCTCTACTCCTCCCGCTGTTaGTCATACAGCTGCGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: CCPPPEPEERGHAYSPSLYSSRC*SYSCVR Trigger: CCGGACGCAGCTGTATGACAAACAGCGGGAGGAGTA...GAGAGAGGGACTGTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | ATTAGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTGGTGCTTTCGCTGGTTaGTCTGAAGCGCTCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: ISQPGCCPPPEPEERGHAGAFAG*SEALFS Trigger: CGAGAAGAGCGCTTCAGACAAACCAGCGAAAGCACC...AGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGCCAGGCTGCTGTCCTCCACCTGAGCCTGAGGAACGGGGACACGCTTACGTAGTTCTGCTCCTTTaGGATCTGCTCCACTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQPGCCPPPEPEERGHAYVVLLL*DLLHLL Trigger: GAGCAAGTGGAGCAGATCCAAAAGGAGCAGAACTAC...GTAAGCGTGTCCCCGTTCCTCAGGCTCAGGTGGAGGACAGCAGCCTGGCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | GATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTTGGATCTGCTCCACTaGCTCCACCAGCTGTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: DYCKRSRSGGGRACPTTGLDLLH*LHQLSH Trigger: GTGCGACAGCTGGTGGAGCAAGTGGAGCAGATCCAA...GCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | ATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTTACTCCTCCCGCTGTTaGTCATACAGCTGCGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: ITAKGPGVEVGGLVPLLAYSSRC*SYSCVR Trigger: CCGGACGCAGCTGTATGACAAACAGCGGGAGGAGTA...AGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CCA 90 bp | CAAGGTGAACCCTCAGCATCCCTCCGGCAAAGAGGGAGAACTTGGTaGAATTTGAGTGAAGACAGATCTGGTGCTCACCAGGGGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: QGEPSASLRQRGRTW*NLSEDRSGAHQGCG Trigger: CCCACACCCCTGGTGAGCACCAGATCTGTCTTCACTCAAATTCCACCAAGTTCTCCCTCTTTGCCGGAGGGATGCTGAGGGTTCACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | CTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTCAGCTTTCTGCATAGTCGTTaGCATGTTCGCCCACTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LQKVQEWRWEGLSHYWLSFLHSR*HVRPLG Trigger: TCCAAGTGGGCGAACATGCAAACGACTATGCAGAAA...GCTGAGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | AACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAACGGTGCTTTCGCTGGTTaGTCTGAAGCGCTCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: NGDTLTVPLSSRTSAAENGAFAG*SEALFS Trigger: CGAGAAGAGCGCTTCAGACAAACCAGCGAAAGCACC...GTTTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | AGACACCAAGGGCATCGCCAGCCCCTGAGTGATTACTGCAAAAGGTCCAGGAGTTGCATGTTCGCCCACTaGGATGTCAAGGTGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: RHQGHRQPLSDYCKRSRSCMFAH*DVKVNP Trigger: AGGGTTCACCTTGACATCCAAGTGGGCGAACATGCA...ACTCCTGGACCTTTTGCAGTAATCACTCAGGGGCTGGCGATGCCCTTGGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | GGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAGTAGTTCTGCTCCTTTaGGATCTGCTCCACTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: GTGTRLQSLSPPEHLRLKVVLLL*DLLHLL Trigger: GAGCAAGTGGAGCAGATCCAAAAGGAGCAGAACTAC...TTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS GCA 90 bp | CAGCTCGCTCAGCTTGTCCTTGGCAGCAATTTCTGCATAGTCGTTTaGATGTTCGCCCACTTGGATGTCAAGGTGAACCCTCAGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: QLAQLVLGSNFCIVV*MFAHLDVKVNPQHP Trigger: GGGATGCTGAGGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS GCA 90 bp | CACCCTCAGCTGCAGCTCGCTCAGCTTGTCCTTGGCAGCAATTTCTaGATAGTCGTTTGCATGTTCGCCCACTTGGATGTCAAGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: HPQLQLAQLVLGSNF*IVVCMFAHLDVKVN Trigger: GTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCGAGCTGCAGCTGAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CCA 90 bp | TCCGGAATCTCCTCAATGAAGCACTTCTTTTCTGTTTCTCCGATGTaGAAATACAGCGCGCTTCCGCGGGCTGCAAGCCACAGCAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: SGISSMKHFFSVSPM*KYSALPRAASHSSS Trigger: GCTACTGCTGTGGCTTGCAGCCCGCGGAAGCGCGCTGTATTTCCACATCGGAGAAACAGAAAAGAAGTGCTTCATTGAGGAGATTCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109905.5 |
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| CDS-3UTR CAA 90 bp | GGAACGGGGACACGCTTACAGTCCCTCTCTCCTCCAGAACATCTGCGGCTGAAAAGAACTTGGTGGAATTaGAGTGAAGACAGATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GTGTRLQSLSPPEHLRLKRTWWN*SEDRSG Trigger: ACCAGATCTGTCTTCACTCAAATTCCACCAAGTTCT...TTTCAGCCGCAGATGTTCTGGAGGAGAGAGGGACTGTAAGCGTGTCCCCGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS-3UTR CAA 90 bp | ATTACTGCAAAAGGTCCAGGAGTGGAGGTGGGAGGGCTTGTCCCACTACTGGCTAGAACTTGGTGGAATTaGAGTGAAGACAGATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: ITAKGPGVEVGGLVPLLARTWWN*SEDRSG Trigger: ACCAGATCTGTCTTCACTCAAATTCCACCAAGTTCT...AGCCAGTAGTGGGACAAGCCCTCCCACCTCCACTCCTGGACCTTTTGCAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CCA 72 bp | ACCTCTACGAACATGCCAAGCCCAGGGGTGGCTGGCTaGTACTCCTCCCGCTGTTTGTCATACAGCTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: TSTNMPSPGVAG*YSSRCLSYSCV Trigger: GACGCAGCTGTATGACAAACAGCGGGAGGAGTACCAGCCAGCCACCCCTGGGCTTGGCATGTTCGTAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 72 bp | GCGCTCTTCTCGCCACCGCTGGTAGTTCTGCTCCTTTaGGATCTGCTCCACTTGCTCCACCAGCTGTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALFSPPLVVLLL*DLLHLLHQLSH Trigger: GTGCGACAGCTGGTGGAGCAAGTGGAGCAGATCCAAAAGGAGCAGAACTACCAGCGGTGGCGAGAAGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 90 bp | TTGTCTGAAGCGCTCTTCTCGCCACCGCTGGTAGTTCTGCTCCTTTaGGATCTGCTCCACTTGCTCCACCAGCTGTCGCACCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSEALFSPPLVVLLL*DLLHLLHQLSHPQL Trigger: CAGCTGAGGGTGCGACAGCTGGTGGAGCAAGTGGAGCAGATCCAAAAGGAGCAGAACTACCAGCGGTGGCGAGAAGAGCGCTTCAGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS GCA 72 bp | TGCTCCACTTGCTCCACCAGCTGTCGCACCCTCAGCTaGAGCTCGCTCAGCTTGTCCTTGGCAGCAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: CSTCSTSCRTLS*SSLSLSLAAIS Trigger: AGAAATTGCTGCCAAGGACAAGCTGAGCGAGCTGCAGCTGAGGGTGCGACAGCTGGTGGAGCAAGTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 72 bp | CTGCCCTCAGAGCCATACTGCCGGGCCAGGATGACCTaGTCCTCGGGGTCTTTTACCTCTACGAACATGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPSEPYCRARMT*SSGSFTSTNMP Trigger: TGGCATGTTCGTAGAGGTAAAAGACCCCGAGGACAAGGTCATCCTGGCCCGGCAGTATGGCTCTGAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CCA 72 bp | GGTCTTTTACCTCTACGAACATGCCAAGCCCAGGGGTaGCTGGCTGGTACTCCTCCCGCTGTTTGTCATACA | + |
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Preference number: 6 (lower is better) Translates to: GLLPLRTCQAQG*LAGTPPAVCHT Trigger: TGTATGACAAACAGCGGGAGGAGTACCAGCCAGCCACCCCTGGGCTTGGCATGTTCGTAGAGGTAAAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CCA 72 bp | CCCTCAGCATCCCTCCGGCAAAGAGGGAGAACTTGGTaGAATTTGAGTGAAGACAGATCTGGTGCTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: PSASLRQRGRTW*NLSEDRSGAHQ Trigger: CTGGTGAGCACCAGATCTGTCTTCACTCAAATTCCACCAAGTTCTCCCTCTTTGCCGGAGGGATGCTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 72 bp | GCATCCCTCCGGCAAAGAGGGAGAACTTGGTGGAATTaGAGTGAAGACAGATCTGGTGCTCACCAGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ASLRQRGRTWWN*SEDRSGAHQGC Trigger: ACACCCCTGGTGAGCACCAGATCTGTCTTCACTCAAATTCCACCAAGTTCTCCCTCTTTGCCGGAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 90 bp | GTCCTTGGCAGCAATTTCTGCATAGTCGTTTGCATGTTCGCCCACTaGGATGTCAAGGTGAACCCTCAGCATCCCTCCGGCAAAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VLGSNFCIVVCMFAH*DVKVNPQHPSGKEG Trigger: TCCCTCTTTGCCGGAGGGATGCTGAGGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 90 bp | GCAGCTCGCTCAGCTTGTCCTTGGCAGCAATTTCTGCATAGTCGTTaGCATGTTCGCCCACTTGGATGTCAAGGTGAACCCTCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: AARSACPWQQFLHSR*HVRPLGCQGEPSAS Trigger: GGATGCTGAGGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS GCA 72 bp | CTGCAGCTCGCTCAGCTTGTCCTTGGCAGCAATTTCTaGATAGTCGTTTGCATGTTCGCCCACTTGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LQLAQLVLGSNF*IVVCMFAHLDV Trigger: GACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCGAGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 72 bp | AGCAATTTCTGCATAGTCGTTTGCATGTTCGCCCACTaGGATGTCAAGGTGAACCCTCAGCATCCCTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SNFCIVVCMFAH*DVKVNPQHPSG Trigger: GCCGGAGGGATGCTGAGGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS GCA 72 bp | CAGCTTGTCCTTGGCAGCAATTTCTGCATAGTCGTTTaGATGTTCGCCCACTTGGATGTCAAGGTGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: QLVLGSNFCIVV*MFAHLDVKVNP Trigger: AGGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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| CDS CAA 72 bp | TCAGCTTGTCCTTGGCAGCAATTTCTGCATAGTCGTTaGCATGTTCGCCCACTTGGATGTCAAGGTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: SACPWQQFLHSR*HVRPLGCQGEP Trigger: GGGTTCACCTTGACATCCAAGTGGGCGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109905.5 ENSMUST00000224741.2 |
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