Pregenerated sensors for TMED6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031919Ensembl transcript IDs: ENSMUST00000034393.7
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CGGAAGAGTGGCTGGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTaGCTCTTAACAGAAGTCACGAGGCTCAGAACTACCAGCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RKSGWSLEPCRGSVS*LLTEVTRLRTTSSA Trigger: GGCTGAGCTGGTAGTTCTGAGCCTCGTGACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS TCA 90 bp | GAAACCCTGCGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTaGCATCCCGAGAATGCGCTGAACCTCGTAGCTGAAGTAGAGGTA | + |
Preference number: 5 (lower is better) Translates to: ETLRGMCRGNNVAVM*HPENALNLVAEVEV Trigger: TACCTCTACTTCAGCTACGAGGTTCAGCGCATTCTCGGGATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 90 bp | ACCACGATGGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTaGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTAACA | + |
Preference number: 5 (lower is better) Translates to: TTMAKSFRSAPRKSG*SLEPCRGSVSWLLT Trigger: TGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 90 bp | CAGCAAATTGCCAGAAACATTCGATGGCTCCTGGAGAGACCACGATaGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCT | + |
Preference number: 5 (lower is better) Translates to: QQIARNIRWLLERPR*QSHSDQLHGRVAGP Trigger: AGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS GCA 90 bp | TTAATCTGGCCCCTTACATCCTGGGAAGTGTCAATAAGGAAACCCTaGGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTGACATC | + |
Preference number: 5 (lower is better) Translates to: LIWPLTSWEVSIRKP*GVCAVATMWRSCDI Trigger: GATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 90 bp | GTATCCCATCTGGTCAGCAAATTGCCAGAAACATTCGATGGCTCCTaGAGAGACCACGATGGCAAAGTCATTCCGATCAGCTCCACGGAA | + |
Preference number: 5 (lower is better) Translates to: VSHLVSKLPETFDGS*RDHDGKVIPISSTE Trigger: TTCCGTGGAGCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 90 bp | AAGCCTGTTTCTTGTGTAGCAAAGTTAATCTGGCCCCTTACATCCTaGGAAGTGTCAATAAGGAAACCCTGCGGGGTATGTGCCGTGGCA | + |
Preference number: 5 (lower is better) Translates to: KPVSCVAKLIWPLTS*EVSIRKPCGVCAVA Trigger: TGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAACTTTGCTACACAAGAAACAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 72 bp | GCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTaGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTGG | + |
Preference number: 6 (lower is better) Translates to: AKSFRSAPRKSG*SLEPCRGSVSW Trigger: CCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS TCA 72 bp | CGGGGTATGTGCCGTGGCAACAATGTGGCGGTCATGTaGCATCCCGAGAATGCGCTGAACCTCGTAGCTGAA | + |
Preference number: 6 (lower is better) Translates to: RGMCRGNNVAVM*HPENALNLVAE Trigger: TTCAGCTACGAGGTTCAGCGCATTCTCGGGATGTCACATGACCGCCACATTGTTGCCACGGCACATACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 72 bp | GGCTGGTCCTTGGAGCCGTGTAGGGGATCTGTCTCCTaGCTCTTAACAGAAGTCACGAGGCTCAGAACTACC | + |
Preference number: 6 (lower is better) Translates to: GWSLEPCRGSVS*LLTEVTRLRTT Trigger: GGTAGTTCTGAGCCTCGTGACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 72 bp | TCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCTaGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTA | + |
Preference number: 6 (lower is better) Translates to: SFRSAPRKSGWS*EPCRGSVSWLL Trigger: TAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS GCA 72 bp | CCCCTTACATCCTGGGAAGTGTCAATAAGGAAACCCTaGGGGGTATGTGCCGTGGCAACAATGTGGCGGTCA | + |
Preference number: 6 (lower is better) Translates to: PLTSWEVSIRKP*GVCAVATMWRS Trigger: TGACCGCCACATTGTTGCCACGGCACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 90 bp | ATGGCAAAGTCATTCCGATCAGCTCCACGGAAGAGTGGCTGGTCCTaGGAGCCGTGTAGGGGATCTGTCTCCTGGCTCTTAACAGAAGTC | + |
Preference number: 6 (lower is better) Translates to: MAKSFRSAPRKSGWS*EPCRGSVSWLLTEV Trigger: GACTTCTGTTAAGAGCCAGGAGACAGATCCCCTACACGGCTCCAAGGACCAGCCACTCTTCCGTGGAGCTGATCGGAATGACTTTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 90 bp | TGTGCTGTCCTTAATCGCATCCAGAGTGTCGTTCAGTTGCTTCCTTaGACTCTGCTTGTGATCCACCTCGGGCCCCTCATAGAAGACTCC | + |
Preference number: 6 (lower is better) Translates to: CAVLNRIQSVVQLLP*TLLVIHLGPLIEDS Trigger: GGAGTCTTCTATGAGGGGCCCGAGGTGGATCACAAGCAGAGTCAAAGGAAGCAACTGAACGACACTCTGGATGCGATTAAGGACAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 72 bp | CTGGTCAGCAAATTGCCAGAAACATTCGATGGCTCCTaGAGAGACCACGATGGCAAAGTCATTCCGATCAGC | + |
Preference number: 6 (lower is better) Translates to: LVSKLPETFDGS*RDHDGKVIPIS Trigger: GCTGATCGGAATGACTTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 72 bp | CTTAATCGCATCCAGAGTGTCGTTCAGTTGCTTCCTTaGACTCTGCTTGTGATCCACCTCGGGCCCCTCATA | + |
Preference number: 6 (lower is better) Translates to: LNRIQSVVQLLP*TLLVIHLGPLI Trigger: TATGAGGGGCCCGAGGTGGATCACAAGCAGAGTCAAAGGAAGCAACTGAACGACACTCTGGATGCGATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 90 bp | CTGAACCTCGTAGCTGAAGTAGAGGTATCCCATCTGGTCAGCAAATaGCCAGAAACATTCGATGGCTCCTGGAGAGACCACGATGGCAAA | + |
Preference number: 6 (lower is better) Translates to: LNLVAEVEVSHLVSK*PETFDGSWRDHDGK Trigger: TTTGCCATCGTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATACCTCTACTTCAGCTACGAGGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 72 bp | GTAGCTGAAGTAGAGGTATCCCATCTGGTCAGCAAATaGCCAGAAACATTCGATGGCTCCTGGAGAGACCAC | + |
Preference number: 6 (lower is better) Translates to: VAEVEVSHLVSK*PETFDGSWRDH Trigger: GTGGTCTCTCCAGGAGCCATCGAATGTTTCTGGCAATTTGCTGACCAGATGGGATACCTCTACTTCAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 72 bp | GAAGCGCCACATGTGGAAAACTTGGTTCTCCACCCTTaGTGTGCTGTCCTTAATCGCATCCAGAGTGTCGTT | + |
Preference number: 6 (lower is better) Translates to: EAPHVENLVLHP*CAVLNRIQSVV Trigger: AACGACACTCTGGATGCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 72 bp | CCTGGCATAGTTGTAGAAGCGCCACATGTGGAAAACTaGGTTCTCCACCCTTTGTGTGCTGTCCTTAATCGC | + |
Preference number: 6 (lower is better) Translates to: PGIVVEAPHVEN*VLHPLCAVLNR Trigger: GCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CAA 90 bp | TTTTCTCATCCTGGCATAGTTGTAGAAGCGCCACATGTGGAAAACTaGGTTCTCCACCCTTTGTGTGCTGTCCTTAATCGCATCCAGAGT | + |
Preference number: 6 (lower is better) Translates to: FSHPGIVVEAPHVEN*VLHPLCAVLNRIQS Trigger: ACTCTGGATGCGATTAAGGACAGCACACAAAGGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGGATGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 72 bp | TCTTGTGTAGCAAAGTTAATCTGGCCCCTTACATCCTaGGAAGTGTCAATAAGGAAACCCTGCGGGGTATGT | + |
Preference number: 6 (lower is better) Translates to: SCVAKLIWPLTS*EVSIRKPCGVC Trigger: ACATACCCCGCAGGGTTTCCTTATTGACACTTCCCAGGATGTAAGGGGCCAGATTAACTTTGCTACACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |
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CDS CCA 72 bp | ACTGCAGGAGGAAGAAGTCAGCCACTTTTCTCATCCTaGCATAGTTGTAGAAGCGCCACATGTGGAAAACTT | + |
Preference number: 6 (lower is better) Translates to: TAGGRSQPLFSS*HSCRSATCGKL Trigger: AAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGGATGAGAAAAGTGGCTGACTTCTTCCTCCTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034393.7 |