Pregenerated sensors for TMED5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063406Ensembl transcript IDs: ENSMUST00000002837.11, ENSMUST00000061203.13, ENSMUST00000117759.2, ENSMUST00000118036.8, ENSMUST00000119437.8, ENSMUST00000119784.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACTCCTGCTTCCTGGGCCTGGCATTCTCCTGTACTGGGGCATATaGTCTGCGAAATACCAAGGGGCTTCTCTTCCTAGTGATGGCCGA | + |
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Preference number: 1 (lower is better) Translates to: PLLLPGPGILLYWGI*SAKYQGASLPSDGR Trigger: TCGGCCATCACTAGGAAGAGAAGCCCCTTGGTATTTCGCAGATCATATGCCCCAGTACAGGAGAATGCCAGGCCCAGGAAGCAGGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR TCA 90 bp | GCTACCTCCAAATGGGCATGTCTTAGTTGGCAGGAAGAGGGCGAATaGGTGGAACAGGGCCATAGGAATGCAGGTGTGGTTAGTGCGAAG | + |
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Preference number: 1 (lower is better) Translates to: ATSKWACLSWQEEGE*VEQGHRNAGVVSAK Trigger: CTTCGCACTAACCACACCTGCATTCCTATGGCCCTGTTCCACTCATTCGCCCTCTTCCTGCCAACTAAGACATGCCCATTTGGAGGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR TCA 90 bp | TCCCCAGAGACCACGTGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCCCTCTTCAAGTGTGTCTGAAGACAGCTACAGTGTACCCA | + |
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Preference number: 1 (lower is better) Translates to: SPETTWWLTTICNGI*CPLQVCLKTATVYP Trigger: TGGGTACACTGTAGCTGTCTTCAGACACACTTGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCACGTGGTCTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR TCA 90 bp | AGCATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTGACGCTTaGTGGGAAGGTGCAGTATCTTGTGGAATGGGAAGGAGCGACTGC | + |
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Preference number: 1 (lower is better) Translates to: SMWRKIQSFGSSGDA*WEGAVSCGMGRSDC Trigger: GCAGTCGCTCCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR GCA 90 bp | AAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTaGGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTC | + |
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Preference number: 1 (lower is better) Translates to: KELAQEDHGLLQYHI*GEEEVAFHEEHSRL Trigger: GAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR TCA 90 bp | GCCCACTATCAAAGCCCGTGCAAAATCATACAGCTATGGACGTGCTaGCGTCCTGGTCCTCTCTTCCTTTCACTAGAGTCAGCTAAACAG | + |
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Preference number: 1 (lower is better) Translates to: AHYQSPCKIIQLWTC*RPGPLFLSLESAKQ Trigger: CTGTTTAGCTGACTCTAGTGAAAGGAAGAGAGGACCAGGACGTCAGCACGTCCATAGCTGTATGATTTTGCACGGGCTTTGATAGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR CCA 90 bp | TTCCCAGCAACCACATGGTGGCTCACAACCATCCCTAACAAGATCTaGCGTCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: FPATTWWLTTIPNKI*RPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGACGCCAGATCTTGTTAGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR CCA 90 bp | CCTGGTCCTCTCTTCCTTTCACTAGAGTCAGCTAAACAGACTCAATaGAGATACCTGGGCATGGTGGCATGCACCTGTCATACTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: PGPLFLSLESAKQTQ*RYLGMVACTCHTST Trigger: AGTGCTAGTATGACAGGTGCATGCCACCATGCCCAGGTATCTCCATTGAGTCTGTTTAGCTGACTCTAGTGAAAGGAAGAGAGGACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR CCA 90 bp | GCTTTGCTTTCAAAGGTGCTTTTTGGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTTCTTTCAGAGGTCCCGAGTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: ALLSKVLFGAGEMAQ*LRALTASFRGPEFN Trigger: ATTGAACTCGGGACCTCTGAAAGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAAAAAGCACCTTTGAAAGCAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR CCA 90 bp | CCTAGATTATCAGACTCTAGAAAAAGAACTCGCACAGGAAGATCATaGCCTGCTGCAATACCACATTTGCGGAGAAGAAGAGGTCGCCTT | + |
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Preference number: 1 (lower is better) Translates to: PRLSDSRKRTRTGRS*PAAIPHLRRRRGRL Trigger: AAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTCTAGAGTCTGATAATCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR TCA 90 bp | TTATGTCATCCAGGCAGCTTCAATGTAATTACACAGAGTCTGGAGTaGTACAAGAGGCACAAGCCATGGATTGACAGCAACACCTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: LCHPGSFNVITQSLE*YKRHKPWIDSNTCK Trigger: CTTACAGGTGTTGCTGTCAATCCATGGCTTGTGCCTCTTGTATCACTCCAGACTCTGTGTAATTACATTGAAGCTGCCTGGATGACATAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR CCA 90 bp | ATGTTTCGATCTCGAGCTTCAAATGCTCTAAGTAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTGGACTTGATGCTGTTGATGGATTCC | + |
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Preference number: 1 (lower is better) Translates to: MFRSRASNALSRVCM*PLLLSLDLMLLMDS Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGAAGCTCGAGATCGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR TCA 90 bp | ATATTTTATTTATATGAGTACACTGTAGCTGTCTTCAGACACACCTaGAGAGAGCATCGGATCCCATTACAGATGGTTGTGAGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: IFYLYEYTVAVFRHT*REHRIPLQMVVSHH Trigger: ATGGTGGCTCACAACCATCTGTAATGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGACAGCTACAGTGTACTCATATAAATAAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR CCA 90 bp | ACTGTAGTGACAGACAGACAAAGTGGAAATGAGTACATCTTAATTTaGAAAAACGGCCCACTATCAAAGCCCGTGCAAAATCATACAGCT | + |
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Preference number: 1 (lower is better) Translates to: TVVTDRQSGNEYILI*KNGPLSKPVQNHTA Trigger: AGCTGTATGATTTTGCACGGGCTTTGATAGTGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCCACTTTGTCTGTCTGTCACTACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR TCA 90 bp | CTGTATCCAAGATGCTATGGTGTATGTTCACACACATTCATAACCTaGCCATCTAAACCTGACTTGGAGGAAATGTTAATTTGTTACTTC | + |
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Preference number: 1 (lower is better) Translates to: LYPRCYGVCSHTFIT*PSKPDLEEMLICYF Trigger: GAAGTAACAAATTAACATTTCCTCCAAGTCAGGTTTAGATGGTCAGGTTATGAATGTGTGTGAACATACACCATAGCATCTTGGATACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR TCA 90 bp | CACAAGCCATGGATTGACAGCAACACCTGTAAGACTTTAGACCTGTaGAATTCACTTCAGATTTGTGAGACAATAAATCCATTTTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: HKPWIDSNTCKTLDL*NSLQICETINPFCC Trigger: ACAACAAAATGGATTTATTGTCTCACAAATCTGAAGTGAATTTCACAGGTCTAAAGTCTTACAGGTGTTGCTGTCAATCCATGGCTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTCTGAGGCCAGCTTGGTCGTGGTGGTACATGGATaGAAAAGATGTCAACCACCC | + |
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Preference number: 2 (lower is better) Translates to: QLSGGRGRRISESEASLVVVVHG*KRCQPP Trigger: GGGTGGTTGACATCTTTTGCATCCATGTACCACCAC...GACCAAGCTGGCCTCAGACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTCTGAGGCCAGCTTGGTCGGCAGTGGTGGTACATaGATGCAAAAGATGTCAACC | + |
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Preference number: 2 (lower is better) Translates to: QLSGGRGRRISESEASLVGSGGT*MQKMST Trigger: GGTTGACATCTTTTGCATCCATGTACCACCACTGCC...GACCAAGCTGGCCTCAGACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR-3UTR TCA 90 bp | CCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGTCGTCGGGTGACGCTTaGTGGGAAGGTGCAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: PHLRRRRGRLPRRALQTQSSGDA*WEGAVS Trigger: AGATACTGCACCTTCCCATCAAGCGTCACCCGACGA...CTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR-3UTR GCA 90 bp | CATACAGCTATGGACGTGCTGACGTCCTGGTCCTCTCTTCCTTTCACTAGAGTCGCTGCATTCCAAGCCTaGCTGTCCCACCCCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: HTAMDVLTSWSSLPFTRVAAFQA*LSHPQC Trigger: ACACTGGGGGTGGGACAGGCAGGCTTGGAATGCAGC...GACTCTAGTGAAAGGAAGAGAGGACCAGGACGTCAGCACGTCCATAGCTGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR CAA 90 bp | GTAGCTGTGGCTGTCCTAGAAGTTGCTCTGTGGGCTAGGCTGGACTaGAACTCAGACAGATCTGCTTGCCTCTGCCTCCTGAATGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VAVAVLEVALWARLD*NSDRSACLCLLNAG Trigger: TCCAGCATTCAGGAGGCAGAGGCAAGCAGATCTGTCTGAGTTCAAGTCCAGCCTAGCCCACAGAGCAACTTCTAGGACAGCCACAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTTTTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTTCTGTGGGGCTGGGCTGGTaGGATGGCTCAACAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: VLFGAGEMAQWLRALTASVGLGW*DGSTDK Trigger: CTTATCTGTTGAGCCATCTCACCAGCCCAGCCCCAC...AGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAAAAAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR CAA 90 bp | AAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTaGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: KRTRTGRSWPAAIPH*RRRRGRLPRRALQT Trigger: AGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAACTCAGAAGTTGTGAAAATGGGAAGGAGCGACTaGATCCTGACTGTAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: RGRLPRRALQTQNSEVVKMGRSD*ILTVGL Trigger: CAGTCCTACAGTCAGGATGCAGTCGCTCCTTCCCAT...TTTCACAACTTCTGAGTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR CAA 90 bp | TTTGGTGCCGCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTaGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAGTATCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FGAAGRIACGEKYRV*ARRVTLDGKVQYLV Trigger: CACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGCGGCACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGACTGCTTCTTTCAGAGGTCCCGAGTTCAATCCCCAGAGACCACGTGGCACACATTCATAACCTaGCCATCTAAACCTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: STDCFFQRSRVQSPETTWHTFIT*PSKPDL Trigger: CAAGTCAGGTTTAGATGGTCAGGTTATGAATGTGTG...CCACGTGGTCTCTGGGGATTGAACTCGGGACCTCTGAAAGAAGCAGTCAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR-3UTR GCA 90 bp | CATACAGCTATGGACGTGCTGACGTCCTGGTCCTCTCTTCCTTTCACTAGAGTCAGGTTAAAGAACTGCTaGATTCCAAGCCTGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: HTAMDVLTSWSSLPFTRVRLKNC*IPSLPV Trigger: GACAGGCAGGCTTGGAATGCAGCAGTTCTTTAACCT...GACTCTAGTGAAAGGAAGAGAGGACCAGGACGTCAGCACGTCCATAGCTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTCTTCAGACACACCTGAAGAGAGCATCGGATCCCATTACAGATGGTTGTACACAGAGTCTGGAGTaGTACAAGAGGCACAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SCLQTHLKRASDPITDGCTQSLE*YKRHKP Trigger: TGGCTTGTGCCTCTTGTATCACTCCAGACTCTGTGT...ACAACCATCTGTAATGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCAAGTGTGTCAGGTTAGGGCAGTGGTaGTACATGGATGCAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RGGSQPSVMGSDALFKCVRLGQW*YMDAKD Trigger: ATCTTTTGCATCCATGTACCACCACTGCCCTAACCT...GACACACTTGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR CAA 90 bp | ACTCAGGAGGCAGAGGCAGGTGGTTCTCTGAGTTTGAGTCCAGTTTaGTTTACCACCAAACCTGATAACCTAAATTCAATCCCTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: TQEAEAGGSLSLSPV*FTTKPDNLNSIPGT Trigger: GGTCCCAGGGATTGAATTTAGGTTATCAGGTTTGGTGGTAAACAAAACTGGACTCAAACTCAGAGAACCACCTGCCTCTGCCTCCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTCTTCAGACACACCTGAAGAGAGCATCGGATCCCATTACAGATGGTTGTAAGAGGCACAAGCCATaGATTGACAGCAACACCTGT | + |
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Preference number: 2 (lower is better) Translates to: SCLQTHLKRASDPITDGCKRHKP*IDSNTC Trigger: ACAGGTGTTGCTGTCAATCCATGGCTTGTGCCTCTT...ACAACCATCTGTAATGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTACATGGATGCAAAAGATGTCAACCACCCTTTGTCCCACTTTTAAATCACTTCCCAGCAACCACATaGTGGCTCACAACCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: VVHGCKRCQPPFVPLLNHFPATT*WLTTIP Trigger: AGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA...GTGATTTAAAAGTGGGACAAAGGGTGGTTGACATCTTTTGCATCCATGTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGGAAATGAGTACATCTTAATTTGGAAAAACGGCCCACTATCAAAGCCCGTGCTCAATGGAGATACCTaGGCATGGTGGCATGCACCT | + |
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Preference number: 2 (lower is better) Translates to: SGNEYILIWKNGPLSKPVLNGDT*AWWHAP Trigger: AGGTGCATGCCACCATGCCCAGGTATCTCCATTGAG...CACGGGCTTTGATAGTGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTCCATCACTAGTTATTTTGGTGCCGCAGGTAGAATAGCATGTGGCGAACAGTATCTTGTGGAATaGGAAGGAGCGACTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: KNSITSYFGAAGRIACGEQYLVE*EGATAS Trigger: GGATGCAGTCGCTCCTTCCCATTCCACAAGATACTG...TTCGCCACATGCTATTCTACCTGCGGCACCAAAATAACTAGTGATGGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR CAA 90 bp | GCTGACACCACCACCATGACCATCAAGTTAACCACAGACCAGAAATaGACTCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ADTTTMTIKLTTDQK*TLSKLLSCMFRSRA Trigger: AGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGAGTCAATTTCTGGTCTGTGGTTAACTTGATGGTCATGGTGGTGGTGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAGGTCTTCAGACACACCTaGAGAGAGCATCGGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVKVAFLYVSISSFKCSKVFRHT*REHRIP Trigger: TGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGAC...CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGTTCCTCCCAAGGGCCTaGGAAAGAGGAAACTATATT | + |
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Preference number: 2 (lower is better) Translates to: QYQLYLRGRILSHSLSEEFLPRA*ERGNYI Trigger: AATATAGTTTCCTCTTTCTCAGGCCCTTGGGAGGAA...CTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCGAGCCACCATGTGGTTaGTGGGAATTGGAACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SYDKYNFFWGILDYPPLIEPPCG*WELELR Trigger: CCTGAGTTCCAATTCCCAGCAACCACATGGTGGCTC...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATTTCAATACCCAGATCTaGCTATTGACTATCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: GRILSHSLSEETQWTLLYFNTQI*LLTIST Trigger: AGTAGAGATAGTCAATAGTCAGATCTGGGTATTGAA...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTGTGGAAAACATTACCCAAGTGAAAAAGATCTTAGCAGATGTGTTCTTTAGGAAGATCATGGCCTaGTGCAATACCACATTTGCG | + |
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Preference number: 2 (lower is better) Translates to: TFVENITQVKKILADVFFRKIMA*CNTTFA Trigger: CGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCT...AAAGAACACATCTGCTAAGATCTTTTTCACTTGGGTAATGTTTTCCACAAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATCAGTTAGGATAGCTCTAGGGCATTTTTCTTaGTCAGTTATTGATCACATA | + |
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Preference number: 2 (lower is better) Translates to: SQSFRRDAVDSALSVRIALGHFS*SVIDHI Trigger: TATGTGATCAATAACTGACCAAGAAAAATGCCCTAG...AGCTATCCTAACTGATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR-3UTR TCA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCACCCAGATCTGACTATTaGCTATCTCTACTTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: TVQYQLYLRGRILSHSLSPRSDY*LSLLDN Trigger: ATTGTCAAGTAGAGATAGTCAATAGTCAGATCTGGG...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR-3UTR CCA 90 bp | CGATCTCGAGCTTCAAATGCTCTAAGTAGAGTTTGTATGTGGCCACTTTTGCTTGTAAAAGCAAACTGGTaGCATGTTTATGAACATTGT | + |
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Preference number: 2 (lower is better) Translates to: RSRASNALSRVCMWPLLLVKANW*HVYEHC Trigger: ACAATGTTCATAAACATGCCACCAGTTTGCTTTTAC...AAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGAAGCTCGAGATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR CCA 90 bp | CGATCTCGAGCTTCAAATGCTCTAAGTAGAGTTTGTATGTGGCCACTTTTGCTTCATATAGTAAAACACTaGATGCTGGATTGTCATTAC | + |
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Preference number: 2 (lower is better) Translates to: RSRASNALSRVCMWPLLLHIVKH*MLDCHY Trigger: GTAATGACAATCCAGCATCCAGTGTTTTACTATATG...AAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGAAGCTCGAGATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGTAAAAGCAAACTGGTaGCATGTTTATGAACATTGT | + |
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Preference number: 2 (lower is better) Translates to: TVQYQLYLRGRILSHSLSVKANW*HVYEHC Trigger: ACAATGTTCATAAACATGCCACCAGTTTGCTTTTAC...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGATCTTTATTATAATTaGGTTAGCAAGAAGAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TVQYQLYLRGRILSHSLSDLYYN*VSKKSP Trigger: TGGGCTCTTCTTGCTAACCCAATTATAATAAAGATC...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR-3UTR CCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCATGTGTATGTTTATATaGGTTCAATACCCAGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SYDKYNFFWGILDYPPLIMCMFI*VQYPDL Trigger: CAGATCTGGGTATTGAACCCATATAAACATACACAT...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTaGTTCTTTCAGAGGTCCCGAGTTCAATCCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSVVKSTD*FFQRSRVQSPE Trigger: CTCTGGGGATTGAACTCGGGACCTCTGAAAGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR CCA 72 bp | GCGAATGAGTGGAACAGGGCCATAGGAATGCAGGTGTaGTTAGTGCGAAGGTTAGGGCAGTGGTGGTACATG | + |
|
Preference number: 3 (lower is better) Translates to: ANEWNRAIGMQV*LVRRLGQWWYM Trigger: CATGTACCACCACTGCCCTAACCTTCGCACTAACCACACCTGCATTCCTATGGCCCTGTTCCACTCATTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR CCA 72 bp | GGGCATGTCTTAGTTGGCAGGAAGAGGGCGAATGAGTaGAACAGGGCCATAGGAATGCAGGTGTGGTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHVLVGRKRANE*NRAIGMQVWLV Trigger: CACTAACCACACCTGCATTCCTATGGCCCTGTTCCACTCATTCGCCCTCTTCCTGCCAACTAAGACATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR-3UTR CAA 90 bp | CACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAGGAAGGTGCAGTATCTaGTGGAATGGGAAGGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: HICGEEEVAFHEEHSRLRGRCSI*WNGKER Trigger: TCGCTCCTTCCCATTCCACAAGATACTGCACCTTCC...TCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR TCA 72 bp | CTTCCTGGGCCTGGCATTCTCCTGTACTGGGGCATATaGTCTGCGAAATACCAAGGGGCTTCTCTTCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPGPGILLYWGI*SAKYQGASLPS Trigger: ACTAGGAAGAGAAGCCCCTTGGTATTTCGCAGATCATATGCCCCAGTACAGGAGAATGCCAGGCCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCATGTGGTTGCTGGGAATTGGAACTCAGGATTCTGAAAGAGCAGTCAGTCTCAGACAGATCTGCTaGCCTCTGCCTCCTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ATMWLLGIGTQDSERAVSLRQIC*PLPPEC Trigger: GCATTCAGGAGGCAGAGGCAAGCAGATCTGTCTGAG...ACTGACTGCTCTTTCAGAATCCTGAGTTCCAATTCCCAGCAACCACATGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR TCA 72 bp | AAATGGGCATGTCTTAGTTGGCAGGAAGAGGGCGAATaGGTGGAACAGGGCCATAGGAATGCAGGTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KWACLSWQEEGE*VEQGHRNAGVV Trigger: AACCACACCTGCATTCCTATGGCCCTGTTCCACTCATTCGCCCTCTTCCTGCCAACTAAGACATGCCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR GCA 72 bp | ATACTAGCACTTAGGAGTCCAAGGTTAAAGAACTGCTaGATTCCAAGCCTGCCTGTCCCACCCCCAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILALRSPRLKNC*IPSLPVPPPVS Trigger: AGACACTGGGGGTGGGACAGGCAGGCTTGGAATGCAGCAGTTCTTTAACCTTGGACTCCTAAGTGCTAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR CCA 72 bp | TCAAAGGTGCTTTTTGGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTTCTTTCAGAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SKVLFGAGEMAQ*LRALTASFRGP Trigger: GGGACCTCTGAAAGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAAAAAGCACCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR TCA 72 bp | CGAAAAATACAGAGTTTTGGCTCGTCGGGTGACGCTTaGTGGGAAGGTGCAGTATCTTGTGGAATGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RKIQSFGSSGDA*WEGAVSCGMGR Trigger: CCTTCCCATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR TCA 72 bp | CAAAGCCCGTGCAAAATCATACAGCTATGGACGTGCTaGCGTCCTGGTCCTCTCTTCCTTTCACTAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPCKIIQLWTC*RPGPLFLSLES Trigger: TGACTCTAGTGAAAGGAAGAGAGGACCAGGACGTCAGCACGTCCATAGCTGTATGATTTTGCACGGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR CCA 72 bp | TTCTATGTAGCTGTGGCTGTCCTAGAAGTTGCTCTGTaGGCTAGGCTGGACTTGAACTCAGACAGATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FYVAVAVLEVAL*ARLDLNSDRSA Trigger: AGCAGATCTGTCTGAGTTCAAGTCCAGCCTAGCCCACAGAGCAACTTCTAGGACAGCCACAGCTACATAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR CCA 72 bp | CAGCTAAACAGACTCAATGGAGATACCTGGGCATGGTaGCATGCACCTGTCATACTAGCACTTAGGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLNRLNGDTWAW*HAPVILALRSP Trigger: TGGACTCCTAAGTGCTAGTATGACAGGTGCATGCCACCATGCCCAGGTATCTCCATTGAGTCTGTTTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTGACTGCTTCTTTCAGAGGTCCCGAGTTCAATCCCCAGAGACCACGTGGGGAGGAAATGTTAATTaGTTACTTCTCTGCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: STDCFFQRSRVQSPETTWGGNVN*LLLCYL Trigger: GAGGTAGCAGAGAAGTAACAAATTAACATTTCCTCC...CCACGTGGTCTCTGGGGATTGAACTCGGGACCTCTGAAAGAAGCAGTCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR TCA 72 bp | GGATTTCTGAGTCTGAGGCCAGCTTGGTCTAAAAAGTaGGTTCCAGGACAACCAGGGCTATACAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GFLSLRPAWSKK*VPGQPGLYRET Trigger: GGTTTCTCTGTATAGCCCTGGTTGTCCTGGAACTCACTTTTTAGACCAAGCTGGCCTCAGACTCAGAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR TCA 72 bp | CATGTGGCGAAAAATACAGAGTTTTGGCTCGTCGGGTaGCGCTTGATGGGAAGGTGCAGTATCTTGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HVAKNTEFWLVG*RLMGRCSILWN Trigger: ATTCCACAAGATACTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR CCA 72 bp | TACTGGTTAGCTCTAGTTCAGGTGTTCCAATTCTACTaGCTTGTGGAGGCACCAGGCAGTCATAGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YWLALVQVFQFY*LVEAPGSHSAH Trigger: ATGTGCACTATGACTGCCTGGTGCCTCCACAAGCCAGTAGAATTGGAACACCTGAACTAGAGCTAACCAGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR CCA 72 bp | AGTCAGCTAAACAGACTCAATGGAGATACCTGGGCATaGTGGCATGCACCTGTCATACTAGCACTTAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQLNRLNGDTWA*WHAPVILALRS Trigger: ACTCCTAAGTGCTAGTATGACAGGTGCATGCCACCATGCCCAGGTATCTCCATTGAGTCTGTTTAGCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR CCA 72 bp | CTCTTCCTTTCACTAGAGTCAGCTAAACAGACTCAATaGAGATACCTGGGCATGGTGGCATGCACCTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LFLSLESAKQTQ*RYLGMVACTCH Trigger: ATGACAGGTGCATGCCACCATGCCCAGGTATCTCCATTGAGTCTGTTTAGCTGACTCTAGTGAAAGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGAACTCAGAAGTTGTGAAATTAGCAGATCAGGAGTaGCAGCTCAATCACCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGRLPRRALQTQNSEVVKLADQE*QLNHLK Trigger: TTTCAGGTGATTGAGCTGCAACTCCTGATCTGCTAA...TTTCACAACTTCTGAGTTCTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR TCA 72 bp | CCAGGCAGCTTCAATGTAATTACACAGAGTCTGGAGTaGTACAAGAGGCACAAGCCATGGATTGACAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSFNVITQSLE*YKRHKPWIDSN Trigger: GTTGCTGTCAATCCATGGCTTGTGCCTCTTGTATCACTCCAGACTCTGTGTAATTACATTGAAGCTGCCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTTTTTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTTCTTCCAGAGGAGGGGTTTaGTTTTTCTTTAAATCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLFGAGEMAQWLRALTASSRGGV*FFFKSK Trigger: CTTTGATTTAAAGAAAAACAAAACCCCTCCTCTGGA...AGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAAAAAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| 3UTR TCA 72 bp | TTATATGAGTACACTGTAGCTGTCTTCAGACACACCTaGAGAGAGCATCGGATCCCATTACAGATGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYEYTVAVFRHT*REHRIPLQMVV Trigger: CACAACCATCTGTAATGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGACAGCTACAGTGTACTCATATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCTACCCTAGATTATCAGACTCTAGAAAAAGAACTCGCACAGGAAGATCAGAAAAATACAGAGTTTaGGCTCGTCGGGTGACGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FPYPRLSDSRKRTRTGRSEKYRV*ARRVTL Trigger: AAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTC...TGATCTTCCTGTGCGAGTTCTTTTTCTAGAGTCTGATAATCTAGGGTAGGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGTCTTCAGACACACCTGAAGAGAGCATCGGATCCCATTACAGATGGTTGTAAAATACAGCTAAGATaGCTTAGTTCAATCCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCLQTHLKRASDPITDGCKIQLR*LSSIPD Trigger: GTCAGGGATTGAACTAAGCAATCTTAGCTGTATTTT...ACAACCATCTGTAATGGGATCCGATGCTCTCTTCAGGTGTGTCTGAAGACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATGGAAACTTCTTTAACTaGTACCTGCCACATATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRILSHSLSEETQWTLLYGNFFN*YLPHIQ Trigger: CTGTATATGTGGCAGGTACAAGTTAAAGAAGTTTCC...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATTATTTATCTCACATTTaGAAAAGCCTCTGGATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GRILSHSLSEETQWTLLYYLSHI*KSLWIG Trigger: CCCTATCCAGAGGCTTTTCAAAATGTGAGATAAATA...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAATCTATTGTAGGAGCTaGGTTAGAAGCCTAGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVQYQLYLRGRILSHSLSIYCRS*VRSLGH Trigger: ATGCCCTAGGCTTCTAACCAAGCTCCTACAATAGAT...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAGTGTGGTTGCTGGGAATaGGAACTCAGGATTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVKVAFLYVSISSFKCSKCGCWE*ELRILK Trigger: TTTCAGAATCCTGAGTTCCAATTCCCAGCAACCACA...CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCAAGGGCAGGTATGACTaGTATCATCTAAAGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYDKYNFFWGILDYPPLIKGRYD*YHLKSP Trigger: GGGGCTCTTTAGATGATACAAGTCATACCTGCCCTT...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR CCA 72 bp | ACAGACAGACAAAGTGGAAATGAGTACATCTTAATTTaGAAAAACGGCCCACTATCAAAGCCCGTGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TDRQSGNEYILI*KNGPLSKPVQN Trigger: ATTTTGCACGGGCTTTGATAGTGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCCACTTTGTCTGTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAGGGAAACTTCTTTAACTaGTACCTGCCACATATACAG | + |
|
Preference number: 3 (lower is better) Translates to: SVKVAFLYVSISSFKCSKGNFFN*YLPHIQ Trigger: CTGTATATGTGGCAGGTACAAGTTAAAGAAGTTTCC...CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCACAAGATCAAAGTATTaGAGTAGCATAGCACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SYDKYNFFWGILDYPPLITRSKY*SSIAQG Trigger: GCCCTGTGCTATGCTACTCAAATACTTTGATCTTGT...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR TCA 72 bp | AGATGCTATGGTGTATGTTCACACACATTCATAACCTaGCCATCTAAACCTGACTTGGAGGAAATGTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: RCYGVCSHTFIT*PSKPDLEEMLI Trigger: AATTAACATTTCCTCCAAGTCAGGTTTAGATGGTCAGGTTATGAATGTGTGTGAACATACACCATAGCATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| CDS-3UTR CCA 90 bp | CTTCTGAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATGAGCAGCACGGGGAATaGCAGCCACATCCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKVLSSIPSNHMVAHNHEQHGE*QPHPAA Trigger: GGCGGCAGGATGTGGCTGCCATTCCCCGTGCTGCTC...ATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| CDS-3UTR CCA 90 bp | AAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTGCGGAGAAGAGCAGCACGGGGAATaGCAGCCACATCCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KELAQEDHGLLQYHICGEEQHGE*QPHPAA Trigger: GGCGGCAGGATGTGGCTGCCATTCCCCGTGCTGCTC...TTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR CAA 72 bp | CGCACAGGAAGATCATGGCCTGCTGCAATACCACATTaGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGRSWPAAIPH*RRRRGRLPRRA Trigger: TGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCCAATTCTACTGGCTTGTGGAGGCACCAGGCAGTCATAGTGCACATGCATTCGATCTCCAACGATaGCTTCAGGGGCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFQFYWLVEAPGSHSAHAFDLQR*LQGHGL Trigger: CAGCCCATGCCCCTGAAGGCATCGTTGGAGATCGAA...TGCATGTGCACTATGACTGCCTGGTGCCTCCACAAGCCAGTAGAATTGGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| CDS-3UTR GCA 90 bp | GCCACCATGTGGTTGCTGGGAATTGGAACTCAGGATTCTGAAAGAGCAGTCAGTTTCGATCTCCAACGATaGCTTCAGGGGCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATMWLLGIGTQDSERAVSFDLQR*LQGHGL Trigger: CAGCCCATGCCCCTGAAGGCATCGTTGGAGATCGAA...ACTGACTGCTCTTTCAGAATCCTGAGTTCCAATTCCCAGCAACCACATGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| CDS-3UTR GCA 90 bp | AACAGACTCAATGGAGATACCTGGGCATGGTGGCATGCACCTGTCATACTAGCATTCGATCTCCAACGATaGCTTCAGGGGCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRLNGDTWAWWHAPVILAFDLQR*LQGHGL Trigger: CAGCCCATGCCCCTGAAGGCATCGTTGGAGATCGAA...TGCTAGTATGACAGGTGCATGCCACCATGCCCAGGTATCTCCATTGAGTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGAGTACATCTTAATTTGGAAAAACGGCCCACTATCAAAGCCCGTGCAAGAGCAGCACGGGGAATaGCAGCCACATCCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNEYILIWKNGPLSKPVQEQHGE*QPHPAA Trigger: GGCGGCAGGATGTGGCTGCCATTCCCCGTGCTGCTC...TTGCACGGGCTTTGATAGTGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| 3UTR CAA 72 bp | GCAGGTAGAATAGCATGTGGCGAAAAATACAGAGTTTaGGCTCGTCGGGTGACGCTTGATGGGAAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGRIACGEKYRV*ARRVTLDGKVQ Trigger: CTGCACCTTCCCATCAAGCGTCACCCGACGAGCCAAAACTCTGTATTTTTCGCCACATGCTATTCTACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAGGAGCAGCACGGGGAATaGCAGCCACATCCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVKVAFLYVSISSFKCSKEQHGE*QPHPAA Trigger: GGCGGCAGGATGTGGCTGCCATTCCCCGTGCTGCTC...CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGGAACTCAGGATTCTGAAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*ELRILKEQSVL Trigger: GAGCACTGACTGCTCTTTCAGAATCCTGAGTTCCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGGCTGGGCTGGTGAGATGGCTCAACAGATAAGAGCACCCGACTGTTCTTTTTGCTGGGTGTGGTaGCATATGTTTTTAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWGWAGEMAQQIRAPDCSFCWVW*HMFLIP Trigger: TGGAATTAAAAACATATGTCACCACACCCAGCAAAA...AGAACAGTCGGGTGCTCTTATCTGTTGAGCCATCTCACCAGCCCAGCCCCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
||
| CDS-3UTR CCA 90 bp | CCACATTTGCGGAGAAGAAGAGGTCGCCTTCCACGAAGAGCACTCCAGACTCAGCCTCCATCTAAAACTTaGTATTCGATCTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRRRRGRLPRRALQTQPPSKT*YSISND Trigger: ATCGTTGGAGATCGAATACCAAGTTTTAGATGGAGG...CTGAGTCTGGAGTGCTCTTCGTGGAAGGCGACCTCTTCTTCTCCGCAAATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGTAGTCAGTAATCCCAGCCTTGGGGAGTCTGTGGCAGGGAGAGTAAGATGCACTCGTTTTGTATaGACACCATCTGATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVSNPSLGESVAGRVRCTRFV*TPSDFL Trigger: AAGAAAATCAGATGGTGTTCATACAAAACGAGTGCA...TCTTACTCTCCCTGCCACAGACTCCCCAAGGCTGGGATTACTGACTACCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| CDS-3UTR CCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCGAGCAGCACGGGGAATaGCAGCCACATCCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYDKYNFFWGILDYPPLIEQHGE*QPHPAA Trigger: GGCGGCAGGATGTGGCTGCCATTCCCCGTGCTGCTC...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
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| CDS-3UTR CCA 90 bp | GTGCTTTTTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTTCTCCTCCATCTAAAACTTaGTATTCGATCTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLFGAGEMAQWLRALTASPPSKT*YSISND Trigger: ATCGTTGGAGATCGAATACCAAGTTTTAGATGGAGG...AGAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCAAAAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| CDS-3UTR TCA 90 bp | CTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCAGTCTTCTTGGCCTTaGACCTCTTCTCCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: LRGRILSHSLSEETQWTLQSSWP*TSSPIL Trigger: TAATATGGGAGAAGAGGTTCAAGGCCAAGAAGACTG...CAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| 3UTR CAA 72 bp | TCTCTGAGTTTCAAGCCAGCTAGGACTACACAGGGCTaGTCTCAGAAATCTACAACCGAACTCAACAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFKPARTTQG*SQKSTTELNNF Trigger: GAAATTGTTGAGTTCGGTTGTAGATTTCTGAGACAAGCCCTGTGTAGTCCTAGCTGGCTTGAAACTCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| CDS-3UTR GCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCTTCGATCTCCAACGATaGCTTCAGGGGCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYDKYNFFWGILDYPPLIFDLQR*LQGHGL Trigger: CAGCCCATGCCCCTGAAGGCATCGTTGGAGATCGAA...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTGGAAAACATTACCCAAGTGAAAAAGATCTTAGCAGATGTGTTCTTTTTCGATCTCCAACGATaGCTTCAGGGGCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFVENITQVKKILADVFFFDLQR*LQGHGL Trigger: CAGCCCATGCCCCTGAAGGCATCGTTGGAGATCGAA...AAAGAACACATCTGCTAAGATCTTTTTCACTTGGGTAATGTTTTCCACAAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCCTCCATCTAAAACTTaGTATTCGATCTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRILSHSLSEETQWTLPPSKT*YSISND Trigger: ATCGTTGGAGATCGAATACCAAGTTTTAGATGGAGG...CAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR CAA 72 bp | TCTCATTGGCCTCTTTTCTGCATCTATTGTAGGAGCTaGGTTAGAAGCCTAGGGCATTTTTCTTGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHWPLFCIYCRS*VRSLGHFSWSV Trigger: AACTGACCAAGAAAAATGCCCTAGGCTTCTAACCAAGCTCCTACAATAGATGCAGAAAAGAGGCCAATGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CCA 90 bp | ATGAACAGCTTTGCTTTCAAAGGTGCTTTTTGGGGCTGGAGAGATGGCTCAGTGTCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MNSFAFKGAFWGWRDGSVSGEVR*KSISNS Trigger: AGAATTAGATATTGATTTCCACCTTACCTCTCCAGA...CACTGAGCCATCTCTCCAGCCCCAAAAAGCACCTTTGAAAGCAAAGCTGTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061203.13 |
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| CDS-3UTR CCA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATAGTAGAGTTTGTATGTaGCCACTTTTGCTTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRILSHSLSEETQWTLLYSRVCM*PLLLSL Trigger: CAGACTAAGCAAAAGTGGCCACATACAAACTCTACT...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| 3UTR CAA 72 bp | TCAAATGCTCTAAGTAGAGTTTGTATGTGGCCACTTTaGCTTAGTCTGGACTTGATGCTGTTGATGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNALSRVCMWPL*LSLDLMLLMDS Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGTCTCAGAAATGGTGCTaGATGTGTTATCAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QYQLYLRGRILSHSLSEESQKWC*MCYQSR Trigger: TCTGCTTTGATAACACATTCAGCACCATTTCTGAGA...CTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTGCTCTTAACCATTGAGCCATCAATCCAGCTCAAAAACCAGATTTTTTCTCAGAAATGGTGCTaGATGTGTTATCAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSVLLTIEPSIQLKNQIFSQKWC*MCYQSR Trigger: TCTGCTTTGATAACACATTCAGCACCATTTCTGAGA...AAAAATCTGGTTTTTGAGCTGGATTGATGGCTCAATGGTTAAGAGCACTGACTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGACAGACAAAGTGGAAATGAGTACATCTTAATTTGGAAAAACGGCCCACCTCCATCTAAAACTTaGTATTCGATCTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTDRQSGNEYILIWKNGPPPSKT*YSISND Trigger: ATCGTTGGAGATCGAATACCAAGTTTTAGATGGAGG...TGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCCACTTTGTCTGTCTGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAAAGAACTCGCACAGGAAGATCATGGCCTGCTGCAATACCACATTTGTCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTRTGRSWPAAIPHLSGEVR*KSISNS Trigger: AGAATTAGATATTGATTTCCACCTTACCTCTCCAGA...CAAATGTGGTATTGCAGCAGGCCATGATCTTCCTGTGCGAGTTCTTTTTCTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118036.8 |
||
| 3UTR CAA 72 bp | CACAGACCAGAAATTGACTCTGTCAAAGTTGCTTTCTaGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRPEIDSVKVAF*YVSISSFKCSK Trigger: CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGAGTCAATTTCTGGTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| 3UTR CAA 72 bp | ACCACCATGACCATCAAGTTAACCACAGACCAGAAATaGACTCTGTCAAAGTTGCTTTCTTGTATGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TTMTIKLTTDQK*TLSKLLSCMFR Trigger: TCGAAACATACAAGAAAGCAACTTTGACAGAGTCAATTTCTGGTCTGTGGTTAACTTGATGGTCATGGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
||
| CDS-3UTR TCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCCAGTCTTCTTGGCCTTaGACCTCTTCTCCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: SYDKYNFFWGILDYPPLIQSSWP*TSSPIL Trigger: TAATATGGGAGAAGAGGTTCAAGGCCAAGAAGACTG...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCAAAGTTGCTTTCTTGTATGTTTCGATCTCGAGCTTCAAATGCTCTAAGCCTCCATCTAAAACTTaGTATTCGATCTCCAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVKVAFLYVSISSFKCSKPPSKT*YSISND Trigger: ATCGTTGGAGATCGAATACCAAGTTTTAGATGGAGG...CTTAGAGCATTTGAAGCTCGAGATCGAAACATACAAGAAAGCAACTTTGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| CDS-3UTR CCA 90 bp | AGTGGAAATGAGTACATCTTAATTTGGAAAAACGGCCCACTATCAAAGCCCGTGTCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNEYILIWKNGPLSKPVSGEVR*KSISNS Trigger: AGAATTAGATATTGATTTCCACCTTACCTCTCCAGA...CACGGGCTTTGATAGTGGGCCGTTTTTCCAAATTAAGATGTACTCATTTCCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119784.2 |
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| CDS-3UTR TCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCCCACAGACCAGAAATTaGCTCTGTCAAAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYDKYNFFWGILDYPPLIPQTRN*LCQSCF Trigger: AAAGCAACTTTGACAGAGTCAATTTCTGGTCTGTGG...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR TCA 90 bp | AGCTATGACAAATACAATTTCTTCTGGGGAATTTTAGATTACCCTCCTTTGATCATAAACTTGAATAGCTaGCACCACCACCATGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYDKYNFFWGILDYPPLIINLNS*HHHHDH Trigger: ATGGTCATGGTGGTGGTGTCAGCTATTCAAGTTTAT...GATCAAAGGAGGGTAATCTAAAATTCCCCAGAAGAAATTGTATTTGTCATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CCA 90 bp | CAGTCAGTGCTCTTAACCATTGAGCCATCAATCCAGCTCAAAAACCAGATTTTTTCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVLLTIEPSIQLKNQIFSGEVR*KSISNS Trigger: AGAATTAGATATTGATTTCCACCTTACCTCTCCAGA...AAAAATCTGGTTTTTGAGCTGGATTGATGGCTCAATGGTTAAGAGCACTGACTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| 3UTR CAA 72 bp | GATGGGAATACAATTCAATTAAAGGGCAGGTATGACTaGTATCATCTAAAGAGCCCCCATGAAGTTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: DGNTIQLKGRYD*YHLKSPHEVIT Trigger: TGTTATAACTTCATGGGGGCTCTTTAGATGATACAAGTCATACCTGCCCTTTAATTGAATTGTATTCCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| CDS-3UTR CCA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCATCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQYQLYLRGRILSHSLSSGEVR*KSISNS Trigger: AGAATTAGATATTGATTTCCACCTTACCTCTCCAGA...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CAA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATCTTTTTCCAGTCTTCTaGGCCTTGAACCTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRILSHSLSEETQWTLLYLFPVF*ALNLFS Trigger: GGAGAAGAGGTTCAAGGCCAAGAAGACTGGAAAAAG...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CAA 90 bp | CGATCTCGAGCTTCAAATGCTCTAAGTAGAGTTTGTATGTGGCCACTTTTGCTTCTTTTTCCAGTCTTCTaGGCCTTGAACCTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSRASNALSRVCMWPLLLLFPVF*ALNLFS Trigger: GGAGAAGAGGTTCAAGGCCAAGAAGACTGGAAAAAG...AAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGAAGCTCGAGATCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119437.8 |
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| CDS-3UTR CAA 90 bp | GGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACGCAGTGGACTCTGCTTTATTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRILSHSLSEETQWTLLYLLSLD*MLLMDS Trigger: GGAATCCATCAACAGCATCAAGTCCAGACTAAGCAA...ATAAAGCAGAGTCCACTGCGTCTCTTCTGAAAGACTGTGACTAAGAATCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CAA 90 bp | CAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGCTGGACTTGATGCTGTaGATGGATTCCAGGATATCT | + |
|
Preference number: 5 (lower is better) Translates to: QYQLYLRGRILSHSLSEELDLML*MDSRIS Trigger: AGATATCCTGGAATCCATCAACAGCATCAAGTCCAG...CTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS-3UTR CAA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCATGTATGTGGCCACTTTaGCTTAGTCTGGACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TVQYQLYLRGRILSHSLSCMWPL*LSLDLM Trigger: CATCAAGTCCAGACTAAGCAAAAGTGGCCACATACA...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS-3UTR CAA 90 bp | CAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGAAGAGACCACAGACCAGAAATaGACTCTGTCAAAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QYQLYLRGRILSHSLSEETTDQK*TLSKLL Trigger: AAGCAACTTTGACAGAGTCAATTTCTGGTCTGTGGT...CTCTTCTGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTACAGTATCAGCTGTATCTAAGAGGTAGGATTCTTAGTCACAGTCTTTCAGTCAAAGTTGCTTTCTaGTATGTTTCGATCTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVQYQLYLRGRILSHSLSVKVAF*YVSISS Trigger: GCTCGAGATCGAAACATACAAGAAAGCAACTTTGAC...TGAAAGACTGTGACTAAGAATCCTACCTCTTAGATACAGCTGATACTGTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS CCA 90 bp | TTTCTTTGTTCAAAAACTAAGGTTCTGCCCTCTGGAGAGGTAAGGTaGAAATCAATATCTAATTCTCCTCCATCTAAAACTTGGTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FLCSKTKVLPSGEVR*KSISNSPPSKTWYS Trigger: CGAATACCAAGTTTTAGATGGAGGAGAATTAGATATTGATTTCCACCTTACCTCTCCAGAGGGCAGAACCTTAGTTTTTGAACAAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000002837.11 ENSMUST00000061203.13 ENSMUST00000117759.2 ENSMUST00000118036.8 ENSMUST00000119437.8 ENSMUST00000119784.2 |
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| CDS CAA 90 bp | GCTCTAAGTAGAGTTTGTATGTGGCCACTTTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCCAGGATATCTTCTAGCTTCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALSRVCMWPLLLSLD*MLLMDSRISSSFIS Trigger: GGAGATGAAGCTAGAAGATATCCTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCACATACAAACTCTACTTAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS CAA 72 bp | AGAGTTTGTATGTGGCCACTTTTGCTTAGTCTGGACTaGATGCTGTTGATGGATTCCAGGATATCTTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVCMWPLLLSLD*MLLMDSRISSS Trigger: GCTAGAAGATATCCTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCACATACAAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
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| CDS CAA 90 bp | TCTCGAGCTTCAAATGCTCTAAGTAGAGTTTGTATGTGGCCACTTTaGCTTAGTCTGGACTTGATGCTGTTGATGGATTCCAGGATATCT | + |
|
Preference number: 6 (lower is better) Translates to: SRASNALSRVCMWPL*LSLDLMLLMDSRIS Trigger: AGATATCCTGGAATCCATCAACAGCATCAAGTCCAGACTAAGCAAAAGTGGCCACATACAAACTCTACTTAGAGCATTTGAAGCTCGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002837.11 |
||
| CDS CAA 90 bp | CATCTCCAGGACATCTGTATTAGTAATATACTTTTTCCAGTCTTCTaGGCCTTGAACCTCTTCTCCCATATTATCCAGGATCAATTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HLQDICISNILFPVF*ALNLFSHIIQDQFK Trigger: TTTGAATTGATCCTGGATAATATGGGAGAAGAGGTTCAAGGCCAAGAAGACTGGAAAAAGTATATTACTAATACAGATGTCCTGGAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
||
| CDS CAA 72 bp | GACATCTGTATTAGTAATATACTTTTTCCAGTCTTCTaGGCCTTGAACCTCTTCTCCCATATTATCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: DICISNILFPVF*ALNLFSHIIQD Trigger: ATCCTGGATAATATGGGAGAAGAGGTTCAAGGCCAAGAAGACTGGAAAAAGTATATTACTAATACAGATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
||
| CDS CAA 90 bp | CAGGACATCTGTATTAGTAATATACTTTTTCCAGTCTTCTTGGCCTaGAACCTCTTCTCCCATATTATCCAGGATCAATTCAAAGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: QDICISNILFPVFLA*NLFSHIIQDQFKEN Trigger: ATTTTCTTTGAATTGATCCTGGATAATATGGGAGAAGAGGTTCAAGGCCAAGAAGACTGGAAAAAGTATATTACTAATACAGATGTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002837.11 ENSMUST00000119437.8 |
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