Pregenerated sensors for TMED1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032180Ensembl transcript IDs: ENSMUST00000034698.9, ENSMUST00000213167.2, ENSMUST00000214285.2, ENSMUST00000214576.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTaGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATGGAAGAAGCG | + |
|
Preference number: 1 (lower is better) Translates to: WEVSSKSHTRCPHPL*QGLRGYRALVMEEA Trigger: CGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR GCA 90 bp | GATTTCAGGAGAAAGCCAGGGCATCCAAGAGCAGTGTCCCCACACTaGTGCGCCCAGCACTTCCACCCTCCAAGGAACAGGCACAGTCGC | + |
|
Preference number: 1 (lower is better) Translates to: DFRRKPGHPRAVSPH*CAQHFHPPRNRHSR Trigger: GCGACTGTGCCTGTTCCTTGGAGGGTGGAAGTGCTGGGCGCAGCAGTGTGGGGACACTGCTCTTGGATGCCCTGGCTTTCTCCTGAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CCA 90 bp | CTCATCCTCTGTGGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATaGAAGAAGCGCTTGAGTGTGCAGACTTGCAGGACAGCCACCAGC | + |
|
Preference number: 1 (lower is better) Translates to: LILCGRGYVGTGRLS*KKRLSVQTCRTATS Trigger: GCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACAGAGGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR GCA 90 bp | GGTACAGGGCGCTTGTCATGGAAGAAGCGCTTGAGTGTGCAGACTTaGAGGACAGCCACCAGCAGCAACACAGCCACATTGGCAGCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: GTGRLSWKKRLSVQT*RTATSSNTATLAAD Trigger: GTCAGCTGCCAATGTGGCTGTGTTGCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR TCA 90 bp | CAGCCACCAGCAGCAACACAGCCACATTGGCAGCTGACCAGAAGTTaGCCCGCTCCAGGTTGTCTTCTTGAAGATTTCGATCACGAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: QPPAATQPHWQLTRS*PAPGCLLEDFDHEP Trigger: AGGCTCGTGATCGAAATCTTCAAGAAGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCTGCTGGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR TCA 90 bp | GACTTGCAGGACAGCCACCAGCAGCAACACAGCCACATTGGCAGCTaGCCAGAAGTTGACCCGCTCCAGGTTGTCTTCTTGAAGATTTCG | + |
|
Preference number: 1 (lower is better) Translates to: DLQDSHQQQHSHIGS*PEVDPLQVVFLKIS Trigger: CGAAATCTTCAAGAAGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCTGCTGGTGGCTGTCCTGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CCA 90 bp | TCTGGCTCCACAGCCTCCGCCCAACCTTCTACCTCCTCCTCATCTTaGAAGCTGTCAAAGATGAGCTCAAAGAACACAAGCTTTTCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SGSTASAQPSTSSSS*KLSKMSSKNTSFSE Trigger: CTCAGAAAAGCTTGTGTTCTTTGAGCTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGTAGAAGGTTGGGCGGAGGCTGTGGAGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGGGGCTACGTGGGTACAGGGGCACTCCCTGGTCACTaGGGAAGGGAGACACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SHTPAALILCGRGYVGTGALPGH*GRETHG Trigger: CCCATGTGTCTCCCTTCCTCAGTGACCAGGGAGTGC...CCCTGTACCCACGTAGCCCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGGGGCTTGAGTGTGCAGACTTaGAGGACAGCCACCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GRCPASHTPAALILCGRGLSVQT*RTATSS Trigger: GCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAA...GCCCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CAA 90 bp | GGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGGACAGCCACCAGCAGCAACACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRGYVGTGRLSWKKR*SVQTCRTATSSNTA Trigger: GGCTGTGTTGCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CAA 90 bp | GCTGCCCTCATCCTCTGTGGCAGGGGCTACGTGGGTACAGGGCGCTaGTCATGGAAGAAGCGCTTGAGTGTGCAGACTTGCAGGACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AALILCGRGYVGTGR*SWKKRLSVQTCRTA Trigger: GGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACAGAGGATGAGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCAGCCACATTGGCAGCTaGCCAGAAGTTGACCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: APREKEGASPKPPTSWLPSHIGS*PEVDPL Trigger: GAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCT...GGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCGTGGCAGGGGCTACGTaGGTACAGGGCGCTTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LHPERRKGPLPNHLLAGSVAGAT*VQGACH Trigger: ATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCAC...GGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGCCTTCTCTGAGGCCCTaGACCCAGAGAGAAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PERRKGPLPNHLLAGSPLPSLRP*TQREGR Trigger: CCTTCCTTCTCTCTGGGTGCAGGGCCTCAGAGAAGG...CAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCCCCTTCCGAGGGGTCTGTGAGCCATTGGCACTCCCTGGTCACTGAGGAACATGGAAGAAGCGCTTaGGTGTGCAGACTTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PPPSEGSVSHWHSLVTEEHGRSA*VCRLAG Trigger: TCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATG...TTCCTCAGTGACCAGGGAGTGCCAATGGCTCACAGACCCCTCGGAAGGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTACGTGGGTACAGGGCGCTTGTCATGGAAGAAGCGCTTGAGTGTGCAGACCAGCTGACCAGAAGTTaGCCCGCTCCAGGTTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GLRGYRALVMEEALECADQLTRS*PAPGCL Trigger: AAGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTG...GTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAGACCCTAGTGAAGTAGGCTTACCCCAGGAGGAGAGCAGAGACATTGCAGTGTCCCCACACTGCTaGGCCCAGCACTTCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: FPDPSEVGLPQEESRDIAVSPHC*AQHFHP Trigger: AGGGTGGAAGTGCTGGGCGCAGCAGTGTGGGGACAC...TGCAATGTCTCTGCTCTCCTCCTGGGGTAAGCCTACTTCACTAGGGTCTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTACAGGGCGCTTGTCATaGAAGAAGCGCTTGAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HPERRKGPLPNHLLAGSPTGRLS*KKRLSV Trigger: CACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGT...AGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAACAGGCACAGTCGCTGAGCCCTCCCCCTTCCGAGGGGTCTGTGAGCCATTGTTTCTGAGATGGTGCTaGAGGAGTTGTCAAAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: GTGTVAEPSPFRGVCEPLFLRWC*RSCQST Trigger: TGTGCTTTGACAACTCCTTCAGCACCATCTCAGAAA...CAATGGCTCACAGACCCCTCGGAAGGGGGAGGGCTCAGCGACTGTGCCTGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTTCACCCCATCCTGATAGCTGCAAGACTGAAGCTAAGGCACGATTTCAGGTGTCCCCACACTGCTaGGCCCAGCACTTCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: TASPHPDSCKTEAKARFQVSPHC*AQHFHP Trigger: AGGGTGGAAGTGCTGGGCGCAGCAGTGTGGGGACAC...CTGAAATCGTGCCTTAGCTTCAGTCTTGCAGCTATCAGGATGGGGTGAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCACCTCCTCCTCATCTTaGAAGCTGTCAAAGATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PAPREKEGASPKPPTSWLTSSSS*KLSKMS Trigger: GCTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGT...GAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGCAGATGTGTCTCCTTCCCAGACCCTAGTGAAGTAGGCTTACCCCAGGAGTCCTGGCAAGAACTCTaGAGATGTGTCTCCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCRCVSFPDPSEVGLPQESWQEL*RCVSFP Trigger: TGGGAAGGAGACACATCTGCAGAGTTCTTGCCAGGA...CTCCTGGGGTAAGCCTACTTCACTAGGGTCTGGGAAGGAGACACATCTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGACTGAAGCTAAGGCACGATTTCAGGAGAAAGCCAGGGCATCCAAGAGCACTGACCATAATTTATTaGCTCCAGTGCCCAGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: ARLKLRHDFRRKPGHPRALTIIY*LQCPGQ Trigger: TTGTCCTGGGCACTGGAGTCAATAAATTATGGTCAG...TGCTCTTGGATGCCCTGGCTTTCTCCTGAAATCGTGCCTTAGCTTCAGTCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR GCA 72 bp | AAGCCAGGGCATCCAAGAGCAGTGTCCCCACACTGCTaGGCCCAGCACTTCCACCCTCCAAGGAACAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KPGHPRAVSPHC*AQHFHPPRNRH Trigger: GTGCCTGTTCCTTGGAGGGTGGAAGTGCTGGGCGCAGCAGTGTGGGGACACTGCTCTTGGATGCCCTGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CCA 72 bp | CTGAGCCCTCCCCCTTCCGAGGGGTCTGTGAGCCATTaGCACTCCCTGGTCACTGAGGAAGGGAGACACATG | + |
|
Preference number: 3 (lower is better) Translates to: LSPPPSEGSVSH*HSLVTEEGRHM Trigger: CATGTGTCTCCCTTCCTCAGTGACCAGGGAGTGCCAATGGCTCACAGACCCCTCGGAAGGGGGAGGGCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CCA 72 bp | TCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTaGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SSKSHTRCPHPL*QGLRGYRALVM Trigger: CATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTGTGGGTACAGGGCGCTaGTCATGGAAGAAGCGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HPERRKGPLPNHLLAGSPVGTGR*SWKKRL Trigger: CAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCAC...AGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCCCTTCCGAGGGGTCTGTGAGCCATTGGCACTCCCTGGTCACTGAGGAATCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPPSEGSVSHWHSLVTEESWKKR*SVQTCR Trigger: CCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGA...TTCCTCAGTGACCAGGGAGTGCCAATGGCTCACAGACCCCTCGGAAGGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCATCCAAGAGCAGTGTCCCCACACTGCTGCGCCCAGCACTTCCACCCTCTACCTCCTCCTCATCTaGGAAGCTGTCAAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGIQEQCPHTAAPSTSTLYLLLI*EAVKDE Trigger: CTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGTA...GAGGGTGGAAGTGCTGGGCGCAGCAGTGTGGGGACACTGCTCTTGGATGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CCA 72 bp | TGTGGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATaGAAGAAGCGCTTGAGTGTGCAGACTTGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: CGRGYVGTGRLS*KKRLSVQTCRT Trigger: TGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCACGATTTCAGGAGAAAGCCAGGGCATCCAAGAGCAGTGTCCCCACACTGGCAGCTGACCAGAAGTaGACCCGCTCCAGGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KARFQEKARASKSSVPTLAADQK*TRSRLS Trigger: AGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTGC...CAGTGTGGGGACACTGCTCTTGGATGCCCTGGCTTTCTCCTGAAATCGTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCACGATTTCAGGAGAAAGCCAGGGCATCCAAGAGCAGTGTCCCCACACTGCTTGAGTGTGCAGACTaGCAGGACAGCCACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KARFQEKARASKSSVPTLLECAD*QDSHQQ Trigger: CTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAG...CAGTGTGGGGACACTGCTCTTGGATGCCCTGGCTTTCTCCTGAAATCGTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTCAAATATCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLAGSPLGQGARAPSFQISWKKR*SVQTCR Trigger: CCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGA...TATTTGAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR TCA 72 bp | GACAGCCACCAGCAGCAACACAGCCACATTGGCAGCTaGCCAGAAGTTGACCCGCTCCAGGTTGTCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSHQQQHSHIGS*PEVDPLQVVFL Trigger: CAAGAAGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCTGCTGGTGGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAGACCCTAGTGAAGTAGGCTTACCCCAGGAGGAGAGCAGAGACATTGCACTTGAGTGTGCAGACTaGCAGGACAGCCACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPDPSEVGLPQEESRDIALECAD*QDSHQQ Trigger: CTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAG...TGCAATGTCTCTGCTCTCCTCCTGGGGTAAGCCTACTTCACTAGGGTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGGGCTACGTGGGTACAGGGCGCTTGTCATGGAAGAAGCGCTTGAGTGTCTCCAGGTTGTCTTCTaGAAGATTTCGATCACGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WQGLRGYRALVMEEALECLQVVF*KISITS Trigger: GCTCGTGATCGAAATCTTCAAGAAGACAACCTGGAG...ACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCCAAGGGGCCAGGGCTCCTTCCTTTCAAATAAAAGTGACTGTCCTGGCAAGCAACACAGCCACATaGGCAGCTGACCAGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LGQGARAPSFQIKVTVLASNTAT*AADQKL Trigger: CAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCT...TGCCAGGACAGTCACTTTTATTTGAAAGGAAGGAGCCCTGGCCCCTTGGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR GCA 72 bp | GGGGGCAGCACCACAGCTTCACCCCATCCTGATAGCTaGAAGACTGAAGCTAAGGCACGATTTCAGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGSTTASPHPDS*KTEAKARFQEK Trigger: TTTCTCCTGAAATCGTGCCTTAGCTTCAGTCTTGCAGCTATCAGGATGGGGTGAAGCTGTGGTGCTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCACGATTTCAGGAGAAAGCCAGGGCATCCAAGAGCAGTGTCCCCACACTGAGGAGAGCAGAGACATaGCAGTTGGGGTGTCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KARFQEKARASKSSVPTLRRAET*QLGCLV Trigger: AACTAGACACCCCAACTGCAATGTCTCTGCTCTCCT...CAGTGTGGGGACACTGCTCTTGGATGCCCTGGCTTTCTCCTGAAATCGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTCAAATAAATACCTCCTCCTCATCTaGGAAGCTGTCAAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSWLPSGPRGQGSFLSNKYLLLI*EAVKDE Trigger: CTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGTA...TTTATTTGAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTCAAATAGTCTCTATGGATTCCTaGATGTCTTCCATTTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LLAGSPLGQGARAPSFQIVSMDS*MSSILT Trigger: TGTCAAAATGGAAGACATCAAGGAATCCATAGAGAC...TATTTGAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATGGAAGAAGCGCTTGAGTGTGCAGACTTGCAGGACAGCCACCAGCAGCAAGTCTCTATGGATTCCTaGATGTCTTCCATTTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VMEEALECADLQDSHQQQVSMDS*MSSILT Trigger: TGTCAAAATGGAAGACATCAAGGAATCCATAGAGAC...TTGCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGGGACCAACAGCACACCCTaGGGGCTCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGVQQVTHPLPSSSVAGTNSTP*GLSKVK Trigger: CTTCACCTTGGAGAGCCCTCAGGGTGTGCTGTTGGT...CCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCCTTCCGAGGGGTCTGTGAGCCATTGGCACTCCCTGGTCACTGAGGAAAGCCACATTGGCAGCTaGCCAGAAGTTGACCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSEGSVSHWHSLVTEESHIGS*PEVDPL Trigger: GAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCT...TTCCTCAGTGACCAGGGAGTGCCAATGGCTCACAGACCCCTCGGAAGGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCACAGTCGCTGAGCCCTCCCCCTTCCGAGGGGTCTGTGAGCCATTGGCACACTAGCATTGGCCGGTaGGGACTGATAGAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QAQSLSPPPSEGSVSHWHTSIGR*GLIETL Trigger: CAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGT...GTGCCAATGGCTCACAGACCCCTCGGAAGGGGGAGGGCTCAGCGACTGTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGTTGAGTGTGCAGACTTaGAGGACAGCCACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLGGVQQVTHPLPSSSVLSVQT*RTATSS Trigger: GCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAA...CACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCACAGGGCGCTTGTCATaGAAGAAGCGCTTGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPREKEGASPKPPTSWLTGRLS*KKRLSV Trigger: CACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGT...GAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| 3UTR CAA 72 bp | TACGTGGGTACAGGGCGCTTGTCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGGACAGCCACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVGTGRLSWKKR*SVQTCRTATSS Trigger: GCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| 3UTR CAA 72 bp | ATCCTCTGTGGCAGGGGCTACGTGGGTACAGGGCGCTaGTCATGGAAGAAGCGCTTGAGTGTGCAGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILCGRGYVGTGR*SWKKRLSVQTC Trigger: GCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCACGTAGCCCCTGCCACAGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACGAGGGCTCTCCAAGGTaGAGTCCACGTCCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQLCSVSSESGRCPASHEGSPR*SPRPAQ Trigger: CTGGGCTGGACGTGGACTTCACCTTGGAGAGCCCTC...GTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214576.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCACTAGCATTGGCCGGTaGGGACTGATAGAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHPERRKGPLPNHLLAGSTSIGR*GLIETL Trigger: CAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGT...GGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214285.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCCTGATAGCTGCAAGACTGAAGCTAAGGCACGATTTCAGGAGAAAGCCAGAGGGCTCTCCAAGGTaGAGTCCACGTCCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PILIAARLKLRHDFRRKPEGSPR*SPRPAQ Trigger: CTGGGCTGGACGTGGACTTCACCTTGGAGAGCCCTC...TGGCTTTCTCCTGAAATCGTGCCTTAGCTTCAGTCTTGCAGCTATCAGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214576.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCATGGAAGAAGCGCTTaGGTGTGCAGACTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSSESGRCPASHTPAAHGRSA*VCRLAG Trigger: TCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATG...GGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCACTAGCATTGGCCGGTaGGGACTGATAGAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSESGRCPASHTPAALTSIGR*GLIETL Trigger: CAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGT...GAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGGACCTCCTCCTCATCTTaGAAGCTGTCAAAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REKEGASPKPPTSWLPSGTSSSS*KLSKMS Trigger: GCTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGT...CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| 3UTR CAA 72 bp | GCGCTTGTCATGGAAGAAGCGCTTGAGTGTGCAGACTaGCAGGACAGCCACCAGCAGCAACACAGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: ALVMEEALECAD*QDSHQQQHSHI Trigger: AATGTGGCTGTGTTGCTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGACAAGCGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR TCA 90 bp | AACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGAGCCACATTGGCAGCTaGCCAGAAGTTGACCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NYVVSHLSLGGVQQVTHPSHIGS*PEVDPL Trigger: GAGCGGGTCAACTTCTGGTCAGCTGCCAATGTGGCT...CGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCTTTCTGAGATGGTGCTaGAGGAGTTGTCAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSESGRCPASHTPAALFLRWC*RSCQST Trigger: TGTGCTTTGACAACTCCTTCAGCACCATCTCAGAAA...GAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR TCA 90 bp | CTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTCATGGAAGAAGCGCTTaGGTGTGCAGACTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCSVSSESGRCPASHTPAHGRSA*VCRLAG Trigger: TCCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATG...AGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACAGCTGACCAGAAGTTaGCCCGCTCCAGGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQLCSVSSESGRCPASHTQLTRS*PAPGCL Trigger: AAGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTG...TGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR GCA 90 bp | CACATGGGGCCACTGCTAAGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HMGPLLRTQLCSVSSESGTSIGR*GLIETL Trigger: CAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGT...CCCAGACTCAGATGAGACACTACATAGTTGGGTCCTTAGCAGTGGCCCCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGCTAAGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAACAGGGCGCTTGTCATaGAAGAAGCGCTTGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRTQLCSVSSESGRCPTGRLS*KKRLSV Trigger: CACACTCAAGCGCTTCTTCCATGACAAGCGCCCTGT...TGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGTCCTTAGCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCAGCCGGGTCCTCATaGTCTCTATGGATTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLCSVSSESGRCPASHTPAGSS*SLWIPG Trigger: ACCAGGAATCCATAGAGACCATGAGGACCCGGCTGG...TGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213167.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTCTATGGATTCCTTGATGTCTTCCATTTTGACATCAAGCATCTCTTCTGGCCCAACAGCACACCCTaGGGGCTCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYGFLDVFHFDIKHLFWPNSTP*GLSKVK Trigger: CTTCACCTTGGAGAGCCCTCAGGGTGTGCTGTTGGG...CCAGAAGAGATGCTTGATGTCAAAATGGAAGACATCAAGGAATCCATAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214576.2 |
||
| CDS CCA 90 bp | CACTGCTTTCTCCCGGCGGGAAGCAGAAATGTGAACTCGCCGTCCTaGATAGGCGGCGGCCCTGCCTCTCCCACTCCTACTGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HCFLPAGSRNVNSPS*IGGGPASPTPTAGR Trigger: CCTGCCAGCAGTAGGAGTGGGAGAGGCAGGGCCGCCGCCTATCCAGGACGGCGAGTTCACATTTCTGCTTCCCGCCGGGAGAAAGCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGGGTGGGTACAGGGCGCTaGTCATGGAAGAAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRCPASHTPAALILCGRVGTGR*SWKKRL Trigger: CAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCAC...CCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS TCA 90 bp | TGTACCCCATCAGCCTTTCGAGACTCACTGACCAACAGCACACCCTaGGGGCTCTCCAAGGTGAAGTCCACGTCCAGCCCAGCACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CTPSAFRDSLTNSTP*GLSKVKSTSSPAPP Trigger: CGGAGGTGCTGGGCTGGACGTGGACTTCACCTTGGAGAGCCCTCAGGGTGTGCTGTTGGTCAGTGAGTCTCGAAAGGCTGATGGGGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGGGCTCCAGGTTGTCTTCTaGAAGATTTCGATCACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGGVQQVTHPLPSSSVAGLQVVF*KISITS Trigger: GCTCGTGATCGAAATCTTCAAGAAGACAACCTGGAG...CCCTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTTGAGTGTGCAGACTaGCAGGACAGCCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSESGRCPASHTPAALECAD*QDSHQQ Trigger: CTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAG...GGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS GCA 90 bp | GTAGGCTCCACCCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGGAAGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGSTLVLGLKTSIGR*GLIETLLSPGGKQK Trigger: TTTCTGCTTCCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGGTGGAGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCATCCTCTGTGGCAGTACCTCCTCCTCATCTaGGAAGCTGTCAAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWEVSSKSHTRCPHPLWQYLLLI*EAVKDE Trigger: CTCATCTTTGACAGCTTCCAAGATGAGGAGGAGGTA...CTGCCACAGAGGATGAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS GCA 90 bp | ACCTCCGATCACCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGGAAGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSDHLVLGLKTSIGR*GLIETLLSPGGKQK Trigger: TTTCTGCTTCCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGTGATCGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214576.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTCAAATAAAAGTGACTGTCCTGGCAGCAACACAGCCACATaGGCAGCTGACCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPRGQGSFLSNKSDCPGSNTAT*AADQKL Trigger: CAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCT...GCCAGGACAGTCACTTTTATTTGAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS GCA 90 bp | CTCTATGGATTCCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGGAAGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYGFLVLGLKTSIGR*GLIETLLSPGGKQK Trigger: TTTCTGCTTCCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGAATCCATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTGCAGCTGACCAGAAGTaGACCCGCTCCAGGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRTQLCSVSSESGRCPASAADQK*TRSRLS Trigger: AGACAACCTGGAGCGGGTCAACTTCTGGTCAGCTGC...ACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGTCCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGGCCACTGCTAAGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGAGCAACACAGCCACATaGGCAGCTGACCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MGPLLRTQLCSVSSESGRSNTAT*AADQKL Trigger: CAACTTCTGGTCAGCTGCCAATGTGGCTGTGTTGCT...CCTCCCAGACTCAGATGAGACACTACATAGTTGGGTCCTTAGCAGTGGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCTGATAGCTGCAAGACTGAAGCTAAGGCACGATTTCAGGAGAAAGCCACTTGAGTGTGCAGACTaGCAGGACAGCCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PILIAARLKLRHDFRRKPLECAD*QDSHQQ Trigger: CTGCTGGTGGCTGTCCTGCAAGTCTGCACACTCAAG...TGGCTTTCTCCTGAAATCGTGCCTTAGCTTCAGTCTTGCAGCTATCAGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGACCCTAGTGAAGTAGGCTTACCCCAGGAGGAGAGCAGAGACATTGCATCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPDPSEVGLPQEESRDIASWKKR*SVQTCR Trigger: CCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGA...TGCAATGTCTCTGCTCTCCTCCTGGGGTAAGCCTACTTCACTAGGGTCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR CAA 90 bp | CTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTTCATGGAAGAAGCGCTaGAGTGTGCAGACTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCSVSSESGRCPASHTPASWKKR*SVQTCR Trigger: CCTGCAAGTCTGCACACTCAAGCGCTTCTTCCATGA...AGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGGACCCAACTATGTAGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTGTGGGTACAGGGCGCTaGTCATGGAAGAAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTQLCSVSSESGRCPASVGTGR*SWKKRL Trigger: CAAGCGCTTCTTCCATGACAAGCGCCCTGTACCCAC...ACTTGCTGGACACCTCCCAGACTCAGATGAGACACTACATAGTTGGGTCCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGGCACGATTTCAGGAGAAAGCCAGGGCATCCAAGAGCAGTGTCCCCACACCTCCAGGTTGTCTTCTaGAAGATTTCGATCACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRHDFRRKPGHPRAVSPHLQVVF*KISITS Trigger: GCTCGTGATCGAAATCTTCAAGAAGACAACCTGGAG...GTGTGGGGACACTGCTCTTGGATGCCCTGGCTTTCTCCTGAAATCGTGCCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCATCTGAGTCTGGGAGGTGTCCAGCAAGTCACACACCCGCTGCCCTCGTCTCTATGGATTCCTaGATGTCTTCCATTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSESGRCPASHTPAALVSMDS*MSSILT Trigger: TGTCAAAATGGAAGACATCAAGGAATCCATAGAGAC...GAGGGCAGCGGGTGTGTGACTTGCTGGACACCTCCCAGACTCAGATGAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034698.9 |
||
| CDS CCA 72 bp | CTCCCGGCGGGAAGCAGAAATGTGAACTCGCCGTCCTaGATAGGCGGCGGCCCTGCCTCTCCCACTCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: LPAGSRNVNSPS*IGGGPASPTPT Trigger: AGTAGGAGTGGGAGAGGCAGGGCCGCCGCCTATCCAGGACGGCGAGTTCACATTTCTGCTTCCCGCCGGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034698.9 ENSMUST00000213167.2 ENSMUST00000214285.2 ENSMUST00000214576.2 |
||
| CDS TCA 72 bp | CTCCACCCAACAGCACACCCTGAGGGCTCTCCAAGGTaGAGTCCACGTCCAGCCCAGCACCTCCGATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LHPTAHPEGSPR*SPRPAQHLRSP Trigger: AGGTGATCGGAGGTGCTGGGCTGGACGTGGACTTCACCTTGGAGAGCCCTCAGGGTGTGCTGTTGGGTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214576.2 |
||
| CDS CCA 72 bp | GTGAAGTCCACGTCCAGCCCAGCACCTCCGATCACCTaGTACTCGGTCTCAAGACTAGCATTGGCCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VKSTSSPAPPIT*YSVSRLALAGA Trigger: CGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGTGATCGGAGGTGCTGGGCTGGACGTGGACTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214576.2 |
||
| CDS GCA 72 bp | CACCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLVLGLKTSIGR*GLIETLLSPGG Trigger: CCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034698.9 ENSMUST00000214576.2 |
||
| CDS GCA 72 bp | ACCCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLVLGLKTSIGR*GLIETLLSPGG Trigger: CCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214285.2 |
||
| CDS GCA 72 bp | TTCCTGGTACTCGGTCTCAAGACTAGCATTGGCCGGTaGGGACTGATAGAAACACTGCTTTCTCCCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLVLGLKTSIGR*GLIETLLSPGG Trigger: CCCGCCGGGAGAAAGCAGTGTTTCTATCAGTCCGCACCGGCCAATGCTAGTCTTGAGACCGAGTACCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213167.2 |
||