Pregenerated sensors for TMCO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038497Ensembl transcript IDs: ENSMUST00000045229.7, ENSMUST00000210600.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGGAAGCCAGCAGAGAGGCGCAGCAGCAGACCGTCTCGGGACTaGAACCCCCGAAGGATCCTTGCCCCACAGCCTGTCGTCCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: AGKPAERRSSRPSRD*NPRRILAPQPVVLG Trigger: CCCGAGGACGACAGGCTGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGCCTCTCTGCTGGCTTCCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 90 bp | AGCAAGCATGAGGGCGCTGCCTCTTGGCCCGTGTTACTCTGTCTCTaGTGGGAAGCCAGCAGAGAGGCGCAGCAGCAGACCGTCTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: SKHEGAASWPVLLCL*WEASREAQQQTVSG Trigger: TCCCGAGACGGTCTGCTGCTGCGCCTCTCTGCTGGCTTCCCAGCAGAGACAGAGTAACACGGGCCAAGAGGCAGCGCCCTCATGCTTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 90 bp | AAGCATGAGGGCGCTGCCTCTTGGCCCGTGTTACTCTGTCTCTGCTaGGAAGCCAGCAGAGAGGCGCAGCAGCAGACCGTCTCGGGACTG | + |
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Preference number: 1 (lower is better) Translates to: KHEGAASWPVLLCLC*EASREAQQQTVSGL Trigger: CAGTCCCGAGACGGTCTGCTGCTGCGCCTCTCTGCTGGCTTCCCAGCAGAGACAGAGTAACACGGGCCAAGAGGCAGCGCCCTCATGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 90 bp | AGGAGAGTCTTTGAAATAGCAAGCAAGCATGAGGGCGCTGCCTCTTaGCCCGTGTTACTCTGTCTCTGCTGGGAAGCCAGCAGAGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: RRVFEIASKHEGAAS*PVLLCLCWEASREA Trigger: CGCCTCTCTGCTGGCTTCCCAGCAGAGACAGAGTAACACGGGCCAAGAGGCAGCGCCCTCATGCTTGCTTGCTATTTCAAAGACTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR TCA 90 bp | TATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTTaGAATCCTCTATGCAGCATGCAGCCCCAGAGCAGAAGGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: YKQAPGTGLSALLTT*NPLCSMQPQSRRTE Trigger: CTCTGTCCTTCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTCAAGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 90 bp | TCAGCTCCTAGCACCCACATGGCTGCTAACTGTAACTCCAGTCCCTaGGGATCTGGCACCCTCATATACACACATACATGTAGGCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SAPSTHMAANCNSSP*GSGTLIYTHTCRQR Trigger: TCTTTGCCTACATGTATGTGTGTATATGAGGGTGCCAGATCCCCAGGGACTGGAGTTACAGTTAGCAGCCATGTGGGTGCTAGGAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 90 bp | TCAGGTGCTACAAGTTTAATCCCCAATACAACAGTGTTGGAAGGGTaGGCTCAGAAGAGATTCAATCAGAGAGAACTTGCCCTCATGGGT | + |
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Preference number: 1 (lower is better) Translates to: SGATSLIPNTTVLEG*AQKRFNQRELALMG Trigger: ACCCATGAGGGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGTTGTATTGGGGATTAAACTTGTAGCACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 90 bp | GTGGGCTCAGAAGAGATTCAATCAGAGAGAACTTGCCCTCATGGGTaGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VGSEEIQSERTCPHG*VNYINYKQAPGTGL Trigger: CAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATGAGGGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 90 bp | AGTGTTGGAAGGGTGGGCTCAGAAGAGATTCAATCAGAGAGAACTTaGCCTCATGGGTGGGTTAATTACATTAATTATAAACAAGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: SVGRVGSEEIQSERT*PHGWVNYINYKQAP Trigger: AGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATGAGGGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCGGGCACTCATTGCTCTaGGAAAGGACCCAGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: HHGETDHAPQESPVKGQVGHSLL*ERTQVW Trigger: CCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCC...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR TCA 90 bp | GAAATCCTCTATGCAGCATGCAGCCCCAGAGCAGAAGGACAGAGCCTTCCCCCTCACCAGGAGCACAGGTaGTGCTCATACAGACATGTA | + |
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Preference number: 2 (lower is better) Translates to: EILYAACSPRAEGQSLPPHQEHR*CSYRHV Trigger: TACATGTCTGTATGAGCATCACCTGTGCTCCTGGTG...AGGGGGAAGGCTCTGTCCTTCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTTGGTTCCCAGCACTCACACGTGTTACTCTGTCTCTaGTGGGAAGCCAGCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KGTHCSGKGPRFGSQHSHVLLCL*WEASRE Trigger: CTCTCTGCTGGCTTCCCAGCAGAGACAGAGTAACAC...GTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTAGGCTGGAGAGACAGTTaGGGGCAGTTAAGGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLGWRDS*GQLRAL Trigger: GAGTGCCCTTAACTGCCCTCAACTGTCTCTCCAGCC...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTATTACTCTGTCTCTGCTaGGAAGCCAGCAGAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLLLCLC*EASREA Trigger: CGCCTCTCTGCTGGCTTCCCAGCAGAGACAGAGTAA...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | GATGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCATTGACTGCTCTTCTGAAGTGGAAAGATGGCTCATaGGTTAGGAGACTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: DGAGEMAQWLRALTALLKWKDGS*VRRLAA Trigger: AGCAGCCAGTCTCCTAACCCATGAGCCATCTTTCCA...CTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | TACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTCAGTCCCTGGGGATCTaGCACCCTCATATACACACA | + |
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Preference number: 2 (lower is better) Translates to: YINYKQAPGTGLSALLTTQSLGI*HPHIHT Trigger: TGTGTGTATATGAGGGTGCCAGATCCCCAGGGACTG...AGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CAA 90 bp | CCCCAGAGTTCAGGTGCTACAAGTTTAATCCCCAATACAACAGTGTaGGAAGGGTGGGCTCAGAAGAGATTCAATCAGAGAGAACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PQSSGATSLIPNTTV*EGWAQKRFNQRELA Trigger: GGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGTTGTATTGGGGATTAAACTTGTAGCACCTGAACTCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTGGAGAGATGGCTCAGTaGTTAAGAGCATTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SVPLPQHLWSICPALKTSGEMAQ*LRALTA Trigger: AGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCC...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR TCA 90 bp | GCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTGAGCCTTCCCCCTTTTaGCCTTGTGCTTCTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: AHIKYIITPYTLSLYLSIEPSPF*PCASQH Trigger: ATGCTGAGAAGCACAAGGTCAAAAGGGGGAAGGCTC...AATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTCAATCAGAGAGAACTTaGCCTCATGGGTGGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SVPLPQHLWSICPALKTSQSERT*PHGWVN Trigger: ATTAACCCACCCATGAGGGCAAGTTCTCTCTGATTG...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | CATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTGAAAGGACCCAGGTTTaGTTCCCAGCACTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: HNHTLYSVPLPQHLWSICERTQV*FPALTQ Trigger: CTGTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTC...ACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTACAGTGTTGGAAGGGTaGGCTCAGAAGAGATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: SVPLPQHLWSICPALKTSTVLEG*AQKRFN Trigger: ATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGT...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCAGGTGATTGTAAAATaGAGTGTTAAAACTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: WVNYINYKQAPGTGLSALQVIVK*SVKTLY Trigger: GTACAGAGTTTTAACACTGCATTTTACAATCACCTG...GAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CAA 90 bp | TCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTaGTCCAGCTCTGAAAACCAGTATATACAGAGAAATTGTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SHLILCPSTSAFMVN*SSSENQYIQRNCLE Trigger: CTCTAAACAATTTCTCTGTATATACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR TCA 90 bp | ATATGCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGTCTTTAATAACTATATaGTGGGGCTGGAGAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: ICTHKIHNHTLYSVPLPQSLITI*WGWRDG Trigger: GCCATCTCTCCAGCCCCATCATATAGTTATTAAAGA...CTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR TCA 90 bp | ATATGCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGCAATTTGTCCAGCTCTaGAAACCAGTATATACAGAG | + |
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Preference number: 2 (lower is better) Translates to: ICTHKIHNHTLYSVPLPQQFVQL*KPVYTE Trigger: CTCTGTATATACTGGTTTTCAGAGCTGGACAAATTG...CTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CAA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCGGAAAGGACCCAGGTTaGGTTCCCAGCACTCACACA | + |
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Preference number: 3 (lower is better) Translates to: HHGETDHAPQESPVKGQVGKDPG*VPSTHT Trigger: TGTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCC...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR TCA 72 bp | GCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTTaGAATCCTCTATGCAGCATGCAGCCCCAGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: APGTGLSALLTT*NPLCSMQPQSR Trigger: TCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTCAAGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR TCA 72 bp | CCAACAGATTATCCAGCTACAGCACCATGGAGAGACTaGCCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: PTDYPATAPWRD*PRPSGEPCQGS Trigger: TGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTGCTGTAGCTGGATAATCTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 72 bp | CTGGAGAGACAGTTGAGGGCAGTTAAGGGCACTCATTaGTCTGGGAAAGGACCCAGGTTTGGTTCCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: LERQLRAVKGTH*SGKGPRFGSQH Trigger: GTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAACTGCCCTCAACTGTCTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 72 bp | TTTGAAATAGCAAGCAAGCATGAGGGCGCTGCCTCTTaGCCCGTGTTACTCTGTCTCTGCTGGGAAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: FEIASKHEGAAS*PVLLCLCWEAS Trigger: GCTGGCTTCCCAGCAGAGACAGAGTAACACGGGCCAAGAGGCAGCGCCCTCATGCTTGCTTGCTATTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CAA 90 bp | TACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTGGGCTGGAGAGACAGTaGAGGGCAGTTAAGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: YINYKQAPGTGLSALLTTGLERQ*RAVKGT Trigger: AGTGCCCTTAACTGCCCTCAACTGTCTCTCCAGCCC...AGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 72 bp | AGCACCCACATGGCTGCTAACTGTAACTCCAGTCCCTaGGGATCTGGCACCCTCATATACACACATACATGT | + |
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Preference number: 3 (lower is better) Translates to: STHMAANCNSSP*GSGTLIYTHTC Trigger: ACATGTATGTGTGTATATGAGGGTGCCAGATCCCCAGGGACTGGAGTTACAGTTAGCAGCCATGTGGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CAA 90 bp | GAAATCCTCTATGCAGCATGCAGCCCCAGAGCAGAAGGACAGAGCCTTCCCCCTGATAAAATGAGATTTTaGGAGGCTGGAAAGATGGCT | + |
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Preference number: 3 (lower is better) Translates to: EILYAACSPRAEGQSLPPDKMRF*EAGKMA Trigger: AGCCATCTTTCCAGCCTCCAAAAATCTCATTTTATC...AGGGGGAAGGCTCTGTCCTTCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAGAGCATTGACTaGTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSVVKSID*SSEGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CAA 90 bp | CATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTAGAGCCTTCCCCCTTTaGACCTTGTGCTTCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HNHTLYSVPLPQHLWSICRAFPL*TLCFSA Trigger: TGCTGAGAAGCACAAGGTCAAAAGGGGGAAGGCTCT...ACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR-3UTR CAA 90 bp | CATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCCAATACAACAGTGTaGGAAGGGTGGGCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: HNHTLYSVPLPQHLWSICPNTTV*EGWAQK Trigger: CTTCTGAGCCCACCCTTCCAACACTGTTGTATTGGG...ACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 72 bp | CTATTCCGTGAATGTTTCCAGACCCCAGAGTTCAGGTaGTACAAGTTTAATCCCCAATACAACAGTGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LFRECFQTPEFR*YKFNPQYNSVG Trigger: TCCAACACTGTTGTATTGGGGATTAAACTTGTAGCACCTGAACTCTGGGGTCTGGAAACATTCACGGAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 72 bp | ACAAGTTTAATCCCCAATACAACAGTGTTGGAAGGGTaGGCTCAGAAGAGATTCAATCAGAGAGAACTTGCC | + |
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Preference number: 3 (lower is better) Translates to: TSLIPNTTVLEG*AQKRFNQRELA Trigger: GGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGTTGTATTGGGGATTAAACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 72 bp | CACACCTTATACTCTGTCCCTCTACCTCAGCATTTATaGTCAATTTGTCCAGCTCTGAAAACCAGTATATAC | + |
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Preference number: 3 (lower is better) Translates to: HTLYSVPLPQHL*SICPALKTSIY Trigger: GTATATACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR GCA 72 bp | AGGGTGGGCTCAGAAGAGATTCAATCAGAGAGAACTTaGCCTCATGGGTGGGTTAATTACATTAATTATAAA | + |
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Preference number: 3 (lower is better) Translates to: RVGSEEIQSERT*PHGWVNYINYK Trigger: TTTATAATTAATGTAATTAACCCACCCATGAGGGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CCA 72 bp | GAAGAGATTCAATCAGAGAGAACTTGCCCTCATGGGTaGGTTAATTACATTAATTATAAACAAGCCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: EEIQSERTCPHG*VNYINYKQAPG Trigger: TCCAGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATGAGGGCAAGTTCTCTCTGATTGAATCTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTGCCCCACAGCCTCAGGAGCCCGGTaGGCCTCCTGCAGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AQQQTVSGLEPPKDPCPTASGAR*ASCSCP Trigger: TGGACAGCTGCAGGAGGCTCACCGGGCTCCTGAGGC...TGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTGCCCCACAGAAATGAAGACACTCTaGGTGGGTCTGATCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AQQQTVSGLEPPKDPCPTEMKTL*VGLIRR Trigger: CCTGCGGATCAGACCCACTCAGAGTGTCTTCATTTC...TGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTGCCCCACATCGTCATATTCTGCTTaGAGCTGGCCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AQQQTVSGLEPPKDPCPTSSYSA*SWPPPP Trigger: AGGAGGAGGAGGCCAGCTCCAAGCAGAATATGACGA...TGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | AGCCAGCAGAGAGGCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGAATGGAGCCCTATGGATaGGAAGAAGATGATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQQRGAAADRLGTGTPEGMEPYG*EEDDGQ Trigger: CTGGCCATCATCTTCTTCGCATCCATAGGGCTCCAT...TCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGCCTCTCTGCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCTCGAATGTGTGCACCTaGAAGAGCTTCTCCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: HHGETDHAPQESPVKGQVSNVCT*KSFSSP Trigger: GGGCGAGGAGAAGCTCTTCCAGGTGCACACATTCGA...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCGTGGTGGTCTGCGCGTaGGATAGTAGAATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HHGETDHAPQESPVKGQVVVVCA*DSRISG Trigger: CCCAGAGATTCTACTATCCCACGCGCAGACCACCAC...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGTTGAGGGCAGTTAAGGGCACTCATTGCTCTGGGAAAGGACCCAGGGCCCACTGTTTCCTCTaGGTGGCAGTGGCGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERQLRAVKGTHCSGKGPRAHCFL*VAVAPF Trigger: GAAGGGCGCCACTGCCACTCAGAGGAAACAGTGGGC...CCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAACTGCCCTCAACTGTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CAA 72 bp | AGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTaGAAATCCTCTATGCAGCATGCAGCCCCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPWNWAVCPPHY*KSSMQHAAPEQ Trigger: CTGCTCTGGGGCTGCATGCTGCATAGAGGATTTCAAGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCTTGGTCAGAATGTACTaGTTGTTCTGGGAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HHGETDHAPQESPVKGQVLVRMY*LFWESM Trigger: CATCGACTCCCAGAACAACCAGTACATTCTGACCAA...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGTTGAGGGCAGTTAAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTGGATGCGAAGAAGATaGTGGCCAGGAAGTCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERQLRAVKGTHCSGKGPRWMRRR*WPGSHG Trigger: TCCGTGACTTCCTGGCCATCATCTTCTTCGCATCCA...CCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAACTGCCCTCAACTGTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | GAAATCCTCTATGCAGCATGCAGCCCCAGAGCAGAAGGACAGAGCCTTCCCCCTTCTCTTTGTTCCCCTTaGTCTCCAGGTGCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EILYAACSPRAEGQSLPPSLCSP*SPGAAF Trigger: GAAAGCTGCACCTGGAGAGCAAGGGGAACAAAGAGA...AGGGGGAAGGCTCTGTCCTTCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCGAGAGACTCTTGTTTTaGTGTTGCATGTTTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHGETDHAPQESPVKGQVERLLF*CCMFFR Trigger: CCTGAAAAACATGCAACATCAAAACAAGAGTCTCTC...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | ACAGTGTTGGAAGGGTGGGCTCAGAAGAGATTCAATCAGAGAGAACTTGCCCTCCAGGAAGGTGAAGGCTaGCACTCCCAGGACGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEGWAQKRFNQRELALQEGEG*HSQDED Trigger: ATCCTCGTCCTGGGAGTGTCAGCCTTCACCTTCCTG...GAGGGCAAGTTCTCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGAGACTGACCACGCCCCTCAGGAGAGCCCTGTCAAGGGTCAGGTCTCATTCAGCTCTTTCTaGAAAATCTCGAATGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHGETDHAPQESPVKGQVSFSSF*KISNVC Trigger: GCACACATTCGAGATTTTCCAGAAAGAGCTGAATGA...GACCTGACCCTTGACAGGGCTCTCCTGAGGGGCGTGGTCAGTCTCTCCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GAAATCCTCTATGCAGCATGCAGCCCCAGAGCAGAAGGACAGAGCCTTCCCCCTTTCAGGGCTTCCACTTaGTGTTTTTCTGCGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EILYAACSPRAEGQSLPPFRAST*CFSAAR Trigger: TCTTGCCGCAGAAAAACACCAAGTGGAAGCCCTGAA...AGGGGGAAGGCTCTGTCCTTCTGCTCTGGGGCTGCATGCTGCATAGAGGATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
||
| 3UTR CAA 72 bp | TTAAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTaGGTTCCCAGCACTCACACAGCATCTCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRALIALGKDPG*VPSTHTASHSH Trigger: GTGACTGTGAGATGCTGTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | AAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTTGGTTCCCAGCACTCACACTCCTTTATGAAGTGGTaGTCTGCGCGTGGGATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGTHCSGKGPRFGSQHSHSFMKW*SARGIV Trigger: TACTATCCCACGCGCAGACCACCACTTCATAAAGGA...GTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GATGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCATTGACTGCTCTTCTGAAGATCCACTTGATGTACTaGCTGCTCCTCGGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DGAGEMAQWLRALTALLKIHLMY*LLLGRM Trigger: CATCCTGCCGAGGAGCAGCCAGTACATCAAGTGGAT...CTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGTTGAGGGCAGTTAAGGGCACTCATTGCTCTGGGAAAGGACCCAGGCATTCTTCAGTTTGTTaGGGACCACATTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQLRAVKGTHCSGKGPRHSSVC*GPHSSA Trigger: GGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATG...CCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAACTGCCCTCAACTGTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | TACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTCCCAGCTGCACGTCTTaGATCACCAGCATGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YINYKQAPGTGLSALLTTPSCTS*ITSMPS Trigger: GCTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGG...AGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | AAGAGCATTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATTCCTCGGTGACCATGTaGCCTTGGGAAGAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSIDCSSEGPEFKSQQPHSSVTM*PWEETS Trigger: GCTGGTCTCTTCCCAAGGGCACATGGTCACCGAGGA...ATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | CATGGGTGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTCCTCGCCCGAAAGGCTaGTGTCCTTCTCCACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGWVNYINYKQAPGTGLSPRPKG*CPSPRL Trigger: GAGCCGTGGAGAAGGACACCAGCCTTTCGGGCGAGG...AGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTATATTCTGCTTGGAGCTaGCCTCCTCCTCCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLYSAWS*PPPPPL Trigger: GAGTGGAGGAGGAGGAGGCCAGCTCCAAGCAGAATA...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTAAGCATCCAAGCTCCATaGAGACGTCCAGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLSIQAP*RRPAAL Trigger: CAGAGCTGCTGGACGTCTCCATGGAGCTTGGATGCT...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | TATTCCGTGAATGTTTCCAGACCCCAGAGTTCAGGTGCTACAAGTTTAATCCCCGTGACCATGTGCCCTTaGGAAGAGACCAGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSVNVSRPQSSGATSLIPVTMCP*EETSAP Trigger: TGGAGCGCTGGTCTCTTCCCAAGGGCACATGGTCAC...GGGGATTAAACTTGTAGCACCTGAACTCTGGGGTCTGGAAACATTCACGGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CAA 72 bp | GATGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCATaGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGAGEMAQWLRA*TALLKVLSSNP Trigger: GGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | TGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCTGCTCCTCGGCAGGATaGGAGACAAGACCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WVNYINYKQAPGTGLSALCSSAG*ETRPAL Trigger: CAGTGCTGGTCTTGTCTCTCATCCTGCCGAGGAGCA...GAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | TATTCCGTGAATGTTTCCAGACCCCAGAGTTCAGGTGCTACAAGTTTAATCCCCCGGATACGATCCACTTaGTGTACTGGCTGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YSVNVSRPQSSGATSLIPRIRST*CTGCSS Trigger: CGAGGAGCAGCCAGTACATCAAGTGGATCGTATCCG...GGGGATTAAACTTGTAGCACCTGAACTCTGGGGTCTGGAAACATTCACGGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | TACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTGGGCGAGTAAGAGGCTaGGTGTGGTCACACTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YINYKQAPGTGLSALLTTGRVRG*VWSHLG Trigger: TCCTAAGTGTGACCACACTCAGCCTCTTACTCGCCC...AGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | AAGAGCATTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATAGAGCCTCCAGCCGCTaGTTGCTGCTCTCTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KSIDCSSEGPEFKSQQPHRASSR*LLLSFM Trigger: CATGAAAGAGAGCAGCAAGCAGCGGCTGGAGGCTCT...ATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | CATGGGTGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTCCTCTCTGGAGAGGATaGCTGCTCTCCGTGCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGWVNYINYKQAPGTGLSPLWRG*LLSVLD Trigger: GTCGAGCACGGAGAGCAGGCATCCTCTCCAGAGAGG...AGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGTTGAGGGCAGTTAAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTTGCAGTCCGTAGATaGCCTGGAAGATCGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERQLRAVKGTHCSGKGPRFAVRR*PGRSNF Trigger: AAAATTCGATCTTCCAGGCCATCTACGGACTGCAAA...CCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTTAACTGCCCTCAACTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTATGCTCTCTTTCATGTTaGCCACGTCTCTGTAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLCSLSC*PRLCSR Trigger: GCGACTACAGAGACGTGGTCAACATGAAAGAGAGCA...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTAATACTGTTCAGTCCTaGAGGCCCCAGAAGCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPQHLWSICPALKTSNTVQS*RPQKHA Trigger: GGCGTGCTTCTGGGGCCTTCAGGACTGAACAGTATT...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTTCAGCATCAGGAAGGTaGAGGCTGACACTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPQHLWSICPALKTSSASGR*RLTLPG Trigger: TCCTGGGAGTGTCAGCCTTCACCTTCCTGATGCTGA...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTCGTGCTCGGCAGCACTaGCTATCAGGTGAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPQHLWSICPALKTSRARQH*LSGERR Trigger: CCTTCTTTCACCTGATAGCCAGTGCTGCCGAGCACG...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | AAGAGCATTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATAAGGTGGGGAACACATaGAGCCCTATGGATGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSIDCSSEGPEFKSQQPHKVGNT*SPMDAK Trigger: CTTCGCATCCATAGGGCTCCATGTGTTCCCCACCTT...ATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTCGTAGGCAGACCTATTaGTGTACACAGCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPQHLWSICPALKTSRRQTY*CTQPAT Trigger: TGTGGCTGGCTGTGTACAGCAATAGGTCTGCCTACG...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | CATGGGTGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTTGGATACCAGGGGTGTaGTCGACAAGGACAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGWVNYINYKQAPGTGLSWIPGV*STRTDR Trigger: CCTGTCTGTCCTTGTCGAGCACACCCCTGGTATCCA...AGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCACCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | GATGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCATTGACTGCTCTTCTGAAGGGATCTCGTCAAGCATaGAGAGACTCTTGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGAGEMAQWLRALTALLKGSRQA*RDSCFD Trigger: ATCAAAACAAGAGTCTCTCCATGCTTGACGAGATCC...CTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | AAGAGCATTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGCCTGTATGAGAGTTaGCATGACGGCAATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSIDCSSEGPEFKSQQPHGLYES*HDGNEQ Trigger: CTGTTCATTGCCGTCATGCCAACTCTCATACAGGCC...ATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAATGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | TATTCCGTGAATGTTTCCAGACCCCAGAGTTCAGGTGCTACAAGTTTAATCCCCATGTACTGGTTGTTCTaGGAGTCGATGAGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSVNVSRPQSSGATSLIPMYWLF*ESMSML Trigger: CAGCATGCTCATCGACTCCCAGAACAACCAGTACAT...GGGGATTAAACTTGTAGCACCTGAACTCTGGGGTCTGGAAACATTCACGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CCA 90 bp | TATTCCGTGAATGTTTCCAGACCCCAGAGTTCAGGTGCTACAAGTTTAATCCCCCATAGATCACAAAGGTaGGGAACACATGGAGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSVNVSRPQSSGATSLIPHRSQR*GTHGAL Trigger: TAGGGCTCCATGTGTTCCCCACCTTTGTGATCTATG...GGGGATTAAACTTGTAGCACCTGAACTCTGGGGTCTGGAAACATTCACGGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | TACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCCTCACTACTCACTTGGTGTTTTTCTaGGGCAAGAAGTTCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: YINYKQAPGTGLSALLTTHLVFF*GKKFHI Trigger: TATGTGGAACTTCTTGCCGCAGAAAAACACCAAGTG...AGTAGTGAGGAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| 3UTR CAA 72 bp | TCAGGTGCTACAAGTTTAATCCCCAATACAACAGTGTaGGAAGGGTGGGCTCAGAAGAGATTCAATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGATSLIPNTTV*EGWAQKRFNQR Trigger: TCTCTGATTGAATCTCTTCTGAGCCCACCCTTCCAACACTGTTGTATTGGGGATTAAACTTGTAGCACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR TCA 90 bp | GCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTCCTTCTCCACGGCTCTaGTGGCATTCTTCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHIKYIITPYTLSLYLSIPSPRL*WHSSVC Trigger: ACAAACTGAAGAATGCCATCAGAGCCGTGGAGAAGG...AATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR GCA 90 bp | ATATGCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGCTCCACTCTCAGAACTaGCTCAAAGTTGACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICTHKIHNHTLYSVPLPQLHSQN*LKVDAF Trigger: AAAGGCGTCAACTTTGAGGCAGTTCTGAGAGTGGAG...CTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | GCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTGCCCCACAGCCCTGCAGGGCTCTTaGCAGTCCGTAGATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQQQTVSGLEPPKDPCPTALQGS*QSVDGL Trigger: CAGGCCATCTACGGACTGCAAAGAGCCCTGCAGGGC...TGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS TCA 90 bp | ACTGTTTCCTCTGAGTGGCAGTGGCGCCCTTCCCGCGGTGCAGCTTaGTGGCATGCTTGGCCACCTCCTCGTGCTCGGCAGCACTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TVSSEWQWRPSRGAA*WHAWPPPRARQHWL Trigger: TAGCCAGTGCTGCCGAGCACGAGGAGGTGGCCAAGCATGCCATCAAGCTGCACCGCGGGAAGGGCGCCACTGCCACTCAGAGGAAACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
||
| CDS CCA 90 bp | CATGACAACGCTGGAAGAGGCGCCCGCTCCGGCCTGTATGAGAGTTaGCATGACGGCAATGAACAGCCCCAGCTGCACGTCTTGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HDNAGRGARSGLYES*HDGNEQPQLHVLHH Trigger: GTGATGCAAGACGTGCAGCTGGGGCTGTTCATTGCCGTCATGCCAACTCTCATACAGGCCGGAGCGGGCGCCTCTTCCAGCGTTGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
||
| CDS-3UTR CAA 90 bp | GCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTGCCCCACATTTCAGGGCTTCCACTaGGTGTTTTTCTGCGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQQQTVSGLEPPKDPCPTFQGFH*VFFCGK Trigger: CTTGCCGCAGAAAAACACCAAGTGGAAGCCCTGAAA...TGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCAGAGAGGCGCAGCAGCAGACCGTCTCGGGACTGGAACCCCCGAAGGAGTCAGAATGTACTGGTaGTTCTGGGAGTCGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAAADRLGTGTPEGVRMYW*FWESMS Trigger: GCTCATCGACTCCCAGAACAACCAGTACATTCTGAC...TCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGCTGCTGCGCCTCTCTGCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | ACGGCTCTGATGGCATTCTTCAGTTTGTTGAGGACCACATTCTTCTaGCTCAGGAGCCCGGTGAGCCTCCTGCAGCTGTCCAGGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TALMAFFSLLRTTFF*LRSPVSLLQLSRAH Trigger: GTGGGCCCTGGACAGCTGCAGGAGGCTCACCGGGCTCCTGAGGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATGCCATCAGAGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | TCTCCGTGCTCGACTCCCCAGGACAAAGGAGAACTCGCTGACCTGTaGCAGCCCAGCGGATACGATCCACTTGATGTACTGGCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPCSTPQDKGELADL*QPSGYDPLDVLAAP Trigger: AGGAGCAGCCAGTACATCAAGTGGATCGTATCCGCTGGGCTGGCACAGGTCAGCGAGTTCTCCTTTGTCCTGGGGAGTCGAGCACGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CCA 90 bp | TCGCTGACCTGTGCCAGCCCAGCGGATACGATCCACTTGATGTACTaGCTGCTCCTCGGCAGGATGAGAGACAAGACCAGCACTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLTCASPADTIHLMY*LLLGRMRDKTSTAN Trigger: GTTGGCAGTGCTGGTCTTGTCTCTCATCCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTATCCGCTGGGCTGGCACAGGTCAGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS TCA 90 bp | GACGTCCAGCAGCTCTGTGACCGTCAGCATCAGGAAGGTGAAGGCTaGCACTCCCAGGACGAGGATCTCTTTGTTCCCCTTGCTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: DVQQLCDRQHQEGEG*HSQDEDLFVPLALQ Trigger: CTGGAGAGCAAGGGGAACAAAGAGATCCTCGTCCTGGGAGTGTCAGCCTTCACCTTCCTGATGCTGACGGTCACAGAGCTGCTGGACGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS TCA 90 bp | GATCCTTGCCCCACAGCCTGTCGTCCTCGGGTGTTGTCAGAGACTTaGGCGCCTCTCTGGTCTCGGCACACACTTGGTAATGGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DPCPTACRPRVLSET*APLWSRHTLGNGCF Trigger: AAAGCAGCCATTACCAAGTGTGTGCCGAGACCAGAGAGGCGCTCAAGTCTCTGACAACACCCGAGGACGACAGGCTGTGGGGCAAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210600.2 |
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| CDS-3UTR CAA 90 bp | AAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTTGGTTCCCAGCACTCACACCCCCAGCTGCACGTCTaGCATCACCAGCATGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGTHCSGKGPRFGSQHSHPQLHV*HHQHAK Trigger: CTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGGG...GTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GCCCCAGCTGCACGTCTTGCATCACCAGCATGCCAAGCAGCACTGTaGTGTAGTCGATGTCACCTGCTTCTTTATCACCTCGGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: APAARLASPACQAAL*CSRCHLLLYHLGHF Trigger: GAAGTGCCCGAGGTGATAAAGAAGCAGGTGACATCGACTACAGCACAGTGCTGCTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS TCA 90 bp | AGGGGTGTGCTCGACAAGGACAGACAGGTGGAAATGAAGACACTCTaGGTGGGTCTGATCCGCAGGAGGTGTCCCCACCATAAGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGVLDKDRQVEMKTL*VGLIRRRCPHHKPK Trigger: CTTTGGCTTATGGTGGGGACACCTCCTGCGGATCAGACCCACTCAGAGTGTCTTCATTTCCACCTGTCTGTCCTTGTCGAGCACACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GCCTCAAAGTTGACGCCTTTGACTGATTTATTGTCGTCGAAGGCGTaGTCCTCGATCTCCTCCTCCAGACGGTCGGCGGCTTTCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASKLTPLTDLLSSKA*SSISSSRRSAAFLT Trigger: TGTGAGGAAAGCCGCCGACCGTCTGGAGGAGGAGATCGAGGAGCACGCCTTCGACGACAATAAATCAGTCAAAGGCGTCAACTTTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 90 bp | TCTGCGCGTGGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTaGTTGTTCTGGGAGTCGATGAGCATGCTGAGACCCAGGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SARGIVESLGLVRMY*LFWESMSMLRPRPS Trigger: GGACGGCCTGGGTCTCAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | AAGGGCACTCATTGCTCTGGGAAAGGACCCAGGTTTGGTTCCCAGCACTCACACTTCGTCATATTCTGCTaGGAGCTGGCCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KGTHCSGKGPRFGSQHSHFVIFC*ELASSS Trigger: GGAGGAGGAGGCCAGCTCCAAGCAGAATATGACGAA...GTGTGAGTGCTGGGAACCAAACCTGGGTCCTTTCCCAGAGCAATGAGTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GATGTACTGGCTGCTCCTCGGCAGGATGAGAGACAAGACCAGCACTaGCAACACAAACTTCATGATGACCACGGACAGGGTGAGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: DVLAAPRQDERQDQH*QHKLHDDHGQGEEH Trigger: GTGTTCCTCACCCTGTCCGTGGTCATCATGAAGTTTGTGTTGGCAGTGCTGGTCTTGTCTCTCATCCTGCCGAGGAGCAGCCAGTACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | GATGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCATTGACTGCTCTTCTGAAGGCCTCCAGCCGCTGCTaGCTGCTCTCTTTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGAGEMAQWLRALTALLKASSRC*LLSFML Trigger: CAACATGAAAGAGAGCAGCAAGCAGCGGCTGGAGGC...CTTCAGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATCTCTCCAGCCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GGACAGCATCCCTATGGTCACGATGTCCTTTATGAAGTGGTGGTCTaGGCGTGGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GQHPYGHDVLYEVVV*AWDSRISGLGQNVL Trigger: CAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAAGGACATCGTGACCATAGGGATGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GGCAGGATGAGAGACAAGACCAGCACTGCCAACACAAACTATGGATaGGAAGAAGATGATGGCCAGGAAGTCACGGATAGGCTCGATGTA | + |
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Preference number: 5 (lower is better) Translates to: GRMRDKTSTANTNYG*EEDDGQEVTDRLDV Trigger: TACATCGAGCCTATCCGTGACTTCCTGGCCATCATCTTCTTCGCATCCATAGTTTGTGTTGGCAGTGCTGGTCTTGTCTCTCATCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210600.2 |
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| CDS CCA 90 bp | CCACGTCTCTGTAGTCGCCCTGCAGGGCTCTTTGCAGTCCGTAGATaGCCTGGAAGATCGAATTTTCACTTTCATTCAGCTCTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRLCSRPAGLFAVRR*PGRSNFHFHSALSG Trigger: TCCAGAAAGAGCTGAATGAAAGTGAAAATTCGATCTTCCAGGCCATCTACGGACTGCAAAGAGCCCTGCAGGGCGACTACAGAGACGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | GGTGGCTCACAACCACTCATAATGAGATCTGACACCCTCTTCTGGTGTGTCTTAAGGACGAGGATCTCTTaGTTCCCCTTGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSQPLIMRSDTLFWCVLRTRIS*FPLLSR Trigger: CCTGGAGAGCAAGGGGAACAAAGAGATCCTCGTCCT...TAAGACACACCAGAAGAGGGTGTCAGATCTCATTATGAGTGGTTGTGAGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 90 bp | GACGGTCGGCGGCTTTCCTCACATCTTCGAGGATCTCGTCAAGCATaGAGAGACTCTTGTTTTGATGTTGCATGTTTTTCAGGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: DGRRLSSHLRGSRQA*RDSCFDVACFSGLP Trigger: TGGAAGCCCTGAAAAACATGCAACATCAAAACAAGAGTCTCTCCATGCTTGACGAGATCCTCGAAGATGTGAGGAAAGCCGCCGACCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 90 bp | CATCCCTATGGTCACGATGTCCTTTATGAAGTGGTGGTCTGCGCGTaGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPYGHDVLYEVVVCA*DSRISGLGQNVLVV Trigger: AACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAAGGACATCGTGACCATAGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 90 bp | GAATTTTCACTTTCATTCAGCTCTTTCTGGAAAATCTCGAATGTGTaGACCTGGAAGAGCTTCTCCTCGCCCGAAAGGCTGGTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EFSLSFSSFWKISNV*TWKSFSSPERLVSF Trigger: GAAGGACACCAGCCTTTCGGGCGAGGAGAAGCTCTTCCAGGTGCACACATTCGAGATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | ATATGCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGAGCTTGATGGCATGCTaGGCCACCTCCTCGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ICTHKIHNHTLYSVPLPQSLMAC*ATSSCS Trigger: CGAGCACGAGGAGGTGGCCAAGCATGCCATCAAGCT...CTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | CATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTGCGGATACGATCCACTaGATGTACTGGCTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HNHTLYSVPLPQHLWSICADTIH*MYWLLL Trigger: GAGGAGCAGCCAGTACATCAAGTGGATCGTATCCGC...ACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | GCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTGGTCTCGGCACACACTaGGTAATGGCTGCTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: AHIKYIITPYTLSLYLSIGLGTH*VMAAFH Trigger: GTGGAAAGCAGCCATTACCAAGTGTGTGCCGAGACC...AATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | TCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTCCAGCTCTGAAAACCAGTAGAACTGCCTCAAAGTaGACGCCTTTGACTGATTTA | + |
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Preference number: 5 (lower is better) Translates to: SVPLPQHLWSICPALKTSRTASK*TPLTDL Trigger: TAAATCAGTCAAAGGCGTCAACTTTGAGGCAGTTCT...ACTGGTTTTCAGAGCTGGACAAATTGACCATAAATGCTGAGGTAGAGGGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | TGGGTTAATTACATTAATTATAAACAAGCCCCTGGAACTGGGCTGTCTGCCCTCGGAGAGACTCTTGTTTaGATGTTGCATGTTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: WVNYINYKQAPGTGLSALGETLV*MLHVFQ Trigger: CTGAAAAACATGCAACATCAAAACAAGAGTCTCTCC...GAGGGCAGACAGCCCAGTTCCAGGGGCTTGTTTATAATTAATGTAATTAACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | CATAATCACACCTTATACTCTGTCCCTCTACCTCAGCATTTATGGTCAATTTGTGTAGAATCTCTGGGCTaGGTCAGAATGTACTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HNHTLYSVPLPQHLWSICVESLG*VRMYWL Trigger: CAACCAGTACATTCTGACCAAGCCCAGAGATTCTAC...ACAAATTGACCATAAATGCTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS-3UTR CAA 90 bp | ATATGCACACATAAAATACATAATCACACCTTATACTCTGTCCCTCTACCTCAGACTCTTGTTTTGATGTaGCATGTTTTTCAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICTHKIHNHTLYSVPLPQTLVLM*HVFQGF Trigger: GAAGCCCTGAAAAACATGCAACATCAAAACAAGAGT...CTGAGGTAGAGGGACAGAGTATAAGGTGTGATTATGTATTTTATGTGTGCATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | GCAGTGGCGCCCTTCCCGCGGTGCAGCTTGATGGCATaGTTGGCCACCTCCTCGTGCTCGGCAGCACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVAPFPRCSLMA*LATSSCSAALA Trigger: AGCCAGTGCTGCCGAGCACGAGGAGGTGGCCAAGCATGCCATCAAGCTGCACCGCGGGAAGGGCGCCACTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS TCA 72 bp | TCTGAGTGGCAGTGGCGCCCTTCCCGCGGTGCAGCTTaGTGGCATGCTTGGCCACCTCCTCGTGCTCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SEWQWRPSRGAA*WHAWPPPRARQ Trigger: CTGCCGAGCACGAGGAGGTGGCCAAGCATGCCATCAAGCTGCACCGCGGGAAGGGCGCCACTGCCACTCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | GTGGCGCCCTTCCCGCGGTGCAGCTTGATGGCATGCTaGGCCACCTCCTCGTGCTCGGCAGCACTGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: VAPFPRCSLMAC*ATSSCSAALAI Trigger: GATAGCCAGTGCTGCCGAGCACGAGGAGGTGGCCAAGCATGCCATCAAGCTGCACCGCGGGAAGGGCGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | CAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTTaGCCCACAGCCTGTCGTCCTCGGGTGTTGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QTVSGLEPPKDP*PTACRPRVLSE Trigger: CTCTGACAACACCCGAGGACGACAGGCTGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210600.2 |
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| CDS CCA 72 bp | GCTGGAAGAGGCGCCCGCTCCGGCCTGTATGAGAGTTaGCATGACGGCAATGAACAGCCCCAGCTGCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGRGARSGLYES*HDGNEQPQLHV Trigger: GACGTGCAGCTGGGGCTGTTCATTGCCGTCATGCCAACTCTCATACAGGCCGGAGCGGGCGCCTCTTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | GCAGACCGTCTCGGGACTGGAACCCCCGAAGGATCCTaGCCCCACAGCCTGTCGTCCTCGGGTGTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ADRLGTGTPEGS*PHSLSSSGVVR Trigger: TCTGACAACACCCGAGGACGACAGGCTGTGGGGCAAGGATCCTTCGGGGGTTCCAGTCCCGAGACGGTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210600.2 |
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| CDS GCA 72 bp | CCCAGGCCGTCCTCCACCTCCCGCTTCGTCATATTCTaGTTGGAGCTGGCCTCCTCCTCCTCCACTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRPSSTSRFVIF*LELASSSSTLR Trigger: TCTGAGAGTGGAGGAGGAGGAGGCCAGCTCCAAGCAGAATATGACGAAGCGGGAGGTGGAGGACGGCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | GAGGTACACCTCTCTGGAGAGGATGCCTGCTCTCCGTaGTCGACTCCCCAGGACAAAGGAGAACTCGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVHLSGEDACSP*STPQDKGELAD Trigger: GTCAGCGAGTTCTCCTTTGTCCTGGGGAGTCGAGCACGGAGAGCAGGCATCCTCTCCAGAGAGGTGTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CAA 72 bp | AGGCCGTCCTCCACCTCCCGCTTCGTCATATTCTGCTaGGAGCTGGCCTCCTCCTCCTCCACTCTCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSTSRFVIFC*ELASSSSTLRT Trigger: AGTTCTGAGAGTGGAGGAGGAGGAGGCCAGCTCCAAGCAGAATATGACGAAGCGGGAGGTGGAGGACGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | TCGCTGACCTGTGCCAGCCCAGCGGATACGATCCACTaGATGTACTGGCTGCTCCTCGGCAGGATGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLTCASPADTIH*MYWLLLGRMRD Trigger: GTCTCTCATCCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTATCCGCTGGGCTGGCACAGGTCAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CAA 90 bp | AAGGAGAACTCGCTGACCTGTGCCAGCCCAGCGGATACGATCCACTaGATGTACTGGCTGCTCCTCGGCAGGATGAGAGACAAGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KENSLTCASPADTIH*MYWLLLGRMRDKTS Trigger: GCTGGTCTTGTCTCTCATCCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTATCCGCTGGGCTGGCACAGGTCAGCGAGTTCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS TCA 72 bp | CCCACAGCCTGTCGTCCTCGGGTGTTGTCAGAGACTTaGGCGCCTCTCTGGTCTCGGCACACACTTGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: PTACRPRVLSET*APLWSRHTLGN Trigger: ATTACCAAGTGTGTGCCGAGACCAGAGAGGCGCTCAAGTCTCTGACAACACCCGAGGACGACAGGCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210600.2 |
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| CDS CCA 72 bp | TGGCATGCTTGGCCACCTCCTCGTGCTCGGCAGCACTaGCTATCAGGTGAAAGAAGGGAAGCAGCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WHAWPPPRARQH*LSGERREAASR Trigger: TCTGGATGCTGCTTCCCTTCTTTCACCTGATAGCCAGTGCTGCCGAGCACGAGGAGGTGGCCAAGCATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | TGTGCCAGCCCAGCGGATACGATCCACTTGATGTACTaGCTGCTCCTCGGCAGGATGAGAGACAAGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CASPADTIHLMY*LLLGRMRDKTS Trigger: GCTGGTCTTGTCTCTCATCCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTATCCGCTGGGCTGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CAA 72 bp | CAGAGACTTGAGCGCCTCTCTGGTCTCGGCACACACTaGGTAATGGCTGCTTTCCACAGCACTGGGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QRLERLSGLGTH*VMAAFHSTGAS Trigger: ACTCGCCCCAGTGCTGTGGAAAGCAGCCATTACCAAGTGTGTGCCGAGACCAGAGAGGCGCTCAAGTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CAA 90 bp | AGGCTGGTGTCCTTCTCCACGGCTCTGATGGCATTCTTCAGTTTGTaGAGGACCACATTCTTCTGCCTCAGGAGCCCGGTGAGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLVSFSTALMAFFSL*RTTFFCLRSPVSLL Trigger: CAGGAGGCTCACCGGGCTCCTGAGGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATGCCATCAGAGCCGTGGAGAAGGACACCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 90 bp | GCGCGTGGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTGGTaGTTCTGGGAGTCGATGAGCATGCTGAGACCCAGGCCGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARGIVESLGLVRMYW*FWESMSMLRPRPSS Trigger: GGAGGACGGCCTGGGTCTCAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | TCCTTAATGGCAGCCTCCCTCAGAGCCTCCAGCCGCTaGTTGCTGCTCTCTTTCATGTTGACCACGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLMAASLRASSR*LLLSFMLTTSL Trigger: CAGAGACGTGGTCAACATGAAAGAGAGCAGCAAGCAGCGGCTGGAGGCTCTGAGGGAGGCTGCCATTAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | TTGACGCCTTTGACTGATTTATTGTCGTCGAAGGCGTaGTCCTCGATCTCCTCCTCCAGACGGTCGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTPLTDLLSSKA*SSISSSRRSAA Trigger: AGCCGCCGACCGTCTGGAGGAGGAGATCGAGGAGCACGCCTTCGACGACAATAAATCAGTCAAAGGCGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | TGGCATGACGGCAATGAACAGCCCCAGCTGCACGTCTaGCATCACCAGCATGCCAAGCAGCACTGTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WHDGNEQPQLHV*HHQHAKQHCAV Trigger: TACAGCACAGTGCTGCTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGGGCTGTTCATTGCCGTCATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | GATGTAAGTCATGATCTCCTCGGTGACCATGTGCCCTaGGGAAGAGACCAGCGCTCCAGCCAGGAAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: DVSHDLLGDHVP*GRDQRSSQEAS Trigger: GGATGCTTCCTGGCTGGAGCGCTGGTCTCTTCCCAAGGGCACATGGTCACCGAGGAGATCATGACTTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS CAA 90 bp | GATAGGCTCGATGTAAGTCATGATCTCCTCGGTGACCATGTGCCCTaGGGAAGAGACCAGCGCTCCAGCCAGGAAGCATCCAAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: DRLDVSHDLLGDHVP*GRDQRSSQEASKLH Trigger: ATGGAGCTTGGATGCTTCCTGGCTGGAGCGCTGGTCTCTTCCCAAGGGCACATGGTCACCGAGGAGATCATGACTTACATCGAGCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS TCA 72 bp | CTCGACAAGGACAGACAGGTGGAAATGAAGACACTCTaGGTGGGTCTGATCCGCAGGAGGTGTCCCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: LDKDRQVEMKTL*VGLIRRRCPHH Trigger: ATGGTGGGGACACCTCCTGCGGATCAGACCCACTCAGAGTGTCTTCATTTCCACCTGTCTGTCCTTGTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS TCA 72 bp | CAGCTCTGTGACCGTCAGCATCAGGAAGGTGAAGGCTaGCACTCCCAGGACGAGGATCTCTTTGTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QLCDRQHQEGEG*HSQDEDLFVPL Trigger: AAGGGGAACAAAGAGATCCTCGTCCTGGGAGTGTCAGCCTTCACCTTCCTGATGCTGACGGTCACAGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045229.7 ENSMUST00000210600.2 |
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| CDS GCA 72 bp | ATGGCATTCTTCAGTTTGTTGAGGACCACATTCTTCTaGCTCAGGAGCCCGGTGAGCCTCCTGCAGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: MAFFSLLRTTFF*LRSPVSLLQLS Trigger: GGACAGCTGCAGGAGGCTCACCGGGCTCCTGAGGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | ATGAGAGTTGGCATGACGGCAATGAACAGCCCCAGCTaGACGTCTTGCATCACCAGCATGCCAAGCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: MRVGMTAMNSPS*TSCITSMPSST Trigger: AGTGCTGCTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGGGCTGTTCATTGCCGTCATGCCAACTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | GCTGCTCCTCGGCAGGATGAGAGACAAGACCAGCACTaGCAACACAAACTTCATGATGACCACGGACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: AAPRQDERQDQH*QHKLHDDHGQG Trigger: ACCCTGTCCGTGGTCATCATGAAGTTTGTGTTGGCAGTGCTGGTCTTGTCTCTCATCCTGCCGAGGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | GAATCTCTGGGCTTGGTCAGAATGTACTGGTTGTTCTaGGAGTCGATGAGCATGCTGAGACCCAGGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ESLGLVRMYWLF*ESMSMLRPRPS Trigger: GGACGGCCTGGGTCTCAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 90 bp | TATGAGAGTTGGCATGACGGCAATGAACAGCCCCAGCTGCACGTCTaGCATCACCAGCATGCCAAGCAGCACTGTGCTGTAGTCGATGTC | + |
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Preference number: 6 (lower is better) Translates to: YESWHDGNEQPQLHV*HHQHAKQHCAVVDV Trigger: GACATCGACTACAGCACAGTGCTGCTTGGCATGCTGGTGATGCAAGACGTGCAGCTGGGGCTGTTCATTGCCGTCATGCCAACTCTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | TCCTTCTCCACGGCTCTGATGGCATTCTTCAGTTTGTaGAGGACCACATTCTTCTGCCTCAGGAGCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SFSTALMAFFSL*RTTFFCLRSPV Trigger: CACCGGGCTCCTGAGGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATGCCATCAGAGCCGTGGAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | GTGTCCTTCTCCACGGCTCTGATGGCATTCTTCAGTTaGTTGAGGACCACATTCTTCTGCCTCAGGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VSFSTALMAFFS*LRTTFFCLRSP Trigger: CGGGCTCCTGAGGCAGAAGAATGTGGTCCTCAACAAACTGAAGAATGCCATCAGAGCCGTGGAGAAGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS TCA 72 bp | TTTGTCCAATCAGAAACAGTATGCGCAATACTTCCATaGCAACGCTGGAAGAGGCGCCCGCTCCGGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: FVQSETVCAILP*QRWKRRPLRPV Trigger: TACAGGCCGGAGCGGGCGCCTCTTCCAGCGTTGTCATGGAAGTATTGCGCATACTGTTTCTGATTGGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | GCACGTCTTGCATCACCAGCATGCCAAGCAGCACTGTaGTGTAGTCGATGTCACCTGCTTCTTTATCACCTC | + |
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Preference number: 6 (lower is better) Translates to: ARLASPACQAAL*CSRCHLLLYHL Trigger: GAGGTGATAAAGAAGCAGGTGACATCGACTACAGCACAGTGCTGCTTGGCATGCTGGTGATGCAAGACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | GACAGCATCCCTATGGTCACGATGTCCTTTATGAAGTaGTGGTCTGCGCGTGGGATAGTAGAATCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSIPMVTMSFMK*WSARGIVESLG Trigger: GCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAAGGACATCGTGACCATAGGGATGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | TGGTGGTCTGCGCGTGGGATAGTAGAATCTCTGGGCTaGGTCAGAATGTACTGGTTGTTCTGGGAGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: WWSARGIVESLG*VRMYWLFWESM Trigger: CATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | GGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTaGTTGTTCTGGGAGTCGATGAGCATGCTGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: GIVESLGLVRMY*LFWESMSMLRP Trigger: GGGTCTCAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | AGCATCCCTATGGTCACGATGTCCTTTATGAAGTGGTaGTCTGCGCGTGGGATAGTAGAATCTCTGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SIPMVTMSFMKW*SARGIVESLGL Trigger: CAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAAGGACATCGTGACCATAGGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | GGAACACCAGCACCGTCAACTCATAGATCACAAAGGTaGGGAACACATGGAGCCCTATGGATGCGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GTPAPSTHRSQR*GTHGALWMRRR Trigger: TCTTCTTCGCATCCATAGGGCTCCATGTGTTCCCCACCTTTGTGATCTATGAGTTGACGGTGCTGGTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | AGAACTGCCTCAAAGTTGACGCCTTTGACTGATTTATaGTCGTCGAAGGCGTGCTCCTCGATCTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTASKLTPLTDL*SSKACSSISSS Trigger: GGAGGAGGAGATCGAGGAGCACGCCTTCGACGACAATAAATCAGTCAAAGGCGTCAACTTTGAGGCAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 90 bp | TTTATGAAGTGGTGGTCTGCGCGTGGGATAGTAGAATCTCTGGGCTaGGTCAGAATGTACTGGTTGTTCTGGGAGTCGATGAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: FMKWWSARGIVESLG*VRMYWLFWESMSML Trigger: CAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | TGTAGTCGCCCTGCAGGGCTCTTTGCAGTCCGTAGATaGCCTGGAAGATCGAATTTTCACTTTCATTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CSRPAGLFAVRR*PGRSNFHFHSA Trigger: AGCTGAATGAAAGTGAAAATTCGATCTTCCAGGCCATCTACGGACTGCAAAGAGCCCTGCAGGGCGACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | GGTCACGATGTCCTTTATGAAGTGGTGGTCTGCGCGTaGGATAGTAGAATCTCTGGGCTTGGTCAGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: GHDVLYEVVVCA*DSRISGLGQNV Trigger: TACATTCTGACCAAGCCCAGAGATTCTACTATCCCACGCGCAGACCACCACTTCATAAAGGACATCGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | ATAGTAGAATCTCTGGGCTTGGTCAGAATGTACTGGTaGTTCTGGGAGTCGATGAGCATGCTGAGACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IVESLGLVRMYW*FWESMSMLRPR Trigger: CCTGGGTCTCAGCATGCTCATCGACTCCCAGAACAACCAGTACATTCTGACCAAGCCCAGAGATTCTACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 90 bp | CTCTTTCATGTTGACCACGTCTCTGTAGTCGCCCTGCAGGGCTCTTaGCAGTCCGTAGATGGCCTGGAAGATCGAATTTTCACTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LFHVDHVSVVALQGS*QSVDGLEDRIFTFI Trigger: AATGAAAGTGAAAATTCGATCTTCCAGGCCATCTACGGACTGCAAAGAGCCCTGCAGGGCGACTACAGAGACGTGGTCAACATGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 90 bp | CCTCACATCTTCGAGGATCTCGTCAAGCATGGAGAGACTCTTGTTTaGATGTTGCATGTTTTTCAGGGCTTCCACTTGGTGTTTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PHIFEDLVKHGETLV*MLHVFQGFHLVFFC Trigger: GCAGAAAAACACCAAGTGGAAGCCCTGAAAAACATGCAACATCAAAACAAGAGTCTCTCCATGCTTGACGAGATCCTCGAAGATGTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS GCA 72 bp | TTGCATGTTTTTCAGGGCTTCCACTTGGTGTTTTTCTaGGGCAAGAAGTTCCACATACTCTGTCTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHVFQGFHLVFF*GKKFHILCLLL Trigger: AAGGAGGAGACAGAGTATGTGGAACTTCTTGCCGCAGAAAAACACCAAGTGGAAGCCCTGAAAAACATGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CAA 72 bp | TTCGAGGATCTCGTCAAGCATGGAGAGACTCTTGTTTaGATGTTGCATGTTTTTCAGGGCTTCCACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FEDLVKHGETLV*MLHVFQGFHLV Trigger: CACCAAGTGGAAGCCCTGAAAAACATGCAACATCAAAACAAGAGTCTCTCCATGCTTGACGAGATCCTCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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| CDS CCA 72 bp | CGGCTTTCCTCACATCTTCGAGGATCTCGTCAAGCATaGAGAGACTCTTGTTTTGATGTTGCATGTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RLSSHLRGSRQA*RDSCFDVACFS Trigger: TGAAAAACATGCAACATCAAAACAAGAGTCTCTCCATGCTTGACGAGATCCTCGAAGATGTGAGGAAAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045229.7 |
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