RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMED8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034111

Ensembl transcript IDs: ENSMUST00000037418.7

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGGAGCATTCTGGGCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTaGTCCCAGGCTGAGAGCAGGTCAGGGGTCCACAACAAACAGGAG +
Preference number: 1 (lower is better)
Translates to: DGAFWALSAGQAQGP*SQAESRSGVHNKQE
Trigger: CTCCTGTTTGTTGTGGACCCCTGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGCCCAGAATGCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp CTGGGCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTGCTCCCAGGCTaGGAGCAGGTCAGGGGTCCACAACAAACAGGAGAAGTATGGAGA +
Preference number: 1 (lower is better)
Translates to: LGAECRASPGALLPG*EQVRGPQQTGEVWR
Trigger: TCTCCATACTTCTCCTGTTTGTTGTGGACCCCTGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp GGCAGGGCACAAGGCTTCAAAGCCCCACACAGAACTTCAGGCTCTTaGTTACACACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: GRAQGFKAPHRTSGS*LHTRGTSWQPASAS
Trigger: GCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGTTCTGTGTGGGGCTTTGAAGCCTTGTGCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp CAACACAGACTGGGAAACAGAGGTATGGATGGCTGCAGAGACCCATaGCACTGTGTGCCCACTCCACCAGAGGCCTTAGCACCTGCCGCT +
Preference number: 1 (lower is better)
Translates to: QHRLGNRGMDGCRDP*HCVPTPPEALAPAA
Trigger: AGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGCACACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAGTCTGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp CACTGTGTGCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTaGCCACCCACTACAATACATTCTGCCGCTCCAGAACCTCAGAAG +
Preference number: 1 (lower is better)
Translates to: HCVPTPPEALAPAAL*PPTTIHSAAPEPQK
Trigger: CTTCTGAGGTTCTGGAGCGGCAGAATGTATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGCACACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp CCTACAAAGCACATCTGCAATGACGAGAGAACGGCGGTGTGGTGCTaGCTGGTCACTGAGAGGCTATGGCGGGCCATACAGCCCACACTT +
Preference number: 1 (lower is better)
Translates to: PTKHICNDERTAVWC*LVTERLWRAIQPTL
Trigger: AAGTGTGGGCTGTATGGCCCGCCATAGCCTCTCAGTGACCAGTCAGCACCACACCGCCGTTCTCTCGTCATTGCAGATGTGCTTTGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp CAAAGCACATCTGCAATGACGAGAGAACGGCGGTGTGGTGCTGACTaGTCACTGAGAGGCTATGGCGGGCCATACAGCCCACACTTTGCT +
Preference number: 1 (lower is better)
Translates to: QSTSAMTRERRCGAD*SLRGYGGPYSPHFA
Trigger: AGCAAAGTGTGGGCTGTATGGCCCGCCATAGCCTCTCAGTGACCAGTCAGCACCACACCGCCGTTCTCTCGTCATTGCAGATGTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp AGGGGCCTTCTGAGAGGGTTTTTGCTGGAGTCGGAAACAAGAGTGTaGGTCAGGGACCACAGAACAGGAGCACTACACCACCACCTGCAG +
Preference number: 1 (lower is better)
Translates to: RGLLRGFLLESETRV*VRDHRTGALHHHLQ
Trigger: CTGCAGGTGGTGGTGTAGTGCTCCTGTTCTGTGGTCCCTGACTCACACTCTTGTTTCCGACTCCAGCAAAAACCCTCTCAGAAGGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp CAACTCTCCTGCTGTGCACTACAAGAAAACAAGCCTAAGGAAAGATaGAGCATTCTGGGCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: QLSCCALQENKPKER*SILGAECRASPGAL
Trigger: CAAGGCCCCTGGGCTTGCCCTGCACTCAGCGCCCAGAATGCTCCATCTTTCCTTAGGCTTGTTTTCTTGTAGTGCACAGCAGGAGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp TCCAGAACCTCAGAAGGAACCGGCTGTGAGAGGCTGTCTGTCGCCTaGAGGCTTTGGTCAAGTAAGATGCACACACAGTCAGCAGCAACA +
Preference number: 1 (lower is better)
Translates to: SRTSEGTGCERLSVA*RLWSSKMHTQSAAT
Trigger: TGTTGCTGCTGACTGTGTGTGCATCTTACTTGACCAAAGCCTGCAGGCGACAGACAGCCTCTCACAGCCGGTTCCTTCTGAGGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp AAGAATGACAGACAACACAGACTGGGAAACAGAGGTATGGATGGCTaGAGAGACCCATGCCACTGTGTGCCCACTCCACCAGAGGCCTTA +
Preference number: 1 (lower is better)
Translates to: KNDRQHRLGNRGMDG*RDPCHCVPTPPEAL
Trigger: TAAGGCCTCTGGTGGAGTGGGCACACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAGTCTGTGTTGTCTGTCATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp TGCCTGGGTTCTGATCCTCATTTTCTACTCCCCAAAGAAGGAGTGTaGAGCTCCCTGACCTCAGGCACACAATGGGCACAAGGACTTGCT +
Preference number: 1 (lower is better)
Translates to: CLGSDPHFLLPKEGV*SSLTSGTQWAQGLA
Trigger: AGCAAGTCCTTGTGCCCATTGTGTGCCTGAGGTCAGGGAGCTGCACACTCCTTCTTTGGGGAGTAGAAAATGAGGATCAGAACCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp TCAGAAGGAACCGGCTGTGAGAGGCTGTCTGTCGCCTGCAGGCTTTaGTCAAGTAAGATGCACACACAGTCAGCAGCAACAGCAAAATCC +
Preference number: 1 (lower is better)
Translates to: SEGTGCERLSVACRL*SSKMHTQSAATAKS
Trigger: GGATTTTGCTGTTGCTGCTGACTGTGTGTGCATCTTACTTGACCAAAGCCTGCAGGCGACAGACAGCCTCTCACAGCCGGTTCCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp GCACCACAAGTGGAACTGACTGACTCTCTCTTCAGCCCCAAAGGATaGAGACAGGAAACCAATCCTCCGGTCAGGGTTACCTGTAGCAGA +
Preference number: 1 (lower is better)
Translates to: APQVELTDSLFSPKG*RQETNPPVRVTCSR
Trigger: TCTGCTACAGGTAACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAGTCAGTCAGTTCCACTTGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp GGACACATTCACAACTGTAGCGTCTGCACCACAAGTGGAACTGACTaGCTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCC +
Preference number: 1 (lower is better)
Translates to: GHIHNCSVCTTSGTD*LSLQPQRMETGNQS
Trigger: GGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAGTCAGTCAGTTCCACTTGTGGTGCAGACGCTACAGTTGTGAATGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp CCTGCTCTTTGGGTGATCACTTCTGTAGGACAGAGAGGCCTGGTGTaGGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATG +
Preference number: 1 (lower is better)
Translates to: PALWVITSVGQRGLV*GNHMIKEGANGNIM
Trigger: CATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCACACCAGGCCTCTCTGTCCTACAGAAGTGATCACCCAAAGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp AGGACAGAGAGGCCTGGTGTGAGGCAACCACATGATAAAGGAAGGTaGCAACGGAAACATTATGAAGAGGGTGTCAGAGGAGGAAAAGGA +
Preference number: 1 (lower is better)
Translates to: RTERPGVRQPHDKGR*QRKHYEEGVRGGKG
Trigger: TCCTTTTCCTCCTCTGACACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCACACCAGGCCTCTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp AGTGTGCAGCTCCCTGACCTCAGGCACACAATGGGCACAAGGACTTaGTTTTTACAGAACCCACACCCTTTAACCAACTACCCGTATAAC +
Preference number: 1 (lower is better)
Translates to: SVQLPDLRHTMGTRT*FLQNPHPLTNYPYN
Trigger: GTTATACGGGTAGTTGGTTAAAGGGTGTGGGTTCTGTAAAAAGCAAGTCCTTGTGCCCATTGTGTGCCTGAGGTCAGGGAGCTGCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp GTACCCTCAGTCAGTAAAAGCATGATTCAACTTCAGCTCAGCATCTaGGTCCAAGGTGAGCAGCAAGGCTCTTCACTGCCCACAGTTTAC +
Preference number: 1 (lower is better)
Translates to: VPSVSKSMIQLQLSI*VQGEQQGSSLPTVY
Trigger: GTAAACTGTGGGCAGTGAAGAGCCTTGCTGCTCACCTTGGACTCAGATGCTGAGCTGAAGTTGAATCATGCTTTTACTGACTGAGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp GTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTaGGAGTCACCCAAAATGCTACCAGGACTAAAGAGTGCTTGCTCG +
Preference number: 1 (lower is better)
Translates to: VSDQHQIHRDPEVLA*ESPKMLPGLKSACS
Trigger: CGAGCAAGCACTCTTTAGTCCTGGTAGCATTTTGGGTGACTCTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp AGAGAAAACGCTGTGTGGTGTGCTCTGTGTGGTTTAACATGTCAATaGTGTCAGGCTATCGAGGCCTGCTTGTTACCTAAGCACTCACGT +
Preference number: 1 (lower is better)
Translates to: RENAVWCALCGLTCQ*CQAIEACLLPKHSR
Trigger: ACGTGAGTGCTTAGGTAACAAGCAGGCCTCGATAGCCTGACAGCATTGACATGTTAAACCACACAGAGCACACCACACAGCGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp GCCTTCTTGGTTCAAGGGGGCAACATTACATCTCAGCAGGAACAGTaGCTGCAAATTTGGCCACAAAGTGCTTACAGTGTTTCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: AFLVQGGNITSQQEQ*LQIWPQSAYSVSLH
Trigger: GTGCAGAGAAACACTGTAAGCACTTTGTGGCCAAATTTGCAGTCACTGTTCCTGCTGAGATGTAATGTTGCCCCCTTGAACCAAGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp GGCCGACGCTTTTCTTCTCTTAGGACACTGACCACAGCTTGCAACTaGTTGGAAGTTCTTGCTATGTGGCAGAAACACAGACTTGGTAAA +
Preference number: 1 (lower is better)
Translates to: GRRFSSLRTLTTACN*LEVLAMWQKHRLGK
Trigger: TTTACCAAGTCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAGAAAAGCGTCGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp GAGAAGACCTACCCAAAAATGCATCTAGCTGATCCTGCTAACAGATaGCACAAAGGGCTGGAGAGTTCTCCACTGAGCACAAGAAGAACA +
Preference number: 1 (lower is better)
Translates to: EKTYPKMHLADPANR*HKGLESSPLSTRRT
Trigger: TGTTCTTCTTGTGCTCAGTGGAGAACTCTCCAGCCCTTTGTGCCATCTGTTAGCAGGATCAGCTAGATGCATTTTTGGGTAGGTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp ATAAAAGAGGTGGCCTTCGTGGCTCAGAGCAGATGGGAAGCCTTATaGGAAACAGATGGGAGCTGTTTCAAAGGCAATCTGAAATGTGCT +
Preference number: 1 (lower is better)
Translates to: IKEVAFVAQSRWEAL*ETDGSCFKGNLKCA
Trigger: AGCACATTTCAGATTGCCTTTGAAACAGCTCCCATCTGTTTCTCATAAGGCTTCCCATCTGCTCTGAGCCACGAAGGCCACCTCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp GAGAAAGCATTCTCCATCCAAAAGATTGGGCTCTTTCATACAGTGTaGTTTCCCTCTTCTGGCACCTCAAAATGTAAAGAAGGCAGGCGC +
Preference number: 1 (lower is better)
Translates to: EKAFSIQKIGLFHTV*FPSSGTSKCKEGRR
Trigger: GCGCCTGCCTTCTTTACATTTTGAGGTGCCAGAAGAGGGAAAGCACACTGTATGAAAGAGCCCAATCTTTTGGATGGAGAATGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp ATAAGAGGCCGACGCTTTTCTTCTCTTAGGACACTGACCACAGCTTaGAACTGCTTGGAAGTTCTTGCTATGTGGCAGAAACACAGACTT +
Preference number: 1 (lower is better)
Translates to: IRGRRFSSLRTLTTA*NCLEVLAMWQKHRL
Trigger: AAGTCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAGAAAAGCGTCGGCCTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp TGTCAGGCTATCGAGGCCTGCTTGTTACCTAAGCACTCACGTGACTaGAGGGTTTGTGCTGTTAGACAAATGCATCTTAACTATGCCTTT +
Preference number: 1 (lower is better)
Translates to: CQAIEACLLPKHSRD*RVCAVRQMHLNYAF
Trigger: AAAGGCATAGTTAAGATGCATTTGTCTAACAGCACAAACCCTGCAGTCACGTGAGTGCTTAGGTAACAAGCAGGCCTCGATAGCCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp TCTTGGTTCAAGGGGGCAACATTACATCTCAGCAGGAACAGTGACTaGAAATTTGGCCACAAAGTGCTTACAGTGTTTCTCTGCACACTG +
Preference number: 1 (lower is better)
Translates to: SWFKGATLHLSRNSD*KFGHKVLTVFLCTL
Trigger: CAGTGTGCAGAGAAACACTGTAAGCACTTTGTGGCCAAATTTGCAGTCACTGTTCCTGCTGAGATGTAATGTTGCCCCCTTGAACCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp AGTGGTGAGAGGCTGGATAGAGAAAGCATTCTCCATCCAAAAGATTaGGCTCTTTCATACAGTGTGCTTTCCCTCTTCTGGCACCTCAAA +
Preference number: 1 (lower is better)
Translates to: SGERLDRESILHPKD*ALSYSVLSLFWHLK
Trigger: TTTGAGGTGCCAGAAGAGGGAAAGCACACTGTATGAAAGAGCCCAATCTTTTGGATGGAGAATGCTTTCTCTATCCAGCCTCTCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp CATTACATCTCAGCAGGAACAGTGACTGCAAATTTGGCCACAAAGTaGTTACAGTGTTTCTCTGCACACTGGATCACAAGTCCCTCTAAT +
Preference number: 1 (lower is better)
Translates to: HYISAGTVTANLATK*LQCFSAHWITSPSN
Trigger: ATTAGAGGGACTTGTGATCCAGTGTGCAGAGAAACACTGTAAGCACTTTGTGGCCAAATTTGCAGTCACTGTTCCTGCTGAGATGTAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp GAGTCCTCCATCTCTGAAAGGCCAGACTTCCCAAGCATCGCAGGATaGCATGTTAGAATAAACACACATGATCATTTTCTAAGCCCTAAA +
Preference number: 1 (lower is better)
Translates to: ESSISERPDFPSIAG*HVRINTHDHFLSPK
Trigger: TTTAGGGCTTAGAAAATGATCATGTGTGTTTATTCTAACATGTCATCCTGCGATGCTTGGGAAGTCTGGCCTTTCAGAGATGGAGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp CCTACAACTTCACAGCCAGGGTGTACTATCTTTGCACTTAGTTCATaGGGAATGACGATTTGTAAAGGAGCCAGTCTATCAATCGATACC +
Preference number: 1 (lower is better)
Translates to: PTTSQPGCTIFALSS*GMTICKGASLSIDT
Trigger: GGTATCGATTGATAGACTGGCTCCTTTACAAATCGTCATTCCTCATGAACTAAGTGCAAAGATAGTACACCCTGGCTGTGAAGTTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp AAACCTAATTATTCAAAATTCAGAAGAATGACAGACAACACAGACTaGGAAACAGAGGTATGGATGGCTGCAGAGACCCATGCCACTGTG +
Preference number: 1 (lower is better)
Translates to: KPNYSKFRRMTDNTD*ETEVWMAAETHATV
Trigger: CACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAGTCTGTGTTGTCTGTCATTCTTCTGAATTTTGAATAATTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 90 bp CTGGCTTACAAAACAGTTCCAATGAACAAAGTAGCACTAATGCAGTaGATGAATTCCAGGACATACGTGATGGTTTGTTCACTTTTCCAG +
Preference number: 1 (lower is better)
Translates to: LAYKTVPMNKVALMQ*MNSRTYVMVCSLFQ
Trigger: CTGGAAAAGTGAACAAACCATCACGTATGTCCTGGAATTCATTCACTGCATTAGTGCTACTTTGTTCATTGGAACTGTTTTGTAAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 90 bp GAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCCCTTCTTTAACTaGATAGTATTTACTTGTGCTCTAGAGAGCAGGGCAAGGATAAAA +
Preference number: 1 (lower is better)
Translates to: EENPNLCSLRNPFFN*IVFTCALESRARIK
Trigger: TTTTATCCTTGCCCTGCTCTCTAGAGCACAAGTAAATACTATGCAGTTAAAGAAGGGATTTCTAAGAGAGCAGAGATTAGGATTCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 90 bp AGAGTGGTCTTTAAACATAAATATACAATCACAGACTTTAGGGTTTaGATTTTGCCCATTCCTCATAAAGAAGGAACTGAGTACAGCTCG +
Preference number: 1 (lower is better)
Translates to: RVVFKHKYTITDFRV*ILPIPHKEGTEYSS
Trigger: CGAGCTGTACTCAGTTCCTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATTTATGTTTAAAGACCACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTGCTCCCAGGCTGAGAGCAGGTCAACGGCGGTGTGGTGCTaGCTGGTCACTGAGAGGCTA +
Preference number: 2 (lower is better)
Translates to: ALSAGQAQGPCSQAESRSTAVWC*LVTERL
Trigger: TAGCCTCTCAGTGACCAGTCAGCACCACACCGCCGT...TGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 90 bp AGGCAGGGCACAAGGCTTCAAAGCCCCACACAGAACTTCAGGCTCTaGCTTACACACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RQGTRLQSPTQNFRL*LTHKRHQLAACFSQ
Trigger: CTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGTTCTGTGTGGGGCTTTGAAGCCTTGTGCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACTACAATCTTCTCTTAGGACACTaGCCACAGCTTGCAACTGCT +
Preference number: 2 (lower is better)
Translates to: AHSTRGLSTCRSVATHYNLLLGH*PQLATA
Trigger: AGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAG...ATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTGCTCCCAGGCTGAGAGCAGGTCACCAAGCATCGCAGGATaGCATGTTAGAATAAACACA +
Preference number: 2 (lower is better)
Translates to: ALSAGQAQGPCSQAESRSPSIAG*HVRINT
Trigger: TGTGTTTATTCTAACATGTCATCCTGCGATGCTTGG...TGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGGTGCTGACTGGTCACTaGGAGGCTATGGCGGGCCAT +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGVLTGH*EAMAGH
Trigger: ATGGCCCGCCATAGCCTCTCAGTGACCAGTCAGCAC...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGCGGTGTGGTGCTGACTaGTCACTGAGAGGCTATGGC +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGRCGAD*SLRGYG
Trigger: GCCATAGCCTCTCAGTGACCAGTCAGCACCACACCG...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTAACCCACCCACCCTGTaGGGAAAAGGTCAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGNPPTL*GKGQQA
Trigger: TGCTTGCTGACCTTTTCCTCACAGGGTGGGTGGGTT...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTAAGAGGTGGCCTTCGTaGCTCAGAGCAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGKRWPS*LRADGK
Trigger: CTTCCCATCTGCTCTGAGCCACGAAGGCCACCTCTT...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGCATCTGAGTCCAAGGTaGGCAGCAAGGCTCTTCACT +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGHLSPR*AARLFT
Trigger: AGTGAAGAGCCTTGCTGCTCACCTTGGACTCAGATG...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTCTTCAGCTCAGCATCTaGGTCCAAGGTGAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGLQLSI*VQGEQQ
Trigger: TTGCTGCTCACCTTGGACTCAGATGCTGAGCTGAAG...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp AGTGAGGTCTCCCAGCCTGAGCTAGAGACTAAGAAGACCCAGCAGGCAGGCAGGCTCTTTCATACAGTGTaGTTTCCCTCTTCTGGCACC +
Preference number: 2 (lower is better)
Translates to: SEVSQPELETKKTQQAGRLFHTV*FPSSGT
Trigger: GGTGCCAGAAGAGGGAAAGCACACTGTATGAAAGAG...CCTGCCTGCCTGCTGGGTCTTCTTAGTCTCTAGCTCAGGCTGGGAGACCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTAGAGGTATGGATGGCTaGAGAGACCCATGCCACTGT +
Preference number: 2 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGRGMDG*RDPCHC
Trigger: ACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCT...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp CAGGTTGACAGCTACAGGGTGCGTCCTTTGTTCCTGACCACACCTACTGGCAAGTGGCATCACAGGCTCTaGAGAAGAGTGAGCGGTAAC +
Preference number: 2 (lower is better)
Translates to: QVDSYRVRPLFLTTPTGKWHHRL*RRVSGN
Trigger: GTTACCGCTCACTCTTCTCCAGAGCCTGTGATGCCA...CTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGAAAGATGGAGCATTCTaGGCGCTGAGTGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGKDGAF*ALSAGQ
Trigger: TTGCCCTGCACTCAGCGCCCAGAATGCTCCATCTTT...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGGGGCACAGAGACTTTTaGCAGTACCCCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGGHRDF*QYPYKA
Trigger: TGCTTTGTAGGGGTACTGGCAAAAGTCTCTGTGCCC...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp CAGGTTGACAGCTACAGGGTGCGTCCTTTGTTCCTGACCACACCTACTGGCAAGGCAGTGGTGAGAGGCTaGATAGAGAAAGCATTCTCC +
Preference number: 2 (lower is better)
Translates to: QVDSYRVRPLFLTTPTGKAVVRG*IEKAFS
Trigger: GGAGAATGCTTTCTCTATCCAGCCTCTCACCACTGC...CTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp CAGGTTGACAGCTACAGGGTGCGTCCTTTGTTCCTGACCACACCTACTGGCAAGGTCGCCTGCAGGCTTTaGTCAAGTAAGATGCACACA +
Preference number: 2 (lower is better)
Translates to: QVDSYRVRPLFLTTPTGKVACRL*SSKMHT
Trigger: TGTGTGCATCTTACTTGACCAAAGCCTGCAGGCGAC...CTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGTGGGAAACAGAGGTATaGATGGCTGCAGAGACCCAT +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGWETEV*MAAETH
Trigger: ATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCA...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTCTACTGGCAAGATCCTaGTCTTTGGGTGATCACTTC +
Preference number: 2 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGLLARS*SLGDHF
Trigger: GAAGTGATCACCCAAAGAGCAGGATCTTGCCAGTAG...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp CAGGTTGACAGCTACAGGGTGCGTCCTTTGTTCCTGACCACACCTACTGGCAAGCAAAATTCAGAAGAATaGCAGACAACACAGACTGGG +
Preference number: 2 (lower is better)
Translates to: QVDSYRVRPLFLTTPTGKQNSEE*QTTQTG
Trigger: CCCAGTCTGTGTTGTCTGTCATTCTTCTGAATTTTG...CTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp AAGAACTCAGCCACTCTTAGGAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCAGAGGCCTTAGCACCTaGCGCTCTGTGGCCACCCAC +
Preference number: 2 (lower is better)
Translates to: KNSATLRKRILISALLEIRGLST*RSVATH
Trigger: GTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCT...GATTTCTAAGAGAGCAGAGATTAGGATTCTCTTCCTAAGAGTGGCTGAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp GACAGGAAACCAATCCTCCGGTCAGGGTTACCTGTAGCAGAGAAGACCTACCCATCAACTCTCCTGCTGTaGACTACAAGAAAACAAGCC +
Preference number: 2 (lower is better)
Translates to: DRKPILRSGLPVAEKTYPSTLLL*TTRKQA
Trigger: GGCTTGTTTTCTTGTAGTGCACAGCAGGAGAGTTGA...TGGGTAGGTCTTCTCTGCTACAGGTAACCCTGACCGGAGGATTGGTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGTCTGAGATAACTCAGTaGTTACCTTCCACCCTTTCT +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGSEITQ*LPSTLS
Trigger: AGAAAGGGTGGAAGGTAACCACTGAGTTATCTCAGA...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGCACACCTTAGAACCATaGACTCTGACATTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGHTLEP*TLTLKA
Trigger: TGCCTTTAATGTCAGAGTCCATGGTTCTAAGGTGTG...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AAGAACTCAGCCACTCTTAGGAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCACAAGAGGCACCAGCTaGCAGCCTGCTTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: KNSATLRKRILISALLEITRGTS*QPASAS
Trigger: GCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGT...GATTTCTAAGAGAGCAGAGATTAGGATTCTCTTCCTAAGAGTGGCTGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGCATGATAAAGGAAGGTaGCAACGGAAACATTATGAA +
Preference number: 2 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGHDKGR*QRKHYE
Trigger: TTCATAATGTTTCCGTTGGCACCTTCCTTTATCATG...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACCCCAAAGAAGGAGTGTaGAGCTCCCTGACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHPKEGV*SSLTSG
Trigger: GCCTGAGGTCAGGGAGCTGCACACTCCTTCTTTGGG...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACCATTTCAACCCTGAGTaGGGAGGAGCCGAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHHFNPE*GGAEED
Trigger: GTCCTCCTCGGCTCCTCCCCACTCAGGGTTGAAATG...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 90 bp CGACGCTTTTCTTCTCTTAGGACACTGACCACAGCTTGCAACTGCTaGGAAGTTCTTGCTATGTGGCAGAAACACAGACTTGGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: RRFSSLRTLTTACNC*EVLAMWQKHRLGKE
Trigger: CTCTTTACCAAGTCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAGAAAAGCGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp GAAGTGACACTTCTTAGACCCTTCAAGGTATGTGTTCTGTGGTCTCCACAATTAGCGGGGACTAATACCTaGTTTCCAAAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: EVTLLRPFKVCVLWSPQLAGTNT*FPKGQG
Trigger: ACCCTGCCCTTTTGGAAATCAGGTATTAGTCCCCGC...TAATTGTGGAGACCACAGAACACATACCTTGAAGGGTCTAAGAAGTGTCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp AGTCTGTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTGAGGGCATTTTATGTTCATaGGACAAACAACCCACCCAC +
Preference number: 2 (lower is better)
Translates to: SLSVTSIRYTEIQKFLPEGILCS*DKQPTH
Trigger: GTGGGTGGGTTGTTTGTCTCATGAACATAAAATGCC...CTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AGTCTGTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTGAGACAGACAACACAGACTaGGAAACAGAGGTATGGATG +
Preference number: 2 (lower is better)
Translates to: SLSVTSIRYTEIQKFLPETDNTD*ETEVWM
Trigger: CATCCATACCTCTGTTTCCCAGTCTGTGTTGTCTGT...CTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAAGTGACACTTCTTAGACCCTTCAAGGTATGTGTTCTGTGGTCTCCACAATTACCTGACCACACCTACTaGCAAGATCCTGCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: EVTLLRPFKVCVLWSPQLPDHTY*QDPALW
Trigger: CCAAAGAGCAGGATCTTGCCAGTAGGTGTGGTCAGG...TAATTGTGGAGACCACAGAACACATACCTTGAAGGGTCTAAGAAGTGTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AGTCTGTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTGAGAAGGTATGTGTTCTGTaGTCTCCACAATTACCTGGG +
Preference number: 2 (lower is better)
Translates to: SLSVTSIRYTEIQKFLPEKVCVL*SPQLPG
Trigger: CCCAGGTAATTGTGGAGACCACAGAACACATACCTT...CTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTACACTGACCACAGCTTaGAACTGCTTGGAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGTLTTA*NCLEVL
Trigger: AAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGT...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AGTCTGTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTGAGGAAGTTCTTGCTATGTaGCAGAAACACAGACTTGGT +
Preference number: 2 (lower is better)
Translates to: SLSVTSIRYTEIQKFLPEEVLAM*QKHRLG
Trigger: ACCAAGTCTGTGTTTCTGCCACATAGCAAGAACTTC...CTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR TCA 90 bp TGTGCTGTTAGACAAATGCATCTTAACTATGCCTTTGAGGACACATTCACAACTTGCGTCCTTTGTTCCTaGCCACACCTACTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: CAVRQMHLNYAFEDTFTTCVLCS*PHLLAR
Trigger: TCTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCA...AGTTGTGAATGTGTCCTCAAAGGCATAGTTAAGATGCATTTGTCTAACAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AAGAACTCAGCCACTCTTAGGAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCAAACAGAGGTATGGATaGCTGCAGAGACCCATGCCA +
Preference number: 2 (lower is better)
Translates to: KNSATLRKRILISALLEIKQRYG*LQRPMP
Trigger: TGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTT...GATTTCTAAGAGAGCAGAGATTAGGATTCTCTTCCTAAGAGTGGCTGAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR GCA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACAGCAAGGCTCTTCACTaGCCACAGTTTACTCATTTC +
Preference number: 2 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHSKALH*PQFTHF
Trigger: GAAATGAGTAAACTGTGGGCAGTGAAGAGCCTTGCT...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp GAAGTGACACTTCTTAGACCCTTCAAGGTATGTGTTCTGTGGTCTCCACAATTACTCCATCCAAAAGATTaGGCTCTTTCATACAGTGTG +
Preference number: 2 (lower is better)
Translates to: EVTLLRPFKVCVLWSPQLLHPKD*ALSYSV
Trigger: CACACTGTATGAAAGAGCCCAATCTTTTGGATGGAG...TAATTGTGGAGACCACAGAACACATACCTTGAAGGGTCTAAGAAGTGTCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 90 bp AGTAGCACTAATGCAGTGAATGAATTCCAGGACATACGTGATGGTTaGTTCACTTTTCCAGCCTCTGTTCTATCCTGTTTTAAATGGACA +
Preference number: 2 (lower is better)
Translates to: SSTNAVNEFQDIRDG*FTFPASVLSCFKWT
Trigger: TGTCCATTTAAAACAGGATAGAACAGAGGCTGGAAAAGTGAACAAACCATCACGTATGTCCTGGAATTCATTCACTGCATTAGTGCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CCA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACCAAACATTTCTTCTGTaGGTTTCAAAATACTTCCCA +
Preference number: 2 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHQTFLL*VSKYFP
Trigger: TGGGAAGTATTTTGAAACCCACAGAAGAAATGTTTG...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 90 bp GTCTTTAAACATAAATATACAATCACAGACTTTAGGGTTTGGATTTaGCCCATTCCTCATAAAGAAGGAACTGAGTACAGCTCGTCAAAA +
Preference number: 2 (lower is better)
Translates to: VFKHKYTITDFRVWI*PIPHKEGTEYSSSK
Trigger: TTTTGACGAGCTGTACTCAGTTCCTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATTTATGTTTAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GAGTGCAGGGCAAGCCCAGGGGCCTTGCTCCCAGGCTaGGAGCAGGTCAGGGGTCCACAACAAACAGGAGAA +
Preference number: 3 (lower is better)
Translates to: ECRASPGALLPG*EQVRGPQQTGE
Trigger: TTCTCCTGTTTGTTGTGGACCCCTGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CTCTTGCTTACACACAAGAGGCACCAGCTGGCAGCCTaGTTCAGCCAGCAAACACAGCCCGCCCTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LLLTHKRHQLAA*FSQQTQPALAQ
Trigger: CTGGGCTAGGGCGGGCTGTGTTTGCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp CTGTGTGCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACGACACTGACCACAGCTaGCAACTGCTTGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: LCAHSTRGLSTCRSVATHDTDHS*QLLGSS
Trigger: AGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTC...GTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CCACTGTGTGCCCACTCCACCAGAGGCCTTAGCACCTaGCGCTCTGTGGCCACCCACTACAATACATTCTGC +
Preference number: 3 (lower is better)
Translates to: PLCAHSTRGLST*RSVATHYNTFC
Trigger: GCAGAATGTATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGCACACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp ACTTCAGGCTCTTGCTTACACACAAGAGGCACCAGCTaGCAGCCTGCTTCAGCCAGCAAACACAGCCCGCCC +
Preference number: 3 (lower is better)
Translates to: TSGSCLHTRGTS*QPASASKHSPP
Trigger: GGGCGGGCTGTGTTTGCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp CCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTaGCCACCCACTACAATACATTCTGCCGCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: PTPPEALAPAAL*PPTTIHSAAPE
Trigger: TTCTGGAGCGGCAGAATGTATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp ATTCTGCCGCTCCAGAACCTCAGAAGGAACCGGCTGTaGGAGGCTGTCTGTCGCCTGCAGGCTTTGGTCAAG +
Preference number: 3 (lower is better)
Translates to: ILPLQNLRRNRL*EAVCRLQALVK
Trigger: CTTGACCAAAGCCTGCAGGCGACAGACAGCCTCTCACAGCCGGTTCCTTCTGAGGTTCTGGAGCGGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CTGGGAAACAGAGGTATGGATGGCTGCAGAGACCCATaGCACTGTGTGCCCACTCCACCAGAGGCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: LGNRGMDGCRDP*HCVPTPPEALA
Trigger: TGCTAAGGCCTCTGGTGGAGTGGGCACACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp ATGGCGGGCCATACAGCCCACACTTTGCTTCCAGGTTaGCAGCTACAGGGTGCGTCCTTTGTTCCTGACCAC +
Preference number: 3 (lower is better)
Translates to: MAGHTAHTLLPG*QLQGASFVPDH
Trigger: GTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTGGAAGCAAAGTGTGGGCTGTATGGCCCGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp AGACAACACAGACTGGGAAACAGAGGTATGGATGGCTaGAGAGACCCATGCCACTGTGTGCCCACTCCACCA +
Preference number: 3 (lower is better)
Translates to: RQHRLGNRGMDG*RDPCHCVPTPP
Trigger: TGGTGGAGTGGGCACACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAGTCTGTGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp TACAAGAAAACAAGCCTAAGGAAAGATGGAGCATTCTaGGCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: YKKTSLRKDGAF*ALSAGQAQGPC
Trigger: GCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGCCCAGAATGCTCCATCTTTCCTTAGGCTTGTTTTCTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGAGGGCACAGAGACTTTaGCCAGTACCCCTACAAAGC +
Preference number: 3 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGRAQRL*PVPLQS
Trigger: GCTTTGTAGGGGTACTGGCAAAAGTCTCTGTGCCCT...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp TCCAGGTTGACAGCTACAGGGTGCGTCCTTTGTTCCTaGCCACACCTACTGGCAAGATCCTGCTCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: SRLTATGCVLCS*PHLLARSCSLG
Trigger: ACCCAAAGAGCAGGATCTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAGCTGTCAACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GACTTTTGCCAGTACCCCTACAAAGCACATCTGCAATaGCGAGAGAACGGCGGTGTGGTGCTGACTGGTCAC +
Preference number: 3 (lower is better)
Translates to: DFCQYPYKAHLQ*RENGGVVLTGH
Trigger: GTGACCAGTCAGCACCACACCGCCGTTCTCTCGTCATTGCAGATGTGCTTTGTAGGGGTACTGGCAAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp GTTCCTGACCACACCTACTGGCAAGATCCTGCTCTTTaGGTGATCACTTCTGTAGGACAGAGAGGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: VPDHTYWQDPAL*VITSVGQRGLV
Trigger: CACCAGGCCTCTCTGTCCTACAGAAGTGATCACCCAAAGAGCAGGATCTTGCCAGTAGGTGTGGTCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp GTGGAACTGACTGACTCTCTCTTCAGCCCCAAAGGATaGAGACAGGAAACCAATCCTCCGGTCAGGGTTACC +
Preference number: 3 (lower is better)
Translates to: VELTDSLFSPKG*RQETNPPVRVT
Trigger: GGTAACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAGTCAGTCAGTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp GAAGGAGTGTGCAGCTCCCTGACCTCAGGCACACAATaGGCACAAGGACTTGCTTTTTACAGAACCCACACC +
Preference number: 3 (lower is better)
Translates to: EGVCSSLTSGTQ*AQGLAFYRTHT
Trigger: GGTGTGGGTTCTGTAAAAAGCAAGTCCTTGTGCCCATTGTGTGCCTGAGGTCAGGGAGCTGCACACTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CTGAGAGGGTTTTTGCTGGAGTCGGAAACAAGAGTGTaGGTCAGGGACCACAGAACAGGAGCACTACACCAC +
Preference number: 3 (lower is better)
Translates to: LRGFLLESETRV*VRDHRTGALHH
Trigger: GTGGTGTAGTGCTCCTGTTCTGTGGTCCCTGACTCACACTCTTGTTTCCGACTCCAGCAAAAACCCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp TGGGTGATCACTTCTGTAGGACAGAGAGGCCTGGTGTaGGGCAACCACATGATAAAGGAAGGTGCCAACGGA +
Preference number: 3 (lower is better)
Translates to: WVITSVGQRGLV*GNHMIKEGANG
Trigger: TCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCACACCAGGCCTCTCTGTCCTACAGAAGTGATCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CACAACTGTAGCGTCTGCACCACAAGTGGAACTGACTaGCTCTCTCTTCAGCCCCAAAGGATGGAGACAGGA +
Preference number: 3 (lower is better)
Translates to: HNCSVCTTSGTD*LSLQPQRMETG
Trigger: TCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAGTCAGTCAGTTCCACTTGTGGTGCAGACGCTACAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp TCAGGGACCACAGAACAGGAGCACTACACCACCACCTaGAGAAGCCAAGAAAGGAGAAAAGCTACATGGGGT +
Preference number: 3 (lower is better)
Translates to: SGTTEQEHYTTT*RSQERRKATWG
Trigger: ACCCCATGTAGCTTTTCTCCTTTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCTCCTGTTCTGTGGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp GGCTGTCTGTCGCCTGCAGGCTTTGGTCAAGTAAGATaGACACACAGTCAGCAGCAACAGCAAAATCCCATG +
Preference number: 3 (lower is better)
Translates to: GCLSPAGFGQVR*THSQQQQQNPM
Trigger: CATGGGATTTTGCTGTTGCTGCTGACTGTGTGTGCATCTTACTTGACCAAAGCCTGCAGGCGACAGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CTTGCTCGGGTCATTGGGAACTGGGTACCCAACACGTaGCTGGGTTCTGATCCTCATTTTCTACTCCCCAAA +
Preference number: 3 (lower is better)
Translates to: LARVIGNWVPNT*LGSDPHFLLPK
Trigger: TTTGGGGAGTAGAAAATGAGGATCAGAACCCAGGCACGTGTTGGGTACCCAGTTCCCAATGACCCGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp GAGTCACCCAAAATGCTACCAGGACTAAAGAGTGCTTaGTCGGGTCATTGGGAACTGGGTACCCAACACGTG +
Preference number: 3 (lower is better)
Translates to: ESPKMLPGLKSA*SGHWELGTQHV
Trigger: CACGTGTTGGGTACCCAGTTCCCAATGACCCGAGCAAGCACTCTTTAGTCCTGGTAGCATTTTGGGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp AGAATGACAGACAACACAGACTGGGAAACAGAGGTATaGATGGCTGCAGAGACCCATGCCACTGTGTGCCCA +
Preference number: 3 (lower is better)
Translates to: RMTDNTDWETEV*MAAETHATVCP
Trigger: TGGGCACACAGTGGCATGGGTCTCTGCAGCCATCCATACCTCTGTTTCCCAGTCTGTGTTGTCTGTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp TGCTGTGCACTACAAGAAAACAAGCCTAAGGAAAGATaGAGCATTCTGGGCGCTGAGTGCAGGGCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: CCALQENKPKER*SILGAECRASP
Trigger: TGGGCTTGCCCTGCACTCAGCGCCCAGAATGCTCCATCTTTCCTTAGGCTTGTTTTCTTGTAGTGCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp CTCGGGTCATTGGGAACTGGGTACCCAACACGTGCCTaGGTTCTGATCCTCATTTTCTACTCCCCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: LGSLGTGYPTRA*VLILIFYSPKK
Trigger: CTTCTTTGGGGAGTAGAAAATGAGGATCAGAACCCAGGCACGTGTTGGGTACCCAGTTCCCAATGACCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GTGGCCTTCGTGGCTCAGAGCAGATGGGAAGCCTTATaGGAAACAGATGGGAGCTGTTTCAAAGGCAATCTG +
Preference number: 3 (lower is better)
Translates to: VAFVAQSRWEAL*ETDGSCFKGNL
Trigger: CAGATTGCCTTTGAAACAGCTCCCATCTGTTTCTCATAAGGCTTCCCATCTGCTCTGAGCCACGAAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GAGGCTACAGCCGGAAGGGACATACAGCTAGCTTTCTaGAAGATGGAGGCCAATGGCCAGTTTTGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: EATAGRDIQLAF*KMEANGQFCED
Trigger: GTCTTCACAAAACTGGCCATTGGCCTCCATCTTTCAGAAAGCTAGCTGTATGTCCCTTCCGGCTGTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CATTGGGAACTGGGTACCCAACACGTGCCTGGGTTCTaGTCCTCATTTTCTACTCCCCAAAGAAGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: HWELGTQHVPGF*SSFSTPQRRSV
Trigger: CACACTCCTTCTTTGGGGAGTAGAAAATGAGGATCAGAACCCAGGCACGTGTTGGGTACCCAGTTCCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CTGAGAGTCACCCAAAATGCTACCAGGACTAAAGAGTaGTTGCTCGGGTCATTGGGAACTGGGTACCCAACA +
Preference number: 3 (lower is better)
Translates to: LRVTQNATRTKE*LLGSLGTGYPT
Trigger: TGTTGGGTACCCAGTTCCCAATGACCCGAGCAAGCACTCTTTAGTCCTGGTAGCATTTTGGGTGACTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp CTACAGGGTGCGTCCTTTGTTCCTGACCACACCTACTaGCAAGATCCTGCTCTTTGGGTGATCACTTCTGTA +
Preference number: 3 (lower is better)
Translates to: LQGASFVPDHTY*QDPALWVITSV
Trigger: TACAGAAGTGATCACCCAAAGAGCAGGATCTTGCCAGTAGGTGTGGTCAGGAACAAAGGACGCACCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CATGATTCAACTTCAGCTCAGCATCTGAGTCCAAGGTaGGCAGCAAGGCTCTTCACTGCCCACAGTTTACTC +
Preference number: 3 (lower is better)
Translates to: HDSTSAQHLSPR*AARLFTAHSLL
Trigger: GAGTAAACTGTGGGCAGTGAAGAGCCTTGCTGCTCACCTTGGACTCAGATGCTGAGCTGAAGTTGAATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CTATGGACGTGCCGTCCCTTAGGCATTTTATGTTCATaGGACAAACAACCCACCCACCCTGTGAGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: LWTCRPLGILCS*DKQPTHPVRKR
Trigger: CCTTTTCCTCACAGGGTGGGTGGGTTGTTTGTCTCATGAACATAAAATGCCTAAGGGACGGCACGTCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp GGTTTAACATGTCAATGCTGTCAGGCTATCGAGGCCTaGTTGTTACCTAAGCACTCACGTGACTGCAGGGTT +
Preference number: 3 (lower is better)
Translates to: GLTCQCCQAIEA*LLPKHSRDCRV
Trigger: AACCCTGCAGTCACGTGAGTGCTTAGGTAACAAGCAGGCCTCGATAGCCTGACAGCATTGACATGTTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp GCTGTGTGGTGTGCTCTGTGTGGTTTAACATGTCAATaGTGTCAGGCTATCGAGGCCTGCTTGTTACCTAAG +
Preference number: 3 (lower is better)
Translates to: AVWCALCGLTCQ*CQAIEACLLPK
Trigger: CTTAGGTAACAAGCAGGCCTCGATAGCCTGACAGCATTGACATGTTAAACCACACAGAGCACACCACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CTCCCTGACCTCAGGCACACAATGGGCACAAGGACTTaGTTTTTACAGAACCCACACCCTTTAACCAACTAC +
Preference number: 3 (lower is better)
Translates to: LPDLRHTMGTRT*FLQNPHPLTNY
Trigger: GTAGTTGGTTAAAGGGTGTGGGTTCTGTAAAAAGCAAGTCCTTGTGCCCATTGTGTGCCTGAGGTCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp TATGAGCGTCCTGAGGATGTGTCAGAGAGCCACAGATaGGGAAGGAAGGCTTTCCAACACAGCTACACAATT +
Preference number: 3 (lower is better)
Translates to: YERPEDVSESHR*GRKAFQHSYTI
Trigger: AATTGTGTAGCTGTGTTGGAAAGCCTTCCTTCCCCATCTGTGGCTCTCTGACACATCCTCAGGACGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp GCCATGCCAGTAGTCTACATGCTAAGAATCCGATCATaGGTTCAAACCAGGGACCAGCCCTACAACTTCACA +
Preference number: 3 (lower is better)
Translates to: AMPVVYMLRIRS*VQTRDQPYNFT
Trigger: TGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTCTTAGCATGTAGACTACTGGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CGGGGACTAATACCTGATTTCCAAAAGGGCAGGGTCTaGGATAACTCAGTGGTTACCTTCCACCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RGLIPDFQKGRV*DNSVVTFHPFF
Trigger: GAAGAAAGGGTGGAAGGTAACCACTGAGTTATCTCAGACCCTGCCCTTTTGGAAATCAGGTATTAGTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GATGCACACACAGTCAGCAGCAACAGCAAAATCCCATaGTTGCTTTCCCTAAGGACCATGGACACCAAAAGC +
Preference number: 3 (lower is better)
Translates to: DAHTVSSNSKIP*LLSLRTMDTKS
Trigger: GCTTTTGGTGTCCATGGTCCTTAGGGAAAGCAATCATGGGATTTTGCTGTTGCTGCTGACTGTGTGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GTCCACAACAAACAGGAGAAGTATGGAGACTGCCACTaGCTTGGAAATAGCTCCGAAGGAGGTGCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: VHNKQEKYGDCH*LGNSSEGGASL
Trigger: CAAAGAAGCACCTCCTTCGGAGCTATTTCCAAGTCAGTGGCAGTCTCCATACTTCTCCTGTTTGTTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp TACCCAAAAATGCATCTAGCTGATCCTGCTAACAGATaGCACAAAGGGCTGGAGAGTTCTCCACTGAGCACA +
Preference number: 3 (lower is better)
Translates to: YPKMHLADPANR*HKGLESSPLST
Trigger: TGTGCTCAGTGGAGAACTCTCCAGCCCTTTGTGCCATCTGTTAGCAGGATCAGCTAGATGCATTTTTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp GACAGGAAACCAATCCTCCGGTCAGGGTTACCTGTAGCAGAGAAGACCTACCCAGCTTCTTTGCTTCTTTaGTTTTCTCAAACAGAGAGT +
Preference number: 3 (lower is better)
Translates to: DRKPILRSGLPVAEKTYPASLLL*FSQTES
Trigger: ACTCTCTGTTTGAGAAAACAAAAGAAGCAAAGAAGC...TGGGTAGGTCTTCTCTGCTACAGGTAACCCTGACCGGAGGATTGGTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CGACGCTTTTCTTCTCTTAGGACACTGACCACAGCTTaGAACTGCTTGGAAGTTCTTGCTATGTGGCAGAAA +
Preference number: 3 (lower is better)
Translates to: RRFSSLRTLTTA*NCLEVLAMWQK
Trigger: TTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAGAAAAGCGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp ATCGAGGCCTGCTTGTTACCTAAGCACTCACGTGACTaGAGGGTTTGTGCTGTTAGACAAATGCATCTTAAC +
Preference number: 3 (lower is better)
Translates to: IEACLLPKHSRD*RVCAVRQMHLN
Trigger: GTTAAGATGCATTTGTCTAACAGCACAAACCCTGCAGTCACGTGAGTGCTTAGGTAACAAGCAGGCCTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp ACCCGTATAACAGGACCCTGGTTCCCTTCCTTCAGATaGAAACTTGCCTTTTCAAACAGCAAAGGGTCTGAA +
Preference number: 3 (lower is better)
Translates to: TRITGPWFPSFR*KLAFSNSKGSE
Trigger: TTCAGACCCTTTGCTGTTTGAAAAGGCAAGTTTTCATCTGAAGGAAGGGAACCAGGGTCCTGTTATACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp CAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTaGGAGTCACCCAAAATGCTACCAGGACTAAAGAGT +
Preference number: 3 (lower is better)
Translates to: QHQIHRDPEVLA*ESPKMLPGLKS
Trigger: ACTCTTTAGTCCTGGTAGCATTTTGGGTGACTCTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp AAGGGGGCAACATTACATCTCAGCAGGAACAGTGACTaGAAATTTGGCCACAAAGTGCTTACAGTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: KGATLHLSRNSD*KFGHKVLTVFL
Trigger: GAGAAACACTGTAAGCACTTTGTGGCCAAATTTGCAGTCACTGTTCCTGCTGAGATGTAATGTTGCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACCAGAACTTCAGGCTCTaGCTTACACACAAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHQNFRL*LTHKRH
Trigger: GTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGTTCTG...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp TTCTCAAACAGAGAGTACCCTCAGTCAGTAAAAGCATaGTTCAACTTCAGCTCAGCATCTGAGTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: FSNREYPQSVKA*FNFSSASESKV
Trigger: CACCTTGGACTCAGATGCTGAGCTGAAGTTGAATCATGCTTTTACTGACTGAGGGTACTCTCTGTTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp GTGTTACAGAAGTTACACAAAGGGCAAGTCTGTCAGTaGCCAGCATCAGATACACAGAGATCCAGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: VLQKLHKGQVCQ*PASDTQRSRSS
Trigger: AGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACTTGCCCTTTGTGTAACTTCTGTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp TTTTCTTCTCTTAGGACACTGACCACAGCTTGCAACTaGTTGGAAGTTCTTGCTATGTGGCAGAAACACAGA +
Preference number: 3 (lower is better)
Translates to: FSSLRTLTTACN*LEVLAMWQKHR
Trigger: TCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGTGGTCAGTGTCCTAAGAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp AGCACCTCCCCGCCTTCCCATTATCCTTATCTACTCTaGTCTCTAGAATCTATCACTCTGATTACAAAGCAT +
Preference number: 3 (lower is better)
Translates to: STSPPSHYPYLL*SLESITLITKH
Trigger: ATGCTTTGTAATCAGAGTGATAGATTCTAGAGAGCAGAGTAGATAAGGATAATGGGAAGGCGGGGAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CCA 72 bp TGTTTTCTTAGCTTTGAGACAGTGGTTCAGAGTCTCTaGTTAGCCTTCTTGGTTCAAGGGGGCAACATTACA +
Preference number: 3 (lower is better)
Translates to: CFLSFETVVQSL*LAFLVQGGNIT
Trigger: TGTAATGTTGCCCCCTTGAACCAAGAAGGCTAACCAGAGACTCTGAACCACTGTCTCAAAGCTAAGAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp AGTCTGTCAGTGACCAGCATCAGATACACAGAGATCCAGAAGTTCTTGCCTGAGTTTAGGGTTTGGATTTaGCCCATTCCTCATAAAGAA +
Preference number: 3 (lower is better)
Translates to: SLSVTSIRYTEIQKFLPEFRVWI*PIPHKE
Trigger: TTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAA...CTCAGGCAAGAACTTCTGGATCTCTGTGTATCTGATGCTGGTCACTGACAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp TCACAGCCAGGGTGTACTATCTTTGCACTTAGTTCATaGGGAATGACGATTTGTAAAGGAGCCAGTCTATCA +
Preference number: 3 (lower is better)
Translates to: SQPGCTIFALSS*GMTICKGASLS
Trigger: TGATAGACTGGCTCCTTTACAAATCGTCATTCCTCATGAACTAAGTGCAAAGATAGTACACCCTGGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp ACTCACGTGACTGCAGGGTTTGTGCTGTTAGACAAATaGATCTTAACTATGCCTTTGAGGACACATTCACAA +
Preference number: 3 (lower is better)
Translates to: THVTAGFVLLDK*ILTMPLRTHSQ
Trigger: TTGTGAATGTGTCCTCAAAGGCATAGTTAAGATGCATTTGTCTAACAGCACAAACCCTGCAGTCACGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp AGAACATGGATATACCAACGTCATGCATCACGGGATTaGTTTTTCCAGACTGGCTTGTTCTTTAACAAGGCT +
Preference number: 3 (lower is better)
Translates to: RTWIYQRHASRD*FFQTGLFFNKA
Trigger: AGCCTTGTTAAAGAACAAGCCAGTCTGGAAAAAGCAATCCCGTGATGCATGACGTTGGTATATCCATGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp AAGAACTCAGCCACTCTTAGGAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCACTGCTTGGAAGTTCTaGCTATGTGGCAGAAACACA +
Preference number: 3 (lower is better)
Translates to: KNSATLRKRILISALLEITAWKF*LCGRNT
Trigger: TGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGT...GATTTCTAAGAGAGCAGAGATTAGGATTCTCTTCCTAAGAGTGGCTGAGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTTGGGTTTCACTGTATTaGGTACCAAAGCAAATTTTC +
Preference number: 3 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGWVSLY*VPKQIF
Trigger: GAAAATTTGCTTTGGTACCAAATACAGTGAAACCCA...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp TTCTCCATCCAAAAGATTGGGCTCTTTCATACAGTGTaGTTTCCCTCTTCTGGCACCTCAAAATGTAAAGAA +
Preference number: 3 (lower is better)
Translates to: FSIQKIGLFHTV*FPSSGTSKCKE
Trigger: TTCTTTACATTTTGAGGTGCCAGAAGAGGGAAAGCACACTGTATGAAAGAGCCCAATCTTTTGGATGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp CCTAATCTCTGCTCTCTTAGAAATCCCTTCTTTAACTaGATAGTATTTACTTGTGCTCTAGAGAGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: PNLCSLRNPFFN*IVFTCALESRA
Trigger: TGCCCTGCTCTCTAGAGCACAAGTAAATACTATGCAGTTAAAGAAGGGATTTCTAAGAGAGCAGAGATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR-3UTR CAA 90 bp AATATACAATCACAGACTTTAGGGTTTGGATTTTGCCCATTCCTCATAAAGAAGACAGCTTGCAACTGCTaGGAAGTTCTTGCTATGTGG +
Preference number: 3 (lower is better)
Translates to: NIQSQTLGFGFCPFLIKKTACNC*EVLAMW
Trigger: CCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGT...CTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp TCAGGATTCATCCGTGTATCACAGCAACACATTCAGTaGTTTGAGGTGAGAAAATATAGTCTGACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: SGFIRVSQQHIQ*FEVRKYSLTEE
Trigger: TTCTTCTGTCAGACTATATTTTCTCACCTCAAAGCACTGAATGTGTTGCTGTGATACACGGATGAATCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp AATTCTTTAAACTTGAAAACAGAGGGATCAAGGAAGTaGCACTTCTTAGACCCTTCAAGGTATGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: NSLNLKTEGSRK*HFLDPSRYVFC
Trigger: ACAGAACACATACCTTGAAGGGTCTAAGAAGTGTCACTTCCTTGATCCCTCTGTTTTCAAGTTTAAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR TCA 72 bp AAAACAGTTCCAATGAACAAAGTAGCACTAATGCAGTaGATGAATTCCAGGACATACGTGATGGTTTGTTCA +
Preference number: 3 (lower is better)
Translates to: KTVPMNKVALMQ*MNSRTYVMVCS
Trigger: TGAACAAACCATCACGTATGTCCTGGAATTCATTCACTGCATTAGTGCTACTTTGTTCATTGGAACTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR GCA 72 bp ATAAATATACAATCACAGACTTTAGGGTTTGGATTTTaGCCATTCCTCATAAAGAAGGAACTGAGTACAGCT +
Preference number: 3 (lower is better)
Translates to: INIQSQTLGFGF*PFLIKKELSTA
Trigger: AGCTGTACTCAGTTCCTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp GCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACTACAATTGCTCCCCCGGAGCCTaGCCCTCTGAGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: AHSTRGLSTCRSVATHYNCSPGA*PSEAPA
Trigger: GGCTGGTGCCTCAGAGGGTCAGGCTCCGGGGGAGCA...ATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp GCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACTACAATCGCTTTCCCTCGGGGTaGGTAGGGACCCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AHSTRGLSTCRSVATHYNRFPSG*VGTRMV
Trigger: CACCATCCGGGTCCCTACCCACCCCGAGGGAAAGCG...ATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp CTGTGTGCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACAAGCCAGTGGAGAGCTaGCGTTGGTGCTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LCAHSTRGLSTCRSVATHKPVES*RWCFPD
Trigger: ATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCTT...GTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTTCTGAGGCGGCCGCCTaGCTCTCCTCCACTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGSEAAA*LSSTPR
Trigger: ACGGGGAGTGGAGGAGAGCCAGGCGGCCGCCTCAGA...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp GCGCTGAGTGCAGGGCAAGCCCAGGGGCCTTGCTCCCAGGCTGAGAGCAGGTCAAGATTCCAAGTCCGCTaGAAGAACATCTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALSAGQAQGPCSQAESRSRFQVR*KNIYSP
Trigger: GGGGCTATAGATGTTCTTTCAGCGGACTTGGAATCT...TGACCTGCTCTCAGCCTGGGAGCAAGGCCCCTGGGCTTGCCCTGCACTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp GCCCACTCCACCAGAGGCCTTAGCACCTGCCGCTCTGTGGCCACCCACTACAATGGAGAGACTTTCCTGTaGTCCCCCAGAAGATCTGCA +
Preference number: 4 (lower is better)
Translates to: AHSTRGLSTCRSVATHYNGETFL*SPRRSA
Trigger: TGCAGATCTTCTGGGGGACCACAGGAAAGTCTCTCC...ATTGTAGTGGGTGGCCACAGAGCGGCAGGTGCTAAGGCCTCTGGTGGAGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp GAATCCGATCATGGGTTCAAACCAGGGACCAGCCCTACAACTTCACAGCCAGGGATCTCACTGAGAACCTaGGTCTGGCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESDHGFKPGTSPTTSQPGISLRT*VWPAGS
Trigger: GCTGCCAGCAGGCCAGACCCAGGTTCTCAGTGAGAT...CCCTGGCTGTGAAGTTGTAGGGCTGGTCCCTGGTTTGAACCCATGATCGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp ACAGCTTGCAACTGCTTGGAAGTTCTTGCTATGTGGCAGAAACACAGACTTGGTGCCGGTACACAGGCATaGCCTCCCCATAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TACNCLEVLAMWQKHRLGAGTQA*PPHSGP
Trigger: GGGGCCGCTATGGGGAGGTCATGCCTGTGTACCGGC...ACCAAGTCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp ACAAGGCTTCAAAGCCCCACACAGAACTTCAGGCTCTaGCTTACACACAAGAGGCACCAGCTGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TRLQSPTQNFRL*LTHKRHQLAAC
Trigger: GCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGTTCTGTGTGGGGCTTTGAAGCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR GCA 90 bp AGTGAGGTCTCCCAGCCTGAGCTAGAGACTAAGAAGACCCAGCAGGCAGGCAGGATCATAGTCATCAGTTaGAAATTCCCAGCACACGCG +
Preference number: 4 (lower is better)
Translates to: SEVSQPELETKKTQQAGRIIVIS*KFPAHA
Trigger: CGCGTGTGCTGGGAATTTGCAACTGATGACTATGAT...CCTGCCTGCCTGCTGGGTCTTCTTAGTCTCTAGCTCAGGCTGGGAGACCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTCTGTGGCCTGTATGGTaGGGACTCGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGLWPVW*GLGCWI
Trigger: GATCCAGCAGCCGAGTCCTCACCATACAGGCCACAG...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR GCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTAGTAGAGAGTCTTGTTaGGGAGCAAGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGSRESC*GARSRS
Trigger: ACTCCTACTCCTTGCTCCGCAACAAGACTCTCTACT...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR GCA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTTCTATAGCCCCAGTGTaGTCAGACTGGATCATAACT +
Preference number: 4 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGSIAPV*SDWIIT
Trigger: AGTTATGATCCAGTCTGAGCACACTGGGGCTATAGA...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp GCAGGGCACAAGGCTTCAAAGCCCCACACAGAACTTCAGGCTCTTGCTTACACATCTGTAGATCTTCCGTaGTATCCTTACTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGHKASKPHTELQALAYTSVDLP*YPYSLE
Trigger: CTCCAGCGAGTAAGGATACCACGGAAGATCTACAGA...TGTGTAAGCAAGAGCCTGAAGTTCTGTGTGGGGCTTTGAAGCCTTGTGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp AGAGTCACCCAAAATGCTACCAGGACTAAAGAGTGCTaGCTCGGGTCATTGGGAACTGGGTACCCAACACGT +
Preference number: 4 (lower is better)
Translates to: RVTQNATRTKEC*LGSLGTGYPTR
Trigger: ACGTGTTGGGTACCCAGTTCCCAATGACCCGAGCAAGCACTCTTTAGTCCTGGTAGCATTTTGGGTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp TGTGCTGTTAGACAAATGCATCTTAACTATGCCTTTGAGGACACATTCACAACTCGGAGCCTGACCCTCTaGGGCACCAGCCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: CAVRQMHLNYAFEDTFTTRSLTL*GTSHVL
Trigger: CAGAACGTGGCTGGTGCCTCAGAGGGTCAGGCTCCG...AGTTGTGAATGTGTCCTCAAAGGCATAGTTAAGATGCATTTGTCTAACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp TTAACATGTCAATGCTGTCAGGCTATCGAGGCCTGCTaGTTACCTAAGCACTCACGTGACTGCAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LTCQCCQAIEAC*LPKHSRDCRVC
Trigger: ACAAACCCTGCAGTCACGTGAGTGCTTAGGTAACAAGCAGGCCTCGATAGCCTGACAGCATTGACATGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR GCA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTGCACGGTTATATCAGTaGTGGTTACTGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGARLYQ*WLLGSS
Trigger: ACTGGACCCCAGTAACCAGCACTGATATAACCGTGC...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR GCA 90 bp AAGAACTCAGCCACTCTTAGGAAGAGAATCCTAATCTCTGCTCTCTTAGAAATCTCATGGCTGCCAGCTTaGACATCTCGGTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KNSATLRKRILISALLEISWLPA*TSRWLS
Trigger: GGACAGCCACCGAGATGTGCAAGCTGGCAGCCATGA...GATTTCTAAGAGAGCAGAGATTAGGATTCTCTTCCTAAGAGTGGCTGAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp ACAGCTTGCAACTGCTTGGAAGTTCTTGCTATGTGGCAGAAACACAGACTTGGTGGTATCCTTACTCGCTaGAGATACCATCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TACNCLEVLAMWQKHRLGGILTR*RYHLWP
Trigger: AGGCCACAGATGGTATCTCCAGCGAGTAAGGATACC...ACCAAGTCTGTGTTTCTGCCACATAGCAAGAACTTCCAAGCAGTTGCAAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp AATATACAATCACAGACTTTAGGGTTTGGATTTTGCCCATTCCTCATAAAGAAGCAGATCTTCCTTCTCTaGGGCGGCCGCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NIQSQTLGFGFCPFLIKKQIFLL*GGRLAL
Trigger: GAGAGCCAGGCGGCCGCCTCAGAGAAGGAAGATCTG...CTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR TCA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTAGGAGTTATCAAACTTaGGCAAGTAGATGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGRSYQT*ASRCPP
Trigger: GGGAGGGCATCTACTTGCTCAAGTTTGATAACTCCT...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp CACAGTTTACTCATTTCTCAGAGGGCACAGAGACTTTaGCCAGTACCCCTACAAAGCACATCTGCAATGACG +
Preference number: 4 (lower is better)
Translates to: HSLLISQRAQRL*PVPLQSTSAMT
Trigger: CGTCATTGCAGATGTGCTTTGTAGGGGTACTGGCAAAAGTCTCTGTGCCCTCTGAGAAATGAGTAAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp AGCATGTCTCATGGTTGTCAGCTGCTTAAACATTTAGCAAGGAAACACAATCACCCCGTAGAGAACTCCTaGAGCCTCTCTCTACATCTC +
Preference number: 4 (lower is better)
Translates to: SMSHGCQLLKHLARKHNHPVENS*SLSLHL
Trigger: GAGATGTAGAGAGAGGCTCCAGGAGTTCTCTACGGG...GTGATTGTGTTTCCTTGCTAAATGTTTAAGCAGCTGACAACCATGAGACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp AATATACAATCACAGACTTTAGGGTTTGGATTTTGCCCATTCCTCATAAAGAAGGCTTGCACATCTCGGTaGCTGTCCCGCCGGTACACA +
Preference number: 4 (lower is better)
Translates to: NIQSQTLGFGFCPFLIKKACTSR*LSRRYT
Trigger: TGTGTACCGGCGGGACAGCCACCGAGATGTGCAAGC...CTTCTTTATGAGGAATGGGCAAAATCCAAACCCTAAAGTCTGTGATTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp CTATGTGATAGTTCTCCTTCAAGGCCTTTGGTGACCTaGGTTGGCATCAGCATACGATACGAAACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LCDSSPSRPLVT*VGISIRYETVR
Trigger: CCTTACTGTTTCGTATCGTATGCTGATGCCAACCAAGGTCACCAAAGGCCTTGAAGGAGAACTATCACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CCA 90 bp GTGAGGCAACCACATGATAAAGGAAGGTGCCAACGGAAACATTATGAAGAGGGTATCAGTGCTGGTTACTaGGGTCCAGTCAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: VRQPHDKGRCQRKHYEEGISAGY*GPVKIN
Trigger: GTTTATTTTGACTGGACCCCAGTAACCAGCACTGAT...ACCCTCTTCATAATGTTTCCGTTGGCACCTTCCTTTATCATGTGGTTGCCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp CAACATTACATCTCAGCAGGAACAGTGACTGCAAATTaGGCCACAAAGTGCTTACAGTGTTTCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: QHYISAGTVTAN*ATKCLQCFSAH
Trigger: GTGTGCAGAGAAACACTGTAAGCACTTTGTGGCCAAATTTGCAGTCACTGTTCCTGCTGAGATGTAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
3UTR CAA 72 bp AATGCAGTGAATGAATTCCAGGACATACGTGATGGTTaGTTCACTTTTCCAGCCTCTGTTCTATCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: NAVNEFQDIRDG*FTFPASVLSCF
Trigger: AAAACAGGATAGAACAGAGGCTGGAAAAGTGAACAAACCATCACGTATGTCCTGGAATTCATTCACTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 90 bp CTGACGTTGGTGCTTTCCAGATCTTCCTTCTCTGAGGCGGCCGCCTaGCTCTCCTCCACTCCCCGTCGGTCCCCGACGCCGCCCGCCGAC +
Preference number: 5 (lower is better)
Translates to: LTLVLSRSSFSEAAA*LSSTPRRSPTPPAD
Trigger: GTCGGCGGGCGGCGTCGGGGACCGACGGGGAGTGGAGGAGAGCCAGGCGGCCGCCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 90 bp ACCTGGGTCTGGCCTGCTGGCAGCGCCGCCTGCTCCCCCGGAGCCTaGCCCTCTGAGGCACCAGCCACGTTCTGTAGATCTTCCGTGGTA +
Preference number: 5 (lower is better)
Translates to: TWVWPAGSAACSPGA*PSEAPATFCRSSVV
Trigger: TACCACGGAAGATCTACAGAACGTGGCTGGTGCCTCAGAGGGTCAGGCTCCGGGGGAGCAGGCGGCGCTGCCAGCAGGCCAGACCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 90 bp AGCCAGTGGAGAGCTGACGTTGGTGCTTTCCAGATCTTCCTTCTCTaGGGCGGCCGCCTGGCTCTCCTCCACTCCCCGTCGGTCCCCGAC +
Preference number: 5 (lower is better)
Translates to: SQWRADVGAFQIFLL*GGRLALLHSPSVPD
Trigger: GTCGGGGACCGACGGGGAGTGGAGGAGAGCCAGGCGGCCGCCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 90 bp TGCCAGCTTGCACATCTCGGTGGCTGTCCCGCCGGTACACAGGCATaGCCTCCCCATAGCGGCCCCGTAGAGAACTCCTGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CQLAHLGGCPAGTQA*PPHSGPVENSWSLS
Trigger: AGAGAGGCTCCAGGAGTTCTCTACGGGGCCGCTATGGGGAGGTCATGCCTGTGTACCGGCGGGACAGCCACCGAGATGTGCAAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 90 bp GTGAGGACTCGGCTGCTGGATCAGAAGCAGAAGCCAGTGGAGAGCTaGCGTTGGTGCTTTCCAGATCTTCCTTCTCTGAGGCGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: VRTRLLDQKQKPVES*RWCFPDLPSLRRPP
Trigger: AGGCGGCCGCCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCTTCTGCTTCTGATCCAGCAGCCGAGTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 90 bp TGCTCAGACTGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTTaGTACTTGGCCATCTCACTGAGAACCTGGGTCTGGCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: CSDWIITVSSGRCGA*YLAISLRTWVWPAG
Trigger: GCCAGCAGGCCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 90 bp CCCAGTGTGCTCAGACTGGATCATAACTGTGTCCTCAGGTCGCTGTaGAGCTTGGTACTTGGCCATCTCACTGAGAACCTGGGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PSVLRLDHNCVLRSL*SLVLGHLTENLGLA
Trigger: GGCCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCACACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 90 bp GAGCCTGACCCTCTGAGGCACCAGCCACGTTCTGTAGATCTTCCGTaGTATCCTTACTCGCTGGAGATACCATCTGTGGCCTGTATGGTG +
Preference number: 5 (lower is better)
Translates to: EPDPLRHQPRSVDLP*YPYSLEIPSVACMV
Trigger: CACCATACAGGCCACAGATGGTATCTCCAGCGAGTAAGGATACCACGGAAGATCTACAGAACGTGGCTGGTGCCTCAGAGGGTCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CAA 90 bp AAACAAGAGTGTGAGTCAGGGACCACAGAACAGGAGCACTACACCACCACCTGCATCATGGCTGCCAGCTaGCACATCTCGGTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KQECESGTTEQEHYTTTCIMAAS*HISVAV
Trigger: GACAGCCACCGAGATGTGCAAGCTGGCAGCCATGAT...GCAGGTGGTGGTGTAGTGCTCCTGTTCTGTGGTCCCTGACTCACACTCTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 90 bp CCTCCTCTTCATCCTCTTCCTCCTCCTCATCCTCACTGGAGTCACTaGCCTGCACGGTTATATCAGTGCTGGTTACTGGGGTCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: PPLHPLPPPHPHWSH*PARLYQCWLLGSSQ
Trigger: TTGACTGGACCCCAGTAACCAGCACTGATATAACCGTGCAGGTCAGTGACTCCAGTGAGGATGAGGAGGAGGAAGAGGATGAAGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CAA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTTTGAACTCCTTCACTTaGGCAAAGGTCCAGACGCAC +
Preference number: 5 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGLNSFT*AKVQTH
Trigger: GTGCGTCTGGACCTTTGCCAAAGTGAAGGAGTTCAA...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CAA 90 bp GAACTTCAGGCTCTTGCTTACACACAAGAGGCACCAGCTGGCAGCCTGCTTCAGTTCTCCTTGCCCAGCTaGCTTTTGAACTCCTTCACT +
Preference number: 5 (lower is better)
Translates to: ELQALAYTQEAPAGSLLQFSLPS*LLNSFT
Trigger: AGTGAAGGAGTTCAAAAGCAAGCTGGGCAAGGAGAA...CTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTGTGTAAGCAAGAGCCTGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS GCA 90 bp TCTGCAGATTCCAAGTCCGCTGAAAGAACATCTATAGCCCCAGTGTaGTCAGACTGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SADSKSAERTSIAPV*SDWIITVSSGRCGA
Trigger: AGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCACACTGGGGCTATAGATGTTCTTTCAGCGGACTTGGAATCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 90 bp TCCAAGTCCGCTGAAAGAACATCTATAGCCCCAGTGTGCTCAGACTaGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SKSAERTSIAPVCSD*IITVSSGRCGAWYL
Trigger: CAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCACACTGGGGCTATAGATGTTCTTTCAGCGGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CAA 90 bp GACAGGAAACCAATCCTCCGGTCAGGGTTACCTGTAGCAGAGAAGACCTACCCATTGCCCAGCTTGCTTTaGAACTCCTTCACTTTGGCA +
Preference number: 5 (lower is better)
Translates to: DRKPILRSGLPVAEKTYPLPSLL*NSFTLA
Trigger: TGCCAAAGTGAAGGAGTTCAAAAGCAAGCTGGGCAA...TGGGTAGGTCTTCTCTGCTACAGGTAACCCTGACCGGAGGATTGGTTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS-3UTR CAA 90 bp CTCTCTCTTCAGCCCCAAAGGATGGAGACAGGAAACCAATCCTCCGGTCAGGGTTATCATAGTCATCAGTaGCAAATTCCCAGCACACGC +
Preference number: 5 (lower is better)
Translates to: LSLQPQRMETGNQSSGQGYHSHQ*QIPSTR
Trigger: GCGTGTGCTGGGAATTTGCAACTGATGACTATGATA...ACCCTGACCGGAGGATTGGTTTCCTGTCTCCATCCTTTGGGGCTGAAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp CTTGGCCATCTCACTGAGAACCTGGGTCTGGCCTGCTaGCAGCGCCGCCTGCTCCCCCGGAGCCTGACCCTC +
Preference number: 6 (lower is better)
Translates to: LGHLTENLGLAC*QRRLLPRSLTL
Trigger: GAGGGTCAGGCTCCGGGGGAGCAGGCGGCGCTGCCAGCAGGCCAGACCCAGGTTCTCAGTGAGATGGCCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 72 bp TGGCCTGCTGGCAGCGCCGCCTGCTCCCCCGGAGCCTaGCCCTCTGAGGCACCAGCCACGTTCTGTAGATCT +
Preference number: 6 (lower is better)
Translates to: WPAGSAACSPGA*PSEAPATFCRS
Trigger: AGATCTACAGAACGTGGCTGGTGCCTCAGAGGGTCAGGCTCCGGGGGAGCAGGCGGCGCTGCCAGCAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp GTGCTTTCCAGATCTTCCTTCTCTGAGGCGGCCGCCTaGCTCTCCTCCACTCCCCGTCGGTCCCCGACGCCG +
Preference number: 6 (lower is better)
Translates to: VLSRSSFSEAAA*LSSTPRRSPTP
Trigger: CGGCGTCGGGGACCGACGGGGAGTGGAGGAGAGCCAGGCGGCCGCCTCAGAGAAGGAAGATCTGGAAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 72 bp GCACATCTCGGTGGCTGTCCCGCCGGTACACAGGCATaGCCTCCCCATAGCGGCCCCGTAGAGAACTCCTGG +
Preference number: 6 (lower is better)
Translates to: AHLGGCPAGTQA*PPHSGPVENSW
Trigger: CCAGGAGTTCTCTACGGGGCCGCTATGGGGAGGTCATGCCTGTGTACCGGCGGGACAGCCACCGAGATGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp TGTGGAGCTTGGTACTTGGCCATCTCACTGAGAACCTaGGTCTGGCCTGCTGGCAGCGCCGCCTGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: CGAWYLAISLRT*VWPAGSAACSP
Trigger: GGGGGAGCAGGCGGCGCTGCCAGCAGGCCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp GTTGCAAATTCCCAGCACACGCGCTTTCCCTCGGGGTaGGTAGGGACCCGGATGGTGACCACTTCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: VANSQHTRFPSG*VGTRMVTTSPR
Trigger: GCGGGGAGAAGTGGTCACCATCCGGGTCCCTACCCACCCCGAGGGAAAGCGCGTGTGCTGGGAATTTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 90 bp GACTCGGCTGCTGGATCAGAAGCAGAAGCCAGTGGAGAGCTGACGTaGGTGCTTTCCAGATCTTCCTTCTCTGAGGCGGCCGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: DSAAGSEAEASGELT*VLSRSSFSEAAAWL
Trigger: GAGCCAGGCGGCCGCCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCTTCTGCTTCTGATCCAGCAGCCGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 90 bp GACTGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTTGGTACTaGGCCATCTCACTGAGAACCTGGGTCTGGCCTGCTGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: DWIITVSSGRCGAWY*AISLRTWVWPAGSA
Trigger: GGCGCTGCCAGCAGGCCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 90 bp GTGCTCAGACTGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTaGGTACTTGGCCATCTCACTGAGAACCTGGGTCTGGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: VLRLDHNCVLRSLWS*VLGHLTENLGLACW
Trigger: CCAGCAGGCCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 72 bp GCTGGATCAGAAGCAGAAGCCAGTGGAGAGCTGACGTaGGTGCTTTCCAGATCTTCCTTCTCTGAGGCGGCC +
Preference number: 6 (lower is better)
Translates to: AGSEAEASGELT*VLSRSSFSEAA
Trigger: GGCCGCCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCTTCTGCTTCTGATCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 72 bp CGGCTGCTGGATCAGAAGCAGAAGCCAGTGGAGAGCTaGCGTTGGTGCTTTCCAGATCTTCCTTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: RLLDQKQKPVES*RWCFPDLPSLR
Trigger: CCTCAGAGAAGGAAGATCTGGAAAGCACCAACGTCAGCTCTCCACTGGCTTCTGCTTCTGATCCAGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp CCTCTGAGGCACCAGCCACGTTCTGTAGATCTTCCGTaGTATCCTTACTCGCTGGAGATACCATCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: PLRHQPRSVDLP*YPYSLEIPSVA
Trigger: GGCCACAGATGGTATCTCCAGCGAGTAAGGATACCACGGAAGATCTACAGAACGTGGCTGGTGCCTCAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp TGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTTaGTACTTGGCCATCTCACTGAGAACCTGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: WIITVSSGRCGA*YLAISLRTWVW
Trigger: CCAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 72 bp CTGGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCTaGGTACTTGGCCATCTCACTGAGAACCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LDHNCVLRSLWS*VLGHLTENLGL
Trigger: CAGACCCAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 90 bp GTGACCACTTCTCCCCGCTTCACTACCAGACGGCTGTTCTTCTCCTaGCCCAGCTTGCTTTTGAACTCCTTCACTTTGGCAAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: VTTSPRFTTRRLFFS*PSLLLNSFTLAKVQ
Trigger: CTGGACCTTTGCCAAAGTGAAGGAGTTCAAAAGCAAGCTGGGCAAGGAGAAGAACAGCCGTCTGGTAGTGAAGCGGGGAGAAGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 72 bp GTGGTCCCCCAGAAGATCTGCAGATTCCAAGTCCGCTaGAAGAACATCTATAGCCCCAGTGTGCTCAGACTG +
Preference number: 6 (lower is better)
Translates to: VVPQKICRFQVR*KNIYSPSVLRL
Trigger: CAGTCTGAGCACACTGGGGCTATAGATGTTCTTTCAGCGGACTTGGAATCTGCAGATCTTCTGGGGGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp CTCAGACTGGATCATAACTGTGTCCTCAGGTCGCTGTaGAGCTTGGTACTTGGCCATCTCACTGAGAACCTG +
Preference number: 6 (lower is better)
Translates to: LRLDHNCVLRSL*SLVLGHLTENL
Trigger: CAGGTTCTCAGTGAGATGGCCAAGTACCAAGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CAA 72 bp TTCTCCTTGCCCAGCTTGCTTTTGAACTCCTTCACTTaGGCAAAGGTCCAGACGCACGGAGGAGCCATCAGA +
Preference number: 6 (lower is better)
Translates to: FSLPSLLLNSFT*AKVQTHGGAIR
Trigger: TCTGATGGCTCCTCCGTGCGTCTGGACCTTTGCCAAAGTGAAGGAGTTCAAAAGCAAGCTGGGCAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS GCA 72 bp TCCAAGTCCGCTGAAAGAACATCTATAGCCCCAGTGTaGTCAGACTGGATCATAACTGTGTCCTCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: SKSAERTSIAPV*SDWIITVSSGR
Trigger: GCGACCTGAGGACACAGTTATGATCCAGTCTGAGCACACTGGGGCTATAGATGTTCTTTCAGCGGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS CCA 72 bp GCTGAAAGAACATCTATAGCCCCAGTGTGCTCAGACTaGATCATAACTGTGTCCTCAGGTCGCTGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: AERTSIAPVCSD*IITVSSGRCGA
Trigger: AGCTCCACAGCGACCTGAGGACACAGTTATGATCCAGTCTGAGCACACTGGGGCTATAGATGTTCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7
CDS TCA 72 bp TCTTGTTGCGGAGCAAGGAGTAGGAGTTATCAAACTTaGGCAAGTAGATGCCCTCCCCAGGGTAATCATGGC +
Preference number: 6 (lower is better)
Translates to: SCCGARSRSYQT*ASRCPPQGNHG
Trigger: GCCATGATTACCCTGGGGAGGGCATCTACTTGCTCAAGTTTGATAACTCCTACTCCTTGCTCCGCAACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037418.7