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Pregenerated sensors for TMED6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031919

Ensembl transcript IDs: ENSMUST00000034393.7

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGGAAGAGTGGCTGGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTaGCTCTTAACAGAAGTCACGAGGCTCAGAACTACCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RKSGWSLEPCRGSVS*LLTEVTRLRTTSSA
Trigger: GGCTGAGCTGGTAGTTCTGAGCCTCGTGACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS TCA 90 bp GAAACCCTGCGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTaGCATCCCGAGAATGCGCTGAACCTCGTAGCTGAAGTAGAGGTA +
Preference number: 5 (lower is better)
Translates to: ETLRGMCRGNNVAVM*HPENALNLVAEVEV
Trigger: TACCTCTACTTCAGCTACGAGGTTCAGCGCATTCTCGGGATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 90 bp ACCACGATGGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTaGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTAACA +
Preference number: 5 (lower is better)
Translates to: TTMAKSFRSAPRKSG*SLEPCRGSVSWLLT
Trigger: TGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 90 bp CAGCAAATTGCCAGAAACATTCGATGGCTCCTGGAGAGACCACGATaGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: QQIARNIRWLLERPR*QSHSDQLHGRVAGP
Trigger: AGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS GCA 90 bp TTAATCTGGCCCCTTACATCCTGGGAAGTGTCAATAAGGAAACCCTaGGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTGACATC +
Preference number: 5 (lower is better)
Translates to: LIWPLTSWEVSIRKP*GVCAVATMWRSCDI
Trigger: GATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 90 bp GTATCCCATCTGGTCAGCAAATTGCCAGAAACATTCGATGGCTCCTaGAGAGACCACGATGGCAAAGTCATTCCGATCAGCTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: VSHLVSKLPETFDGS*RDHDGKVIPISSTE
Trigger: TTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 90 bp AAGCCTGTTTCTTGTGTAGCAAAGTTAATCTGGCCCCTTACATCCTaGGAAGTGTCAATAAGGAAACCCTGCGGGGTATGTGCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: KPVSCVAKLIWPLTS*EVSIRKPCGVCAVA
Trigger: TGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAACTTTGCTACACAAGAAACAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 72 bp GCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTaGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AKSFRSAPRKSG*SLEPCRGSVSW
Trigger: CCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS TCA 72 bp CGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTaGCATCCCGAGAATGCGCTGAACCTCGTAGCTGAA +
Preference number: 6 (lower is better)
Translates to: RGMCRGNNVAVM*HPENALNLVAE
Trigger: TTCAGCTACGAGGTTCAGCGCATTCTCGGGATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 72 bp GGCTGGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTaGCTCTTAACAGAAGTCACGAGGCTCAGAACTACC +
Preference number: 6 (lower is better)
Translates to: GWSLEPCRGSVS*LLTEVTRLRTT
Trigger: GGTAGTTCTGAGCCTCGTGACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 72 bp TCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCTaGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTA +
Preference number: 6 (lower is better)
Translates to: SFRSAPRKSGWS*EPCRGSVSWLL
Trigger: TAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS GCA 72 bp CCCCTTACATCCTGGGAAGTGTCAATAAGGAAACCCTaGGGGGTATGTGCCGTGGCAACAATGTGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: PLTSWEVSIRKP*GVCAVATMWRS
Trigger: TGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 90 bp ATGGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCTaGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTAACAGAAGTC +
Preference number: 6 (lower is better)
Translates to: MAKSFRSAPRKSGWS*EPCRGSVSWLLTEV
Trigger: GACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 90 bp TGTGCTGTCCTTAATCGCATCCAGAGTGTCGTTCAGTTGCTTCCTTaGACTCTGCTTGTGATCCACCTCGGGCCCCTCATAGAAGACTCC +
Preference number: 6 (lower is better)
Translates to: CAVLNRIQSVVQLLP*TLLVIHLGPLIEDS
Trigger: GGAGTCTTCTATGAGGGGCCCGAGGTGGATCACAAGCAGAGTCAAAGGAAGCAACTGAACGACACTCTGGATGCGATTAAGGACAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 72 bp CTGGTCAGCAAATTGCCAGAAACATTCGATGGCTCCTaGAGAGACCACGATGGCAAAGTCATTCCGATCAGC +
Preference number: 6 (lower is better)
Translates to: LVSKLPETFDGS*RDHDGKVIPIS
Trigger: GCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 72 bp CTTAATCGCATCCAGAGTGTCGTTCAGTTGCTTCCTTaGACTCTGCTTGTGATCCACCTCGGGCCCCTCATA +
Preference number: 6 (lower is better)
Translates to: LNRIQSVVQLLP*TLLVIHLGPLI
Trigger: TATGAGGGGCCCGAGGTGGATCACAAGCAGAGTCAAAGGAAGCAACTGAACGACACTCTGGATGCGATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 90 bp CTGAACCTCGTAGCTGAAGTAGAGGTATCCCATCTGGTCAGCAAATaGCCAGAAACATTCGATGGCTCCTGGAGAGACCACGATGGCAAA +
Preference number: 6 (lower is better)
Translates to: LNLVAEVEVSHLVSK*PETFDGSWRDHDGK
Trigger: TTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATACCTCTACTTCAGCTACGAGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 72 bp GTAGCTGAAGTAGAGGTATCCCATCTGGTCAGCAAATaGCCAGAAACATTCGATGGCTCCTGGAGAGACCAC +
Preference number: 6 (lower is better)
Translates to: VAEVEVSHLVSK*PETFDGSWRDH
Trigger: GTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATACCTCTACTTCAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 72 bp GAAGCGCCACATGTGGAAAACTTGGTTCTCCACCCTTaGTGTGCTGTCCTTAATCGCATCCAGAGTGTCGTT +
Preference number: 6 (lower is better)
Translates to: EAPHVENLVLHP*CAVLNRIQSVV
Trigger: AACGACACTCTGGATGCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 72 bp CCTGGCATAGTTGTAGAAGCGCCACATGTGGAAAACTaGGTTCTCCACCCTTTGTGTGCTGTCCTTAATCGC +
Preference number: 6 (lower is better)
Translates to: PGIVVEAPHVEN*VLHPLCAVLNR
Trigger: GCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CAA 90 bp TTTTCTCATCCTGGCATAGTTGTAGAAGCGCCACATGTGGAAAACTaGGTTCTCCACCCTTTGTGTGCTGTCCTTAATCGCATCCAGAGT +
Preference number: 6 (lower is better)
Translates to: FSHPGIVVEAPHVEN*VLHPLCAVLNRIQS
Trigger: ACTCTGGATGCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGGATGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 72 bp TCTTGTGTAGCAAAGTTAATCTGGCCCCTTACATCCTaGGAAGTGTCAATAAGGAAACCCTGCGGGGTATGT +
Preference number: 6 (lower is better)
Translates to: SCVAKLIWPLTS*EVSIRKPCGVC
Trigger: ACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAACTTTGCTACACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7
CDS CCA 72 bp ACTGCAGGAGGAAGAAGTCAGCCACTTTTCTCATCCTaGCATAGTTGTAGAAGCGCCACATGTGGAAAACTT +
Preference number: 6 (lower is better)
Translates to: TAGGRSQPLFSS*HSCRSATCGKL
Trigger: AAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGGATGAGAAAAGTGGCTGACTTCTTCCTCCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034393.7