Pregenerated sensors for TMCO6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006850Ensembl transcript IDs: ENSMUST00000007046.9, ENSMUST00000237727.2, ENSMUST00000237870.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGATGCAGGCAGCAAAGGCTGGGACAATGCCCTGCGGCAGGAGCTaGTTTCTCACGGCCTCACTCTCCACGATGAGGTTCCCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: WMQAAKAGTMPCGRS*FLTASLSTMRFPSV Trigger: CACACTGGGGAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAGCAGCTCCTGCCGCAGGGCATTGTCCCAGCCTTTGCTGCCTGCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 90 bp | AGCACGGGGCATGCAAGCAGCTCTAGTCCCACATCATCCATTCTCTaGACAGTCCCAGCCAAGTCCAAAAGCAGCAGTGCCAACGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: STGHASSSSPTSSIL*TVPAKSKSSSANVG Trigger: GCCCACGTTGGCACTGCTGCTTTTGGACTTGGCTGGGACTGTGCAGAGAATGGATGATGTGGGACTAGAGCTGCTTGCATGCCCCGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CCA 90 bp | ATAGAGGGAATGATCTTCTCTGGGGCTTCCTTAGCCTGCAGAAGCTaGGACAAGGCATATCCAAGTGCTTCCAGCACAGCCACATGGGGG | + |
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Preference number: 1 (lower is better) Translates to: IEGMIFSGASLACRS*DKAYPSASSTATWG Trigger: CCCCCATGTGGCTGTGCTGGAAGCACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 90 bp | GAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTCCTTAGCCTaGAGAAGCTGGGACAAGGCATATCCAAGTGCTTCCAGCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: ESRIEGMIFSGASLA*RSWDKAYPSASSTA Trigger: GGCTGTGCTGGAAGCACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CCA 90 bp | CCAAGGTTCAGCTTCGGGCCTGGTTGCATCAACCATAGCATCTGCTaGGGAAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PRFSFGPGCINHSIC*GRLESRIEGMIFSG Trigger: CCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAAGCTGAACCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR TCA 90 bp | CCTTTTAGGGACCCAAGGACCCACCACTGCAAGATAGTTGTAAGATaGGAGACCTTCACTAACAGGGTAGGGAAAGGTGTGGACCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PFRDPRTHHCKIVVR*ETFTNRVGKGVDPS Trigger: GGAAGGGTCCACACCTTTCCCTACCCTGTTAGTGAAGGTCTCTCATCTTACAACTATCTTGCAGTGGTGGGTCCTTGGGTCCCTAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 90 bp | ACCCCAAGGTTCAGCTTCGGGCCTGGTTGCATCAACCATAGCATCTaGTGGGGAAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TPRFSFGPGCINHSI*WGRLESRIEGMIFS Trigger: AGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAAGCTGAACCTTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 90 bp | AAGATAAATAAGGCTGCCACAAGTCGCTCGTCTCTGAGCTCCATTTaGTGTCCCATGACCTCCGCTGGCACTTCTGTTAACAGGTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: KINKAATSRSSLSSI*CPMTSAGTSVNRLL Trigger: AAGCAACCTGTTAACAGAAGTGCCAGCGGAGGTCATGGGACAGCAAATGGAGCTCAGAGACGAGCGACTTGTGGCAGCCTTATTTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR TCA 90 bp | TTTGGAGAGTGGGACATGATGGTGCATACTAGCAATTCTAGTACCTaGGCTGAGGCAGGAGGATTGCCAGTTTGTGAGACACTAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: FGEWDMMVHTSNSST*AEAGGLPVCETLRK Trigger: TTTTCTTAGTGTCTCACAAACTGGCAATCCTCCTGCCTCAGCTCAGGTACTAGAATTGCTAGTATGCACCATCATGTCCCACTCTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGCTGCTTTCTCACGGCCTCACTCTCCACGATGAGGTTCCCCAGTGTGTAGACCAGAGAGGTAGGTaGGGAGGTAGGAAGTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: QELLSHGLTLHDEVPQCVDQRGR*GGRKSL Trigger: CAGCGACTTCCTACCTCCTCACCTACCTCTCTGGTC...TACACACTGGGGAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAGCAGCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGCTGCTTTCTCACGGCCTCACTCTCCACGATGAGGTTCCCCAGTGTGTAGCAGGCCTCAGCCACTaGAGACTGCTCAGAATGAGA | + |
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Preference number: 2 (lower is better) Translates to: QELLSHGLTLHDEVPQCVAGLSH*RLLRMR Trigger: TCTCATTCTGAGCAGTCTGCAGTGGCTGAGGCCTGC...TACACACTGGGGAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAGCAGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGGGCCTGGTTGCATCAACCATAGCATCTGCTGGGGAAGACTGGAATCCAGAGCTGGGACAATGCCCTaGGGCAGGAGCTGCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FGPGCINHSICWGRLESRAGTMP*GRSCFL Trigger: GAGAAAGCAGCTCCTGCCGCAGGGCATTGTCCCAGC...TCTGGATTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCAAGCAGCTCTAGTCCCACATCATCCATTCTCTGCACAGTCCCAGCCAAGTCCAGCACAGCCACATaGGGGGACTGGATGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: HASSSSPTSSILCTVPAKSSTAT*GDWMQA Trigger: TGCCTGCATCCAGTCCCCCCATGTGGCTGTGCTGGA...CTTGGCTGGGACTGTGCAGAGAATGGATGATGTGGGACTAGAGCTGCTTGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CAA 90 bp | TCCATTTGCTGTCCCATGACCTCCGCTGGCACTTCTGTTAACAGGTaGCTTAGACACCGAAGCACGGGGCATGCAAGCAGCTCTAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SICCPMTSAGTSVNR*LRHRSTGHASSSSP Trigger: GGGACTAGAGCTGCTTGCATGCCCCGTGCTTCGGTGTCTAAGCAACCTGTTAACAGAAGTGCCAGCGGAGGTCATGGGACAGCAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR GCA 90 bp | CGTGGGCAGAGCCCCATGGGTAAGGAGTACAGCATTGTTGACCTGGCTGCAGATCAAGGCATATCCAAGTaGTTCCAGCACAGCCACATG | + |
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Preference number: 2 (lower is better) Translates to: RGQSPMGKEYSIVDLAADQGISK*FQHSHM Trigger: CATGTGGCTGTGCTGGAAGCACTTGGATATGCCTTG...ATCTGCAGCCAGGTCAACAATGCTGTACTCCTTACCCATGGGGCTCTGCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCTTCTGAGACACACCACACCTaGCTCCTGTCAGGATCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SERVLLWSPNWPQTQGPSETHHT*LLSGSR Trigger: CCTAGATCCTGACAGGAGGCAGGTGTGGTGTGTCTC...AGAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATGGTACTACGGGTGAGACACACCACACCTGCCTCCTGTCAGGATCTAGGCGAACTGATAAAAGGATaGGGGGCAATGAGTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: VMVLRVRHTTPASCQDLGELIKG*GAMSGT Trigger: TGTACCACTCATTGCCCCTCATCCTTTTATCAGTTC...GCCTAGATCCTGACAGGAGGCAGGTGTGGTGTGTCTCACCCGTAGTACCATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAATAAGGCTGCCACAAGTCGCTCGTCTCTGAGCTCCATTTGCTGTCCCGGGAATGATCTTCTCTaGGGCTTCCTTAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KINKAATSRSSLSSICCPGNDLL*GFLSLQ Trigger: CTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCC...GGGACAGCAAATGGAGCTCAGAGACGAGCGACTTGTGGCAGCCTTATTTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTAGCAATTCTAGTACCTaGGCTGAGGCAGGAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: FSSERVLLWSPNWPQTQGSNSST*AEAGGL Trigger: CAATCCTCCTGCCTCAGCTCAGGTACTAGAATTGCT...ACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTGGGGAAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTTAGCCTGCAGAAGCTaGGACAAGGCATATCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ICWGRLESRIEGMIFSGALACRS*DKAYPS Trigger: ACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAA...AGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGACACACCACACCTGCCTCCTGTCAGGATCTAGGCAAGTCTAGTTTGGAGAGGATTGCCAGTTTGTaGGACACTAAGAAAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: VRHTTPASCQDLGKSSLERIASL*DTKKTK Trigger: TTTTGTTTTCTTAGTGTCTCACAAACTGGCAATCCT...CTCCAAACTAGACTTGCCTAGATCCTGACAGGAGGCAGGTGTGGTGTGTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCAATCTGTATTTGTTTCCTAACAAATCTACCCTCCCTTTGGCCTTAATACCATTTGCTGTCCCATaGCCTCCGCTGGCACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PLNLYLFPNKSTLPLALIPFAVP*PPLALL Trigger: CAGAAGTGCCAGCGGAGGTCATGGGACAGCAAATGG...TATTAAGGCCAAAGGGAGGGTAGATTTGTTAGGAAACAAATACAGATTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR GCA 90 bp | ACACACCCACCCCCTTACTCTCTTGACTTCCTCTCAATCTGTATTTGTTTCCTAACATCATCCATTCTCTaGACAGTCCCAGCCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: THPPPYSLDFLSICICFLTSSIL*TVPAKS Trigger: GGACTTGGCTGGGACTGTGCAGAGAATGGATGATGT...TAGGAAACAAATACAGATTGAGAGGAAGTCAAGAGAGTAAGGGGGTGGGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCAATCTGTATTTGTTTCCTAACAAATCTACCCTCCCTTTGGCCTTAATACCTCACTCTCCACGATaGGGTTCCCCAGTGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: PLNLYLFPNKSTLPLALIPHSPR*GSPVCT Trigger: TGTACACACTGGGGAACCTCATCGTGGAGAGTGAGG...TATTAAGGCCAAAGGGAGGGTAGATTTGTTAGGAAACAAATACAGATTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 72 bp | GCAGCAAAGGCTGGGACAATGCCCTGCGGCAGGAGCTaGTTTCTCACGGCCTCACTCTCCACGATGAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: AAKAGTMPCGRS*FLTASLSTMRF Trigger: GAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAGCAGCTCCTGCCGCAGGGCATTGTCCCAGCCTTTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CCA 72 bp | TCCAAAAGCAGCAGTGCCAACGTGGGCAGAGCCCCATaGGTAAGGAGTACAGCATTGTTGACCTGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SKSSSANVGRAP*VRSTALLTWLQ Trigger: CTGCAGCCAGGTCAACAATGCTGTACTCCTTACCCATGGGGCTCTGCCCACGTTGGCACTGCTGCTTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 72 bp | TCCATGGCAACCCCAAGGTTCAGCTTCGGGCCTGGTTaGATCAACCATAGCATCTGCTGGGGAAGACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SMATPRFSFGPG*INHSICWGRLE Trigger: TTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAAGCTGAACCTTGGGGTTGCCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 72 bp | AAGGCTGCCACAAGTCGCTCGTCTCTGAGCTCCATTTaGTGTCCCATGACCTCCGCTGGCACTTCTGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: KAATSRSSLSSI*CPMTSAGTSVN Trigger: GTTAACAGAAGTGCCAGCGGAGGTCATGGGACAGCAAATGGAGCTCAGAGACGAGCGACTTGTGGCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAGACACACCACACCTGCCTCCTGTCAGGATCTAGGCAAGTCTAGTTTGGAGGCTGAGGCAGGAGGATaGCCAGTTTGTGAGACACTA | + |
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Preference number: 3 (lower is better) Translates to: VRHTTPASCQDLGKSSLEAEAGG*PVCETL Trigger: TAGTGTCTCACAAACTGGCAATCCTCCTGCCTCAGC...CTCCAAACTAGACTTGCCTAGATCCTGACAGGAGGCAGGTGTGGTGTGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR GCA 72 bp | ATAGAGGGAATGATCTTCTCTGGGGCTTCCTTAGCCTaGAGAAGCTGGGACAAGGCATATCCAAGTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: IEGMIFSGASLA*RSWDKAYPSAS Trigger: GGAAGCACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR GCA 72 bp | TTCAGCTTCGGGCCTGGTTGCATCAACCATAGCATCTaGTGGGGAAGACTGGAATCCAGAATAGAGGGAATG | + |
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Preference number: 3 (lower is better) Translates to: FSFGPGCINHSI*WGRLESRIEGM Trigger: CATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CCA 72 bp | TTTTCTTCAGAGAGGGTCTTGCTATGGAGCCCAAATTaGCCTCAAACTCAGGGTCCTTCTGCCTTAACCCCC | + |
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Preference number: 3 (lower is better) Translates to: FSSERVLLWSPN*PQTQGPSALTP Trigger: GGGGGTTAAGGCAGAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR CCA 72 bp | AAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTaGGGCTTCCTTAGCCTGCAGAAGCTGGGACAAGGC | + |
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Preference number: 3 (lower is better) Translates to: KTGIQNRGNDLL*GFLSLQKLGQG Trigger: GCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CCA 72 bp | AGCTTCGGGCCTGGTTGCATCAACCATAGCATCTGCTaGGGAAGACTGGAATCCAGAATAGAGGGAATGATC | + |
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Preference number: 3 (lower is better) Translates to: SFGPGCINHSIC*GRLESRIEGMI Trigger: GATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGATGCTATGGTTGATGCAACCAGGCCCGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCTTCTGAGACAGTAGCTGGGTaGACGTTACTGACAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SERVLLWSPNWPQTQGPSETVAG*TLLTSK Trigger: CTTACTTGTCAGTAACGTCAACCCAGCTACTGTCTC...AGAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR TCA 72 bp | TGGGACATGATGGTGCATACTAGCAATTCTAGTACCTaGGCTGAGGCAGGAGGATTGCCAGTTTGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: WDMMVHTSNSST*AEAGGLPVCET Trigger: TGTCTCACAAACTGGCAATCCTCCTGCCTCAGCTCAGGTACTAGAATTGCTAGTATGCACCATCATGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCAATCTGTATTTGTTTCCTAACAAATCTACCCTCCCTTTGGCCTTAATATGGATACCAGTGAGGTaGTTGAGGAGCCAGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: PLNLYLFPNKSTLPLALIWIPVR*LRSQRP Trigger: GGGCCTCTGGCTCCTCAACAACCTCACTGGTATCCA...TATTAAGGCCAAAGGGAGGGTAGATTTGTTAGGAAACAAATACAGATTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR TCA 90 bp | AGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTCCTTAGCCTGCCAAACGCCAGCGTCCTaGGGCGGCCCTGCCGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: RLESRIEGMIFSGASLACQTPAS*GGPAAD Trigger: ATCGGCGGCAGGGCCGCCTCAGGACGCTGGCGTTTG...GCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR TCA 90 bp | TTTCTTCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCAAACGCCAGCGTCCTaGGGCGGCCCTGCCGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: FLQRGSCYGAQIGLKLRVQTPAS*GGPAAD Trigger: ATCGGCGGCAGGGCCGCCTCAGGACGCTGGCGTTTG...GACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| CDS-3UTR GCA 90 bp | CATGCAAGCAGCTCTAGTCCCACATCATCCATTCTCTGCACAGTCCCAGCCAAGCAAGGGTCCGCATGCTaGCCTCCAGCCTCCGACCTG | + |
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Preference number: 4 (lower is better) Translates to: HASSSSPTSSILCTVPAKQGSAC*PPASDL Trigger: CAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTG...CTTGGCTGGGACTGTGCAGAGAATGGATGATGTGGGACTAGAGCTGCTTGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR GCA 90 bp | AGACACCGAAGCACGGGGCATGCAAGCAGCTCTAGTCCCACATCATCCATTCTCCAACAAGGGTCCGCATaGTGCCCTCCAGCCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: RHRSTGHASSSSPTSSILQQGSA*CPPASD Trigger: GTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGTTG...GAGAATGGATGATGTGGGACTAGAGCTGCTTGCATGCCCCGTGCTTCGGTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCTTCCTTAGCCTGCAGAAGCTGGGACAAGGCATATCCAAGTGCTTCCAGAGCCGAAGGAACTGCTaGACCTCGGCTTCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: WGFLSLQKLGQGISKCFQSRRNC*TSASPR Trigger: CCTTGGGGAAGCCGAGGTCCAGCAGTTCCTTCGGCT...CTGGAAGCACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| 3UTR CAA 72 bp | TGTCCCATGACCTCCGCTGGCACTTCTGTTAACAGGTaGCTTAGACACCGAAGCACGGGGCATGCAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CPMTSAGTSVNR*LRHRSTGHASS Trigger: GCTGCTTGCATGCCCCGTGCTTCGGTGTCTAAGCAACCTGTTAACAGAAGTGCCAGCGGAGGTCATGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR GCA 90 bp | TTCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCTTCTTGCTGACTAACTGCTaGTCCCTCCGCGCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: FREGLAMEPKLASNSGSFLLTNC*SLRAFR Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAA...GAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| CDS-3UTR GCA 90 bp | ATGATCTTCTCTGGGGCTTCCTTAGCCTGCAGAAGCTGGGACAAGGCATATCCACCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTC | + |
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Preference number: 4 (lower is better) Translates to: MIFSGASLACRSWDKAYPPKEHS*TLASDF Trigger: GAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGG...TGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCTTCTCCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTC | + |
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Preference number: 4 (lower is better) Translates to: SERVLLWSPNWPQTQGPSPKEHS*TLASDF Trigger: GAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGG...AGAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| CDS-3UTR GCA 90 bp | ATCTGCTGGGGAAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTTGCTGACTAACTGCTaGTCCCTCCGCGCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: ICWGRLESRIEGMIFSGALLTNC*SLRAFR Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAA...AGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS-3UTR GCA 90 bp | ATGATCTTCTCTGGGGCTTCCTTAGCCTGCAGAAGCTGGGACAAGGCATATCCACTCTTGCTGACTAACTaGTGCTCCCTCCGCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MIFSGASLACRSWDKAYPLLLTN*CSLRAF Trigger: GAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAG...TGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR CCA 90 bp | ATCTGCTGGGGAAGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTCATCTGTCCCCCGTTaGGCGAGCCGAAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ICWGRLESRIEGMIFSGASSVPR*ASRRNC Trigger: GCAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGA...AGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCTTCCCCAGCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR TCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACAAACGCCAGCGTCCTaGGGCGGCCCTGCCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQQTPAS*GGPAAD Trigger: ATCGGCGGCAGGGCCGCCTCAGGACGCTGGCGTTTG...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | AGACTGGAATCCAGAATAGAGGGAATGATCTTCTCTGGGGCTTCCTTAGCCTGCTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLESRIEGMIFSGASLACCCVSG*CKPRRR Trigger: CCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCA...GCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCCTCTATTCTGGATTCCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACTGCAGCCCTGACTGCTaGAGGAAGGCTCGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHCSPDC*RKARAA Trigger: GGCTGCCCGAGCCTTCCTGCAGCAGTCAGGGCTGCA...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CCA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTAGGAGAGCAGGGGTCCTaGCCACAACCGCTGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAEEHELRQSQVQHHTQVGEQGS*PQPLAV Trigger: TACTGCCAGCGGTTGTGGCCAGGACCCCTGCTCTCC...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCGAGCCGCCTCAAGCTaGAACAAGGCCCGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYVISQVAEEHELRQSQVRAASS*NKARLL Trigger: CAGCAACCGGGCCTTGTTGCAGCTTGAGGCGGCTCG...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTATCATCTGTCCCCCGTTaGGCGAGCCGAAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VAEEHELRQSQVQHHTQVSSVPR*ASRRNC Trigger: GCAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGA...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHPKEHS*TLASDF Trigger: GAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGG...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGGCTGGGACAATGCCCTaGGGCAGGAGCTGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYVISQVAEEHELRQSQVAGTMP*GRSCFL Trigger: GAGAAAGCAGCTCCTGCCGCAGGGCATTGTCCCAGC...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTAAGCTTTTCTAGGGCCTaGAGCCCTGACTGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAEEHELRQSQVQHHTQVSFSRA*SPDCCR Trigger: CCTGCAGCAGTCAGGGCTGCAGGCCCTAGAAAAGCT...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| 3UTR CAA 72 bp | TTTTTCTTCAGAGAGGGTCTTGCTATGGAGCCCAAATaGGCCTCAAACTCAGGGTCCTTCTGCCTTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFFREGLAMEPK*ASNSGSFCLNP Trigger: GGGGTTAAGGCAGAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
||
| CDS-3UTR TCA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGGACCAGAGAGGTAGGTaGGGAGGTAGGAAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYVISQVAEEHELRQSQVDQRGR*GGRKSL Trigger: CAGCGACTTCCTACCTCCTCACCTACCTCTCTGGTC...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR TCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACGGGCAGCCTCTGGCTaGTGCAAGAATAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQRAASG*CKNSSC Trigger: GCAGCTGCTATTCTTGCATCAGCCAGAGGCTGCCCG...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAATTGCTGACTAACTGCTaGTCCCTCCGCGCCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQLLTNC*SLRAFR Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAA...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYVISQVAEEHELRQSQVCCVSG*CKPRRR Trigger: CCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCA...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAAGTCCAAAAGCAGCAGTaGCAACGTGGGCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQVQKQQ*QRGQSP Trigger: GGGGCTCTGCCCACGTTGGCACTGCTGCTTTTGGAC...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR CCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAAAGCCGAAGGAACTGCTaGACCTCGGCTTCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQSRRNC*TSASPR Trigger: CCTTGGGGAAGCCGAGGTCCAGCAGTTCCTTCGGCT...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR CCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAATCCAGCACAGCCACATaGGGGGACTGGATGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQSSTAT*GDWMQA Trigger: TGCCTGCATCCAGTCCCCCCATGTGGCTGTGCTGGA...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR TCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACCATTTGCTGTCCCATaGCCTCCGCTGGCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQPFAVP*PPLALL Trigger: CAGAAGTGCCAGCGGAGGTCATGGGACAGCAAATGG...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACTCTTGCTGACTAACTaGTGCTCCCTCCGCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQLLLTN*CSLRAF Trigger: GAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAG...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACGCAGGCCTCAGCCACTaGAGACTGCTCAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHAGLSH*RLLRMR Trigger: TCTCATTCTGAGCAGTCTGCAGTGGCTGAGGCCTGC...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAAGGGGCTTCCTTAGCCTaGAGAAGCTGGGACAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQGASLA*RSWDKA Trigger: TGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCC...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CCA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTAGGGAATGATCTTCTCTaGGGCTTCCTTAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAEEHELRQSQVQHHTQVGNDLL*GFLSLQ Trigger: CTGCAGGCTAAGGAAGCCCCAGAGAAGATCATTCCC...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR TCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACCTCACTCTCCACGATaGGGTTCCCCAGTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQPHSPR*GSPVCT Trigger: TGTACACACTGGGGAACCTCATCGTGGAGAGTGAGG...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTAACATCATCCATTCTCTaGACAGTCCCAGCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAEEHELRQSQVQHHTQVTSSIL*TVPAKS Trigger: GGACTTGGCTGGGACTGTGCAGAGAATGGATGATGT...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCAAGGCATATCCAAGTaGTTCCAGCACAGCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHQGISK*FQHSHM Trigger: CATGTGGCTGTGCTGGAAGCACTTGGATATGCCTTG...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACTGCAAGAATAGCAGCTaGAGCAGCTCCAAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHCKNSS*SSSKLW Trigger: CCAGAGTTTGGAGCTGCTGCAGCTGCTATTCTTGCA...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR TCA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCATTGCACAGAACTGTaGGCACCAACATGCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SYVISQVAEEHELRQSQVHCTEL*APTCIL Trigger: CAGTATGCATGTTGGTGCTCACAGTTCTGTGCAATG...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR GCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCTTCTGTTAACAGGTTaGTTAGACACCGAAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHLLLTG*LDTEAR Trigger: CCGTGCTTCGGTGTCTAAGCAACCTGTTAACAGAAG...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CCA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACTTAGCCTGCAGAAGCTaGGACAAGGCATATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VISQVAEEHELRQSQVQHLACRS*DKAYPS Trigger: ACTTGGATATGCCTTGTCCCAGCTTCTGCAGGCTAA...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAAAGCAGCTCCAAACTCTaGCCTACTACTTCGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQSSSKL*PTTSVS Trigger: TGACACCGAAGTAGTAGGCCAGAGTTTGGAGCTGCT...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS-3UTR TCA 90 bp | TACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAAAAGGCAGGCTGTTTCTaGAGGAAGAACTGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVISQVAEEHELRQSQVQKAGCF*RKNWRK Trigger: CTTTCTCCAGTTCTTCCTTCAGAAACAGCCTGCCTT...TTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS TCA 90 bp | GGCCTCCGACTTCTTCCGGGGCGTCTTCCCTCAGCAGCCTCTTGCTaGCTAACTGCTGCTCCCTCCGCGCCTTCCGCAGGGCTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRLLPGRLPSAASC*LTAAPSAPSAGLPP Trigger: GGGAGGCAGCCCTGCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGAAGACGCCCCGGAAGAAGTCGGAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 ENSMUST00000237870.2 |
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| CDS GCA 90 bp | GAGCCGAAGGAACTGCTGGACCTCGGCTTCCCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTCTTCCGGGGCGTCTTCCCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPKELLDLGFPKEHS*TLASDFFRGVFPQQ Trigger: CTGCTGAGGGAAGACGCCCCGGAAGAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTCCAGCAGTTCCTTCGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
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| CDS CCA 90 bp | GACCAGCCTCTCACCTCGGCTTCCCCAAGGAGCACAGCTGCACTCTaGCCTCCGACTTCTTCCGGGGCGTCTTCCCTCAGCAGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DQPLTSASPRSTAAL*PPTSSGASSLSSLL Trigger: CAAGAGGCTGCTGAGGGAAGACGCCCCGGAAGAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTGAGAGGCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
||
| CDS CCA 90 bp | AGGAACTGCTGGACCTCGGCTTCCCCAAGGAGCACAGCTGCACTCTaGCCTCCGACTTCTTCCGGGGCGTCTTCCCTCAGCAGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNCWTSASPRSTAAL*PPTSSGASSLSSLL Trigger: CAAGAGGCTGCTGAGGGAAGACGCCCCGGAAGAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTCCAGCAGTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
||
| CDS GCA 90 bp | GCTCATGAAGGCACCGAGCCGCCTCAAGCTGCAACAAGGCCCGGTTaGTGGTCAAAATCCCAACAAGGGTCCGCATGCTGCCCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHEGTEPPQAATRPG*WSKSQQGSACCPPA Trigger: GGCTGGAGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGTTGCAGCTTGAGGCGGCTCGGTGCCTTCATGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS GCA 90 bp | CGCATGCTGCCCTCCAGCCTGATGAAGGTTTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGGCTGACCAGAGCCTTCTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMLPSSLMKVCCVSG*CKPRRRLTRAFSLS Trigger: GGAGAGGGAGAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGCTGGAGGGCAGCATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
||
| CDS GCA 90 bp | TGCCCTCCAGCCTCCGACCTGATGAAGGTTTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGGCTGACCAGAGCCTTCTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPPASDLMKVCCVSG*CKPRRRLTRAFSLS Trigger: GGAGAGGGAGAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS GCA 90 bp | CAAGGGTCCGCATGCTGCCCTCCAGCCTCCGACCTGATGAAGGTTTaGTGTGTGTCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSACCPPASDLMKV*CVSGCCKPRRRLTR Trigger: TCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS GCA 90 bp | CCTCCAGCCTCCGACCTGATGAAGGTTTGCTGTGTGTCAGGGTGCTaGAAGCCTCGACGAAGGCTGACCAGAGCCTTCTCCCTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPASDLMKVCCVSGC*KPRRRLTRAFSLSF Trigger: AAAGGAGAGGGAGAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS GCA 90 bp | ACAAGGCCCGGTTGCTGGTCAAAATCCCAACAAGGGTCCGCATGCTaGCCTCCAGCCTCCGACCTGATGAAGGTTTGCTGTGTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRPGCWSKSQQGSAC*PPASDLMKVCCVSG Trigger: CCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS GCA 90 bp | GCAACAAGGCCCGGTTGCTGGTCAAAATCCCAACAAGGGTCCGCATaGTGCCCTCCAGCCTCCGACCTGATGAAGGTTTGCTGTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATRPGCWSKSQQGSA*CPPASDLMKVCCVS Trigger: TGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCACGGCCTCACTCTCCACGATGAGGTTCCCCAGTGTGTACAGACACAGTCCCTCAGCAGCCTCTaGCTGACTAACTGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHGLTLHDEVPQCVQTQSLSSL*LTNCCS Trigger: GGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGA...CTGTGTCTGTACACACTGGGGAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGCTGCTTTCTCACGGCCTCACTCTCCACGATGAGGTTCCCCAGTGTGTACGACCTGATGAAGGTTaGCTGTGTGTCAGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QELLSHGLTLHDEVPQCVRPDEG*LCVRVL Trigger: CAGCACCCTGACACACAGCAAACCTTCATCAGGTCG...TACACACTGGGGAACCTCATCGTGGAGAGTGAGGCCGTGAGAAAGCAGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR CAA 90 bp | ATGATCTTCTCTGGGGCTTCCTTAGCCTGCAGAAGCTGGGACAAGGCATATCCATTCATCTGTCCCCCGTaGGGCGAGCCGAAGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: MIFSGASLACRSWDKAYPFICPP*GEPKEL Trigger: CAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGAA...TGGATATGCCTTGTCCCAGCTTCTGCAGGCTAAGGAAGCCCCAGAGAAGATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS-3UTR CAA 90 bp | TTCAGAGAGGGTCTTGCTATGGAGCCCAAATTGGCCTCAAACTCAGGGTCCTTCTCCCTCAGCAGCCTCTaGCTGACTAACTGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FREGLAMEPKLASNSGSFSLSSL*LTNCCS Trigger: GGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGA...GAAGGACCCTGAGTTTGAGGCCAATTTGGGCTCCATAGCAAGACCCTCTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTATTCATCTGTCCCCCGTaGGGCGAGCCGAAGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: VAEEHELRQSQVQHHTQVFICPP*GEPKEL Trigger: CAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGAA...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTATCCCTCAGCAGCCTCTaGCTGACTAACTGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VAEEHELRQSQVQHHTQVSLSSL*LTNCCS Trigger: GGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGA...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CAA 90 bp | GTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACCACACTCAGGTAGTCTCTGAGCTCCATTaGCTGTCCCATGACCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VAEEHELRQSQVQHHTQVVSELH*LSHDLR Trigger: GCGGAGGTCATGGGACAGCAAATGGAGCTCAGAGAC...TACCTGAGTGTGGTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS GCA 90 bp | ACTGTGAGCACCAACATGCATACTGCATTTGATAGTGGCAACAACTaGAAGAGCGGCTCGATCAGATCCAGAGAGAGCAAGGAGGTACAA | + |
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Preference number: 5 (lower is better) Translates to: TVSTNMHTAFDSGNN*KSGSIRSRESKEVQ Trigger: TTGTACCTCCTTGCTCTCTCTGGATCTGATCGAGCCGCTCTTGCAGTTGTTGCCACTATCAAATGCAGTATGCATGTTGGTGCTCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CAA 90 bp | TCGTACGTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCTGTTTGCAGTGAGGTaGTTGAGGAGCCAGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SYVISQVAEEHELRQSQVLFAVR*LRSQRP Trigger: GGGCCTCTGGCTCCTCAACAACCTCACTGCAAACAG...CACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGACGTACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS-3UTR CAA 90 bp | GTCATTAGCCAAGTTGCTGAAGAGCATGAACTAAGACAATCTCAAGTGCAACACGTAAGGAGTACAGCATaGTTGACCTGGCTGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: VISQVAEEHELRQSQVQHVRSTA*LTWLQM Trigger: CATCTGCAGCCAGGTCAACAATGCTGTACTCCTTAC...GTGTTGCACTTGAGATTGTCTTAGTTCATGCTCTTCAGCAACTTGGCTAATGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS GCA 72 bp | GCGTCTTCCCTCAGCAGCCTCTTGCTGACTAACTGCTaGTCCCTCCGCGCCTTCCGCAGGGCTGCCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ASSLSSLLLTNC*SLRAFRRAASR Trigger: GCGGGAGGCAGCCCTGCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGAAGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 ENSMUST00000237870.2 |
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| CDS GCA 72 bp | GGGGCGTCTTCCCTCAGCAGCCTCTTGCTGACTAACTaGTGCTCCCTCCGCGCCTTCCGCAGGGCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GASSLSSLLLTN*CSLRAFRRAAS Trigger: GGAGGCAGCCCTGCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGAAGACGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 ENSMUST00000237870.2 |
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| CDS CAA 90 bp | CTCTGGCCTCCGACTTCTTCCGGGGCGTCTTCCCTCAGCAGCCTCTaGCTGACTAACTGCTGCTCCCTCCGCGCCTTCCGCAGGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LWPPTSSGASSLSSL*LTNCCSLRAFRRAA Trigger: GGCAGCCCTGCGGAAGGCGCGGAGGGAGCAGCAGTTAGTCAGCAAGAGGCTGCTGAGGGAAGACGCCCCGGAAGAAGTCGGAGGCCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 ENSMUST00000237870.2 |
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| CDS GCA 72 bp | CCAGCCTCTCACCTCGGCTTCCCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTCTTCCGGGGCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PASHLGFPKEHS*TLASDFFRGVF Trigger: GAAGACGCCCCGGAAGAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTGAGAGGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237870.2 |
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| CDS GCA 72 bp | GAACTGCTGGACCTCGGCTTCCCCAAGGAGCACAGCTaGACTCTGGCCTCCGACTTCTTCCGGGGCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELLDLGFPKEHS*TLASDFFRGVF Trigger: GAAGACGCCCCGGAAGAAGTCGGAGGCCAGAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTCCAGCAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
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| CDS CCA 72 bp | TCATCTGTCCCCCGTTGGGCGAGCCGAAGGAACTGCTaGACCTCGGCTTCCCCAAGGAGCACAGCTGCACTC | + |
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Preference number: 6 (lower is better) Translates to: SSVPRWASRRNC*TSASPRSTAAL Trigger: GAGTGCAGCTGTGCTCCTTGGGGAAGCCGAGGTCCAGCAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
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| CDS GCA 72 bp | GGCACCGAGCCGCCTCAAGCTGCAACAAGGCCCGGTTaGTGGTCAAAATCCCAACAAGGGTCCGCATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GTEPPQAATRPG*WSKSQQGSACC Trigger: GCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGTTGCAGCTTGAGGCGGCTCGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS CAA 90 bp | ACAAGGGTCCGCATGCTGCCCTCCAGCCTCCGACCTGATGAAGGTTaGCTGTGTGTCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: TRVRMLPSSLRPDEG*LCVRVLQASTKADQ Trigger: CTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS GCA 72 bp | GCATGCTGCCCTCCAGCCTCCGACCTGATGAAGGTTTaGTGTGTGTCAGGGTGCTGCAAGCCTCGACGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ACCPPASDLMKV*CVSGCCKPRRR Trigger: CCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS CCA 72 bp | AGAGCCTTCTCCCTCTCCTTTTCATCTGTCCCCCGTTaGGCGAGCCGAAGGAACTGCTGGACCTCGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RAFSLSFSSVPR*ASRRNCWTSAS Trigger: GGAAGCCGAGGTCCAGCAGTTCCTTCGGCTCGCCCAACGGGGGACAGATGAAAAGGAGAGGGAGAAGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
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| CDS CCA 72 bp | ACCGAGCCGCCTCAAGCTGCAACAAGGCCCGGTTGCTaGTCAAAATCCCAACAAGGGTCCGCATGCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TEPPQAATRPGC*SKSQQGSACCP Trigger: AGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGTTGCAGCTTGAGGCGGCTCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS CCA 72 bp | AGCCAGTGTGTTAAGCACGCAGGAGAGCAGGGGTCCTaGCCACAACCGCTGGCAGTAAGCTGGACCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SQCVKHAGEQGS*PQPLAVSWTLL Trigger: GAGAAGGGTCCAGCTTACTGCCAGCGGTTGTGGCCAGGACCCCTGCTCTCCTGCGTGCTTAACACACTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS CAA 72 bp | AGGCACCGAGCCGCCTCAAGCTGCAACAAGGCCCGGTaGCTGGTCAAAATCCCAACAAGGGTCCGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: RHRAASSCNKAR*LVKIPTRVRML Trigger: CAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGGCCTTGTTGCAGCTTGAGGCGGCTCGGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS CAA 72 bp | CGCATGCTGCCCTCCAGCCTCCGACCTGATGAAGGTTaGCTGTGTGTCAGGGTGCTGCAAGCCTCGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: RMLPSSLRPDEG*LCVRVLQASTK Trigger: CTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS TCA 72 bp | CCTGACTGCTGCAGGAAGGCTCGGGCAGCCTCTGGCTaGTGCAAGAATAGCAGCTGCAGCAGCTCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: PDCCRKARAASG*CKNSSCSSSKL Trigger: GAGTTTGGAGCTGCTGCAGCTGCTATTCTTGCATCAGCCAGAGGCTGCCCGAGCCTTCCTGCAGCAGTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS GCA 72 bp | CCCTCCAGCCTGATGAAGGTTTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGGCTGACCAGAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSSLMKVCCVSG*CKPRRRLTRAF Trigger: GAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGCTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007046.9 |
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| CDS GCA 72 bp | GCCTCCGACCTGATGAAGGTTTGCTGTGTGTCAGGGTaGTGCAAGCCTCGACGAAGGCTGACCAGAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASDLMKVCCVSG*CKPRRRLTRAF Trigger: GAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGCAAACCTTCATCAGGTCGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS GCA 72 bp | CCCGGTTGCTGGTCAAAATCCCAACAAGGGTCCGCATaGTGCCCTCCAGCCTCCGACCTGATGAAGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: PGCWSKSQQGSA*CPPASDLMKVC Trigger: GCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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| CDS TCA 72 bp | GCTGTGTGTCAGGGTGCTGCAAGCCTCGACGAAGGCTaGCCAGAGCCTTCTCCCTCTCCTTTTCATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AVCQGAASLDEG*PEPSPSPFHLS Trigger: GGACAGATGAAAAGGAGAGGGAGAAGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGACACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007046.9 ENSMUST00000237727.2 |
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| CDS GCA 72 bp | GGTTGCTGGTCAAAATCCCAACAAGGGTCCGCATGCTaGCCTCCAGCCTCCGACCTGATGAAGGTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GCWSKSQQGSAC*PPASDLMKVCC Trigger: ACAGCAAACCTTCATCAGGTCGGAGGCTGGAGGGCAGCATGCGGACCCTTGTTGGGATTTTGACCAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237727.2 |
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